Chapter 3. Diagnostics and Remedial Measures
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1 Chapter 3. Diagnostics and Remedial Measures So far, we took data (X i, Y i ) and we assumed Y i = β 0 + β 1 X i + ǫ i i = 1, 2,..., n, where ǫ i iid N(0, σ 2 ), β 0, β 1 and σ 2 are unknown parameters, X i s are fixed constants. Question: What are the possible mistakes or violations of these assumptions?
2 1. Regression function is not linear (E(Y ) β 0 + β 1 X) 2. Error terms do not have a constant variance 3. Error terms are not independent We will use Residual Plots to diagnose the problems Residuals: e i = Y i Ŷi = Y i (b 0 + b 1 X i ) Sample Mean: ē = 1 n Sample Var: 1 n 1 i (e i ē) 2 = 1 n 1 i e i = 0 i e2 i MSE We will sometimes use standardized (semistudentized) residuals
3 Nonlinearity of Regression Function (1.) Residual plot against the predictor variable, X. Or use a residual plot against the fitted values, Ŷ. Look for systematic tendencies! Example: e i < 0 e i > 0 e i < 0 plant growth residuals 0 e i < 0 e i > 0 e i < 0 water/week water/week
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6 Nonconstancy of Error Variance (2.) We diagnose nonconstant error variance by observing a residual plot against X and looking for structure. Example: entertainment 0 residuals salary salary
7 Modified Levene Test 1. Divide residuals into two groups. For this example, low and high salary groups, because the variance is suspected to depend on salary. 2. Calculate d i1 = e i1 ẽ 1 and d i2 = e i2 ẽ 2, where e ij is the i th residual in group j and ẽ j is the median of residuals in group j. 3. Conduct two-sample t-test with d ij.
8 Nonindependence of Error Terms (3.) We diagnose nonindependence of errors over time or in some sequence by observing a residual plot against time (or the sequence) and looking for a trend (see textbook, p. 101, for typical plots). Example: #parts residuals 0 #hours #hours
9 But, if the data is like day 1: (X 1, Y 1 ) day 2: (X 2, Y 2 ). day n: (X n, Y n ) then we can see the effect of learning. residuals 0 residuals 0 #hours day
10 Model fits all but a few observations (4.) Example: LS Estimates with 2 outlying points (solid) and without them (dashed). Rule of Thumb: Outliers are detected by observing a plot of e i vs. X i. y e i MSE x x
11 Errors not normally dist d (5.) We assumed ǫ 1,..., ǫ n iid N(0, σ 2 ) but we can t observe these error terms! We will be convinced that this assumption is reasonable, if e 1,..., e n appear to be iid N(0, MSE). Fact: If e 1,..., e n iid N(0, MSE), then one can show that the expected value of the ith smallest is [ ( )] i 3/8 MSE z, i = 1, 2,..., n n + 1/4 Then we have pairs residual expected [ ( residual e min MSE z )] n+0.25 [ ( e 2nd smallest MSE z )] n [ ( MSE z n )] n+0.25 e max
12 Notice: If Y 1,..., Y 4 iid N(0, σ 2 ), then E(Y 1 ) = = E(Y 4 ) = 0, and E(Ȳ ) = 0, but E(Y min ) = σ [ z ( )] = σz(0.147) = 1.05σ, E(Y 2nd ) = σ [ z ( )] = σz(0.382) = 0.30σ, E(Y 3rd ) = σ [ z ( )] = σz(0.618) = +0.30σ, E(Y max ) = σ [ z ( )] = σz(0.853) = +1.05σ,
13 Points on a straight line: Errors are normal (left) Points on a curve: Errors are not normal (right) semistud. residuals expected residuals semistud. residuals expected residuals
14 Omission of important predictors (6.) Example: X i = #years of education, Y i = salary salary semistud. residuals 0 #years of education #years in job Means, that a better model would be (Multiple Regression Model)
15 Lack of Fit Test Suppose we want to test whether the relationship between X and Y is linear vs the possibility that it is NOT linear. Test for: H 0 : E(Y ) = β 0 + β 1 X versus H a : Not H 0 Here, H 0 includes the cases when either or both β 0 and β 1 are zero. We can t use this test unless there are multiple Y s observed at at least 1 value of X.
16 Y 2j Y Y 2 Y^ 2 E^(Y) = b 0 + b 1 X X 1 X 2 X 3 X 4 X Can we use this test when X=day and Y=stock price? Can we use this test when X=weight and Y=height and those are measured with a super accurate measure?
17 New Notation: Y values are observed at c different levels of X, say X 1, X 2,..., X c. n j such Y values, say Y 1j, Y 2j,..., Y nj j, are observed at level X j, j = 1, 2,..., c, n j 1. Let Ȳj = 1 n j i Y ij be the average of the Y s at X j and Ŷj = b 0 + b 1 X j the fitted mean under the SLR. The data now look like at X 1 : (X 1, Y 11 ), (X 1, Y 21 ),..., (X 1, Y n1 1) at X 2 : (X 2, Y 12 ), (X 2, Y 22 ),..., (X 2, Y n2 2). at X c : (X c, Y 1c ), (X c, Y 2c ),..., (X c, Y nc c) Ȳ1 Ȳ2 Ȳc
18 The less restricting model puts no structure on the means at each level of X (Full model). Full model: Y ij = µ j + ǫ ij, where ˆµ j = Ȳj Reduced model: Y ij = β 0 + β 1 X j + ǫ ij F-test!!!!
19 Note that Y ij Ŷj = (Y ij Ȳj) + (Ȳj Ŷj) Let s partition the SSE into 2 pieces SSE = SSPE + SSLF where n c j (Y ij Ŷj) 2 = j=1 i=1 n c j n c j (Y ij Ȳj) 2 + (Ȳj Ŷj) 2 j=1 i=1 j=1 i=1 If SSPE SSE, it says that the means ( ) are close to the fitted values ( ). That is, even if we fit a less restrictive model, we can t reduce the amount of unexplained variability. If SSLF SSE, the means ( ) are far away from the fitted values ( ) and the (linear) restriction seems unreasonable. Thus,
20 Formal Test for: H 0 : E(Y ) = β 0 + β 1 X H A : E(Y ) β 0 + β 1 X Let MSLF = SSLF c 2 and MSPE = SSPE n c F = = = SSE(R) SSE(F) df(r) df(f) SSE(F) df(f) SSE SSP E (n 2) (n c) SSPE SSLF c 2 SSPE n c n c F c 2,n c F SSE SSPE The model is bad. Test Statistic: Rejection Rule:
21 This fits nicely into our ANOVA Table: Source of variation SS df M S Regression SSR 1 M SR Error SSE n 2 MSE Lack of Fit SSLF c 2 MSLF Pure Error SSPE n c MSPE Total SSTO n 1 Example: Suppose that the house prices follow a SLR in #bedrooms. The estimated regression function is Ê(price/1,000) = (#bedrooms) Variation SS df M S Regression 62, ,578 Error 117, ,286 Lack of Fit Pure Error Total
22 Because F = MSLF/MSPE = 1, 432/1, 281 = 1.12 < F(0.95; 3, 88) = 2.71 we do not reject H 0. price bedrooms
23 Transformations Motivation: Consider the function y = x 2 x y y y = x 2 x 2 y y x x 2 If you have (x 1, y 1 ), (x 2, y 2 ),..., (x n, y n ) and you know y = f(x), then (f(x 1 ), y 1 ), (f(x 2 ), y 2 ),..., (f(x n ), y n ) will be on a straight line. What follows are two situations in which transformations may help:
24 Situation 1: nonlinear regression function with constant error variances (1.) Note that E(Y ) doesn t appear to be a linear function of X, that is, the points do not seem to lie on a line. The spread of the Y s at each level of X appears to be constant, however. Y X vs. Y X Typical remedy Transform X We consider Do not transform Y because this will disturb the spread of the Y s at each level X. Y sqrt(x) vs. Y sqrt(x)
25 Situation 2: nonlinear regression function with nonconstant error variances (1. with 2.) X vs. Y Note that E(Y ) isn t a linear function of X. The variance of the Y s at each level of X is increasing with X. Y X X vs. sqrt(y) Typical remedy Transform Y (or maybe X and Y ) We consider And hope that both problems are fixed. sqrt(y) X
26 Prototypes for Transforming Y Y Y Y X Try Y, log 10 Y, or 1/Y X X Prototypes for Transforming X Y Y Y X Use X or log 10 X (left); X 2 or exp(x) (middle); 1/X or exp( X) (right). X X
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3. Diagnostics and Remedial Measures So far, we took data (X i, Y i ) and we assumed where ɛ i iid N(0, σ 2 ), Y i = β 0 + β 1 X i + ɛ i i = 1, 2,..., n, β 0, β 1 and σ 2 are unknown parameters, X i s
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