Bile salt transport profiling of hepatic transporters. Peter Krajcsi
|
|
- Hugo Barrett
- 5 years ago
- Views:
Transcription
1 Bile salt transport profiling of hepatic transporters Peter Krajcsi
2 The human bile Carey and Duane: The liver, 3rd edition
3 Bile acids / salts Cholesterol Hepatocytes Primary bile acids: Chenodeoxycholic acid Cholic acids Intestinal bacteria Secondary bile acids: Lithocholic acid Deoxycholic acid Ursodeoxycholic acid Sulfation, Glucuronidation Sulfated / glucuronated bile acids Amidation: glycine or taurin Monovalent bile salts Sulfation, Glucuronidation Divalent bile salts
4 Inhibition of transport of endobiotics Transport of endobiotics Altered homeostasis Potential toxicity
5 Bile salt transportin hepatocytes BS BSEP deficiency / PFIC2 MRP4 Bile acid in serum Bile acid in bile high low BS OATP1A2 BS Hepatocyte Phospholipid in bile normal BS NTCP BS BSEP MRP2 BS- BS-C Bile / Canaliculus Phase II conjugation BS-C BS OATP1B1 BS BS-C MRP3 Blood / Sinusoidal Space Morgan 2010 Tox Sci BS-C
6 Number of cases Drug induced liver injury cholestatic mixed hepatocellular 5 0 Y. Meier et al., Eur J Clin Pharmacol 61, 135, 2005 ~30% cholestatic or mixed Swedish study: almost 50% of DILI cases were cholestatic or mixed (Björnsson & Olssson 2005 Hepatology)
7 Human BSEP VT a HT screening tool Of particular interest are the compounds with an IC50 value of <25 um...almost all compounds with this level of potency for BSEP interference are associated with liver injury in humans Morgan 2010 Tox Sci
8 Inhibition of transport of endobiotics Transport of endobiotics Indication of transporter function Potential biomarker
9 Plasma levels of sulfates in cynos Thakare 2017 DMD
10 Effect of rifampicin on plasma levels of phase II conjugates of bile acids/salts Takehara 2017 Pharm Res
11 Kinetics of transport sulfates, glucuronides Takehara 2017 Pharm Res
12 Assay systems to study bile salt - transporter interaction BS Inside-out vesicles BS BS ATP Cellular uptake influx / uptake / SLC transporters BS ADP + Pi Vesicular uptake efflux / ABC transporters
13 BSEP BSEP-HAM rbsep rbsep-ham mbsep mbsep-ham BSEP/Bsep vs BSEP/Bsep-HAM species specificity rbsep BSEP mbsep Kis 2009 DMD
14 Cholesterol loading increases activity of BSEP development of high activity membranes (HAM) Kis 2009 DMD
15 BSEP/Bsep vs BSEP/Bsep-HAM Eadie-Hofstee plots BSEP mbsep rbsep Kis 2009 DMD
16 BSEP membranes CsA inhibition Taurocholate accumulation in CPM Inhibition of taurocholate accumulation into BSEP expressing membrane vesicles by Cyclosporin A Cyclosporin A conc. in mm BSEP-Sf9 ATP BSEP-Sf9 AMP BSEP-Hi5 ATP BSEP-Hi5 AMP BSEP-HEK ATP BSEP-HEK AMP Origin Signal/noise (ATP+/ATP-) IC50 for reference inhibitor (mm) SB-BSEP-HEK293 Mammalian SB-BSEP-Sf9 Insect SB-BSEP-Hi5 Insect
17 Bile acids/salts CDC GCDC TCDC 3S-CDC TC 3S-GLC
18 Glycholithocholic acid-sulfate effect on bile flow, morphology Yousef 1981 Gastroenterology
19 Screening strategy Feasibility screen (2 concentrations, 2 timepoints) Time course Kinetics
20 OATP1B1 - feasibility
21 OATP1B1 time courses
22 OATP1B1 - kinetics
23 CL int (ml/mg/min) C L in t (m l/m g /m in ) Bile salt substrate profiling NTCP, OATP1B1 NTCP OATP1B ** ** p= p= * p = * p = p = * GCDC TC 3S-GLC 0 G C D C T C D C T C 3 S -C D C 3 S -G L C
24 HEAT map human transporters Bile Salt / Transporter NTCP OATP1B1 CDC TCDC GCDC TC 3S-CDC 3S-GLC Bile Salt / Transporter BSEP MRP2 MRP3 MRP4 CDC TCDC GCDC TC 3S-CDC 3S-GLC The boxes in red indicate POC folds >4, the boxes in orange indicate POC folds 4>fold>2.5, the boxes in yellow indicate POC folds 2.5>fold>1.5, and the boxes in blue indicate no transport.
25 Bile acids/salts CDC GCDC 3S-CDC 3S-GCDC
26 3 S -C D C u p ta k e (p m o l/m g o f p ro te in ) 3 S -G C D C u p ta k e (pm o l/m g of p rotein ) G C D C u p ta k e (pm o l/m g of p rotein ) G C D C u p ta k e (p m o l/m g o f p ro te in ) BSEP time courses for human and rat G C D C -B S E P G C D C -r B s e p T im e (m in ) T im e (m in ) H E K B S E P H E K M o c k H E K rb s e p H E K M o c k B S E P -3 S -C D C B S E P -3 S -G C D C T im e (m in ) T im e (m in ) H E K B S E P H E K M o c k H E K B S E P H E K M o c k
27 A T P d e p e n d e n t tr a n s p o rt in H E K B S E P (p m o l/m g /m in ) A T P d e p e n d e n t tr a n s p o rt in H E K B S E P (p m o l/m g /m in ) A T P d e p e n d e n t tr a n s p o rt in H E K B S E P (p m o l/m g /m in ) A T P d e p e n d e n t tr a n s p o rt in H E K r B s e p (p m o l/m g /m in ) BSEP kinetics for human and rat B S E P - G C D C ' r B s e p -G C D C C o n c e n tr a tio n (m M ) C o n c e n tr a tio n (m M ) B S E P -3 S -C D C B S E P -3 S -G C D C C o n c e n tr a tio n (m M ) C o n c e n tr a tio n (m M )
28 C L in t (m l/m g /m in ) C L in t (m l/m g /m in ) Bile salt substrate profiling Efflux transporters B S E P ra tb s e p G C D C 3 S -C D C 3 S -G C D C 0 G C D C
29 C L in t (m l/m g /m in ) C L in t (m l/m g /m in ) C L in t (m l/m g /m in ) Bile salt substrate profiling Influx transporters O A T P 1 B 1 O A T P 1 B * p = * p = G C D C 3 S -C D C 0 G C D C 3 S -C D C 3 S -G C D C r a to a tp 1 b * p = G C D C 3 S -C D C 3 S -G C D C
30 C L in t (m l/m g /m in ) C L in t (m l/m g /m in ) Bile salt substrate profiling Influx transporters O A T P 1 A 2 r a to a tp r 1 a G C D C 0 G C D C 3 S -C D C 3 S -G C D C
31 Heat map based on uptake ratios - human and rat transporters CDC GCDC 3S-CDC 3S-GCDC NTCP OATP1A2 OATP1B1 OATP1B3 BSEP rntcp roatp1a1 roatp1a4 roatp1b2 rbsep CDC GCDC 3S-CDC 3S-GCDC The boxes in red indicate an average POC folds >4, the boxes in orange indicate an average POC folds 4>fold>2.5, the boxes in yellow indicate an average POC folds 2.5>fold>1.5, and the boxes in blue indicate no transport
32 Expression of transporters in human hepatocytes Sandwich cultured human hepatocytes Schaefer 2012 DMD Closed squares: n = 2 or 3; open squares n = 1
33 Human hepatic bile salt transport BS + BS-C BS OATP1A2 OSTαβ BS + BS-C NTCP BS Hepatocyte Blood / Sinusoidal Space BS + BS-C OATP1B1 Phase II BS-C BSEP MRP2 BS + BS-C BS-C Bile / Canaliculus BS + BS-C OATP1B3 MRP3 MRP4 BS-C + BS BS-C
34 Acknowledgements Solvo R&D team Beata Toth Marton Jani Erzsebet Beery Nora Szilvasy Zsuzsanna Gáborik Krisztina Herédi-Szabó Emese Kis Production team Zsolt Sáfár Judit Molnár Anita Kurunczi Emese Kis Bioanalytics group Éva Molnár Pádár Petra Plahi Bognar Agata Zoltán Tömöri Collaborators DILI Consortium Anita Dankers (JnJ) Teresa Heslop (GSK) Y Anne Pak (Lilly) Shelby C Hullett (Lilly) Mike Bayliss (U Liverpool) Neil Kitteringham (U Liverpool) Bhavana Jagota (U Liverpool) Kevin B Park (U Liverpool) Richard W Weaver (Servier) Dept Med Chem, U Szeged Prof Gábor Tóth & lab
35 Sulfated conjugates in the focus In fact, conjugates of bile acids represented 4 of the 12 metabolites significantly associated with OATP1B1 genetic variants. These conjugates also increased following administration of CSA. Yee 2016 CPT Morgan 2010 Tox Sci
36 Regulation Alferai 2007 Pharm Res Dawson 2009 JLR
37 FIC1 deficiency
38 Number of cases Drug induced liver injury % cholestatic: mixed: ALT/AP < 2N 2N< ALT/AP < 5N hepatocellular: ALT/AP > 5N (Classification according to CIOMS) Y. Meier et al., Eur J Clin Pharmacol 61, 135, 2005 Swedish study: almost 50% of DILI cases were cholestatic or mixed (Björnsson & Olssson 2005 Hepatology)
39 Dawson 2009 JLR Bile salt transport
40 Bas/BSs in human and rodent liver and serum Garcia-Canaveras 2012 JLR
41 Composition of the BA/BS pool in human and rat liver and serum % Liver % Serum % % 80.00% 80.00% 60.00% 60.00% 40.00% 20.00% human rat 40.00% 20.00% human rat 0.00% 0.00% Human CDCA:CA=1:1 G:T=2-3.7:1 Rat CDCA:CA=1:2 G:T=1:3-6 Garcia-Canaveras 2012 JLR
42 Heat map based on uptake ratios - human and rat transporters NTCP OATP1A2 OATP1B1 OATP1B3 MRP2 MRP3 BSEP CDC CDC GCDC GCDC 3S-CDC 3S-CDC 3S-GCDC 3S-GCDC CDC GCDC 3S-CDC rntcp roatp1a1 roatp1a4 roatp1b2 CDC GCDC 3S-CDC rmrp2 rmrp3 rbsep 3S-GCDC 3S-GCDC The boxes in red indicate an average POC folds >4, the boxes in orange indicate an average POC folds 4>fold>2.5, the boxes in yellow indicate an average POC folds 2.5>fold>1.5, and the boxes in blue indicate no transport
43 Heat map based on Km - human and rat transporters CDC GCDC 3S-CDC 3S- GCDC CDC GCDC 3S-CDC 3S- GCDC NTCP OATP1A2 OATP1B1 OATP1B3 rntcp roatp1a1 roatp1a4 roatp1b2 CDC GCDC 3S-CDC 3S- GCDC CDC GCDC 3S-CDC 3S- GCDC MRP2 MRP3 BSEP rmrp2 rmrp3 rbsep The boxes in red indicate Km < 1 um, the boxes in orange indicate Km 10>Km>1 um, the boxes in yellow indicate Km >10 um, and the boxes in blue indicate no significant transport
44 Inhibition profiling of human rat and monkey OATPs/Oatps OATP 1A2 OATP 1B1 OATP 1B3 roatp 1a1 roatp 1a4 roatp 1b2 cyoatp 1b1 cyoatp 1b3 OATP 1A2 8/8 OATP 1B1 1/8 8/8 OATP 1B3 1*/8 6/8 8/8 roatp 1a1 5*/8 3/8 7*/8 8/8 roatp 1a4 6*/8 2/8 2/8 4/8 8/8 roatp 1b2 1/8 4/8 5/8 6/8 1/8 8/8 cyoatp 1b1 1/8 7/8 5/8 3/8 2/8 5/8 8/8 cyoatp 1b3 2*/8 3/7 5*/8 6*/8 2/8 7*/8 4/8 8/8 Atorvastatin CCK8 Diclofenac NMQ Pravastatin Taxol Telmisartan Troglitazone Substrate: taurocholate
Na Li, PhD. Application of a Fluorescent Substrate / Inside-Out Transporter Vesicle Assay for Identifying Inhibitors of MRP Transport
Application of a Fluorescent Substrate / Inside-Out Transporter Vesicle Assay for Identifying Inhibitors of MRP Transport Na Li, PhD BD Biosciences October 20, 2010 BD Gentest Transporter Seminar Series
More informationABC Transporter Vesicle Assay: Comparison of Cold (LC-MS/MS) and Hot (Radiolabeled) Methods. Na Li, PhD. BD Biosciences Discovery Labware May 29, 2012
ABC Transporter Vesicle Assay: Comparison of Cold (LC-MS/MS) and Hot (Radiolabeled) Methods Na Li, PhD BD Biosciences Discovery Labware May 29, 212 Today s Topics Overview of the important role of ABC
More informationMetabolically-modified liver models to examine the role of mitochondrial dysfunction in drug-induced liver injury and their relevance to man
Mechanism based Integrated Systems for the Prediction of Drug-Induced Liver Injury Metabolically-modified liver models to examine the role of mitochondrial dysfunction in drug-induced liver injury and
More informationIn Vitro Transporter Testing Alignment with Regulatory Agency Guidelines and ITC Recommendations. Elke S. Perloff, Ph.D.
In Vitro Transporter Testing Alignment with Regulatory Agency Guidelines and ITC Recommendations Elke S. Perloff, Ph.D. BD Biosciences February 23, 2011 Presentation Overview Guidance documents and position
More informationPredicting human hepatic clearance and DDI effects from in vitro metabolism and transport data
Predicting uman epatic clearance and DDI effects from in vitro abolism and transport data Kenici Umeara, Birk Poller, Annett Kunze and Gian Camenisc Novartis Parma AG, DMPK DDI-2015, International Conference
More informationImaging Bile Canaliculi in 3D Liver Microtissues using the Opera Phenix High-Content Screening System
APPLICATION NOTE Cholestasis Cellular Imaging and Analysis Liver Tox Bile Canaliculi Area Key Features: Quantification of bile efflux transporter activity in 3D liver microtissues High quality confocal
More informationGenetically Modified Human Renal Proximal Tubule Epithelial Cells (RPTEC/TERT1) A New Model for Drug Toxicity Studies
Genetically Modified Human Renal Proximal Tubule Epithelial Cells (RPTEC/TERT1) A New Model for Drug Toxicity Studies Chaozhong Zou, Ph.D. Senior Scientist, ATCC About ATCC Founded in 1925, ATCC is a non-profit
More informationSupplemental material to this article can be found at:
Supplemental material to this article can be found at: http://dmd.aspetjournals.org/content/suppl/2012/09/07/dmd.112.047068.dc1 1521-009X/12/4012-2332 2341$25.00 DRUG METABOLISM AND DISPOSITION Vol. 40,
More informationNavigating the Transporter Wave of 2013: A Review of the Seven Recent ITC Publications on Drug Transporters
Navigating the Transporter Wave of 2013: A Review of the Seven Recent ITC Publications on Drug Transporters Greg Loewen, Andrea Wolff, Amanda Hays, Ph.D. XenoTech Drug Transport Group XenoTech brief introduction
More informationOrgan-on-a-chip: practical applications & challenges. Remko van Vught
Organ-on-a-chip: practical applications & challenges Remko van Vught 10-4-2018 A leap forward in physiological relevance The challenge of reductionism: Make things as simple as possible, but not simpler,
More informationINVESTIGATION OF A BICYCLO [1.1.1]PENTANE AS A PHENYL REPLACEMENT WITHIN AN LpPLA 2 INHIBITOR
INVESTIGATION OF A BICYCLO [1.1.1]PENTANE AS A PHENYL REPLACEMENT WITHIN AN LpPLA 2 INHIBITOR Measom, N. D.; Down, K. D.; Hirst, D. J.; Jamieson, C.; Manas, E. S.; Patel, V. K.; and Somers, D. O. Celeste
More informationAntibiotic efflux pumps in eucaryotic cells: consequences for activity against intracellular bacteria
Antibiotic efflux pumps in eucaryotic cells: consequences for activity against intracellular bacteria Françoise Van Bambeke on behalf of J.M. Michot, C. Seral, M. Heremans, M.P. Mingeot-Leclercq, P.M.
More informationGI Microbiota. Human Intestinal Symbiotes. Neurological Disorders. Diabetes. Autoimmune. Heart Disease. Cancer. Inflammation.
GI Microbiota Human Intestinal Symbiotes Neurological Disorders Diabetes Autoimmune Heart Disease 100s Species Millions Genes Trillions Cells Cancer Inflammation Chemical Toxicity Mammalian Xenobiotic
More informationFunctional and structural relevance of conserved positively charged. lysine residues in organic anion transporting polypeptide 1B3
Molecular Pharmacology This article has not Fast been Forward. copyedited and Published formatted. The on final June version 3, 2011 may differ as doi:10.1124/mol.111.071282 from this version. MOL #71282
More informationAntibiotic efflux pumps in eucaryotic cells: consequences for activity against intracellular bacteria
Antibiotic efflux pumps in eucaryotic cells: consequences for activity against intracellular bacteria Unité de Pharmacologie cellulaire et moléculaire F. Van Bambeke Magic bullets need to reach their target
More informationEnergy Transformation, Cellular Energy & Enzymes (Outline)
Energy Transformation, Cellular Energy & Enzymes (Outline) Energy conversions and recycling of matter in the ecosystem. Forms of energy: potential and kinetic energy The two laws of thermodynamic and definitions
More informationMembrane transport 1. Summary
Membrane transport 1. Summary A. Simple diffusion 1) Diffusion by electrochemical gradient no energy required 2) No channel or carrier (or transporter protein) is needed B. Passive transport (= Facilitated
More informationIntroduction to Pharmacokinetic Modelling Rationale
Introduction to Pharmacokinetic Modelling Rationale Michael Weiss michael.weiss@medizin.uni-halle.de Martin Luther University Halle-Wittenberg Philippus von Hohenheim, known as Paracelsus (1493-1541) Everything
More informationReview Cellular Models and In Vitro Assays for the Screening of modulators of P-gp, MRP1 and BCRP
Review Cellular Models and In Vitro Assays for the Screening of modulators of P-gp, MRP1 and BCRP Mariline Gameiro, Renata Silva *, Carolina Rocha-Pereira *, Helena Carmo, Félix Carvalho, Maria de Lourdes
More informationBASIC BIOLOGICAL PRINCIPLES
BASIC BIOLOGICAL PRINCIPLES A1 A1. Basic Biological Principles 1. Describe the characteristics of life shared by all prokaryotic and eukaryotic organisms 2. Compare cellular structures and their function
More informationValidation of the GastroPlus TM Software Tool and Applications
Validation of the GastroPlus TM Software Tool and Applications Fagen Zhang and Leah Luna The Dow Chemical Company FZ/MB 01.11.11 Acknowledgements Michael Bartels Barun Bhhatarai (Novartis) Tyler Auernhammer
More informationTransport of glucose across epithelial cells: a. Gluc/Na cotransport; b. Gluc transporter Alberts
Figure 7 a. Secondary transporters make up the largest subfamily of transport proteins. TAGI 2000. Nature 408, 796 1. Na+- or H+-coupled cotransporters - Secondary active transport 2/7-02 Energy released
More informationHuman Creatinine Serum Detection Kit
Human Creatinine Serum Detection Kit Catalog No: IRAAKT2508 Lot No: SAMPLE INTENDED USE The Serum Creatinine kit is designed to quantitatively measure creatinine present in serum samples. Please read the
More informationDissociation from albumin: A potentially rate-limiting step in the
Proc. Nail. Acad. Sci. USA Vol. 82, pp. 1563-1567, March 1985 Physiological Sciences Dissociation from albumin: A potentially rate-limiting step in the clearance of substances by the liver (drug binding/organic
More informationNew developments in PK/PD
Asian PK/PD Educational Workshop New developments in PK/PD drug transport in eucaryotic cells difficult-to-reach compartments intracellular infections This part uses material from presentations made at
More informationMULTIPLE TRANSPORT PROTEINS INVOLVED IN THE DETOXIFICATION OF ENDO- AND XENOBIOTICS
[Frontiers in Bioscience 2, d427-437, September 15, 1997] MULTIPLE TRANSPORT PROTEINS INVOLVED IN THE DETOXIFICATION OF ENDO- AND XENOBIOTICS Yogesh C. Awasthi 1,2, Sanjay Awasthi 3, and Piotr Zimniak
More informationChem Lecture 9 Pumps and Channels Part 1
Chem 45 - Lecture 9 Pumps and Channels Part 1 Question of the Day: What two factors about a molecule influence the change in its free energy as it moves across a membrane? Membrane proteins function as
More informationSystematic approaches to study cancer cell metabolism
Systematic approaches to study cancer cell metabolism Kivanc Birsoy Laboratory of Metabolic Regulation and Genetics The Rockefeller University, NY Cellular metabolism is complex ~3,000 metabolic genes
More informationb) What is the gradient at room temperature? Du = J/molK * 298 K * ln (1/1000) = kj/mol
Chem350 Practice Problems Membranes 1. a) What is the chemical potential generated by the movement of glucose by passive diffusion established by a 1000 fold concentration gradient at physiological temperature?
More informationMouse Creatinine Urinary Detection Kit
Mouse Creatinine Urinary Detection Kit Catalog No: IRAAKT2549 Lot No: SAMPLE INTENDED USE BACKGROUND Creatinine (2 amino 1 methyl 5H imadazol 4 one) is a metabolite of phosphocreatine (p creatine), a molecule
More informationLecture 5: Uptake, metabolism and excretion of xenobiotics
Environmental issues and hazards in the chemical research laboratory Lecture 5: Uptake, metabolism and excretion of xenobiotics Ulf Ellervik Lecture 5 - outline 1. Introduction 2. Uptake of chemicals 3.
More informationAntibiotic resistance: a real and present danger in our hospitals
Antibiotic resistance: a real and present danger in our hospitals http://www.latimes.com/business/la-fi-hospital-infections-20150218-story.html#page=1 2 The search for new antibacterials HTS based on genetically
More informationQuantitative Pooling of Michaelis-Menten Equations in Models with Parallel Metabolite Formation Paths
Journal of Pharmacokinetics and Biopharmaceutics, Vol. 2, No. 2, I974 Quantitative Pooling of Michaelis-Menten Equations in Models with Parallel Metabolite Formation Paths Allen J. Sedman ~ and John G.
More informationHuman organic anion transporter 1B1 and 1B3 function as bidirectional carriers and do not mediate GSH-bile acid cotransport
Am J Physiol Gastrointest Liver Physiol 293: G271 G278, 2007. First published April 5, 2007; doi:10.1152/ajpgi.00075.2007. Human organic anion transporter 1B1 and 1B3 function as bidirectional carriers
More informationD-Lactate Fluorometric/Colorimetric Assay Kit
D-Lactate Fluorometric/Colorimetric Assay Kit Catalog No. KM0096 Detection and Quantification of D-Lactate Concentrations in Biological Samples. Research Purposes Only. Not Intended for Diagnostic or Clinical
More informationSpecies differences in sinusoidal and canalicular efflux transport of mycophenolic acid 7-O-glucuronide in sandwich-cultured hepatocytes
ORIGINAL ARTICLE Species differences in sinusoidal and canalicular efflux transport of mycophenolic acid 7-O-glucuronide in sandwich-cultured hepatocytes Kazuhiro Tetsuka, Nicolas Gerst, Kouichi Tamura
More informationReginald Kavishe Department of Pharmacology/Toxicology Radboud University Medical Centre NCMLS & Kilimanjaro Christian Medical Centre, Tanzania
Reginald Kavishe Department of Pharmacology/Toxicology Radboud University Medical Centre NCMLS & Kilimanjaro Christian Medical Centre, Tanzania ABC = ATP-binding cassette proteins Most are membrane transporters
More informationEstimation of biliary excretion of foreign compounds using properties of molecular structure
1 2 3 4 Estimation of biliary excretion of foreign compounds using properties of molecular structure Mohsen Sharifi, Taravat Ghafourian* Medway School of Pharmacy, Universities of Kent and Greenwich, Chatham,
More informationSupporting Information
Supporting Information Theoretical Approach for Determination of True Quantitative Values of Proteins in Pure Membrane Fraction. During the preparation of membrane fractions, some contamination with other
More informationResolution of organic racemates via host-guest enantioselective inclusion complexation in bile acid derivatives
Issue in onor of Prof. Giuseppe Bartoli ARKIVC 2006 (vi) 40-48 Resolution of organic racemates via host-guest enantioselective inclusion complexation in bile acid derivatives. Bortolini, a, * G. Fantin,
More informationEarly Stages of Drug Discovery in the Pharmaceutical Industry
Early Stages of Drug Discovery in the Pharmaceutical Industry Daniel Seeliger / Jan Kriegl, Discovery Research, Boehringer Ingelheim September 29, 2016 Historical Drug Discovery From Accidential Discovery
More informationACTIVE TRANSPORT AND GLUCOSE TRANSPORT. (Chapter 14 and 15, pp and pp )
ACTIVE TRANSPORT AND GLUCOSE TRANSPORT (Chapter 14 and 15, pp 140-143 and pp 146-151) Overview Active transport is the movement of molecules across a cell membrane in the direction against their concentration
More informationHIGH-THROUGHPUT DETERMINATION OF AQUEOUS SOLUBILITY, PRECIPITATION OR COLLOIDAL AGGREGATE FORMATION IN SMALL MOLECULE SCREENING SETS
HIGH-THROUGHPUT DETERMINATION OF AQUEOUS SOLUBILITY, PRECIPITATION OR COLLOIDAL AGGREGATE FORMATION IN SMALL MOLECULE SCREENING SETS Introduction: Determining the aqueous solubility of a compound is an
More informationE4 Acids, Bases, and Salts
E4 Acids, Bases, and Salts Session One of two session lab Complete Parts 1 and 2 in lab. If time allows, start or complete Part 3. Acids and Bases Q. Are acid-base properties of substances predictable
More informationAlcohol dehydrogenase Assay Kit
Alcohol dehydrogenase Assay Kit Catalog Number KA3785 100 assays Version: 02 Intended for research use only www.abnova.com Table of Contents Introduction... 3 Intended Use... 3 Background... 3 General
More informationEnergy Transformation and Metabolism (Outline)
Energy Transformation and Metabolism (Outline) - Definitions & Laws of Thermodynamics - Overview of energy flow ecosystem - Biochemical processes: Anabolic/endergonic & Catabolic/exergonic - Chemical reactions
More informationInvolvement of Multiple Transporters in the Efflux of 3- Hydroxy-3-methylglutaryl-CoA Reductase Inhibitors across the Blood-Brain Barrier
0022-3565/04/3113-1147 1153$20.00 THE JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS Vol. 311, No. 3 Copyright 2004 by The American Society for Pharmacology and Experimental Therapeutics 71621/1179070
More informationMRP4 and platelets Demokritos C Tsoukatos
MRP4 and platelets Demokritos C Tsoukatos Laboratory of Biochemistry Department of Chemistry University of Ioannina MRP 4 Multidrug resistance protein 4 (MRP4) is a member of the MRP/ABCC subfamily of
More informationUse of fluorescent probes to monitor the efflux transporters P- Glycoprotein and MRP1 in BeWo cells.**
]. Natn.Sci.Foundation Sri Lanka 2007 35(1): 19-27 RESEARCH ARTICLE Use of fluorescent probes to monitor the efflux transporters P- Glycoprotein and MRP1 in BeWo cells.** DJVedra Karunaratne 1 * and Kenneth
More informationThallium and Rubidium Permeability of Human and Rat Erythrocyte Membrane
Gen. Physiol. Biophys. (1990), 9, 39 44 39 Thallium and Rubidium Permeability of Human and Rat Erythrocyte Membrane I. A. SKULSKII, V. MANNINEN* and V. V. GLASUNOV Institute of Evolutionary Physiology
More informationCreatinine Colorimetric Detection Kit
Creatinine Colorimetric Detection Kit For the quantitative determination of creatinine in urine. For Research Use Only. Not For Use In Diagnostic Procedures. Catalog Number: 74-CRNHU-E02 Size: 2x96 Wells
More informationOctreotide inhibits the bilirubin carriers Organic Anion Transporting. Polypeptides (OATP) 1B1 and 1B3 and the Multidrug Resistance Associated
Octreotide inhibits the bilirubin carriers Organic Anion Transporting Polypeptides (OATP) 1B1 and 1B3 and the Multidrug Resistance Associated Protein 2 (MRP2) Michele Visentin, Bruno Stieger, Michael Merz,
More informationMyBioSource.com. Na + /K + ATPase Microplate Assay Kit. User Manual. Catalog # Detection and Quantification of Na + /K + ATPase activity in Urine,
Na + /K + ATPase Microplate Assay Kit Catalog # User Manual Detection and Quantification of Na + /K + ATPase activity in Urine, Serum, Plasma, Tissue extracts, Cell lysate, Cell culture media and Other
More informationThe Longer Life Foundation Pilot/Feasibility Grant Application FINAL REPORT
The Longer Life Foundation Pilot/Feasibility Grant Application FINAL REPORT Diagnostic and therapeutic applications of a novel plasma metabolite, nicotinamide mononucleotide (NMN), for age-associated metabolic
More informationDOWNLOAD OR READ : MITOCHONDRIAL FUNCTION AND DYSFUNCTION PDF EBOOK EPUB MOBI
DOWNLOAD OR READ : MITOCHONDRIAL FUNCTION AND DYSFUNCTION PDF EBOOK EPUB MOBI Page 1 Page 2 mitochondrial function and dysfunction mitochondrial function and dysfunction pdf mitochondrial function and
More informationCh. 2 BASIC CHEMISTRY. Copyright 2010 Pearson Education, Inc.
Ch. 2 BASIC CHEMISTRY Matter and Composition of Matter Definition: Anything that has mass and occupies space Matter is made up of elements An element cannot be broken down by ordinary chemical means Atoms
More information13-3. Synthesis-Secretory pathway: Sort lumenal proteins, Secrete proteins, Sort membrane proteins
13-3. Synthesis-Secretory pathway: Sort lumenal proteins, Secrete proteins, Sort membrane proteins Molecular sorting: specific budding, vesicular transport, fusion 1. Why is this important? A. Form and
More informationHandling parameter constraints in complex/mechanistic population pharmacokinetic models
Handling parameter constraints in complex/mechanistic population pharmacokinetic models An application of the multivariate logistic-normal distribution Nikolaos Tsamandouras Centre for Applied Pharmacokinetic
More informationChapter 2 1. Using an annotated diagram, describe the structure of a plant cell. (12 marks)
Essays Chapter 2 1. Using an annotated diagram, describe the structure of a plant cell. 2. Compare and contrast the structure of prokaryotic cells and eukaryotic cells. 3. Describe the correct procedures
More informationhealthy volunteers. Data on 2 normal sera, examined after 5 and 6 months respectively in the ice-box, are also
THE RELATION OF CEPHALIN FLOCCULATION AND COLLOIDAL GOLD REACTIONS TO THE SERUM PROTEINS 1 By ELVIN A. KABAT, FRANKLIN M. HANGER, DAN H. MOORE, AND HAROLD LANDOW 2 (From the Departments of Neurology and
More informationApplications of multi-class machine
Applications of multi-class machine learning models to drug design Marvin Waldman, Michael Lawless, Pankaj R. Daga, Robert D. Clark Simulations Plus, Inc. Lancaster CA, USA Overview Applications of multi-class
More informationChemistry 112 Final Exam, Part II February 16, 2005
Name KEY. (35 points) Consider the reaction A + B + C + D + E + F Æ P, which has a rate law of the following form: d[p]/dt = k[a]a[b]b[c]c[d]d[e]e[f]f The data sets given or displayed below were obtained
More informationLab 3 Molecular Level of Organization
Lab 3 Molecular Level of Organization Laboratory Objectives List and describe common biomolecules. Identify the monomers and polymers of lipids, carbohydrates, and proteins. Describe the formation of polar
More informationPrerequisites Properties of allosteric enzymes. Basic mechanisms involving regulation of metabolic pathways.
Case 16 Allosteric Regulation of ATCase Focus concept An enzyme involved in nucleotide synthesis is subject to regulation by a variety of combinations of nucleotides. Prerequisites Properties of allosteric
More informationCompounds Part 1: Ionic Cpds - Formula Units & Nomenclature (29:15) Video Tutorial Lecture Notes
Exam 1 Video Tutorials and Activities beginning of lecture for exam 1. The materials need to be organized according to the TOC for FULL credit. Refer to the Video/Activity grading rubric. Exam 1 is based
More informationGlutathione S-Transferase (GST) Alpha ELISA
Package Insert Glutathione S-Transferase (GST) Alpha ELISA 96 Wells For Research Use Only v. 1.1 (10.19.17) Eagle Biosciences, Inc. 20A NW Blvd, Suite 112, Nashua, NH 03063 Phone: 866-419-2019 Fax: 617-419-1110
More informationProportion of Arabidopsis genes in different functions. 5% of genome consists of transporters (>1000 genes)
Membranes are crucial to the life of the cell 1. PM define boundary of cell, and maintains difference between cytosol and external environment. Inside, organelles are distinct from one another. 2. Membrane
More informationSyllabus: PHARMACEUTICAL CHEMISTRY Ι. Code number: 48 Cycle: Undergraduate Semester: 5th semester. Course type
Syllabus: PHARMACEUTICAL CHEMISTRY Ι Code number: 48 Cycle: Undergraduate Semester: 5th semester Course type Χ Background/General knowledge Scientific area (pharmacy) Credit Units (ECTS): 6.5 Lectures
More informationThe Proton Motive Force. Overview. Compartmentalization 11/6/2015. Chapter 21 Stryer Short Course. ATP synthesis Shuttles
The Proton Motive Force Chapter 21 Stryer Short Course Redox reactions Electron transport chain Proton gradient Overview ATP synthesis Shuttles Analogy: How does burning coal put flour in the grocery store?
More informationDifferential Scanning Fluorimetry: Detection of ligands and conditions that promote protein stability and crystallization
Differential Scanning Fluorimetry: Detection of ligands and conditions that promote protein stability and crystallization Frank Niesen PX school 2008, Como, Italy Method introduction Topics Applications
More informationChapter 8 Notes. An Introduction to Metabolism
Chapter 8 Notes An Introduction to Metabolism Describe how allosteric regulators may inhibit or stimulate the activity of an enzyme. Objectives Distinguish between the following pairs of terms: catabolic
More informationIsothermal Titration Calorimetry in Drug Discovery. Geoff Holdgate Structure & Biophysics, Discovery Sciences, AstraZeneca October 2017
Isothermal Titration Calorimetry in Drug Discovery Geoff Holdgate Structure & Biophysics, Discovery Sciences, AstraZeneca October 217 Introduction Introduction to ITC Strengths / weaknesses & what is required
More informationRoadblocks in HTS Assay Development
Roadblocks in HTS Assay Development Average HTS biochemical assay development time = 4.1 months One off assay development is typically required for each enzyme class Novel or complex targets can be difficult
More informationChapter 5 Ground Rules of Metabolism Sections 1-5
Chapter 5 Ground Rules of Metabolism Sections 1-5 5.1 A Toast to Alcohol Dehydrogenase In the liver, the enzyme alcohol dehydrogenase breaks down toxic ethanol to acetaldehyde, an organic molecule even
More information!"#$%&'%()*%+*,,%-&,./*%01%02%/*/3452*%3&.26%&4752*,,*1%%
!"#$%&'%()*%+*,,%-&,./*%01%02%/*/3452*%3&.26%&4752*,,*1%% !"#$%&'(")*++*%,*'-&'./%/,*#01#%-2)#3&)/% 4'(")*++*% % %5"0)%-2)#3&) %%% %67'2#72'*%%%%%%%%%%%%%%%%%%%%%%%4'(")0/./% % 8$+&'&,+"/7 % %,$&7&/9)7$*/0/%%%%%%%%%%
More informationA) at equilibrium B) endergonic C) endothermic D) exergonic E) exothermic.
CHEM 2770: Elements of Biochemistry Mid Term EXAMINATION VERSION A Date: October 29, 2014 Instructor: H. Perreault Location: 172 Schultz Time: 4 or 6 pm. Duration: 1 hour Instructions Please mark the Answer
More informationROLE OF BASOLATERAL EFFLUX TRANSPORTERS IN INTESTINAL ABSORPTION OF DRUGS AND PRODRUGS. Xin Ming
ROLE OF BASOLATERAL EFFLUX TRANSPORTERS IN INTESTINAL ABSORPTION OF DRUGS AND PRODRUGS Xin Ming A dissertation submitted to the faculty of the University of North Carolina at Chapel Hill in partial fulfillment
More informationAbiotic Stress in Crop Plants
1 Abiotic Stress in Crop Plants Mirza Hasanuzzaman, PhD Professor Department of Agronomy Sher-e-Bangla Agricultural University E-mail: mhzsauag@yahoo.com Stress Stress is usually defined as an external
More informationDelivery. Delivery Processes. Delivery Processes: Distribution. Ultimate Toxicant
Delivery Ultimate Toxicant The chemical species that reacts with the endogenous target. Toxicity depends on the concentration (dose) of the ultimate toxicant at the target site Delivery Processes Absorption
More informationPractical applications of TIRF microscopy
Practical applications of TIRF microscopy Evgeny Pryazhnikov University of Helsinki, Neuroscience Center Functional and Morphological Plasticity of the Tripartite Synapse Vesicular release ATP Perisynaptic
More informationRho1 binding site PtdIns(4,5)P2 binding site Both sites
localization Mutation site DMSO LatB WT F77A I115A I131A K134A Rho1 binding site PtdIns(4,5)P2 binding site Both sites E186A E199A N201A R84A-E186A-E199A L131A-K136A-E186A L131A-E186A-E199A K136A-E186A-E199A
More informationMULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question. 1)
MULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question. 1) 1) Which of the following statements about the atom A) It has 12 neutrons in its nucleus. B) It
More informationIntroduction and. Properties of Enzymes
Unit-III Enzymes Contents 1. Introduction and Properties of enzymes 2. Nomenclature and Classification 3. Mechanism of enzyme-catalyzed reactions 4. Kinetics of enzyme-catalyzed reactions 5. Inhibition
More informationATP Fluorometric/Colorimetric Assay Kit
ATP Fluorometric/Colorimetric Assay Kit Catalog No. KM0028 Detection and Quantification of ATP Concentrations in Biological Samples. Research Purposes Only. Not Intended for Diagnostic or Clinical Procedures.
More informationE4 Acids, Bases, and Salts
E4 Acids, Bases, and Salts Session One of two session lab Complete Parts 1 and 2 in lab. If time allows, start or complete Part 3. Reminder: Prelab report, page 112, due at start of lab. Acids and Bases
More informationSystems II. Metabolic Cycles
Systems II Metabolic Cycles Overview Metabolism is central to cellular functioning Maintenance of mass and energy requirements for the cell Breakdown of toxic compounds Consists of a number of major pathways
More informationPlan. Day 2: Exercise on MHC molecules.
Plan Day 1: What is Chemoinformatics and Drug Design? Methods and Algorithms used in Chemoinformatics including SVM. Cross validation and sequence encoding Example and exercise with herg potassium channel:
More informationMULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question. Figure 2.1
Exam Name MULTIPLE CHOICE. Choose the one alternative that best completes the statement or answers the question. Figure 2.1 1) Which compound in Figure 2.1 is an ester? 1) A) a b c d e Answer: D 2) A scientist
More informationThree hour lab. Chem : Sept Experiment 2 Session 2. Preparation Pre-lab prep and reading for E2, Parts 3-5
Chem.25-26: Sept.24-3 Experiment 2 Session 2 Preparation Pre-lab prep and reading for E2, Parts 3-5 Experiment 2 Session 2 Electrons and Solution Color Three hour lab Complete E2 (Parts - 5) Prepare discussion
More information20. Electron Transport and Oxidative Phosphorylation
20. Electron Transport and Oxidative Phosphorylation 20.1 What Role Does Electron Transport Play in Metabolism? Electron transport - Role of oxygen in metabolism as final acceptor of electrons - In inner
More informationWHAT REGULATES RESPIRATION IN MITOCHONDRIA?
Vol. 39, No. 2, May 1996 BIOCHEMISTRY and MOLECULAR BIOLOGY INTERNATIONAL Pages 415-4 ] 9 WHAT REGULATES RESPIRATION IN MITOCHONDRIA? Bernard Korzeniewski Institute of Molecular Biology, Jagiellonian University,
More informationMetabolic diversity is based on the Electron donors, acceptors, and carbon sources available - thermodynamics
To date you have covered microbial community sampling using molecular techniques to identify who is present in the environment. You have also looked at various genetic mechanisms to understand how organisms
More informationOxidative Phosphorylation
Paper : 04 Metabolism of carbohydrates Module : 15 Principal Investigator Paper Coordinator Content Reviewer Content Writer Dr.S.K.Khare,Professor IIT Delhi. Dr. Ramesh Kothari,Professor UGC-CAS Department
More informationMechanisms of Drug Action Lecture #1 9/7/05
20.201 Mechanisms of Drug Action Lecture #1 9/7/05 Instructors Prof. Peter Dedon Prof. Steven Tannenbaum Monday and Wednesday 1:30-3:00 pm Recitations on Friday 1:30-2:30 pm 1 Course bjectives Develop
More informationActive Efflux across the Blood-Brain Barrier: Role of the Solute Carrier Family
NeuroRx : The Journal of the American Society for Experimental NeuroTherapeutics Active Efflux across the Blood-Brain Barrier: Role of the Solute Carrier Family Hiroyuki Kusuhara and Yuichi Sugiyama Graduate
More informationReturn on Investment in Discovery Chiral Separations
Return on Investment in Discovery Chiral Separations Averica Discovery Services 260 Cedar Hill Street Marlborough MA 01752 www.avericadiscovery.com @averica_feed What Should I Spend? Understanding ROI
More informationCharacterization of Reversible Kinase Inhibitors using Microfluidic Mobility-Shift Assays
Application Note 211 Characterization of Reversible Kinase Inhibitors using Microfluidic Mobility-Shift Assays Introduction Current drug discovery efforts typically focus on developing small molecule inhibitors
More informationCellular Metabolic Models
Cellular Metabolic Models. Cellular metabolism. Modeling cellular metabolism. Flux balance model of yeast glycolysis 4. Kinetic model of yeast glycolysis Cellular Metabolic Models Cellular Metabolism Basic
More information[This document contains the author s accepted manuscript. For the publisher s version, see the link in the header of this document.
Mitra, P. and Audus, K.L. (2010) Multidrug resistance-associated protein (MRP) isoforms and the breast cancer resistance protein (BCRP) mediate sulfate conjugate efflux out of BeWo cells. Int. J. Pharm.
More informationREVIEW 1: BIOCHEMISTRY UNIT. A. Top 10 If you learned anything from this unit, you should have learned:
Period Date REVIEW 1: BIOCHEMISTRY UNIT A. Top 10 If you learned anything from this unit, you should have learned: 1. All living matter made up of CHONPS 2. Bonds a. covalent bonds are strong b. hydrogen
More information