Charge-Transfer and Dispersion Energies in Water Clusters

Size: px
Start display at page:

Download "Charge-Transfer and Dispersion Energies in Water Clusters"

Transcription

1 II.26 Charge-Transfer and Dispersion Energies in Water Clusters Suehiro Iwata 1,2, Pradipta Bandyopadhyay 3, Sotiris S. Xantheas 4 1)Toyota Physical and Chemical Research Institute ( , fellow) 2) Faculty of Science and Engineering, Keio Univ. (2012, visiting Prof.) 3) Jawaharlar Nehru University 4) Pacific Northwest National Laboratory 1

2 Purpose for a series of the research To find a practical way to study the molecular clusters consisting of many molecular units with the effect of the BSSE as small as possible. Present status The purpose was accomplished at the closed shell Hartree- Fock level by the 2nd and 3rd order Single excitation Perturbation Theory based on Locally Projected Molecular Orbitals (LP MO 2&3SPT). Now the dispersion term can be evaluated with the LP MO double excitation perturbation theory. Now it is time to use the studies of the molecular clusters. 2

3 Locally Projected Molecular Orbitals (LP MO) and the many-electron wave function for a cluster a Slater determinant mol Ψ LPMO PT = Φ LP MO + a X r X A ax,r X + b X s Y mol mol X a,r X mol X mol Y>X b X s Y Local Excitation Charge-Transfer + a X b Y r X s Y A ax,r X,b Y,s Y + a X b X r X s X X Y>X a,r X b,s Y mol X a,r X b,s X Dispersion type Intra-molecule correlation A bx,s Y A ax,r X,b X,s X determined with the perturbation theory The MO coefficient matrix is block-diagonal as The coefficient matrix is determined variationaly under the absolute locality constraint. The excited MOs can be determined under the locality condition using a proper projection operator. Reference:1)JPC A114(2010)8697, 2)JCP 135(2011) , 3)PCCP 14(2012)7787 3

4 Binding Energy in LP MO 2nd &3rd order Single Excitation + Dispersion correction E BindE LP MO E Φ ( LP MO ) HF E X X electrostatic + induction + exch. repulsion E 2&3SPT LP BindE E MO BindE + E 2&3SPT CP corrected HF E BindE SPT + Disp E E + E + E 2&3 LPMO 2&3SPT 2 DPT _ Disp BindE BindE if the augument functions are used Some features of LP MO PT No charge-transfer (CT, electron delocalizaion) between the LP molecules is allowed in MO (Φ LP MO ). E BindE CT type single excitations make correction of the binding energy, and the energy evaluated with the 2nd and 3rd order perturbation theory (2&3SPT) is close to the counterpoise corrected Hartree- Fock energy. Dispersion type excitations can be selected in the 2nd order perturbation theory without introducing the configuration basis inconsistency (BSSE). 4

5 A uniqueness of the method is that once the first order wave function was obtained, the CT and dispersion terms can be evaluated for every pair of molecules in the cluster without an extra heavy computation. The method is applied to water clusters (H2O)11. The number of possible digraphs of (H2O)11 is 460,066,726. The number of stable isomers is much smaller than that. The prescreening with the empirical potential using various searching algorithms is required. In addition to the published isomers (Bulusu, Yoo, Apra, Xantheas, Zeng, JPC A 110 (2006) 11781), the new isomers are found. All geometries are fully optimized with MP2/aug-cc-pvdz. NWChem package was used for the optimization. 5

6 Isomers examined X434 X515 X443 X551 PX3189 PI1226 X4412 PI2476 PX4205 PI2877 Label of PZssss is a new isomer. 6

7 Relative Binding Energy [Reference: ~-420kJ/mol with Dispersion energy] The discrepancy of LPMO 2&3SPT +Disp from MP2 is about 4kJ/mol all within~10kj/mol What is the determining factor of the relative stability? 7

8 Relative Binding Energy and Energy Decomposition SPT + Disp E E + E + E 2&3 LPMO 2&3SPT 2 DPT _ Disp BindE BindE LP E MO BindE electrostatic + induction + exch. repulsion E 2&3SPT E CT E 2DPT_Disp The dispersion term is the largest contribution to the binding energy, but it does not necessarily mean it determines the most stable isomer. 8

9 The correlation of the O--O distance with the CT and dispersion energies CT Strong correlation between E pair Dispersion and E pair Hydrogen bonding E CT pair, defined by LP MO 2&3SPT, is a good measure for the measure of the hydrogen bond strength. 9

10 The relation of the CT and dispersion energies, and the type of hydrogen donor waters A water molecule in the cluster is classified by DnAm, where n is the number of donating hydrogens, and m is the number of accepting hydrogens in the molecule. The strong hydrogen bond if the hydrogen donor water is of type D1A2. 10

11 The relation of the CT and dispersion energies, and the type of hydrogen acceptor waters The strong hydrogen bond if the hydrogen acceptor water is of type D2A1. The hydrogen bond between D1A2 as hydrogen donor and D2A1 as hydrogen acceptor is stronger than the other types of hydrogen bonds, and the effects are cooperative of the dispersion and CT terms. 11

12 Structural characteristics of the clusters and the relative stability Cluster The number of HBs H donor - H acceptor D1A2- D2A1 the number of waters rings c) D1A1 D2A1 D1A2 D2A2 n4,n5,n6 c) X b 0 6,2,2 X ,4,1 X ,4,3 X ,2,1 PX ,5,3 PI ,2,3 X ,2,3 PI ,2,3 PX ,3,4 PI a ,0,5 a) A pair D1A2-D2A2 is included. b) D1A3 is included c) The number of ns membered rings in the cluster Roughly, the numbers of D1A2-D2A1 pairs, D2A1 waters and D1A2 waters correlate with the relative stability. 12

13 Examples of the detailed analysis X434 [6, 2, 2] PX3189 [3, 5, 3] w11 w10 w2 w9 w1 w2 w3 CT w4 w w8 w w7 w Disp w3 w w w7 w5 w6 w10 w w4 w8(o22) is D1A3 6 membered rings: membered rings:

14 Summary Charge-Transfer energy of a hydrogen bonded water molecules is well-correlated with the dispersion energy of the pair, and it is a good measure of the strength of the hydrogen bonds. Hydrogen bond of a D1A2 type water as a hydrogen donor and a D2A1 type water as a hydrogen acceptor is stronger than that of the other types. So if the cluster has many these types of bonds, it is more stable than the others. More systematic studies of larger hydrogen-bonded clusters of more complex networks are required. The present theoretical technique makes it possible with the parallel implementation. The effect of the intramolecular correlation on the hydrogen bond has to be examined, and the efficient way should be developed without the configuration basis inconsistency (CBI). 14

15 The work is a tribute to the memory of Dr. Takeshi Nagata, with whom this series of research was started in summer of 2000 in Hiroshima. 15

Electronic structure theory: Fundamentals to frontiers. VI. Analysis and more.

Electronic structure theory: Fundamentals to frontiers. VI. Analysis and more. Electronic structure theory: Fundamentals to frontiers. VI. Analysis and more. MARTIN HEAD-GORDON Department of Chemistry, University of California, Berkeley, and, Chemical Sciences Division, Lawrence

More information

Electron Correlation Methods

Electron Correlation Methods Electron Correlation Methods HF method: electron-electron interaction is replaced by an average interaction E HF c = E 0 E HF E 0 exact ground state energy E HF HF energy for a given basis set HF E c

More information

Towards gas-phase accuracy for condensed phase problems

Towards gas-phase accuracy for condensed phase problems Towards gas-phase accuracy for condensed phase problems Fred Manby Centre for Computational Chemistry, School of Chemistry University of Bristol STC 2006: Quantum Chemistry Methods and Applications Erkner,

More information

Electric properties of molecules

Electric properties of molecules Electric properties of molecules For a molecule in a uniform electric fielde the Hamiltonian has the form: Ĥ(E) = Ĥ + E ˆµ x where we assume that the field is directed along the x axis and ˆµ x is the

More information

A. MP2 - Inclusion of counterpoise in the optimisation step

A. MP2 - Inclusion of counterpoise in the optimisation step A. MP2 - Inclusion of counterpoise in the optimisation step Figure S1. Top and side views of the M_FS_SF_A and M_FS_SF_R IP-dimer structures computed at the MP2 level with (orange) and without (blue) counterpoise

More information

Why Is Molecular Interaction Important in Our Life

Why Is Molecular Interaction Important in Our Life Why Is Molecular Interaction Important in ur Life QuLiS and Graduate School of Science iroshima University http://www.nabit.hiroshima-u.ac.jp/iwatasue/indexe.htm Suehiro Iwata Sept. 29, 2007 Department

More information

Uptake of OH radical to aqueous aerosol: a computational study

Uptake of OH radical to aqueous aerosol: a computational study Uptake of OH radical to aqueous aerosol: a computational study Grigory Andreev Karpov Institute of Physical Chemistry 10 Vorontsovo pole, Moscow, 105064, Russia Institute of Physical Chemistry and Electrochemistry

More information

Multi-reference Density Functional Theory. COLUMBUS Workshop Argonne National Laboratory 15 August 2005

Multi-reference Density Functional Theory. COLUMBUS Workshop Argonne National Laboratory 15 August 2005 Multi-reference Density Functional Theory COLUMBUS Workshop Argonne National Laboratory 15 August 2005 Capt Eric V. Beck Air Force Institute of Technology Department of Engineering Physics 2950 Hobson

More information

Part 1. Answer 7 of the following 8 questions. If you answer more than 7 cross out the one you wish not to be graded. 12 points each.

Part 1. Answer 7 of the following 8 questions. If you answer more than 7 cross out the one you wish not to be graded. 12 points each. Physical Chemistry Final Name Spring 2004 Prof. Shattuck Constants: h=6.626x10-34 J s h =1.054x10-34 J s 1Å=1x10-8cm=1x10-10m NA=6.022x1023 mol-1 R=8.314 J/mol K 1eV= 96.485 kj/mol Part 1. Answer 7 of

More information

Electronic structure theory: Fundamentals to frontiers. 2. Density functional theory

Electronic structure theory: Fundamentals to frontiers. 2. Density functional theory Electronic structure theory: Fundamentals to frontiers. 2. Density functional theory MARTIN HEAD-GORDON, Department of Chemistry, University of California, and Chemical Sciences Division, Lawrence Berkeley

More information

Lec20 Fri 3mar17

Lec20 Fri 3mar17 564-17 Lec20 Fri 3mar17 [PDF]GAUSSIAN 09W TUTORIAL www.molcalx.com.cn/wp-content/uploads/2015/01/gaussian09w_tutorial.pdf by A Tomberg - Cited by 8 - Related articles GAUSSIAN 09W TUTORIAL. AN INTRODUCTION

More information

Computational Chemistry. An Introduction to Molecular Dynamic Simulations

Computational Chemistry. An Introduction to Molecular Dynamic Simulations Computational Chemistry An Introduction to Molecular Dynamic Simulations Computational chemistry simulates chemical structures and reactions numerically, based in full or in part on the fundamental laws

More information

LUMO + 1 LUMO. Tómas Arnar Guðmundsson Report 2 Reikniefnafræði G

LUMO + 1 LUMO. Tómas Arnar Guðmundsson Report 2 Reikniefnafræði G Q1: Display all the MOs for N2 in your report and classify each one of them as bonding, antibonding or non-bonding, and say whether the symmetry of the orbital is σ or π. Sketch a molecular orbital diagram

More information

Density Functional Theory

Density Functional Theory Chemistry 380.37 Fall 2015 Dr. Jean M. Standard October 28, 2015 Density Functional Theory What is a Functional? A functional is a general mathematical quantity that represents a rule to convert a function

More information

Ab initio calculations for potential energy surfaces. D. Talbi GRAAL- Montpellier

Ab initio calculations for potential energy surfaces. D. Talbi GRAAL- Montpellier Ab initio calculations for potential energy surfaces D. Talbi GRAAL- Montpellier A theoretical study of a reaction is a two step process I-Electronic calculations : techniques of quantum chemistry potential

More information

Supporting Information: Predicting the Ionic Product of Water

Supporting Information: Predicting the Ionic Product of Water Supporting Information: Predicting the Ionic Product of Water Eva Perlt 1,+, Michael von Domaros 1,+, Barbara Kirchner 1, Ralf Ludwig 2, and Frank Weinhold 3,* 1 Mulliken Center for Theoretical Chemistry,

More information

Non-covalent force fields computed ab initio

Non-covalent force fields computed ab initio Non-covalent force fields computed ab initio Supermolecule calculations Symmetry-adapted perturbation theory (SAPT) Supermolecule calculations Requirements: E = E AB E A E B. Include electron correlation,

More information

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2 The Delocalized Approach to Bonding: The localized models for bonding we have examined (Lewis and VBT) assume that all electrons are restricted to specific bonds between atoms or in lone pairs. In contrast,

More information

Coupled-cluster and perturbation methods for macromolecules

Coupled-cluster and perturbation methods for macromolecules Coupled-cluster and perturbation methods for macromolecules So Hirata Quantum Theory Project and MacroCenter Departments of Chemistry & Physics, University of Florida Contents Accurate electronic structure

More information

MO Calculation for a Diatomic Molecule. /4 0 ) i=1 j>i (1/r ij )

MO Calculation for a Diatomic Molecule. /4 0 ) i=1 j>i (1/r ij ) MO Calculation for a Diatomic Molecule Introduction The properties of any molecular system can in principle be found by looking at the solutions to the corresponding time independent Schrodinger equation

More information

Lecture 4: methods and terminology, part II

Lecture 4: methods and terminology, part II So theory guys have got it made in rooms free of pollution. Instead of problems with the reflux, they have only solutions... In other words, experimentalists will likely die of cancer From working hard,

More information

Structures and infrared spectra of fluoride hydrogen sulfide clusters from ab initio calculations: F -(H 2 S) n, n = 1 5w

Structures and infrared spectra of fluoride hydrogen sulfide clusters from ab initio calculations: F -(H 2 S) n, n = 1 5w RESEARCH PAPER Structures and infrared spectra of fluoride hydrogen sulfide clusters from ab initio calculations: F -(H 2 S) n, n = 1 5w D. A. Wild* and T. Lenzer PCCP www.rsc.org/pccp MPI fu r biophysikalische

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION Calculations predict a stable molecular crystal of N 8 : Barak Hirshberg a, R. Benny Gerber a,b, and Anna I. Krylov c a Institute of Chemistry and The Fritz Haber Center for Molecular Dynamics, The Hebrew

More information

AN INTRODUCTION TO QUANTUM CHEMISTRY. Mark S. Gordon Iowa State University

AN INTRODUCTION TO QUANTUM CHEMISTRY. Mark S. Gordon Iowa State University AN INTRODUCTION TO QUANTUM CHEMISTRY Mark S. Gordon Iowa State University 1 OUTLINE Theoretical Background in Quantum Chemistry Overview of GAMESS Program Applications 2 QUANTUM CHEMISTRY In principle,

More information

5.04 Principles of Inorganic Chemistry II

5.04 Principles of Inorganic Chemistry II MIT OpenCourseWare http://ocw.mit.edu 5.04 Principles of Inorganic Chemistry II Fall 008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms. 5.04, Principles

More information

Lecture 5: More about one- Final words about the Hartree-Fock theory. First step above it by the Møller-Plesset perturbation theory.

Lecture 5: More about one- Final words about the Hartree-Fock theory. First step above it by the Møller-Plesset perturbation theory. Lecture 5: More about one- determinant wave functions Final words about the Hartree-Fock theory. First step above it by the Møller-Plesset perturbation theory. Items from Lecture 4 Could the Koopmans theorem

More information

On the Uniqueness of Molecular Orbitals and limitations of the MO-model.

On the Uniqueness of Molecular Orbitals and limitations of the MO-model. On the Uniqueness of Molecular Orbitals and limitations of the MO-model. The purpose of these notes is to make clear that molecular orbitals are a particular way to represent many-electron wave functions.

More information

Introduction to computational chemistry Exercise I: Structure and electronic energy of a small molecule. Vesa Hänninen

Introduction to computational chemistry Exercise I: Structure and electronic energy of a small molecule. Vesa Hänninen Introduction to computational chemistry Exercise I: Structure and electronic energy of a small molecule Vesa Hänninen 1 Introduction In this exercise the equilibrium structure and the electronic energy

More information

Assignment 1: Molecular Mechanics (PART 2 25 points)

Assignment 1: Molecular Mechanics (PART 2 25 points) Chemistry 380.37 Fall 2015 Dr. Jean M. Standard September 2, 2015 Assignment 1: Molecular Mechanics (PART 2 25 points) In this assignment, you will perform some additional molecular mechanics calculations

More information

Exercise 1: Structure and dipole moment of a small molecule

Exercise 1: Structure and dipole moment of a small molecule Introduction to computational chemistry Exercise 1: Structure and dipole moment of a small molecule Vesa Hänninen 1 Introduction In this exercise the equilibrium structure and the dipole moment of a small

More information

( R)Ψ el ( r;r) = E el ( R)Ψ el ( r;r)

( R)Ψ el ( r;r) = E el ( R)Ψ el ( r;r) Born Oppenheimer Approximation: Ĥ el ( R)Ψ el ( r;r) = E el ( R)Ψ el ( r;r) For a molecule with N electrons and M nuclei: Ĥ el What is E el (R)? s* potential surface Reaction Barrier Unstable intermediate

More information

in Halogen-Bonded Complexes

in Halogen-Bonded Complexes 9 Resonance Assistance and Cooperativity in Halogen-Bonded Complexes Previously appeared as Covalency in Resonance-Assisted Halogen Bonds Demonstrated with Cooperativity in N-Halo-Guanine Quartets L. P.

More information

New Perspective on structure and bonding in water using XAS and XRS

New Perspective on structure and bonding in water using XAS and XRS New Perspective on structure and bonding in water using XAS and XRS Anders Nilsson Stanford Synchrotron Radiation Laboratory (SSRL) and Stockholm University, Sweden R. Ludwig Angew. Chem. 40, 1808 (2001)

More information

Jack Simons, Henry Eyring Scientist and Professor Chemistry Department University of Utah

Jack Simons, Henry Eyring Scientist and Professor Chemistry Department University of Utah 1. Born-Oppenheimer approx.- energy surfaces 2. Mean-field (Hartree-Fock) theory- orbitals 3. Pros and cons of HF- RHF, UHF 4. Beyond HF- why? 5. First, one usually does HF-how? 6. Basis sets and notations

More information

A perturbational study of some hydrogen-bonded dimers

A perturbational study of some hydrogen-bonded dimers A perturbational study of some hydrogen-bonded dimers Jacqueline Langlet, a) Jacqueline Caillet, b) and Michel Caffarel c) CNRS-Laboratoire de Dynamique des Interactions Moléculaires, Université Paris

More information

The Long and Short of Weak Hydrogen Bonds

The Long and Short of Weak Hydrogen Bonds The Long and Short of Weak Hydrogen Bonds Eluvathingal D. Jemmis Department of Inorganic and Physical Chemistry Indian Institute of Science Bangalore 560012, India jemmis@ipc.iisc.ernet.in http://ipc.iisc.ernet.in/~jemmis

More information

Jack Simons, Henry Eyring Scientist and Professor Chemistry Department University of Utah

Jack Simons, Henry Eyring Scientist and Professor Chemistry Department University of Utah 1. Born-Oppenheimer approx.- energy surfaces 2. Mean-field (Hartree-Fock) theory- orbitals 3. Pros and cons of HF- RHF, UHF 4. Beyond HF- why? 5. First, one usually does HF-how? 6. Basis sets and notations

More information

On the Unusual Properties of Halogen Bonds: A Detailed ab Initio Study of X 2 -(H 2 O) 1-5 clusters (X ) Cl and Br)

On the Unusual Properties of Halogen Bonds: A Detailed ab Initio Study of X 2 -(H 2 O) 1-5 clusters (X ) Cl and Br) 5496 J. Phys. Chem. A 2009, 113, 5496 5505 On the Unusual Properties of Halogen Bonds: A Detailed ab Initio Study of X 2 -(H 2 O) 1-5 clusters (X ) Cl and Br) Margarita I. Bernal-Uruchurtu* and Ramón Hernández-Lamoneda

More information

Advanced Electronic Structure Theory Density functional theory. Dr Fred Manby

Advanced Electronic Structure Theory Density functional theory. Dr Fred Manby Advanced Electronic Structure Theory Density functional theory Dr Fred Manby fred.manby@bris.ac.uk http://www.chm.bris.ac.uk/pt/manby/ 6 Strengths of DFT DFT is one of many theories used by (computational)

More information

Chemistry 4560/5560 Molecular Modeling Fall 2014

Chemistry 4560/5560 Molecular Modeling Fall 2014 Final Exam Name:. User s guide: 1. Read questions carefully and make sure you understand them before answering (if not, ask). 2. Answer only the question that is asked, not a different question. 3. Unless

More information

A One-Slide Summary of Quantum Mechanics

A One-Slide Summary of Quantum Mechanics A One-Slide Summary of Quantum Mechanics Fundamental Postulate: O! = a! What is!?! is an oracle! operator wave function (scalar) observable Where does! come from?! is refined Variational Process H! = E!

More information

Coupled-Cluster Perturbative Triples for Bond Breaking

Coupled-Cluster Perturbative Triples for Bond Breaking Coupled-Cluster Perturbative Triples for Bond Breaking Andrew G. Taube and Rodney J. Bartlett Quantum Theory Project University of Florida INT CC Meeting Seattle July 8, 2008 Why does chemistry need triples?

More information

Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland

Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland 1) Question. Two methods which are widely used for the optimization of molecular geometies are the Steepest descents and Newton-Raphson

More information

R BC. reaction coordinate or reaction progress R. 5) 8pts) (a) Which of the following molecules would give an infrared spectrum? HCl O 2 H 2 O CO 2

R BC. reaction coordinate or reaction progress R. 5) 8pts) (a) Which of the following molecules would give an infrared spectrum? HCl O 2 H 2 O CO 2 Physical Chemistry Spring 2006, Prof. Shattuck Final Name Part Ia. Answer 4 (four) of the first 5 (five) questions. If you answer more than 4, cross out the one you wish not to be graded. 1) 8pts) Of absorption

More information

Lecture B6 Molecular Orbital Theory. Sometimes it's good to be alone.

Lecture B6 Molecular Orbital Theory. Sometimes it's good to be alone. Lecture B6 Molecular Orbital Theory Sometimes it's good to be alone. Covalent Bond Theories 1. VSEPR (valence shell electron pair repulsion model). A set of empirical rules for predicting a molecular geometry

More information

METHODS FOR TREATING SOLVENT EFFECTS AND INTERMOLECULAR FORCES. Mark S. Gordon Iowa State University Ames Laboratory

METHODS FOR TREATING SOLVENT EFFECTS AND INTERMOLECULAR FORCES. Mark S. Gordon Iowa State University Ames Laboratory METHODS FOR TREATING SOLVENT EFFECTS AND INTERMOLECULAR FORCES Mark S. Gordon Iowa State University Ames Laboratory OUTLINE Solvation Methods Explicit vs. implicit methods Explicit Methods TIP3P, TIP4P

More information

Performance of Hartree-Fock and Correlated Methods

Performance of Hartree-Fock and Correlated Methods Chemistry 460 Fall 2017 Dr. Jean M. Standard December 4, 2017 Performance of Hartree-Fock and Correlated Methods Hartree-Fock Methods Hartree-Fock methods generally yield optimized geomtries and molecular

More information

Introduction to Computational Chemistry

Introduction to Computational Chemistry Introduction to Computational Chemistry Vesa Hänninen Laboratory of Physical Chemistry Chemicum 4th floor vesa.hanninen@helsinki.fi September 10, 2013 Lecture 3. Electron correlation methods September

More information

CHAPTER 9 COVALENT BONDING: ORBITALS 323

CHAPTER 9 COVALENT BONDING: ORBITALS 323 APTER 9 OVALET BODIG: ORBITALS 323 2 3 2 2 2 3 3 2 2 3 2 3 O * * 2 o; most of the carbons are not in the same plane since a majority of carbon atoms exhibit a tetrahedral structure (19.5 bond angles).

More information

Non-Born-Oppenheimer Effects Between Electrons and Protons

Non-Born-Oppenheimer Effects Between Electrons and Protons Non-Born-Oppenheimer Effects Between Electrons and Protons Kurt Brorsen Department of Chemistry University of Illinois at Urbana-Champaign PI: Sharon Hammes-Schiffer Funding: NSF, AFOSR Computer time:

More information

Lecture 9. Hartree Fock Method and Koopman s Theorem

Lecture 9. Hartree Fock Method and Koopman s Theorem Lecture 9 Hartree Fock Method and Koopman s Theorem Ψ(N) is approximated as a single slater determinant Φ of N orthogonal One electron spin-orbitals. One electron orbital φ i = φ i (r) χ i (σ) χ i (σ)

More information

Computational Chemistry Using the University of Alaska WebMO Site

Computational Chemistry Using the University of Alaska WebMO Site 2/7/2017 1 Computational Chemistry Using the University of Alaska WebMO Site John Keller Department of Chemistry & Biochemistry University of Alaska Fairbanks Intro and operation of WebMO and MOPAC Basic

More information

5.111 Principles of Chemical Science

5.111 Principles of Chemical Science MIT OpenCourseWare http://ocw.mit.edu 5.111 Principles of Chemical Science Fall 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms. 5.111 Lecture Summary

More information

Supporting Information

Supporting Information Supporting Information Computational Evidence of Inversion of 1 L a and 1 L b -Derived Excited States in Naphthalene Excimer Formation from ab Initio Multireference Theory with Large Active Space: DMRG-CASPT2

More information

Role of Charge Transfer in the Structure and Dynamics of the Hydrated Proton

Role of Charge Transfer in the Structure and Dynamics of the Hydrated Proton Article Role of Charge Transfer in the Structure and Dynamics of the Hydrated Proton Jessica M. J. Swanson, and Jack Simons Subscriber access provided by UNIV OF UTAH J. Phys. Chem. B, 2009, 113 (15),

More information

Beyond the Hartree-Fock Approximation: Configuration Interaction

Beyond the Hartree-Fock Approximation: Configuration Interaction Beyond the Hartree-Fock Approximation: Configuration Interaction The Hartree-Fock (HF) method uses a single determinant (single electronic configuration) description of the electronic wavefunction. For

More information

How Partial Atomic Charges and Bonding. Orbitals Affect the Reactivity of Aluminum

How Partial Atomic Charges and Bonding. Orbitals Affect the Reactivity of Aluminum Supporting Information for: How Partial Atomic Charges and Bonding Orbitals Affect the Reactivity of Aluminum Clusters with Water? Anthony M.S Pembere ξ, Xianhu Liu ξ, Weihua Ding, Zhixun Luo * State Key

More information

QUANTUM CHEMISTRY PROJECT 3: ATOMIC AND MOLECULAR STRUCTURE

QUANTUM CHEMISTRY PROJECT 3: ATOMIC AND MOLECULAR STRUCTURE Chemistry 460 Fall 2017 Dr. Jean M. Standard November 1, 2017 QUANTUM CHEMISTRY PROJECT 3: ATOMIC AND MOLECULAR STRUCTURE OUTLINE In this project, you will carry out quantum mechanical calculations of

More information

Chemistry 334 Part 2: Computational Quantum Chemistry

Chemistry 334 Part 2: Computational Quantum Chemistry Chemistry 334 Part 2: Computational Quantum Chemistry 1. Definition Louis Scudiero, Ben Shepler and Kirk Peterson Washington State University January 2006 Computational chemistry is an area of theoretical

More information

Valence Bond Theory - Description

Valence Bond Theory - Description Bonding and Molecular Structure - PART 2 - Valence Bond Theory and Hybridization 1. Understand and be able to describe the Valence Bond Theory description of covalent bond formation. 2. Understand and

More information

Using Web-Based Computations in Organic Chemistry

Using Web-Based Computations in Organic Chemistry 10/30/2017 1 Using Web-Based Computations in Organic Chemistry John Keller UAF Department of Chemistry & Biochemistry The UAF WebMO site Practical aspects of computational chemistry theory and nomenclature

More information

Water Benzene Interactions: An Effective Fragment Potential and Correlated Quantum Chemistry Study

Water Benzene Interactions: An Effective Fragment Potential and Correlated Quantum Chemistry Study Chemistry Publications Chemistry 2009 Water Benzene Interactions: An Effective Fragment Potential and Correlated Quantum Chemistry Study Lyudmila V. Slipchenko Iowa State University Mark S. Gordon Iowa

More information

Electronic Spectra of Complexes

Electronic Spectra of Complexes Electronic Spectra of Complexes Interpret electronic spectra of coordination compounds Correlate with bonding Orbital filling and electronic transitions Electron-electron repulsion Application of MO theory

More information

Hartree-Fock-Roothan Self-Consistent Field Method

Hartree-Fock-Roothan Self-Consistent Field Method Hartree-Fock-Roothan Self-Consistent Field Method 1. Helium Here is a summary of the derivation of the Hartree-Fock equations presented in class. First consider the ground state of He and start with with

More information

Anion-π and π-π cooperative interactions

Anion-π and π-π cooperative interactions Chapter 5 Anion-π and π-π cooperative interactions 5.1 Introduction The design of selective receptors of anionic species is a very active area of research within supramolecular chemistry due to the potential

More information

Methods for Treating Electron Correlation CHEM 430

Methods for Treating Electron Correlation CHEM 430 Methods for Treating Electron Correlation CHEM 430 Electron Correlation Energy in the Hartree-Fock approximation, each electron sees the average density of all of the other electrons two electrons cannot

More information

Chapter 1: Structure Determines Properties 1.1: Atoms, Electrons, and Orbitals

Chapter 1: Structure Determines Properties 1.1: Atoms, Electrons, and Orbitals hapter 1: Structure Determines Properties 1.1: Atoms, Electrons, and rbitals Molecules are made up of atoms Atoms- protons- (+)-charge, mass = 1.676 X 10-7 kg neutrons- no charge, mass = 1.6750 X 10-7

More information

2~:J~ -ryej- r- 2 Jr. A - f3. sr(djk nv~tor rn~ +~ rvjs (::-CJ) ::;-1-.'--~ -. rhd. ('-.Ji.L.~ )- r'-d)c, -r/~ JJr - 2~d ~2-Jr fn'6.

2~:J~ -ryej- r- 2 Jr. A - f3. sr(djk nv~tor rn~ +~ rvjs (::-CJ) ::;-1-.'--~ -. rhd. ('-.Ji.L.~ )- r'-d)c, -r/~ JJr - 2~d ~2-Jr fn'6. .~, ~ I, sr(djk nv~tor rn~ +~ rvjs (::-CJ) ::;-1-.'--~ -. rhd. ('-.Ji.L.~ )- r'-d)c, -r/~ JJr - 2~d ~2-Jr fn'6.)1e'" 21t-ol Je C'...-------- lj-vi, J? Jr Jr \Ji 2~:J~ -ryej- r- 2 Jr A - f3 c _,~,= ~,.,w._..._.

More information

5.111 Lecture Summary #7 Wednesday, September 17, 2014

5.111 Lecture Summary #7 Wednesday, September 17, 2014 5.111 Lecture Summary #7 Wednesday, September 17, 2014 Readings for today: Section 1.12 Orbital Energies (of many-electron atoms), Section 1.13 The Building-Up Principle. (Same sections in 5 th and 4 th

More information

Exercise 2.4 Molecular Orbital Energy Level Diagrams: Homonuclear Diatomics

Exercise 2.4 Molecular Orbital Energy Level Diagrams: Homonuclear Diatomics Exercise 2.4 Molecular rbital Energy Level Diagrams: Homonuclear Diatomics This exercise assumes that you are familiar with the count and sort algorithm described in Exercise 2.3. The table of atomic orbital

More information

Chem 4502 Introduction to Quantum Mechanics and Spectroscopy 3 Credits Fall Semester 2014 Laura Gagliardi. Lecture 28, December 08, 2014

Chem 4502 Introduction to Quantum Mechanics and Spectroscopy 3 Credits Fall Semester 2014 Laura Gagliardi. Lecture 28, December 08, 2014 Chem 4502 Introduction to Quantum Mechanics and Spectroscopy 3 Credits Fall Semester 2014 Laura Gagliardi Lecture 28, December 08, 2014 Solved Homework Water, H 2 O, involves 2 hydrogen atoms and an oxygen

More information

2 Bonding and structure Answers to Exam practice questions

2 Bonding and structure Answers to Exam practice questions Pages 77 80 Exam practice questions 1 a) Bonding between atoms in a metal is the result of electrostatic attractions between positive metal ions in a lattice and delocalised electrons in the outer shell

More information

Electron Correlation

Electron Correlation Electron Correlation Levels of QM Theory HΨ=EΨ Born-Oppenheimer approximation Nuclear equation: H n Ψ n =E n Ψ n Electronic equation: H e Ψ e =E e Ψ e Single determinant SCF Semi-empirical methods Correlation

More information

CHAPTER TEN MOLECULAR GEOMETRY MOLECULAR GEOMETRY V S E P R CHEMICAL BONDING II: MOLECULAR GEOMETRY AND HYBRIDIZATION OF ATOMIC ORBITALS

CHAPTER TEN MOLECULAR GEOMETRY MOLECULAR GEOMETRY V S E P R CHEMICAL BONDING II: MOLECULAR GEOMETRY AND HYBRIDIZATION OF ATOMIC ORBITALS CHAPTER TEN CHEMICAL BONDING II: AND HYBRIDIZATION O ATOMIC ORBITALS V S E P R VSEPR Theory In VSEPR theory, multiple bonds behave like a single electron pair Valence shell electron pair repulsion (VSEPR)

More information

Computational Chemistry I

Computational Chemistry I Computational Chemistry I Text book Cramer: Essentials of Quantum Chemistry, Wiley (2 ed.) Chapter 3. Post Hartree-Fock methods (Cramer: chapter 7) There are many ways to improve the HF method. Most of

More information

Electron-Proton Correlation, Theory, and Tunneling Splittings. Sharon Hammes-Schiffer Penn State University

Electron-Proton Correlation, Theory, and Tunneling Splittings. Sharon Hammes-Schiffer Penn State University Nuclear-Electronic Orbital Approach: Electron-Proton Correlation, Multicomponent Density Functional Theory, and Tunneling Splittings Sharon Hammes-Schiffer Penn State University Nuclear Quantum Effects

More information

CHE3935. Lecture 4 Quantum Mechanical Simulation Methods Continued

CHE3935. Lecture 4 Quantum Mechanical Simulation Methods Continued CHE3935 Lecture 4 Quantum Mechanical Simulation Methods Continued 1 OUTLINE Review Introduction to CPMD MD and ensembles The functionals of density functional theory Return to ab initio methods Binding

More information

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2 The Delocalized Approach to Bonding: The localized models for bonding we have examined (Lewis and VBT) assume that all electrons are restricted to specific bonds between atoms or in lone pairs. In contrast,

More information

Molecular-Orbital Theory

Molecular-Orbital Theory Prof. Dr. I. Nasser atomic and molecular physics -551 (T-11) April 18, 01 Molecular-Orbital Theory You have to explain the following statements: 1- Helium is monatomic gas. - Oxygen molecule has a permanent

More information

Electronic quantum effect on hydrogen bond geometry in. water dimer

Electronic quantum effect on hydrogen bond geometry in. water dimer Electronic quantum effect on hydrogen bond geometry in water dimer Danhui Li 1,2, Zhiyuan Zhang 1,2 Wanrun Jiang 1,2 Depeng Zhang 1,2 Yu Zhu 1,2 and Zhigang Wang 1,2* 1 Institute of Atomic and Molecular

More information

Lone Pairs: An Electrostatic Viewpoint

Lone Pairs: An Electrostatic Viewpoint S1 Supporting Information Lone Pairs: An Electrostatic Viewpoint Anmol Kumar, Shridhar R. Gadre, * Neetha Mohan and Cherumuttathu H. Suresh * Department of Chemistry, Indian Institute of Technology Kanpur,

More information

Investigating Popular Water Models

Investigating Popular Water Models Investigating Popular Water odels Albert DeFusco, Ken Jordan Center for olecular and aterials Simulations What are we modeling? OOOOOLLLLLDDDDDEDEEEENENNNNNN OOLL D E OOOOOLLLLLDDDDDEDEEEENENNNNNN OOLL

More information

Reikniefnafræði - Verkefni 1 Haustmisseri 2013 Kennari - Hannes Jónsson

Reikniefnafræði - Verkefni 1 Haustmisseri 2013 Kennari - Hannes Jónsson Háskóli Íslands, raunvísindasvið Reikniefnafræði - Verkefni 1 Haustmisseri 2013 Kennari - Hannes Jónsson Guðjón Henning 11. september 2013 A. Molecular orbitals and electron density of H 2 Q1: Present

More information

High-level Quantum Chemistry Methods and Benchmark Datasets for Molecules

High-level Quantum Chemistry Methods and Benchmark Datasets for Molecules High-level Quantum Chemistry Methods and Benchmark Datasets for Molecules Markus Schneider Fritz Haber Institute of the MPS, Berlin, Germany École Polytechnique Fédérale de Lausanne, Switzerland دانشگاه

More information

D. Schweke and Y. Haas* Bernhard Dick

D. Schweke and Y. Haas* Bernhard Dick 3830 J. Phys. Chem. A 2005, 109, 3830-3842 Photophysics of Phenylpyrrole Derivatives and Their Acetonitrile Clusters in the Gas Phase and in Argon Matrixes: Simulations of Structure and Reactivity D. Schweke

More information

5.61 Physical Chemistry Exam III 11/29/12. MASSACHUSETTS INSTITUTE OF TECHNOLOGY Department of Chemistry Chemistry Physical Chemistry.

5.61 Physical Chemistry Exam III 11/29/12. MASSACHUSETTS INSTITUTE OF TECHNOLOGY Department of Chemistry Chemistry Physical Chemistry. MASSACHUSETTS INSTITUTE OF TECHNOLOGY Department of Chemistry Chemistry - 5.61 Physical Chemistry Exam III (1) PRINT your name on the cover page. (2) It is suggested that you READ THE ENTIRE EXAM before

More information

Chemical Bonding & Structure

Chemical Bonding & Structure Chemical Bonding & Structure Further aspects of covalent bonding and structure Hybridization Ms. Thompson - HL Chemistry Wooster High School Topic 14.2 Hybridization A hybrid orbital results from the mixing

More information

Chimica Farmaceutica

Chimica Farmaceutica Chimica Farmaceutica Drug Targets Why should chemicals, some of which have remarkably simple structures, have such an important effect «in such a complicated and large structure as a human being? The answer

More information

The Role of Polarization in a Halogen Bond

The Role of Polarization in a Halogen Bond 1 The Role of Polarization in a Halogen Bond Timothy Clark, a,b, * Jane S. Murray c,d and Peter Politzer c,d a Computer-Chemie-Centrum, Department Chemie und Pharmazie, Friedrich- Alexander-Universität

More information

Bridging Scales Through Wavefunction Analysis

Bridging Scales Through Wavefunction Analysis Bridging Scales Through Wavefunction Analysis Felix Plasser Institute for Theoretical Chemistry, University of Vienna Excited States Bridging Scales Marseille, November 7 10, 2016 F. Plasser Wavefunction

More information

The chemical Hamiltonian approach (CHA) [1] Convergence Acceleration Techniques for Non-Hermitian SCF Problems PEDRO SALVADOR.

The chemical Hamiltonian approach (CHA) [1] Convergence Acceleration Techniques for Non-Hermitian SCF Problems PEDRO SALVADOR. Convergence Acceleration Techniques for Non-Hermitian SCF Problems PEDRO SALVADOR Institute of Computational Chemistry, University of Girona, Campus Montilivi s/n, 17071 Girona, Spain Received 10 October

More information

Organometallic Rections 1: Reactions at the Metal

Organometallic Rections 1: Reactions at the Metal E Organometallic Rections 1: Reactions at the Metal Three major classes of reactions: 1 Ligand Substitution associative (cf. S N 2) dissociative (cf. S N 1) interchange (not dealt with in this course)

More information

Diagrammatic Representation of Electronic Correlations in Photoionization Process: Application to Scandium

Diagrammatic Representation of Electronic Correlations in Photoionization Process: Application to Scandium Commun. Theor. Phys. 56 (2011) 312 316 Vol. 56, No. 2, August 15, 2011 Diagrammatic Representation of Electronic Correlations in Photoionization Process: Application to Scandium LIU Meng-Meng ( ) and MA

More information

Chemistry 210 Organic Chemistry I Winter Semester 2002 Dr. Rainer Glaser

Chemistry 210 Organic Chemistry I Winter Semester 2002 Dr. Rainer Glaser Chemistry 210 rganic Chemistry I Winter Semester 2002 Dr. Rainer Glaser Examination #2 Molecular rbitals, Intra- and Intermolecular Bonding, Conformational Theory of Alkanes & Cycloalkanes. Friday, February

More information

1s atomic orbital 2s atomic orbital 2s atomic orbital (with node) 2px orbital 2py orbital 2pz orbital

1s atomic orbital 2s atomic orbital 2s atomic orbital (with node) 2px orbital 2py orbital 2pz orbital Atomic Orbitals 1s atomic orbital 2s atomic orbital 2s atomic orbital (with node) 2px orbital 2py orbital 2pz orbital Valence Bond Theory and ybridized Atomic Orbitals Bonding in 2 1s 1s Atomic Orbital

More information

Supporting Information for

Supporting Information for Supporting Information for Interplay of Halogen and - Charge-Transfer Bondings in Intermolecular Associates of Bromo- or Iododinitrobenzene with Tetramethyl-p-phenylenediamine. Sergiy V. Rosokha, * Eric

More information

There are two types of bonding that exist between particles interparticle and intraparticle bonding.

There are two types of bonding that exist between particles interparticle and intraparticle bonding. There are two types of bonding that exist between particles interparticle and intraparticle bonding. Intraparticle bonding describes the forces that exist within a particle such as a molecule or ionic

More information

5.4. Electronic structure of water

5.4. Electronic structure of water 5.4. Electronic structure of water Water belongs to C 2v point group, we have discussed the corresponding character table. Here it is again: C 2v E C 2 σ v (yz) σ v (xz) A 1 1 1 1 1 A 2 1 1-1 -1 B 1 1-1

More information

AN AB INITIO STUDY OF INTERMOLECULAR INTERACTIONS OF GLYCINE, ALANINE AND VALINE DIPEPTIDE-FORMALDEHYDE DIMERS

AN AB INITIO STUDY OF INTERMOLECULAR INTERACTIONS OF GLYCINE, ALANINE AND VALINE DIPEPTIDE-FORMALDEHYDE DIMERS Journal of Undergraduate Chemistry Research, 2004, 1, 15 AN AB INITIO STUDY OF INTERMOLECULAR INTERACTIONS OF GLYCINE, ALANINE AND VALINE DIPEPTIDE-FORMALDEHYDE DIMERS J.R. Foley* and R.D. Parra Chemistry

More information

Characteristics of the interaction in azulene (H 2 X) n=1,2 (X=O,S) clusters.

Characteristics of the interaction in azulene (H 2 X) n=1,2 (X=O,S) clusters. Characteristics of the interaction in azulene (H 2 X) n=1,2 (X=O,S) clusters. Enrique M. Cabaleiro-Lago (a), Ángeles Peña-Gallego (b), Jesús Rodríguez-Otero (b), M. Merced Montero-Campillo (b) (a) Departamento

More information