Functional expression of PEPT2 and its regulation in alveolar epithelial cells
|
|
- Anastasia Sherman
- 5 years ago
- Views:
Transcription
1 Workshop on Drug Transporters in the Lungs TCD, Dublin, IRL, Sept , 216 Functional expression of PEPT2 and its regulation in alveolar epithelial cells Mikihisa Takano, Ph.D. Graduate School of Biomedical & Health Sciences, Hiroshima University, Japan 1 Functional expression of PEPT2 and its regulation in alveolar epithelial cells 1) Rat primary cultured alveolar epithelial cells (Type II cells, Type I-like cells) 2) Human distal lung epithelial cell line NCI-H441 1
2 Functional expression of PEPT2 and its regulation in alveolar epithelial cells 1. Study with rat primary cultured alveolar epithelial cells (Type II cells, Type I-like cells) Expression and function of PEPT2 during transdifferentiation of primary cultured alveolar epithelial cells Characteristics of primary cultured alveolar epithelial cells (type II and type I-like cells) we have been using Type II cells (5 x 1 6 cells/35 mm dish/2 days) Phase-contrast micrographs Confocal laser scanning micrographs (CLSM) of lamellar bodies in type II cells Type I-like cells (2 x 1 6 cells/35 mm dish/6 days) LysoTracker Red Nile Red 2
3 Immunostaining of ABCA3 and caveolin-1 protein in primary cultured rat alveolar epithelial cells Type II cell Type I-like cell ABCA3 (type II cell marker) Caveolin-1 (type I cell marker) Change in mrna expression profile during transdifferentiation of type II cells into type I-like cells Real-time PCR and Microarray analyses Type II Type I-like The expression of about 12 mrnas increased more than 2-fold and decreased to less than 1/2, respectively, along with transdifferentiation (total probes 35). In both methods, we observed that the expression level of many mrnas changed drastically during transdifferentiation. For example, in Real-time PCR analysis, type I marker mrnas such as caveolin-1 increased markedly, while type II marker mrnas such as CINC-1 decreased markedly after transdifferentiation. Primary cultured alveolar epithelial cells we have been using have type II and type I cell phenotype, respectively. 3
4 Background When we started this study, it was reported that PEPT2 was expressed in type II cells using in situ hybridization and immunohistochemistry, and that PEPT2 in type II cells could transport a fluorophore conjugated dipeptide derivative under ex vivo conditions (Groneberg et al., 21, 22 ). However, the relationship between the transdifferentiation of alveolar epithelial cells and functional expression of PEPT2 was not clear. In addition, there was little information concerning the transport characteristics of PEPT2 at the alveolar cell level. Therefore, using these primary cultured alveolar type II and type I-like epithelial cells, we studied and compared the expression and function of PEPT2. Expression of PEPT2 mrna during transdifferentiation of alveolar epithelial cells Transport function of PEPT2 during transdifferentiation of alveolar epithelial cells (Gly-Sar uptake) Expression of Pept2 mrna (% of Day ) Day Day 1 Day 2 Day 6 [ 3 H]Gly-Sar uptake (nmol/mg protein/hr) Control Cefadroxil Day 1 Day 2 Day 4 Day 6 The expression and function of PEPT2 would decrease during transdifferentiation of alveolar epithelial cells. 4
5 Expression of PEPT2 protein in type II and type I-like alveolar epithelial cells Time-course Effect of extracellular ph on glycylsarcosine (Gly-Sar) uptake in alveolar epithelial cells 1.6 [ 3 H] Gly-Sar uptake (nmol/mg protein) ph = Time (min) ph = 7.4 type II type I-like ph = 6. ph = 7.4 5
6 ph-dependence of Gly-Sar uptake in alveolar type II cells Concentration-dependent effect of cefadroxil on Gly-Sar uptake in alveolar epithelial cells (ph 6.) 3. type II.3 type I-like [ 3 H] Gly-Sar uptake (nmol/mg protein) IC5 value = 4.3 μm Cefadroxil ( M) Cefadroxil ( M) P <.1 6
7 Concentration-dependence of Gly-Sar uptake in alveolar type II cells (ph 6.) Km = 72. μm Summary 1 PEPT2 is functionally expressed in primary cultured alveolar type II epithelial cells, but the expression decreases along with transdifferentiation, and PEPT2 is almost completely lost in type I cells. So, primary cultured type II cells are a good in-vitro model to study alveolar PEPT2 function. However, they are not suitable for long term study, because of phenotype change during culture. Therefore, alveolar epithelial cell line naturally and stably expressing PEPT2 would be useful to study the function, expression, and its regulation. 7
8 Gly-Sar uptake in widely used alveolar epithelial cell lines, RLE-6TN and A549 Effect of extracellular ph on Gly-Sar uptake in RLE 6TN and A549 cells Effect of cefadroxil on Gly-Sar uptake in RLE 6TN and A549 cells.8 RLE-6TN cells.15 A549 cells [ 3 H] Gly-Sar uptake (nmol/mg protein) Cefadroxil ( M) Cefadroxil ( M) PEPT2 is not functionally expressed in RLE-6TN and A549 cells, and these cells are not good in-vitro models to study alveolar PEPT2. 8
9 Functional expression of PEPT2 and its regulation in alveolar epithelial cells 2. The expression and function of PEPT2 in human distal lung epithelial cell line NCI-H441 Morphology of H441 cell monolayers and lamellar body formation in H441 (day 13) and A549 cells Epithelial-like morphology H441 H441 Dome-like structure H441 A549 9
10 The mrna expression of type II cell markers (SP-C and ABCA3), PEPT2 and PEPT1 in H441 cells SP-C Expression (% of day 7) ABCA3 Expression (% of day 7) day 7 day 9 day 11 day 13 day 7 day 9 day 11 day 13 PEPT2 Expression (% of day 7) PEPT1 (expected size) PEPT2 day 7 day 9 day 11 day 13 PEPT2 PEPT1 H441 cells would have alveolar type II cell-like phenotype. The expression of PEPT2 protein in H441 and A549 cells Immunostaining H441 A549 Western Blotting 1
11 Effect of cefadroxil on Gly-Sar uptake in H441 cells [ 3 H]-Gly-Sar uptake (pmol/mg protein) [ 3 H]-Gly-Sar uptake (pmol/mg protein) o C Time (min) 4 o C Time (min) [ 3 H]-Gly-Sar uptake (% of control) Concentration dependence * * * * Conc. of cefadroxil (mm) : Control : Cefadroxil ph-dependence of cefadroxil-sensitive (PEPT2- mediated) Gly-Sar uptake in H441 and A549 cells H441 A549 11
12 Concentration-dependence of Gly-Sar uptake in H441 cells (ph 6.5) Km = μm TEER and PEPT2-mediated transcellular transport of cephalexin across H441 cell monolayers TEER Transepithelial transport (Cefadroxil-sensitive) A-to-B B-to-A TEER values of A549 and RLE-6TN cell monolayers were much lower than H441 cells, 31 and 78 ohm cm 2, respectively. 12
13 Summary 2 PEPT2 is functionally expressed in H441 cells, making the cell line a good in-vitro model to study PEPT2 function and its regulation in human distal lung. Especially, H441 cells form electrically tight monolayers, and therefore can be used for transcellular transport studies. PEPT2 and innate immune response In primary human upper airway epithelial culture cells, it is reported that γ-ie-dap (γ-d-glutamyl-mesodiaminopimelic acid), a bacterial dipeptide, is taken up by PEPT2, and induces the innate immune response in the NOD1 (nucleotide-binding oligomerization domain 1) - -dependent manner (Peter W. Swaan et al., Am J Respir Cell Mol Biol Vol 39. pp , 28). 13
14 Possible induction of innate immune response by γ-ie-dap in alveolar type II cells Preliminary data Expression of NOD1 mrna in H441 cells 14
15 Preliminary data Effect of γ-ie-dap on mrna expression of IL-6 and IL-8 in H441 cells IL-6 IL-8 % of control γ-ie-dap(-) γ-ie-dap(+) % of control γ-ie-dap(-) γ-ie-dap(+) 4 hr 24 hr 4 hr 24 hr Summary 3 (Preliminary) PEPT2- and NOD1-dependent immune response may occur in alveolar type II epithelial cells, which may serve as one of the hostdefense systems in the distal lungs. 15
Supplementary Figure 1. Markedly decreased numbers of marginal zone B cells in DOCK8 mutant mice Supplementary Figure 2.
Supplementary Figure 1. Markedly decreased numbers of marginal zone B cells in DOCK8 mutant mice. Percentage of marginal zone B cells in the spleen of wild-type mice (+/+), mice homozygous for cpm or pri
More informationSupplementary Figure 1.
Supplementary Figure 1. Characterisation of IHG-1 overexpressing and knockdown cell lines. (A) Total cellular RNA was prepared from HeLa cells stably overexpressing IHG-1 or mts-ihg-1. IHG-1 mrna was quantified
More informationSupplementary Figure 1: To test the role of mir-17~92 in orthologous genetic model of ADPKD, we generated Ksp/Cre;Pkd1 F/F (Pkd1-KO) and Ksp/Cre;Pkd1
Supplementary Figure 1: To test the role of mir-17~92 in orthologous genetic model of ADPKD, we generated Ksp/Cre;Pkd1 F/F (Pkd1-KO) and Ksp/Cre;Pkd1 F/F ;mir-17~92 F/F (Pkd1-miR-17~92KO) mice. (A) Q-PCR
More informationProteomics. Areas of Interest
Introduction to BioMEMS & Medical Microdevices Proteomics and Protein Microarrays Companion lecture to the textbook: Fundamentals of BioMEMS and Medical Microdevices, by Prof., http://saliterman.umn.edu/
More informationSupplementary Materials for
www.sciencesignaling.org/cgi/content/full/7/345/ra91/dc1 Supplementary Materials for TGF-β induced epithelial-to-mesenchymal transition proceeds through stepwise activation of multiple feedback loops Jingyu
More informationSUPPLEMENTARY INFORMATION
GP2 Type I-piliated bacteria FAE M cell M cell pocket idc T cell mdc Generation of antigenspecific T cells Induction of antigen-specific mucosal immune response Supplementary Figure 1 Schematic diagram
More informationData Sheet. Azide Cy5 RNA T7 Transcription Kit
Cat. No. Size 1. Description PP-501-Cy5 10 reactions à 40 µl For in vitro use only Quality guaranteed for 12 months Store all components at -20 C. Avoid freeze and thaw cycles. DBCO-Sulfo-Cy5 must be stored
More information10/2/2015. Chapter 4. Determination and Differentiation. Neuroanatomical Diversity
Chapter 4 Determination and Differentiation Neuroanatomical Diversity 1 Neurochemical diversity: another important aspect of neuronal fate Neurotransmitters and their receptors Excitatory Glutamate Acetylcholine
More informationGenetically Modified Human Renal Proximal Tubule Epithelial Cells (RPTEC/TERT1) A New Model for Drug Toxicity Studies
Genetically Modified Human Renal Proximal Tubule Epithelial Cells (RPTEC/TERT1) A New Model for Drug Toxicity Studies Chaozhong Zou, Ph.D. Senior Scientist, ATCC About ATCC Founded in 1925, ATCC is a non-profit
More informationMitochondrial Dynamics Is a Distinguishing Feature of Skeletal Muscle Fiber Types and Regulates Organellar Compartmentalization
Cell Metabolism Supplemental Information Mitochondrial Dynamics Is a Distinguishing Feature of Skeletal Muscle Fiber Types and Regulates Organellar Compartmentalization Prashant Mishra, Grigor Varuzhanyan,
More informationTRANSCRIPTOMICS. (or the analysis of the transcriptome) Mario Cáceres. Main objectives of genomics. Determine the entire DNA sequence of an organism
TRANSCRIPTOMICS (or the analysis of the transcriptome) Mario Cáceres Main objectives of genomics Determine the entire DNA sequence of an organism Identify and annotate the complete set of genes encoded
More informationNMR study of complexes between low molecular mass inhibitors and the West Nile virus NS2B-NS3 protease
University of Wollongong Research Online Faculty of Science - Papers (Archive) Faculty of Science, Medicine and Health 2009 NMR study of complexes between low molecular mass inhibitors and the West Nile
More informationDOI: 10.1038/ncb2819 Gαi3 / Actin / Acetylated Tubulin Gαi3 / Actin / Acetylated Tubulin a a Gαi3 a Actin Gαi3 WT Gαi3 WT Gαi3 WT b b Gαi3 b Actin Gαi3 KO Gαi3 KO Gαi3 KO # # Figure S1 Loss of protein
More informationCells to Tissues. Peter Takizawa Department of Cell Biology
Cells to Tissues Peter Takizawa Department of Cell Biology From one cell to ensembles of cells. Multicellular organisms require individual cells to work together in functional groups. This means cells
More informationRatiometric Fluorescence Imaging of Cellular Glutathione
Supporting Information for: Ratiometric Fluorescence Imaging of Cellular Glutathione Gun-Joong Kim, Kiwon Lee, Hyockman Kwon, and Hae-Jo Kim, * Department of Chemistry, and Department of Bioscience and
More informationSupplementary Information
Supplementary Information MAP2/Hoechst Hyp.-AP ph 6.5 Hyp.-SD ph 7.2 Norm.-SD ph 7.2 Supplementary Figure 1. Mitochondrial elongation in cortical neurons by acidosis. Representative images of neuronal
More informationA homo-dimer of annexin V protects against ischemia reperfusion injury in lung transplantation
A homo-dimer of annexin V protects against ischemia reperfusion injury in lung transplantation K Hashimoto, H Kim, H Oishi, M Chen, I Iskender, J Sakamoto, A Ohsumi, Z Guan, DM Hwang, TK Waddell, M Cypel,
More information13-3. Synthesis-Secretory pathway: Sort lumenal proteins, Secrete proteins, Sort membrane proteins
13-3. Synthesis-Secretory pathway: Sort lumenal proteins, Secrete proteins, Sort membrane proteins Molecular sorting: specific budding, vesicular transport, fusion 1. Why is this important? A. Form and
More informationMassachusetts Institute of Technology Harvard Medical School Brigham and Women s Hospital VA Boston Healthcare System 2.79J/3.96J/BE.
Massachusetts Institute of Technology Harvard Medical School Brigham and Women s Hospital VA Boston Healthcare System 2.79J/3.96J/BE.441/HST522J INTEGRINS I.V. Yannas, Ph.D. and M. Spector, Ph.D. Regulator
More informationTaxonomy. Content. How to determine & classify a species. Phylogeny and evolution
Taxonomy Content Why Taxonomy? How to determine & classify a species Domains versus Kingdoms Phylogeny and evolution Why Taxonomy? Classification Arrangement in groups or taxa (taxon = group) Nomenclature
More informationGeert Geeven. April 14, 2010
iction of Gene Regulatory Interactions NDNS+ Workshop April 14, 2010 Today s talk - Outline Outline Biological Background Construction of Predictors The main aim of my project is to better understand the
More informationBig Idea 3: Living systems store, retrieve, transmit and respond to information essential to life processes. Tuesday, December 27, 16
Big Idea 3: Living systems store, retrieve, transmit and respond to information essential to life processes. Enduring understanding 3.B: Expression of genetic information involves cellular and molecular
More informationOCR Biology Checklist
Topic 1. Cell level systems Video: Eukaryotic and prokaryotic cells Compare the structure of animal and plant cells. Label typical and atypical prokaryotic cells. Compare prokaryotic and eukaryotic cells.
More informationOCR Biology Checklist
Topic 1. Cell level systems Video: Eukaryotic and prokaryotic cells Compare the structure of animal and plant cells. Label typical and atypical prokaryotic cells. Compare prokaryotic and eukaryotic cells.
More informationModular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms
nature methods Modular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms Jonas Ries, Shuizi Rachel Yu, Markus Burkhardt, Michael Brand & Petra Schwille Supplementary
More informationRANK. Alternative names. Discovery. Structure. William J. Boyle* SUMMARY BACKGROUND
RANK William J. Boyle* Department of Cell Biology, Amgen, Inc., One Amgen Center Drive, Thousand Oaks, CA 91320-1799, USA * corresponding author tel: 805-447-4304, fax: 805-447-1982, e-mail: bboyle@amgen.com
More informationBiology 112 Practice Midterm Questions
Biology 112 Practice Midterm Questions 1. Identify which statement is true or false I. Bacterial cell walls prevent osmotic lysis II. All bacterial cell walls contain an LPS layer III. In a Gram stain,
More informationSUPPLEMENTARY INFORMATION
doi:10.1038/nature11419 Supplementary Figure 1 Schematic representation of innate immune signaling pathways induced by intracellular Salmonella in cultured macrophages. a, During the infection Salmonella
More informationNanoparticle Toxicity Assessment in a Bacterial Model
Nanoparticle Toxicity Assessment in a Bacterial Model Ian L. Gunsolus, Dehong Hu, Cosmin Mihai, William B. Chrisler, Samuel E. Lohse, Marco D. Torelli, Robert J. Hamers, Catherine J. Murphy, Galya Orr,
More informationFSC-W FSC-H CD4 CD62-L
Supplementary Fig. 1 a SSC-A FSC-A FSC-W FSC-H SSC-W SSC-H CD4 CD62-L b SSC-A FSC-A FSC-W FSC-A FSC-A 7-AAD FSC-A CD4 IL-9 CD4 c SSC-A FSC-A FSC-W FSC-H SSC-W SSC-H 7-AAD KI67 Annexin-V 7-AAD d I L -5
More informationRichik N. Ghosh, Linnette Grove, and Oleg Lapets ASSAY and Drug Development Technologies 2004, 2:
1 3/1/2005 A Quantitative Cell-Based High-Content Screening Assay for the Epidermal Growth Factor Receptor-Specific Activation of Mitogen-Activated Protein Kinase Richik N. Ghosh, Linnette Grove, and Oleg
More informationSupplemental Information. The Mitochondrial Fission Receptor MiD51. Requires ADP as a Cofactor
Structure, Volume 22 Supplemental Information The Mitochondrial Fission Receptor MiD51 Requires ADP as a Cofactor Oliver C. Losón, Raymond Liu, Michael E. Rome, Shuxia Meng, Jens T. Kaiser, Shu-ou Shan,
More informationT H E J O U R N A L O F C E L L B I O L O G Y
T H E J O U R N A L O F C E L L B I O L O G Y Supplemental material Breker et al., http://www.jcb.org/cgi/content/full/jcb.201301120/dc1 Figure S1. Single-cell proteomics of stress responses. (a) Using
More informationFluorescence Resonance Energy Transfer (FRET) Microscopy
Fluorescence Resonance Energy Transfer () Microscopy Mike Lorenz Optical Technology Development mlorenz@mpi-cbg.de -FLM course, May 2009 What is fluorescence? Stoke s shift Fluorescence light is always
More informationSUPPLEMENTARY INFORMATION
doi:10.1038/nature10244 a O07391_MYCAV/127-243 NLPC_HAEIN/80-181 SPR_SHIFL/79-183 P74160_SYNY3/112-245 O24914_HELPY/301-437 Q51835_PORGI/68-178 DPP6_BACSH/163-263 YKFC_BACSU/185-292 YDHO_ECOLI/153-263
More informationElectrical Properties of the Membrane
BIOE 2520 Electrical Properties of the Membrane Reading: Chapter 11 of Alberts et al. Stephen Smith, Ph.D. 433 Biotech Center shs46@pitt.edu Permeability of Lipid membrane Lipid bilayer is virtually impermeable
More informationUnder the Radar Screen: How Bugs Trick Our Immune Defenses
Under the Radar Screen: How Bugs Trick Our Immune Defenses Session 2: Phagocytosis Marie-Eve Paquet and Gijsbert Grotenbreg Whitehead Institute for Biomedical Research Salmonella Gram negative bacteria
More informationSUPPLEMENTARY INFORMATION
SUPPLEMENTARY INFORMATION doi:10.1038/nature11524 Supplementary discussion Functional analysis of the sugar porter family (SP) signature motifs. As seen in Fig. 5c, single point mutation of the conserved
More informationSUPPLEMENTARY INFORMATION
DOI: 10.1038/ncb2647 Figure S1 Other Rab GTPases do not co-localize with the ER. a, Cos-7 cells cotransfected with an ER luminal marker (either KDEL-venus or mch-kdel) and mch-tagged human Rab5 (mch-rab5,
More informationBacterial Activation of Epithelial Signaling Prof. Alice Prince
rof. Alice rince Bacterial Activation of Epithelial Signaling rof. Alice rince Columbia University New York, NY 1 Introduction Airway epithelial cells recognize bacterial components in the airway lumen
More informationExhaustive search. CS 466 Saurabh Sinha
Exhaustive search CS 466 Saurabh Sinha Agenda Two different problems Restriction mapping Motif finding Common theme: exhaustive search of solution space Reading: Chapter 4. Restriction Mapping Restriction
More informationAmersham CyDye fluors
GE Healthcare Life Sciences Amersham CyDye fluors Selection Guide Welcome to Amersham CyDye fluors Amersham CyDye fluors are versatile fluorophores designed for a broad range of applications. CyDye fluors
More informationSupplementary Figure 1. Confirmation of REF52-hE2F1p::4NLS-d4Venus reporter cells and characterization of E2F dynamics. (a) Alignment of E2F dynamics
Supplementary Figure 1. Confirmation of REF52-hE2F1p::4NLS-d4Venus reporter cells and characterization of E2F dynamics. (a) Alignment of E2F dynamics trajectories to endogenous E2F1 mrna expression. Gray
More informationAaron C. Overland, John N. Rauch, Libuse Oupicka, David M. Rock, Daniel M. Appledorn Essen BioScience Ann Arbor, Michigan, USA
Quantitative live-cell analysis for optimization of culture conditions and evaluation of cell health in human induced pluripotent stem cell-derived neurons Aaron C. Overland, John N. Rauch, Libuse Oupicka,
More informationPart 3: Introduction to Master Equation and Complex Initial Conditions in Lattice Microbes
Part 3: Introduction to Master Equation Cells: and Complex Initial Conditions in Lattice re cells Microbes en Biophysics, and UC urgh, June 6-8, 2016 rson Joseph R. Peterson and Michael J. Hallock Luthey-Schulten
More informationEvaluation of Poly (Amidoamine) Dendrimer Permeability and Transport Mechanisms across Caco-2 2 Cell Monolayers
Evaluation of Poly (Amidoamine) Dendrimer Permeability and Transport Mechanisms across Caco-2 2 Cell Monolayers Kelly Marie Kitchens Center for Nanomedicine and Cellular Delivery Department of Pharmaceutical
More informationASSESSING TRANSLATIONAL EFFICIACY THROUGH POLY(A)- TAIL PROFILING AND IN VIVO RNA SECONDARY STRUCTURE DETERMINATION
ASSESSING TRANSLATIONAL EFFICIACY THROUGH POLY(A)- TAIL PROFILING AND IN VIVO RNA SECONDARY STRUCTURE DETERMINATION Journal Club, April 15th 2014 Karl Frontzek, Institute of Neuropathology POLY(A)-TAIL
More informationSUPPLEMENTARY INFORMATION
DOI: 10.1038/ncb2362 Figure S1 CYLD and CASPASE 8 genes are co-regulated. Analysis of gene expression across 79 tissues was carried out as described previously [Ref: PMID: 18636086]. Briefly, microarray
More informationFigure 1. Identification of UGT74E2 as an IBA glycosyltransferase. (A) Relative conversion rates of different plant hormones to their glucosylated
Figure 1. Identification of UGT74E2 as an IBA glycosyltransferase. (A) Relative conversion rates of different plant hormones to their glucosylated form by recombinant UGT74E2. The naturally occurring auxin
More informationA Reduction in Intestinal Cell ph i Due to Loss of the Caenorhabditis elegans Na /H Exchanger NHX-2 Increases Life Span*
THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 278, No. 45, Issue of November 7, pp. 44657 44666, 2003 2003 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S.A. A Reduction
More informationAdvanced Topics in RNA and DNA. DNA Microarrays Aptamers
Quiz 1 Advanced Topics in RNA and DNA DNA Microarrays Aptamers 2 Quantifying mrna levels to asses protein expression 3 The DNA Microarray Experiment 4 Application of DNA Microarrays 5 Some applications
More informationCORE MOLIT ACTIVITIES at a glance
CORE MOLIT ACTIVITIES at a glance 1. Amplification of Biochemical Signals: The ELISA Test http://molit.concord.org/database/activities/248.html The shape of molecules affects the way they function. A test
More informationSupplementary Materials for
advances.sciencemag.org/cgi/content/full/4/10/eaat8797/dc1 Supplementary Materials for Single-molecule observation of nucleotide induced conformational changes in basal SecA-ATP hydrolysis Nagaraju Chada,
More informationSupplementary Materials for
www.sciencesignaling.org/cgi/content/full/6/301/ra98/dc1 Supplementary Materials for Regulation of Epithelial Morphogenesis by the G Protein Coupled Receptor Mist and Its Ligand Fog Alyssa J. Manning,
More informationAbout OMICS Group Conferences
About OMICS Group OMICS Group International is an amalgamation of Open Access publications and worldwide international science conferences and events. Established in the year 2007 with the sole aim of
More informationP. syringae and E. coli
CHAPTER 6 A comparison of the recd mutant phenotypes of P. syringae and E. coli 6.1 INTRODUCTION The RecBCD complex is essential for recombination mediated repair of double strand breaks (DSBs) of DNA
More informationMeasuring TF-DNA interactions
Measuring TF-DNA interactions How is Biological Complexity Achieved? Mediated by Transcription Factors (TFs) 2 Regulation of Gene Expression by Transcription Factors TF trans-acting factors TF TF TF TF
More informationParticle interactions in dry and suspension based formulations
Finnish Society of Physical Pharmacy, 9 th Feb 2012 Particle interactions in dry and suspension based formulations Pharmaceutical Surface Science Research Group, Department of Pharmacy and Pharmacology,
More informationBiological Concepts and Information Technology (Systems Biology)
Biological Concepts and Information Technology (Systems Biology) Janaina de Andréa Dernowsek Postdoctoral at Center for Information Technology Renato Archer Janaina.dernowsek@cti.gov.br Division of 3D
More informationIntercellular contacts at the epithelial-mesenchymal interface of the developing rat submandibular gland in vitro
/. Embryol. exp. Morph. Vol. 39, pp. 71-77, 1977 71 Printed in Great Britain Intercellular contacts at the epithelial-mesenchymal interface of the developing rat submandibular gland in vitro By LESLIE
More informationAlita Miller, PhD. Head of BioScience. April 24, 2017 ECCMID 2017 Vienna, Austria
ETX5 restoration of sulbactam activity against multidrug resistant Acinetobacter baumannii correlates with β-lactamase inhibition in vitro and in vivo Alita Miller, PhD Head of BioScience April, 07 ECCMID
More informationBMB Class 17, November 30, Single Molecule Biophysics (II)
BMB 178 2018 Class 17, November 30, 2018 15. Single Molecule Biophysics (II) New Advances in Single Molecule Techniques Atomic Force Microscopy Single Molecule Manipulation - optical traps and tweezers
More informationIllegitimate translation causes unexpected gene expression from on-target out-of-frame alleles
Illegitimate translation causes unexpected gene expression from on-target out-of-frame alleles created by CRISPR-Cas9 Shigeru Makino, Ryutaro Fukumura, Yoichi Gondo* Mutagenesis and Genomics Team, RIKEN
More informationWarm-Up. Explain how a secondary messenger is activated, and how this affects gene expression. (LO 3.22)
Warm-Up Explain how a secondary messenger is activated, and how this affects gene expression. (LO 3.22) Yesterday s Picture The first cell on Earth (approx. 3.5 billion years ago) was simple and prokaryotic,
More informationCytokinin. Fig Cytokinin needed for growth of shoot apical meristem. F Cytokinin stimulates chloroplast development in the dark
Cytokinin Abundant in young, dividing cells Shoot apical meristem Root apical meristem Synthesized in root tip, developing embryos, young leaves, fruits Transported passively via xylem into shoots from
More informationNIH Public Access Author Manuscript Ann N Y Acad Sci. Author manuscript; available in PMC 2012 April 13.
NIH Public Access Author Manuscript Published in final edited form as: Ann N Y Acad Sci. 2009 May ; 1165: 169 174. doi:10.1111/j.1749-6632.2009.04060.x. Tight Junctions and Enteropathogenic E. coli Andrew
More informationD. Combinatorial transcriptional control. Complex eukaryotic promoter
D. Combinatorial transcriptional control Complex bacterial s with multiple inputs: Complex eukaryotic [Davidson et al] 1 Mechanisms of complex transcriptional control? specific, complex protein-protein
More informationSUPPLEMENTARY INFORMATION
doi:10.1038/nature17991 Supplementary Discussion Structural comparison with E. coli EmrE The DMT superfamily includes a wide variety of transporters with 4-10 TM segments 1. Since the subfamilies of the
More informationSUPPLEMENTARY FIGURES AND TABLES AND THEIR LEGENDS. Transient infection of the zebrafish notochord triggers chronic inflammation
SUPPLEMENTARY FIGURES AND TABLES AND THEIR LEGENDS Transient infection of the zebrafish notochord triggers chronic inflammation Mai Nguyen-Chi 1,2,5, Quang Tien Phan 1,2,5, Catherine Gonzalez 1,2, Jean-François
More informationMonitoring neurite morphology and synapse formation in primary neurons for neurotoxicity assessments and drug screening
APPLICATION NOTE ArrayScan High Content Platform Monitoring neurite morphology and synapse formation in primary neurons for neurotoxicity assessments and drug screening Suk J. Hong and Richik N. Ghosh
More informationThree types of RNA polymerase in eukaryotic nuclei
Three types of RNA polymerase in eukaryotic nuclei Type Location RNA synthesized Effect of α-amanitin I Nucleolus Pre-rRNA for 18,.8 and 8S rrnas Insensitive II Nucleoplasm Pre-mRNA, some snrnas Sensitive
More informationA redundant function for the N-terminal tail of Ndc80 in kinetochore-microtubule interaction in Saccharomyces cerevisiae.
Genetics: Published Articles Ahead of Print, published on July 30, 2012 as 10.1534/genetics.112.143818 A redundant function for the N-terminal tail of Ndc80 in kinetochore-microtubule interaction in Saccharomyces
More informationSupplementary Figure 1 Analysis of beige fat and cells and characteristics of exosome release, related to Figure 1
Supplementary Figure 1 Analysis of beige fat and cells and characteristics of exosome release, related to Figure 1 (a) Fold-change in UCP-1 mrna abundance in white adipocytes upon β-adrenergic stimulation
More informationCentral laboratory Instruments
Central laboratory Instruments (A) Chemistry and Physics Unit 1- Atomic Force Microscope (AFM) Application: Study the surface morphology of Polymer 2- Gel Permeation Chromatography (GPC) Application: Molecular
More informationtargets. clustering show that different complex pathway
Supplementary Figure 1. CLICR allows clustering and activation of cytoplasmic protein targets. (a, b) Upon light activation, the Cry2 (red) and LRP6c (green) components co-cluster due to the heterodimeric
More informationUnilever s approach to assuring the safety of novel nanomaterials - supporting the risk assessment science
Unilever s approach to assuring the safety of novel nanomaterials - supporting the risk assessment science Bobbie Bradford Safety & Environmental Assurance Centre Unilever s brands Unilever s Mission is
More informationMOLECULAR MECHANISMS AND PHYSIOLOGY OF DISEASE IMPLICATIONS FOR EPIGENETICS AND HEALTH
MOLECULAR MECHANISMS AND PHYSIOLOGY OF DISEASE IMPLICATIONS FOR EPIGENETICS AND HEALTH page 1 / 5 page 2 / 5 molecular mechanisms and physiology pdf Plant physiology is a subdiscipline of botany concerned
More informationSupporting Information
Electronic Supplementary Material (ESI) for Journal of Materials Chemistry B. This journal is The Royal Society of Chemistry 2018 A Series of Two-photon Absorption Pyridinium Sulfonate Inner Salts Targeting
More informationNature Biotechnology: doi: /nbt Supplementary Figure 1. Generation of paraxial mesoderm from the H7 hesc line.
Supplementary Figure 1 Generation of paraxial mesoderm from the H7 hesc line. H7 hescs were differentiated as shown in Figure 1a. (a) Flow cytometric analyses of the proportion of CD56+, PDGFRα+, and KDR+
More informationSimulating Microbubble Flows Using COMSOL Mutiphysics
Presented at the COMSOL Conference 2008 Boston Simulating Microbubble Flows Using COMSOL Mutiphysics Xiaodong(Sheldon) Chen 1, Samir N. Ghadiali *2 1 Department of Mechanical Engineering, The Ohio State
More informationDetection of Protein Aggregation by Enzyme Immunoassay
Detection of Protein Aggregation by Enzyme Immunoassay Protein Aggregation Detection (PAD) Technology Microsens Biotechnologies www.microsens.co.uk Protein Aggregation Detection (PAD) Technology 1. The
More informationSupplemental material
Supplemental material THE JOURNAL OF CELL BIOLOGY Mourier et al., http://www.jcb.org/cgi/content/full/jcb.201411100/dc1 Figure S1. Size and mitochondrial content in Mfn1 and Mfn2 knockout hearts. (A) Body
More informationUNIT 5. Protein Synthesis 11/22/16
UNIT 5 Protein Synthesis IV. Transcription (8.4) A. RNA carries DNA s instruction 1. Francis Crick defined the central dogma of molecular biology a. Replication copies DNA b. Transcription converts DNA
More informationDynamic covalent assembly of stimuli responsive vesicle gels
Supporting Information for Dynamic covalent assembly of stimuli responsive vesicle gels Christophe B. Minkenberg, Wouter E. Hendriksen, Feng Li, Eduardo Mendes, Rienk Eelkema, and Jan H. van Esch* Department
More informationOnline Supplementary Material. Messenger RNA Interactions in the Decoding Center Control the Rate of Translocation
Online Supplementary Material Messenger RNA Interactions in the Decoding Center Control the Rate of Translocation Prashant K. Khade and Simpson Joseph Supplementary Figure 1 Dissociation of the f[ 35 S]Met-Phe-tRNA
More informationTiffany Samaroo MB&B 452a December 8, Take Home Final. Topic 1
Tiffany Samaroo MB&B 452a December 8, 2003 Take Home Final Topic 1 Prior to 1970, protein and DNA sequence alignment was limited to visual comparison. This was a very tedious process; even proteins with
More informationNa Li, PhD. Application of a Fluorescent Substrate / Inside-Out Transporter Vesicle Assay for Identifying Inhibitors of MRP Transport
Application of a Fluorescent Substrate / Inside-Out Transporter Vesicle Assay for Identifying Inhibitors of MRP Transport Na Li, PhD BD Biosciences October 20, 2010 BD Gentest Transporter Seminar Series
More informationFINAL REPORT For Japan-Korea Joint Research Project AREA
(Form4-2) FINAL REPORT For Japan-Korea Joint Research Project AREA 1. Mathematics & Physics 2. Chemistry & Material Science 3. Biology 4. Informatics & Mechatronics 5. Geo-Science & Space Science 6. Medical
More informationEffect of Mid-Ocean Exchange of Ballast Water on Bacterial Community in Ballast Tanks
Effect of Mid-Ocean Exchange of Ballast Water on Bacterial Community in Ballast Tanks 58,098 GT Length(O.A.) 239.80m Length(PP) 230.00m Breadth 43.00m Depth 20.50m Akiko Tomaru 1, Yasuwo Fukuyo 1, Masanobu
More informationActions of auxin. Hormones: communicating with chemicals History: Discovery of a growth substance (hormone- auxin)
Hormones: communicating with chemicals History- discovery of plant hormone. Auxin Concepts of hormones Auxin levels are regulated by synthesis/degradation, transport, compartmentation, conjugation. Polar
More informationSupplementary information Addendum to Quantifying the impact of transporters on cellular drug permeability
Supplementary information Addendum to Quantifying the impact of transporters on cellular drug permeability Pär Matsson, Luca A. Fenu, Patrik Lundquist, Jacek R. Wiśniewski, Manfred Kansy and Per Artursson
More informationCONJOINT 541. Translating a Transcriptome at Specific Times and Places. David Morris. Department of Biochemistry
CONJOINT 541 Translating a Transcriptome at Specific Times and Places David Morris Department of Biochemistry http://faculty.washington.edu/dmorris/ Lecture 1 The Biology and Experimental Analysis of mrna
More informationChapter 9 DNA recognition by eukaryotic transcription factors
Chapter 9 DNA recognition by eukaryotic transcription factors TRANSCRIPTION 101 Eukaryotic RNA polymerases RNA polymerase RNA polymerase I RNA polymerase II RNA polymerase III RNA polymerase IV Function
More informationFitness constraints on horizontal gene transfer
Fitness constraints on horizontal gene transfer Dan I Andersson University of Uppsala, Department of Medical Biochemistry and Microbiology, Uppsala, Sweden GMM 3, 30 Aug--2 Sep, Oslo, Norway Acknowledgements:
More informationGFP WxTP-GFP WxTP-GFP. stromules. DsRed WxTP-DsRed WxTP-DsRed. stromules
Supplemental Data. Kitajima et al. (2009). The rice -amylase glycoprotein is targeted from the Golgi apparatus through the secretory pathway to the plastids. A GFP WxTP-GFP WxTP-GFP stromules stromules
More informationIn Situ Gelation-Induced Death of Cancer Cells Based on Proteinosomes
Supporting information for In Situ Gelation-Induced Death of Cancer Cells Based on Proteinosomes Yuting Zhou, Jianmin Song, Lei Wang*, Xuting Xue, Xiaoman Liu, Hui Xie*, and Xin Huang* MIIT Key Laboratory
More informationRenal handling of substances. Dr.Charushila Rukadikar Assistance Professor Physiology
Renal handling of substances Dr.Charushila Rukadikar Assistance Professor Physiology GENERAL PRINCIPLES OF RENAL TUBULAR TRANSPORT Transport mechanisms across cell membrane 1) Passive transport i. Diffusion
More informationSupplementary Figure 1. Fullerence has poor solubility in water while the C60S and LC60S nanoparticles can be stably dispersed in water.
Supplementary Figure 1. Fullerence has poor solubility in water while the C60S and LC60S nanoparticles can be stably dispersed in water. (a) A typical photograph of fullerence (C60), C60S nanoparticles,
More informationThe Role of GRASP65 in Golgi Cisternal Stacking and Cell Cycle Progression
Traffic 2010; 11: 827 842 2010 John Wiley & Sons A/S doi:10.1111/j.1600-0854.2010.01055.x The Role of GRASP65 in Golgi Cisternal Stacking and Cell Cycle Progression Danming Tang, Hebao Yuan and Yanzhuang
More informationrobustness: revisting the significance of mirna-mediated regulation
: revisting the significance of mirna-mediated regulation Hervé Seitz IGH (CNRS), Montpellier, France October 13, 2012 microrna target identification .. microrna target identification mir: target: 2 7
More information