Dendritic computation

Size: px
Start display at page:

Download "Dendritic computation"

Transcription

1 Dendritic computation Dendrites as computational elements: Passive contributions to computation Active contributions to computation Examples

2 Geometry matters: the isopotential cell Injecting current I 0 r V m = I m R m Current flows uniformly out through the cell: I m = I 0 /4pr 2 Input resistance is defined as R N = V m (t )/I 0 = R m /4pr 2

3 Linear cable theory r m and r i are the membrane and axial resistances, i.e. the resistances of a thin slice of the cylinder

4 Axial and membrane resistance c m r m r i For a length L of membrane cable: r i r i L r m r m / L c m c m L

5 The cable equation (1) (2) (1) or where Time constant Space constant

6 Full solution for current step in infinite cable

7 Decay of voltage in space for current injection at x = 0, T 0

8 Properties of passive cables Electrotonic length

9 Electrotonic length Johnson and Wu

10 Properties of passive cables Electrotonic length Current can escape through additional pathways: speeds up decay

11 Johnson and Wu

12 Pulse response Koch

13 Pulse response Dendrites as filters

14 Koch

15 Properties of passive cables Electrotonic length Current can escape through additional pathways: speeds up decay Cable diameter affects input resistance

16 Properties of passive cables Electrotonic length Current can escape through additional pathways: speeds up decay Cable diameter affects input resistance Cable diameter affects transmission velocity

17

18

19 Passive computations London and Hausser, 2005

20 Passive computations Linear filtering: Inputs from dendrites are broadened and delayed Alters summation properties.. coincidence detection to temporal integration Delay lines Segregation of inputs Nonlinear interactions within a dendrite -- sublinear summation -- shunting inhibition Dendritic inputs labelled

21 Delay lines: the sound localization circuit Spain; Scholarpedia

22 Passive computations London and Hausser, 2005

23 Active dendrites Mechanisms to deal with the distance dependence of PSP size Subthreshold boosting: inward currents with reversal near rest Eg persistent Na + Synaptic scaling Dendritic spikes Na +, Ca 2+ and NMDA Dendritic branches as mini computational units backpropagation: feedback circuit Hebbian learning through supralinear interaction of backprop spikes with inputs

24 Segregation and amplification

25 Segregation and amplification

26 The single neuron as a neural network Segregation and amplification

27 Synaptic scaling Currents Potential Distal: integration Proximal: coincidence Magee, 2000

28 Expected distance dependence Synaptic potentials Somatic action potentials Magee, 2000

29 CA1 pyramidal neurons

30 Passive properties

31 Passive properties

32 Active properties: voltage-gated channels For short intervals (0-5ms), summation is linear or slightly supralinear For longer intervals (5-100ms), summation is sublinear Na +, Ca 2+ or NDMA receptor block eliminates supralinearity I h and K + block eliminates supralinearity Major player in synaptic scaling: hyperpolarization activated K current, I h Increases in density down the dendrite Effectively outward current due to deactivation during EPSP hyperpolarizes, shortens EPSP duration, reduces local summation

33 Active properties: voltage-gated channels Major player in synaptic scaling: hyperpolarization activated K current, I h Increases in density down the dendrite Effectively outward current due to deactivation during EPSP hyperpolarizes, shortens EPSP duration, reduces local summation

34 Synaptic properties While active properties contribute to summation, don t explain normalized amplitude Shape of EPSC determines how it is filtered.. Adjust ratio of AMPA/NMDA receptors Eliminate role of I h

35 Direction selectivity Rall; fig London and Hausser

36 References: Johnson and Wu, Foundations of Cellular Physiology, Chap 4 Koch, Biophysics of Computation Magee, Dendritic integration of excitatory synaptic input, Nature Reviews Neuroscience, 2000 London and Hausser, Dendritic Computation, Annual Reviews in Neuroscience, 2005

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring Computing in carbon Basic elements of neuroelectronics -- membranes -- ion channels -- wiring Elementary neuron models -- conductance based -- modelers alternatives Wires -- signal propagation -- processing

More information

Quantitative Electrophysiology

Quantitative Electrophysiology ECE 795: Quantitative Electrophysiology Notes for Lecture #4 Wednesday, October 4, 2006 7. CHEMICAL SYNAPSES AND GAP JUNCTIONS We will look at: Chemical synapses in the nervous system Gap junctions in

More information

Propagation& Integration: Passive electrical properties

Propagation& Integration: Passive electrical properties Fundamentals of Neuroscience (NSCS 730, Spring 2010) Instructor: Art Riegel; email: Riegel@musc.edu; Room EL 113; time: 9 11 am Office: 416C BSB (792.5444) Propagation& Integration: Passive electrical

More information

Integration of synaptic inputs in dendritic trees

Integration of synaptic inputs in dendritic trees Integration of synaptic inputs in dendritic trees Theoretical Neuroscience Fabrizio Gabbiani Division of Neuroscience Baylor College of Medicine One Baylor Plaza Houston, TX 77030 e-mail:gabbiani@bcm.tmc.edu

More information

Biological Modeling of Neural Networks

Biological Modeling of Neural Networks Week 4 part 2: More Detail compartmental models Biological Modeling of Neural Networks Week 4 Reducing detail - Adding detail 4.2. Adding detail - apse -cable equat Wulfram Gerstner EPFL, Lausanne, Switzerland

More information

80% of all excitatory synapses - at the dendritic spines.

80% of all excitatory synapses - at the dendritic spines. Dendritic Modelling Dendrites (from Greek dendron, tree ) are the branched projections of a neuron that act to conduct the electrical stimulation received from other cells to and from the cell body, or

More information

Structure and Measurement of the brain lecture notes

Structure and Measurement of the brain lecture notes Structure and Measurement of the brain lecture notes Marty Sereno 2009/2010!"#$%&'(&#)*%$#&+,'-&.)"/*"&.*)*-'(0&1223 Neurons and Models Lecture 1 Topics Membrane (Nernst) Potential Action potential/voltage-gated

More information

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring. Elementary neuron models -- conductance based -- modelers alternatives

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring. Elementary neuron models -- conductance based -- modelers alternatives Computing in carbon Basic elements of neuroelectronics -- membranes -- ion channels -- wiring Elementary neuron models -- conductance based -- modelers alternatives Wiring neurons together -- synapses

More information

Introduction to Neural Networks U. Minn. Psy 5038 Spring, 1999 Daniel Kersten. Lecture 2a. The Neuron - overview of structure. From Anderson (1995)

Introduction to Neural Networks U. Minn. Psy 5038 Spring, 1999 Daniel Kersten. Lecture 2a. The Neuron - overview of structure. From Anderson (1995) Introduction to Neural Networks U. Minn. Psy 5038 Spring, 1999 Daniel Kersten Lecture 2a The Neuron - overview of structure From Anderson (1995) 2 Lect_2a_Mathematica.nb Basic Structure Information flow:

More information

/639 Final Solutions, Part a) Equating the electrochemical potentials of H + and X on outside and inside: = RT ln H in

/639 Final Solutions, Part a) Equating the electrochemical potentials of H + and X on outside and inside: = RT ln H in 580.439/639 Final Solutions, 2014 Question 1 Part a) Equating the electrochemical potentials of H + and X on outside and inside: RT ln H out + zf 0 + RT ln X out = RT ln H in F 60 + RT ln X in 60 mv =

More information

CSE/NB 528 Final Lecture: All Good Things Must. CSE/NB 528: Final Lecture

CSE/NB 528 Final Lecture: All Good Things Must. CSE/NB 528: Final Lecture CSE/NB 528 Final Lecture: All Good Things Must 1 Course Summary Where have we been? Course Highlights Where do we go from here? Challenges and Open Problems Further Reading 2 What is the neural code? What

More information

Synaptic dynamics. John D. Murray. Synaptic currents. Simple model of the synaptic gating variable. First-order kinetics

Synaptic dynamics. John D. Murray. Synaptic currents. Simple model of the synaptic gating variable. First-order kinetics Synaptic dynamics John D. Murray A dynamical model for synaptic gating variables is presented. We use this to study the saturation of synaptic gating at high firing rate. Shunting inhibition and the voltage

More information

COGNITIVE SCIENCE 107A

COGNITIVE SCIENCE 107A COGNITIVE SCIENCE 107A Electrophysiology: Electrotonic Properties 2 Jaime A. Pineda, Ph.D. The Model Neuron Lab Your PC/CSB115 http://cogsci.ucsd.edu/~pineda/cogs107a/index.html Labs - Electrophysiology

More information

11/19/14. Dendri,c processing in real neurons

11/19/14. Dendri,c processing in real neurons Dendri,c processing in real neurons N Spruston (2008) Pyramidal neurons: dendri,c structure and synap,c integra,on. Nature Rev. Neurosci. 9:206-221. Dendri,c tree representa,on for a spinal cord alpha

More information

Decoding. How well can we learn what the stimulus is by looking at the neural responses?

Decoding. How well can we learn what the stimulus is by looking at the neural responses? Decoding How well can we learn what the stimulus is by looking at the neural responses? Two approaches: devise explicit algorithms for extracting a stimulus estimate directly quantify the relationship

More information

Introduction and the Hodgkin-Huxley Model

Introduction and the Hodgkin-Huxley Model 1 Introduction and the Hodgkin-Huxley Model Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 Reference:

More information

MEMBRANE POTENTIALS AND ACTION POTENTIALS:

MEMBRANE POTENTIALS AND ACTION POTENTIALS: University of Jordan Faculty of Medicine Department of Physiology & Biochemistry Medical students, 2017/2018 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Review: Membrane physiology

More information

Time-Skew Hebb Rule in a Nonisopotential Neuron

Time-Skew Hebb Rule in a Nonisopotential Neuron Time-Skew Hebb Rule in a Nonisopotential Neuron Barak A. Pearlmutter To appear (1995) in Neural Computation, 7(4) 76 712 Abstract In an isopotential neuron with rapid response, it has been shown that the

More information

An Efficient Method for Computing Synaptic Conductances Based on a Kinetic Model of Receptor Binding

An Efficient Method for Computing Synaptic Conductances Based on a Kinetic Model of Receptor Binding NOTE Communicated by Michael Hines An Efficient Method for Computing Synaptic Conductances Based on a Kinetic Model of Receptor Binding A. Destexhe Z. F. Mainen T. J. Sejnowski The Howard Hughes Medical

More information

Model Neurons II: Conductances and Morphology

Model Neurons II: Conductances and Morphology Chapter 6 Model Neurons II: Conductances and Morphology 6.1 Levels of Neuron Modeling In modeling neurons, we must deal with two types of complexity; the intricate interplay of active conductances that

More information

Deconstructing Actual Neurons

Deconstructing Actual Neurons 1 Deconstructing Actual Neurons Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 Reference: The many ionic

More information

Supratim Ray

Supratim Ray Supratim Ray sray@cns.iisc.ernet.in Biophysics of Action Potentials Passive Properties neuron as an electrical circuit Passive Signaling cable theory Active properties generation of action potential Techniques

More information

Organization of the nervous system. Tortora & Grabowski Principles of Anatomy & Physiology; Page 388, Figure 12.2

Organization of the nervous system. Tortora & Grabowski Principles of Anatomy & Physiology; Page 388, Figure 12.2 Nervous system Organization of the nervous system Tortora & Grabowski Principles of Anatomy & Physiology; Page 388, Figure 12.2 Autonomic and somatic efferent pathways Reflex arc - a neural pathway that

More information

9 Generation of Action Potential Hodgkin-Huxley Model

9 Generation of Action Potential Hodgkin-Huxley Model 9 Generation of Action Potential Hodgkin-Huxley Model (based on chapter 2, W.W. Lytton, Hodgkin-Huxley Model) 9. Passive and active membrane models In the previous lecture we have considered a passive

More information

Action Potential (AP) NEUROEXCITABILITY II-III. Na + and K + Voltage-Gated Channels. Voltage-Gated Channels. Voltage-Gated Channels

Action Potential (AP) NEUROEXCITABILITY II-III. Na + and K + Voltage-Gated Channels. Voltage-Gated Channels. Voltage-Gated Channels NEUROEXCITABILITY IIIII Action Potential (AP) enables longdistance signaling woohoo! shows threshold activation allornone in amplitude conducted without decrement caused by increase in conductance PNS

More information

Exercise 15 : Cable Equation

Exercise 15 : Cable Equation Biophysics of Neural Computation : Introduction to Neuroinformatics WS 2008-2009 Prof. Rodney Douglas, Kevan Martin, Hans Scherberger, Matthew Cook Ass. Frederic Zubler fred@ini.phys.ethz.ch http://www.ini.uzh.ch/

More information

9 Generation of Action Potential Hodgkin-Huxley Model

9 Generation of Action Potential Hodgkin-Huxley Model 9 Generation of Action Potential Hodgkin-Huxley Model (based on chapter 12, W.W. Lytton, Hodgkin-Huxley Model) 9.1 Passive and active membrane models In the previous lecture we have considered a passive

More information

Compartmental Modelling

Compartmental Modelling Modelling Neurons Computing and the Brain Compartmental Modelling Spring 2010 2 1 Equivalent Electrical Circuit A patch of membrane is equivalent to an electrical circuit This circuit can be described

More information

Consider the following spike trains from two different neurons N1 and N2:

Consider the following spike trains from two different neurons N1 and N2: About synchrony and oscillations So far, our discussions have assumed that we are either observing a single neuron at a, or that neurons fire independent of each other. This assumption may be correct in

More information

Lecture 11 : Simple Neuron Models. Dr Eileen Nugent

Lecture 11 : Simple Neuron Models. Dr Eileen Nugent Lecture 11 : Simple Neuron Models Dr Eileen Nugent Reading List Nelson, Biological Physics, Chapter 12 Phillips, PBoC, Chapter 17 Gerstner, Neuronal Dynamics: from single neurons to networks and models

More information

Introduction to Neural Networks. Daniel Kersten. Lecture 2. Getting started with Mathematica. Review this section in Lecture 1

Introduction to Neural Networks. Daniel Kersten. Lecture 2. Getting started with Mathematica. Review this section in Lecture 1 Introduction to Neural Networks Daniel Kersten Lecture 2 Getting started with Mathematica Review this section in Lecture 1 2 Lect_2_TheNeuron.nb The Neuron - overview of structure From Anderson (1995)

More information

Neural Conduction. biologyaspoetry.com

Neural Conduction. biologyaspoetry.com Neural Conduction biologyaspoetry.com Resting Membrane Potential -70mV A cell s membrane potential is the difference in the electrical potential ( charge) between the inside and outside of the cell. The

More information

Channels can be activated by ligand-binding (chemical), voltage change, or mechanical changes such as stretch.

Channels can be activated by ligand-binding (chemical), voltage change, or mechanical changes such as stretch. 1. Describe the basic structure of an ion channel. Name 3 ways a channel can be "activated," and describe what occurs upon activation. What are some ways a channel can decide what is allowed to pass through?

More information

A FINITE STATE AUTOMATON MODEL FOR MULTI-NEURON SIMULATIONS

A FINITE STATE AUTOMATON MODEL FOR MULTI-NEURON SIMULATIONS A FINITE STATE AUTOMATON MODEL FOR MULTI-NEURON SIMULATIONS Maria Schilstra, Alistair Rust, Rod Adams and Hamid Bolouri Science and Technology Research Centre, University of Hertfordshire, UK Department

More information

Νευροφυσιολογία και Αισθήσεις

Νευροφυσιολογία και Αισθήσεις Biomedical Imaging & Applied Optics University of Cyprus Νευροφυσιολογία και Αισθήσεις Διάλεξη 5 Μοντέλο Hodgkin-Huxley (Hodgkin-Huxley Model) Response to Current Injection 2 Hodgin & Huxley Sir Alan Lloyd

More information

Action Potentials and Synaptic Transmission Physics 171/271

Action Potentials and Synaptic Transmission Physics 171/271 Action Potentials and Synaptic Transmission Physics 171/271 Flavio Fröhlich (flavio@salk.edu) September 27, 2006 In this section, we consider two important aspects concerning the communication between

More information

Control and Integration. Nervous System Organization: Bilateral Symmetric Animals. Nervous System Organization: Radial Symmetric Animals

Control and Integration. Nervous System Organization: Bilateral Symmetric Animals. Nervous System Organization: Radial Symmetric Animals Control and Integration Neurophysiology Chapters 10-12 Nervous system composed of nervous tissue cells designed to conduct electrical impulses rapid communication to specific cells or groups of cells Endocrine

More information

Nervous Systems: Neuron Structure and Function

Nervous Systems: Neuron Structure and Function Nervous Systems: Neuron Structure and Function Integration An animal needs to function like a coherent organism, not like a loose collection of cells. Integration = refers to processes such as summation

More information

Passive Membrane Properties

Passive Membrane Properties Passive Membrane Properties Communicating through a leaky garden hose... Topics I Introduction & Electrochemical Gradients Passive Membrane Properties Action Potentials Voltage-Gated Ion Channels Topics

More information

Dendritic cable with active spines: a modelling study in the spike-diffuse-spike framework

Dendritic cable with active spines: a modelling study in the spike-diffuse-spike framework Dendritic cable with active spines: a modelling study in the spike-diffuse-spike framework Yulia Timofeeva a, Gabriel Lord a and Stephen Coombes b a Department of Mathematics, Heriot-Watt University, Edinburgh,

More information

How and why neurons fire

How and why neurons fire How and why neurons fire 1 Neurophysiological Background The Neuron Contents: Structure Electrical Mebrane Properties Ion Channels Actionpotential Signal Propagation Synaptic Transission 2 Structure of

More information

Nervous System Organization

Nervous System Organization The Nervous System Chapter 44 Nervous System Organization All animals must be able to respond to environmental stimuli -Sensory receptors = Detect stimulus -Motor effectors = Respond to it -The nervous

More information

Lecture 10 : Neuronal Dynamics. Eileen Nugent

Lecture 10 : Neuronal Dynamics. Eileen Nugent Lecture 10 : Neuronal Dynamics Eileen Nugent Origin of the Cells Resting Membrane Potential: Nernst Equation, Donnan Equilbrium Action Potentials in the Nervous System Equivalent Electrical Circuits and

More information

Information processing. Divisions of nervous system. Neuron structure and function Synapse. Neurons, synapses, and signaling 11/3/2017

Information processing. Divisions of nervous system. Neuron structure and function Synapse. Neurons, synapses, and signaling 11/3/2017 Neurons, synapses, and signaling Chapter 48 Information processing Divisions of nervous system Central nervous system (CNS) Brain and a nerve cord Integration center Peripheral nervous system (PNS) Nerves

More information

The Journal of Physiology Neuroscience

The Journal of Physiology Neuroscience J Physiol 594.3 (206) pp 3809 3825 3809 The Journal of Physiology Neuroscience Active subthreshold dendritic conductances shape the local field potential Torbjørn V. Ness, Michiel W. H. Remme 2 and Gaute

More information

Chapter 9. Nerve Signals and Homeostasis

Chapter 9. Nerve Signals and Homeostasis Chapter 9 Nerve Signals and Homeostasis A neuron is a specialized nerve cell that is the functional unit of the nervous system. Neural signaling communication by neurons is the process by which an animal

More information

Neuroscience 201A Exam Key, October 7, 2014

Neuroscience 201A Exam Key, October 7, 2014 Neuroscience 201A Exam Key, October 7, 2014 Question #1 7.5 pts Consider a spherical neuron with a diameter of 20 µm and a resting potential of -70 mv. If the net negativity on the inside of the cell (all

More information

لجنة الطب البشري رؤية تنير دروب تميزكم

لجنة الطب البشري رؤية تنير دروب تميزكم 1) Hyperpolarization phase of the action potential: a. is due to the opening of voltage-gated Cl channels. b. is due to prolonged opening of voltage-gated K + channels. c. is due to closure of the Na +

More information

arxiv: v1 [q-bio.nc] 13 Feb 2018

arxiv: v1 [q-bio.nc] 13 Feb 2018 Gain control with A-type potassium current: I A as a switch between divisive and subtractive inhibition Joshua H Goldwyn 1*, Bradley R Slabe 2, Joseph B Travers 3, David Terman 2 arxiv:182.4794v1 [q-bio.nc]

More information

Neurophysiology. Danil Hammoudi.MD

Neurophysiology. Danil Hammoudi.MD Neurophysiology Danil Hammoudi.MD ACTION POTENTIAL An action potential is a wave of electrical discharge that travels along the membrane of a cell. Action potentials are an essential feature of animal

More information

UNIT I INTRODUCTION TO ARTIFICIAL NEURAL NETWORK IT 0469 NEURAL NETWORKS

UNIT I INTRODUCTION TO ARTIFICIAL NEURAL NETWORK IT 0469 NEURAL NETWORKS UNIT I INTRODUCTION TO ARTIFICIAL NEURAL NETWORK IT 0469 NEURAL NETWORKS Elementary Neuro Physiology Neuron: A neuron nerve cell is an electricallyexcitable cell that processes and transmits information

More information

Biosciences in the 21st century

Biosciences in the 21st century Biosciences in the 21st century Lecture 1: Neurons, Synapses, and Signaling Dr. Michael Burger Outline: 1. Why neuroscience? 2. The neuron 3. Action potentials 4. Synapses 5. Organization of the nervous

More information

Spiking and saturating dendrites differentially expand single neuron computation capacity.

Spiking and saturating dendrites differentially expand single neuron computation capacity. Spiking and saturating dendrites differentially expand single neuron computation capacity. Romain Cazé INSERM U960, Paris Diderot, Paris 7, ENS 29 rue d Ulm, 75005 Paris romain.caze@ens.fr Mark Humphries

More information

Neural Modeling and Computational Neuroscience. Claudio Gallicchio

Neural Modeling and Computational Neuroscience. Claudio Gallicchio Neural Modeling and Computational Neuroscience Claudio Gallicchio 1 Neuroscience modeling 2 Introduction to basic aspects of brain computation Introduction to neurophysiology Neural modeling: Elements

More information

Relation between neuronal morphology and electrophysiology in the Kainate lesion model of Alzheimer s Disease

Relation between neuronal morphology and electrophysiology in the Kainate lesion model of Alzheimer s Disease Relation between neuronal morphology and electrophysiology in the Kainate lesion model of Alzheimer s Disease Slawomir J. Nasuto Department of Cybernetics, University of Reading Collaborators Giorgio A.

More information

Overview Organization: Central Nervous System (CNS) Peripheral Nervous System (PNS) innervate Divisions: a. Afferent

Overview Organization: Central Nervous System (CNS) Peripheral Nervous System (PNS) innervate Divisions: a. Afferent Overview Organization: Central Nervous System (CNS) Brain and spinal cord receives and processes information. Peripheral Nervous System (PNS) Nerve cells that link CNS with organs throughout the body.

More information

Lecture 2. Excitability and ionic transport

Lecture 2. Excitability and ionic transport Lecture 2 Excitability and ionic transport Selective membrane permeability: The lipid barrier of the cell membrane and cell membrane transport proteins Chemical compositions of extracellular and intracellular

More information

Neuron. Detector Model. Understanding Neural Components in Detector Model. Detector vs. Computer. Detector. Neuron. output. axon

Neuron. Detector Model. Understanding Neural Components in Detector Model. Detector vs. Computer. Detector. Neuron. output. axon Neuron Detector Model 1 The detector model. 2 Biological properties of the neuron. 3 The computational unit. Each neuron is detecting some set of conditions (e.g., smoke detector). Representation is what

More information

Physiology Unit 2. MEMBRANE POTENTIALS and SYNAPSES

Physiology Unit 2. MEMBRANE POTENTIALS and SYNAPSES Physiology Unit 2 MEMBRANE POTENTIALS and SYNAPSES Neuron Communication Neurons are stimulated by receptors on dendrites and cell bodies (soma) Ligand gated ion channels GPCR s Neurons stimulate cells

More information

/639 Final Exam Solutions, 2007

/639 Final Exam Solutions, 2007 580.439/639 Final Exam Solutions, 2007 Problem Part a) Larger conductance in the postsynaptic receptor array; action potentials (usually Ca ++ ) propagating in the orward direction in the dendrites; ampliication

More information

MATH 3104: THE HODGKIN-HUXLEY EQUATIONS

MATH 3104: THE HODGKIN-HUXLEY EQUATIONS MATH 3104: THE HODGKIN-HUXLEY EQUATIONS Parallel conductance model A/Prof Geoffrey Goodhill, Semester 1, 2009 So far we have modelled neuronal membranes by just one resistance (conductance) variable. We

More information

Chapter 48 Neurons, Synapses, and Signaling

Chapter 48 Neurons, Synapses, and Signaling Chapter 48 Neurons, Synapses, and Signaling Concept 48.1 Neuron organization and structure reflect function in information transfer Neurons are nerve cells that transfer information within the body Neurons

More information

Model Neurons I: Neuroelectronics

Model Neurons I: Neuroelectronics Chapter 5 Model Neurons I: Neuroelectronics 5.1 Introduction A great deal is known about the biophysical mechanisms responsible for generating neuronal activity, and these provide a basis for constructing

More information

Equivalent Circuit Model of the Neuron

Equivalent Circuit Model of the Neuron Generator Potentials, Synaptic Potentials and Action Potentials All Can Be Described by the Equivalent Circuit Model of the Membrane Equivalent Circuit Model of the Neuron PNS, Fig 211 The Nerve (or Muscle)

More information

DISTINGUISHING THEORETICAL SYNAPTIC POTEN- TIALS COMPUTED FOR DIFFERENT SOMA-DEN- DRITIC DISTRIBUTIONS OF SYNAPTIC INPUT

DISTINGUISHING THEORETICAL SYNAPTIC POTEN- TIALS COMPUTED FOR DIFFERENT SOMA-DEN- DRITIC DISTRIBUTIONS OF SYNAPTIC INPUT DISTINGUISHING THEORETICAL SYNAPTIC POTEN- TIALS COMPUTED FOR DIFFERENT SOMA-DEN- DRITIC DISTRIBUTIONS OF SYNAPTIC INPUT WILFRID Mathematical Research Branch, NationaL Institute of Arthritis and Metabolic

More information

3 Detector vs. Computer

3 Detector vs. Computer 1 Neurons 1. The detector model. Also keep in mind this material gets elaborated w/the simulations, and the earliest material is often hardest for those w/primarily psych background. 2. Biological properties

More information

Final Exam Solutions, 1999

Final Exam Solutions, 1999 580.439 Final Exam Solutions, 999 Problem Part a A minimal circuit model is drawn below. The synaptic inals of cells A and B are represented by the parallel Cell A combination of synaptic conductance (G

More information

Mathematical Foundations of Neuroscience - Lecture 3. Electrophysiology of neurons - continued

Mathematical Foundations of Neuroscience - Lecture 3. Electrophysiology of neurons - continued Mathematical Foundations of Neuroscience - Lecture 3. Electrophysiology of neurons - continued Filip Piękniewski Faculty of Mathematics and Computer Science, Nicolaus Copernicus University, Toruń, Poland

More information

Conductance-Based Integrate-and-Fire Models

Conductance-Based Integrate-and-Fire Models NOTE Communicated by Michael Hines Conductance-Based Integrate-and-Fire Models Alain Destexhe Department of Physiology, Laval University School of Medicine, Québec, G1K 7P4, Canada A conductance-based

More information

Resting Membrane Potential

Resting Membrane Potential Resting Membrane Potential Fig. 12.09a,b Recording of Resting and It is recorded by cathode ray oscilloscope action potentials -70 0 mv + it is negative in polarized (resting, the membrane can be excited)

More information

Nervous Tissue. Neurons Electrochemical Gradient Propagation & Transduction Neurotransmitters Temporal & Spatial Summation

Nervous Tissue. Neurons Electrochemical Gradient Propagation & Transduction Neurotransmitters Temporal & Spatial Summation Nervous Tissue Neurons Electrochemical Gradient Propagation & Transduction Neurotransmitters Temporal & Spatial Summation What is the function of nervous tissue? Maintain homeostasis & respond to stimuli

More information

Physiology Unit 2. MEMBRANE POTENTIALS and SYNAPSES

Physiology Unit 2. MEMBRANE POTENTIALS and SYNAPSES Physiology Unit 2 MEMBRANE POTENTIALS and SYNAPSES In Physiology Today Ohm s Law I = V/R Ohm s law: the current through a conductor between two points is directly proportional to the voltage across the

More information

This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore.

This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore. This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore. Title Small-signal neural models and their applications Author(s) Basu, Arindam Citation Basu, A. (01). Small-signal

More information

Dendrites - receives information from other neuron cells - input receivers.

Dendrites - receives information from other neuron cells - input receivers. The Nerve Tissue Neuron - the nerve cell Dendrites - receives information from other neuron cells - input receivers. Cell body - includes usual parts of the organelles of a cell (nucleus, mitochondria)

More information

An Introductory Course in Computational Neuroscience

An Introductory Course in Computational Neuroscience An Introductory Course in Computational Neuroscience Contents Series Foreword Acknowledgments Preface 1 Preliminary Material 1.1. Introduction 1.1.1 The Cell, the Circuit, and the Brain 1.1.2 Physics of

More information

Neuron, volume 60 Supplemental Data

Neuron, volume 60 Supplemental Data Neuron, volume 60 Supplemental Data Tuning of Synaptic Integration in the Medial Entorhinal Cortex to the Organization of Grid Cell Firing Fields Derek L.F. Garden, Paul D. Dodson, Cian O Donnell, Melanie

More information

Alteration of resting membrane potential

Alteration of resting membrane potential Observation electric current easuring electrodes Alteration of resting ebrane potential ebrán extracellular spece intracellular space 1. passive electric properties of the ebrane Inward current Depolarization

More information

Membrane Potentials, Action Potentials, and Synaptic Transmission. Membrane Potential

Membrane Potentials, Action Potentials, and Synaptic Transmission. Membrane Potential Cl Cl - - + K + K+ K + K Cl - 2/2/15 Membrane Potentials, Action Potentials, and Synaptic Transmission Core Curriculum II Spring 2015 Membrane Potential Example 1: K +, Cl - equally permeant no charge

More information

Ch. 5. Membrane Potentials and Action Potentials

Ch. 5. Membrane Potentials and Action Potentials Ch. 5. Membrane Potentials and Action Potentials Basic Physics of Membrane Potentials Nerve and muscle cells: Excitable Capable of generating rapidly changing electrochemical impulses at their membranes

More information

Channel Noise in Excitable Neuronal Membranes

Channel Noise in Excitable Neuronal Membranes Channel Noise in Excitable Neuronal Membranes Amit Manwani, Peter N. Steinmetz and Christof Koch Computation and Neural Systems Program, M-S 9-74 California Institute of Technology Pasadena, CA 95 fquixote,peter,kochg@klab.caltech.edu

More information

Computational Neuroscience. Lubica Benuskova Lecture 1

Computational Neuroscience. Lubica Benuskova Lecture 1 Computational Neuroscience Lubica Benuskova Lecture 1 1 Outline Brief history of Computational Neuroscience, i.e. computational modelling of biological neurons Blue Brain project Basic concepts of computational

More information

Introduction to CNS neurobiology: focus on retina

Introduction to CNS neurobiology: focus on retina Introduction to CNS neurobiology: focus on retina September 27, 2017 The retina is part of the CNS Calloway et al., 2009) 1 Retinal circuits: neurons and synapses Rods and Cones Bipolar cells Horizontal

More information

Voltage-clamp and Hodgkin-Huxley models

Voltage-clamp and Hodgkin-Huxley models Voltage-clamp and Hodgkin-Huxley models Read: Hille, Chapters 2-5 (best) Koch, Chapters 6, 8, 9 See also Clay, J. Neurophysiol. 80:903-913 (1998) (for a recent version of the HH squid axon model) Rothman

More information

Neuronal coupling by endogenous electric fields: cable theory and applications to coincidence detector neurons in the auditory brain stem

Neuronal coupling by endogenous electric fields: cable theory and applications to coincidence detector neurons in the auditory brain stem J Neurophysiol 115: 2033 2051, 2016. First published January 28, 2016; doi:10.1152/jn.00780.2015. Neuronal coupling by endogenous electric fields: cable theory and applications to coincidence detector

More information

How do synapses transform inputs?

How do synapses transform inputs? Neurons to networks How do synapses transform inputs? Excitatory synapse Input spike! Neurotransmitter release binds to/opens Na channels Change in synaptic conductance! Na+ influx E.g. AMA synapse! Depolarization

More information

CELLULAR NEUROPHYSIOLOGY CONSTANCE HAMMOND

CELLULAR NEUROPHYSIOLOGY CONSTANCE HAMMOND CELLULAR NEUROPHYSIOLOGY CONSTANCE HAMMOND Chapter 1 Zoom in on Patch configurations In the jargon of electrophysiologists, a patch is a piece of neuronal membrane. Researchers invented a technique known

More information

Neurons, Synapses, and Signaling

Neurons, Synapses, and Signaling Chapter 48 Neurons, Synapses, and Signaling PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions

More information

Client-Server Architecture for a Neural Simulation Tool

Client-Server Architecture for a Neural Simulation Tool Client-Server Architecture for a Neural Simulation Tool Olga Kroupina and Raúl Rojas Institute of Computer Science Free University of Berlin Takustr. 9, D-14195 Berlin Germany ABSTRACT NeuroSim is a simulator

More information

Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests

Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests J. Benda, M. Bethge, M. Hennig, K. Pawelzik & A.V.M. Herz February, 7 Abstract Spike-frequency adaptation is a common feature of

More information

Bio 449 Fall Exam points total Multiple choice. As with any test, choose the best answer in each case. Each question is 3 points.

Bio 449 Fall Exam points total Multiple choice. As with any test, choose the best answer in each case. Each question is 3 points. Name: Exam 1 100 points total Multiple choice. As with any test, choose the best answer in each case. Each question is 3 points. 1. The term internal environment, as coined by Clause Bernard, is best defined

More information

Nervous System Organization

Nervous System Organization The Nervous System Nervous System Organization Receptors respond to stimuli Sensory receptors detect the stimulus Motor effectors respond to stimulus Nervous system divisions Central nervous system Command

More information

Phase Response. 1 of of 11. Synaptic input advances (excitatory) or delays (inhibitory) spiking

Phase Response. 1 of of 11. Synaptic input advances (excitatory) or delays (inhibitory) spiking Printed from the Mathematica Help Browser 1 1 of 11 Phase Response Inward current-pulses decrease a cortical neuron's period (Cat, Layer V). [Fetz93] Synaptic input advances (excitatory) or delays (inhibitory)

More information

Nerve Signal Conduction. Resting Potential Action Potential Conduction of Action Potentials

Nerve Signal Conduction. Resting Potential Action Potential Conduction of Action Potentials Nerve Signal Conduction Resting Potential Action Potential Conduction of Action Potentials Resting Potential Resting neurons are always prepared to send a nerve signal. Neuron possesses potential energy

More information

Equivalent Circuit of the Membrane Connected to the Voltage Clamp. I mon. For Large Depolarizations, Both I Na and I K Are Activated

Equivalent Circuit of the Membrane Connected to the Voltage Clamp. I mon. For Large Depolarizations, Both I Na and I K Are Activated VoltageGated Ion Channels and the Action Potential jdk3 Principles of Neural Science, chaps 8&9 VoltageGated Ion Channels and the Action Potential The Action Potential Generation Conduction VoltageGated

More information

6.3.4 Action potential

6.3.4 Action potential I ion C m C m dφ dt Figure 6.8: Electrical circuit model of the cell membrane. Normally, cells are net negative inside the cell which results in a non-zero resting membrane potential. The membrane potential

More information

What we talk about when we talk about capacitance measured with the voltage-clamp step method

What we talk about when we talk about capacitance measured with the voltage-clamp step method DOI 10.1007/s10827-011-0346-8 What we talk about when we talk about capacitance measured with the voltage-clamp step method Adam L. Taylor Received: 24 August 2010 / Revised: 8 May 2011 / Accepted: 29

More information

1. Neurons & Action Potentials

1. Neurons & Action Potentials Lecture 6, 30 Jan 2008 Vertebrate Physiology ECOL 437 (MCB/VetSci 437) Univ. of Arizona, spring 2008 Kevin Bonine & Kevin Oh 1. Intro Nervous System Fxn (slides 32-60 from Mon 28 Jan; Ch10) 2. Neurons

More information

Subthreshold cross-correlations between cortical neurons: Areference model with static synapses

Subthreshold cross-correlations between cortical neurons: Areference model with static synapses Neurocomputing 65 66 (25) 685 69 www.elsevier.com/locate/neucom Subthreshold cross-correlations between cortical neurons: Areference model with static synapses Ofer Melamed a,b, Gilad Silberberg b, Henry

More information

Peripheral Nerve II. Amelyn Ramos Rafael, MD. Anatomical considerations

Peripheral Nerve II. Amelyn Ramos Rafael, MD. Anatomical considerations Peripheral Nerve II Amelyn Ramos Rafael, MD Anatomical considerations 1 Physiologic properties of the nerve Irritability of the nerve A stimulus applied on the nerve causes the production of a nerve impulse,

More information

Synaptic Input. Linear Model of Synaptic Transmission. Professor David Heeger. September 5, 2000

Synaptic Input. Linear Model of Synaptic Transmission. Professor David Heeger. September 5, 2000 Synaptic Input Professor David Heeger September 5, 2000 The purpose of this handout is to go a bit beyond the discussion in Ch. 6 of The Book of Genesis on synaptic input, and give some examples of how

More information