A biphasic hyperelastic model for the analysis of fluid and mass transport in brain. tissue. José Jaime García

Size: px
Start display at page:

Download "A biphasic hyperelastic model for the analysis of fluid and mass transport in brain. tissue. José Jaime García"

Transcription

1 A biphasic hyperelastic model for the analysis of fluid and mass transport in brain tissue José Jaime García Escuela de Ingeniería Civil y Geomática Universidad del Valle, Cali, Colombia Joshua H. Smith Department of Mechanical Engineering Lafayette College Easton, PA 18042, USA Corresponding author institution and address: José Jaime García Universidad del Valle Calle 13 Carrera 100 Edificio 350 Cali Colombia South America Tel: (572) Fax: (572) josejgar@univalle.edu.co 1

2 Abstract A biphasic hyperelastic finite element model is proposed for the description of the mechanical behavior of brain tissue. The model takes into account finite deformations through an Ogden-type hyperelastic compressible function and a hydraulic conductivity dependent on deformation. The biphasic equations, implemented here for spherical symmetry using an updated Lagrangian algorithm, yielded radial coordinates and fluid velocities that were used with the convective-diffusive equation in order to predict mass transport in the brain. Results of the model were equal to those of a closed-form solution under infinitesimal deformations, however, for a wide range of material parameters, the model predicted important increments in the infusion sphere, reductions of the fluid velocities, and changes in the species content distribution. In addition, high localized deformation and stresses were obtained at the infusion sphere. Differences with the infinitesimal solution may be mainly attributed to geometrical nonlinearities related to the increment of the infusion sphere and not to material nonlinearities. Keywords Convection enhanced delivery; infusion; hydrated tissues. 2

3 Nomenclature Variable or constant Definition C C a D E e J M p r v i v f v s W α k Tissue concentration of a chemical species Aqueous concentration of a chemical species Effective diffusion coefficient Young s modulus Volume dilatation Determinant of the deformation gradient tensor Nonlinear parameter for hydraulic conductivity Pore pressure (interstitial fluid pressure) Radial coordinate Interstitial fluid velocity Bulk fluid velocity Velocity of the solid phase Energy function Parameter of the energy function φ f Volume fraction of the fluid phase Volume fraction of the fluid phase at zero strain κ κ 0 λ r Hydraulic conductivity Hydraulic conductivity at zero strain Radial stretch ratio λ θ Circumferential stretch ratio 3

4 µ k Parameter of the energy function µ ' Parameter of the energy function Radial effective stress Circumferential effective stress ν Poisson s ratio Introduction Various biological tissues such as brain and articular cartilage are composed of a solid phase and a fluid, where the fluid plays an important role in the physiological activities and the mechanical response of the tissue. 23 Mathematical models that have been proposed to simulate the mechanical response of biological hydrated tissues are important tools to understand the etiology of diseases, to develop biomedical devices, or to test protocols to treat disorders. In particular, efforts to develop models for brain tissue have been motivated by the need to simulate hydrocephalus, head trauma, neurosurgical procedures and protocols to deliver therapeutic drugs into the brain. Early mathematical models considered the brain as a single-phase, linear, viscoelastic material, 6,19 and more recent models have considered single-phase, nonlinear, viscoelastic formulations. 5,11,18,20,21,26,27 Poroelastic or biphasic models have been used to study hydrocephalus 12,30,32,36 and the fluid transport and tissue deformation that occurs during positive pressure infusion, also called convection enhanced delivery. 2,3,31 Each of the biphasic studies, with the exception of the recent study by Dutta-Roy et al., 12 is limited by the assumption of linear elasticity of the solid phase. Initial attempts at modeling the mass transport that occurs during convection enhanced delivery were 4

5 conducted under the even more limiting assumption that the tissue is rigid during the infusion, 22,28,29 although this was relaxed by Netti et al. 24 and Chen and Sarntinoranont, 8 who also assume linear elasticity of the solid phase. Nonlinear stress-strain curves under finite deformations have been documented for brain tissue under tension 13,21 and compression. 20 Whether or not this nonlinear behavior is relevant under all clinical conditions is still focus of discussion, with, for example, Taylor and Miller 33 arguing that a linear constitutive model is sufficient for modeling hydrocephalus but Clarke and Meyer 10 recently stating that a nonlinear formulation is needed. The nonlinear variation of hydraulic conductivity with strain has also been taken into account and this effect has been deemed to play an important role in both the mechanics of the tissue and the associated fluid transport. 32,36 One of the primary goals of modeling convection enhanced delivery is the prediction of the distribution of the infused therapeutic agent. Previous models of infusion into the brain and spinal cord have generally either considered (1) anatomically realistic geometry but assumed no tissue deformation during the infusion, 16,17,28,29 or (2) the concomitant tissue deformation and drug transport but for a simplified, spherical geometry. 8,22,24 To the best of our knowledge, no model has been proposed to consider simultaneously nonlinear stress-strain curves under finite deformation, nonlinear variation of hydraulic conductivity, and convective-diffusive transport of the infused agent. We present a spherically symmetric model of the concomitant fluid and mass transport that occurs during the large deformation of brain tissue as a result of convection enhanced delivery. 5

6 Whereas commercial finite element solvers have recently been used to study infusion 8 and hydrocephalus, 12 no package supports modeling the nonlinear behavior of brain tissue coupled with the transport of the infused agent. The spherical model we present, implemented in a custom-written code, is used to study the physics that occurs during a constant pressure infusion and to determine the importance of using a nonlinear material model for brain tissue and of including a deformation-dependent hydraulic conductivity in such simulations. Knowing the significance of these effects is important for the development of more advanced, three-dimensional computational models that may ultimately aid in devising clinical infusion protocols for the treatment of diseases of brain tissue. Description of the mathematical model Biphasic model Fluid flow and strain of a hydrated biological tissue considering spherical symmetry and finite deformations can be described in terms of the mixed solid velocity pressure formulation 1 by the following equations: (1). (2) The variables and are the effective stresses in radial and tangential direction, respectively, v s is the velocity of the solid phase, p is the pore pressure (interstitial fluid pressure) and the coefficient κ is the hydraulic conductivity. Considering the spherical symmetry all functions only change with the radial coordinate r, which represents the 6

7 current position of a material element. Eq. (1) is a statement of force equilibrium and Eq. (2) is a statement of fluid mass continuity that neglects any transvascular fluid exchange. The solid phase was represented by a hyperelastic isotropic energy function W as W N = k= 1 µ k α α µ ' k k ( λr + 2λθ 3 α k ln( J )) + ( J 1) α 2 k 2 (3) where α k, and λ r and λ θ are, respectively, the radial and circumferential stretch ratios, µ k, µ ' are material parameters and J is the determinant of the deformation gradient tensor. 25 The material parameters can be adjusted to yield the Young s modulus E and Poisson s ratio ν at zero strain as follows N E = ( 1+ ν ) α µ (4) k = 1 k k ν = 2µ ' + µ ' N k = 1 α k µ k. (5) The incompressible form of this energy function allows reproducing the nonlinear behavior of brain tissue under finite deformations, as shown by Miller and Chinzei 21 and Franceschini et al. 13 The variation used here allows using Poisson s ratios different than 0.5, which is consistent with the experimental behavior of brain tissue. 34 Note that material parameters α k can be adjusted to describe the shape of the stress-strain curve. To be consistent with other analyses of brain tissue, 8,32,36 the variation of hydraulic conductivity with strain was assumed to depend on tissue dilatation as, (6) 7

8 where κ 0 is the hydraulic conductivity at zero strain, M is a non-dimensional parameter that controls the variation of hydraulic conductivity, and e is the volume dilatation, that can be related to the stretch ratios as. (7) Eqs. (1) and (2) were solved using well known procedures of finite elements and an updated Lagrangian scheme, 4 where the validation of the code was accomplished comparing numerical results with closed-form solutions reported in the literature. 14 The Galerkin method was used with linear interpolation for both the shape functions and the weighting functions. After solution of Eqs. (1) and (2), the fraction of the fluid phase φ f was calculated using φ f =1 (1 φ f0 ) /J, (8) where φ f0 is the initial fluid fraction. Darcy s law was then used to calculate the radial bulk velocity v f and interstitial fluid velocity v i as v f p = viφ f = κ + φ f vs, (9) r where v s is the velocity of the solid phase. Mass transport model The convective-diffusive mass transport equation considering a coordinate system fixed in space is described by C+ C v i ( D C) = 0, (10) 8

9 where C is the material derivative of the concentration C of the chemical species per unit volume of tissue (in contrast to interstitial concentration, which is per unit volume of the interstitial fluid within the tissue), v i is the interstitial fluid velocity vector, and D is the effective diffusion coefficient as measured in the tissue. 8,22,28.29,35 In this statement of mass conservation of the species, we assume that transport is limited to the interstitial space, and furthermore, that no vascular uptake, cellular absorption, or metabolism occur. Lastly, since convective effects dominate diffusive effects, for simplicity we assume that the effective diffusion coefficient D does not change as the tissue deforms. Both the transient fluid velocity and deformation of the tissue from the biphasic analysis were considered in the transport model. Thus, at each time step the finite element mesh was not fixed in space, as assumed in Eq. (10), but updated according to the deformation of the tissue. To take this effect into account in the finite element solution, the material derivative of C in Eq. (10) was replaced in terms of the convected velocity (the difference between the velocity of the fluid and the velocity of the solid phase) as 4 C C = + ( vi v s ) C. t (11) Therefore, in this formulation the transport equation becomes C + ( v v s ) C + C vi ( D C) = 0 t i, (12) which is represented by the following equation for a spherically symmetric geometry: C t + (v i v s ) C r + 1 r 2 [ r r2 v i ]C 1 r 2 r r2 D C r = 0. (13) Eq. (13) was solved in space with the Galerkin method using linear interpolation functions and the time derivative of C was approximated with the backward difference. 9

10 Usually concentration distributions are presented normalized against the concentration in the interstitial space, that is C (φ f C a ) where C a is the aqueous concentration. Normalized in this way, the concentration represents the amount of the therapeutic agent per unit volume of the interstitial fluid, and hence will be referred to as the normalized interstitial concentration. While not often shown in previous literature on infusion, the concentration distributions can also be normalized against the aqueous concentration, that is C C a. Normalized in this way, the concentration represents the amount of the therapeutic agent per unit volume of brain tissue, and hence will be referred to as the normalized bulk concentration. While the former method is a more true liquid concentration, this latter definition is more comparable to quantifying the distribution of radiolabeled agents in vivo using MR or SPECT since these imaging techniques measure intensity per voxel. Geometry, boundary conditions, and mesh Consistent with the geometry used by Chen and Sarntinoranont, 8 an infusion cavity of 0.18 mm initial radius was considered in the analyses. The domain was represented using 120 elements with a length of 0.02 mm for the first element and a geometric increment of Each element represents a spherical domain comprised between the two nodes. Other analyses undertaken with a mesh composed of 240 elements showed results within the 2% of those obtained with the current mesh, so results obtain using the mesh with 120 elements were considered to be mesh independent. In the coupled biphasic and mass transport analyses, a small region of normalized interstitial concentration 2% greater than 1 was obtained for the more compliant 10

11 material. Since normalized values in excess to 1 are not physically admissible, analyses with meshes of 240 and 360 elements were performed and showed convergence of those values to 1. Hence, concentration curves are shown for the mesh of 360 elements. The 120 and 360 element meshes resulted in an outer radius of the spherical domain greater than 20 mm, large enough to be consistent with the biphasic boundary conditions at infinity, which were zero traction and zero pore pressure. Pore pressure was prescribed at the inner sphere and a traction equal to the pore pressure, which implies a radial effective stress equal to zero at the inner boundary, in agreement with other analyses of infusion. 8 A time step of 5 s was used. At the inner boundary the interstitial concentration is known. Therefore, as a boundary condition for the mass transport equation, the concentration C per unit volume of the tissue was made equal to the aqueous concentration C a multiplied by the fluid fraction calculated from the biphasic analysis, that is, φ f (r i,t)c a where r i is the current radius of the infusion sphere. Material properties A value of 0.35 was used for the Poisson s ratio, in agreement with the analyses by Chen and Sarntinoranont. 8 Based on this Poisson s ratio, a baseline Young s modulus of 421 Pa was obtained from the equilibrium shear modulus (156 Pa) that can be calculated from results reported by Miller and Chinzei

12 Two sets of nonlinear elastic parameters were used in this study using one term in the energy function, Eq. (3). In the first set, α1 = 4. 7 from the experimental study of Miller and Chinzei. 21 The other energy function parameters were calculated using Eqs. (4) and (5) as µ 1 = Pa and µ '= Pa. In the second nonlinear set, α 1 = 1, which allowed for reproducing a more linear behavior of the stress-strain curve (Figure 2). For this set, the other energy function parameters were calculated as µ = Pa and µ '= Pa. For the initial hydraulic conductivity κ 0, a range between 0.1 mm 4 N -1 s -1 used by Chen and Sarntinoranont 8 and 4 mm 4 N -1 s -1 measured by Cheng and Bilston 9 was used in the analyses. To our knowledge, the nondimensional parameter M governing the variation of hydraulic conductivity with deformation has not been measured in brain tissue, but has been assumed to be in the range of 0 to 5 in previous studies of brain tissue. 8,32,36 Because these studies were limited to infinitesimal deformations, and therefore smaller values of the dilatation, we consider values of M in the range of 0 to 2. To be consistent with Chen and Sarntinoranont 8 a diffusion coefficient D equal to mm 2 s -1. A summary of material parameters used in this study is presented in Table 1. Results of the finite element implementation were compared with analytic solutions developed by Basser 3 for the pore pressure and the fluid velocity and developed by Chen and Sarntinoranont 8 for the radial displacement. For this validation, we used a Young s modulus of 4210 Pa, tenfold the value calculated using the results of Miller and Chinzei, 21 to guarantee infinitesimal deformations and a value for M of 0, so that the hydraulic conductivity was constant with deformation. 12

13 Results At steady state, good correlations were observed between the closed form linear solution and the nonlinear finite element curves at an infusion pressure of 100 Pa (Figure 3), with differences of maximum values of fluid velocity and radial displacement of 5.4% and 0.7%, respectively, using a Young s modulus of 4210 Pa and M = 0 to guarantee infinitesimal deformations. The difference between maximum fluid velocities increased to 10.8% for an infusion pressure of 500 Pa, while the radial displacement from the nonlinear analyses was 14.6% higher than that of the linear closed-form solution (Figure 3). This indicates that even for an artificially stiffer material, finite strains at 500 Pa occur and the nonlinear analyses diverge from the linear solutions. For the Young s modulus of 421 Pa, even at a low infusion pressure of 200 Pa there were important variations between the closed-form linear solution and the nonlinear analyses with constant hydraulic conductivity (Figure 4), with differences of 63.7% and -52.3% for the maximum values of fluid velocity and radial displacement with respect to the results obtained for the parameter set with α 1 = 1. While there was only a small difference of 3.7% between maximum values of fluid velocity for the analyses with the two sets of material parameters (α 1 = -4.7 vs. α 1 = 1) at this infusion pressure, there was a moderate difference of 11.6% between the maximum values of the radial displacement. These results suggest that the differences between the nonlinear analyses and the linear solution are mainly due to geometric nonlinearities. Based on this, the following results are only presented for the parameter set with α 1 =

14 Allowing the hydraulic conductivity to vary with deformation with M = 1, variations in the initial hydraulic conductivity κ 0 caused important differences in the fluid velocity distributions but did not significantly alter the maximum radial displacement or the pore pressure curves (Figure 5). Changes in the parameter M, which governs the variation of hydraulic conductivity with deformation, caused important differences in all distributions (Figure 6). Mainly, the increment of M caused a reduction in the slope of the pore pressure curve, an increase in the maximum fluid velocity, and a change in the form of the displacement curve that was monotonic for M = 0 but had local minimum for M = 2. For the baseline material properties (E = 421 Pa), local circumferential and radial stretch ratios of approximately 6 and 0.34, respectively, were obtained at the infusion cavity along with significant increases in the fluid fraction (Figure 7). For the baseline Young s modulus of 421 Pa, maximum radial displacement, fluid velocity and flow rate exhibited a significant nonlinear behavior with respect to the infusion pressure. Specifically, the displacement and flow rate increased exponentially while the fluid velocity depicted a bell shaped curve (Figure 8). On the other hand, for the Young s modulus of 4210 Pa, all three functions displayed an approximately linear behavior with respect to the infusion pressure (Figure 8). Important differences in the normalized interstitial concentration were obtained from the analyses using different values of the Young s modulus and hydraulic conductivity (Figure 9). These distributions correspond to infusion volumes of 4.85 ml and 28.8 ml at 30 s and 1200 s, respectively, for the more compliant material and to volumes of 0.18 ml and 1.56 ml at 30 s and 1200 s, respectively, for the stiffer material. At 1200 s, the content of infused agent (30.29) for E = 421 Pa was almost twenty-fold that (1.59) for E 14

15 = 4210 Pa using a hydraulic conductivity κ 0 = 1 mm 4 N -1 s -1, while for κ 0 = 0.1 mm 4 N -1 s -1 the content (5.41) for E = 421 Pa was twenty seven-fold that (0.20) obtained with E = 4210 Pa. Since the flow rate was greater for E = 421 Pa than for E = 4210 Pa and the infusion cavity had increased in radius more substantially, the corresponding concentration distributions showed increased penetration of the infused agent. There were striking differences among the normalized bulk concentration distributions using different values of the Young s modulus and hydraulic conductivity (Figure 10). As the tissue deformed, the size of the infusion sphere increased, and within the infusion sphere the bulk concentration (per unit total volume) was equal to the aqueous concentration. At the interface of the infusion sphere with the tissue, there was a sudden drop in the bulk concentration since the infused agent can only be transported into the fluid portions of the tissue. This drop was greatly pronounced in the stiffer material (E = 4210 Pa) since the fluid fraction φ f reached only moderate increments from the baseline value of 0.2 to values between 0.25 and 0.3, in contrast with the minor drop for the more compliant material (E = 421 Pa) due to the important increase of the fluid fraction in the vicinity of the infusion sphere to values between 0.8 and Discussion Under the framework of biphasic theory, a mathematical model was proposed here for infusion into brain tissue using a hyperelastic constitutive equation for the solid phase that can describe nonlinear stress-strain curves under finite deformations documented in experimental studies. 9,13 In addition, a hydraulic conductivity dependent on deformation can be considered, which has been regarded as an important factor influencing both the 15

16 elastic response and associated fluid flow. 8,32,36 Deformations and fluid velocity fields from the biphasic analyses can then be used to predict mass transport in the brain, which may be useful to accurately evaluate the influence of various parameters in the outcome of drug delivery protocols into the brain. Because commercial finite element solvers do not currently allow for the inclusion of all the desired effects in the modeling of infusion, a custom-written finite element code was implemented with the assumption of spherically symmetry. This allowed for an efficient implementation of the nonlinear iterative scheme by using two-node elements that represent spherical domains. The spherical model was used to study the physics that occurs during infusion and to test the importance of each of the nonlinear effects in such simulations. The numeric solution converged to the linear under infinitesimal deformations, e.g., for lower infusion pressures and higher Young s modulus, maximum radial displacements were of the order of microns and differences between maximum radial displacement obtained with the closed form linear solution and the nonlinear finite element analyses were less than 0.7%. However, an increase of infusion pressure yielded maximum radial displacements of the order of 8% of the infusion radius, and the difference between the radial displacements from both analyses increased to 15%, which indicates the important contribution of the nonlinear effects in the analyses of drug infusion even considering a relatively high elastic modulus (4210 Pa). Higher displacements from the nonlinear model with respect to those from the linear solution may also be predicted with the infinitesimal solution by comparing displacements obtained with infusion spheres of different radius. On the other hand, the similarities between numerical results 16

17 obtained with two different sets of nonlinear parameters indicate that the nonlinear effects are mainly due to geometrical changes of the infusion cavity taken into account in the finite element procedure and not to the material nonlinearities. This can be explained since maximum values of strain are highly localized at the infusion cavity, affecting only a small percentage of the material (Figure 7). A similar conclusion about the importance of material nonlinearities was recently obtained by Wittek et al., 37 who studied the influence of different constitutive formulations in predicting brain deformation during craniotomy-induced shift. Different from the results reported by Chen and Sarntinoranont, 8 this analysis predicts important changes of fluid velocity, pore pressure, and displacement distributions with variations of the parameter M, which defines the change of hydraulic conductivity with deformation. The reason is that strains calculated in this study are higher than those of Chen and Sarntinoranont 8 due to the consideration of smaller elastic moduli and the updated geometry at each time step. Reductions of the slope of pore pressure with increments of parameter M near the infusion cavity may be mainly attributed to the corresponding growth of the hydraulic conductivity, due to the high increase of fluid content at the infusion cavity (fourfold the baseline value 0.2). The reduction of pore pressure slope was greatly counteracted by the rise in hydraulic conductivity and therefore, relative fluid velocity greatly increased with M, since it is equal to the product of pressure slope with the hydraulic conductivity. As a consequence, an important increase of fluid flow was also observed under these conditions, which implied a higher volume of drug distribution (Figure 9). 17

18 Differences in the shape of the curves of fluid velocity versus infusion pressure for different values of the Young s modulus can be explained since there are two mechanisms responsible for fluid velocity changes with variations of the infusion pressure (Figure 8b). First, considering a constant radius of the infusion sphere, increments of infusion pressure tend to raise the slope of the pressure curve, which also increases fluid velocity. On the other hand, increases of the infusion cavity due to deformations tend to reduce the slope of the pressure curve and, consequently, the fluid velocity. Therefore, at lower strains, the first mechanism dominates and this is why the relationship between fluid velocity and infusion pressure is approximately linear for a higher Young s modulus. At higher deformations the second mechanism may dominate since the growth of the infusion sphere becomes important at higher infusion pressures and this explains the bell shaped form of the curve when a lower Young s modulus was considered. However, since the flow rate depends on the square of the radius of the infusion sphere, an increment of the infusion sphere implies an increase in the flow rate even though the fluid velocity may be lower (Figure 8c). The larger penetration of drug into the tissue observed for the more compliant material may be mainly attributed to the greater flow rate, which is a consequence of the important increment of the radius of the infusion sphere (fivefold the radius of initial sphere), in contrast with the moderate increment of the infusion sphere (~10%) obtained for the stiffer material. Differences in the shape of the normalized bulk concentration curves between the stiffer and compliant materials are due to the great changes that the fluid fraction near the infusion sphere (approximately four to fivefold the reference value of 0.2) in the more compliant material, results that have been documented experimentally in hydrocephalic cats. 15 Considering that the Young s modulus of

19 Pa is more representative of the properties of the brain tissue, it can be concluded that nonlinear geometric effects represented in a larger infusion cavity should be taken into account for a more accurate simulation of mass transport. While the purpose of this work was to study the physics of constant pressure infusions, the primary limitation of this work is the use of a simplified spherical geometry and associated boundary conditions. For example, including the interaction between the brain and skull would require a more sophisticated boundary condition than the zero traction currently applied to the outside of the spherical domain, such as that proposed recently by Wittek et al. 38 Other limitations of this study include the use of some material parameters that have been extracted from the literature and have not been measured directly (i.e. Poisson s ratio) and others that may not necessarily apply to the model, such as the parameter M in the formula for the nonlinear variation of hydraulic conductivity with strain. In addition, transvascular flow may be an important effect that should be included in future studies. The isotropic and homogeneous model proposed here is only a crude approximation of the microstructure of the brain. Other experimental and analytical studies have to be undertaken to quantify anisotropies and heterogeneities of brain and include these effects for the description of the mechanical response of the tissue. Acknowledgments J. J. García and J. H. Smith thank the Universidad del Valle and Lafayette College for giving them the time to undertake this study. Furthermore, the authors thank Dr. Raghu Raghavan for discussions regarding measuring concentration distributions in vivo. 19

20 References 1. Almeida, E.S. and R. L. Spilker. Mixed and penalty finite element models for the nonlinear behavior of biphasic soft tissues in finite deformations: Part I Alternate formulations. Comput. Methods Biomech. Biomed. Eng. 1:25 46, Barry, S.I. and G. K. Aldis. Flow-induced deformation from pressurized cavities in absorbing porous tissues. Bull. Math. Biol. 54: , Basser, P. J. Interstitial pressure, volume, and flow during infusion into brain tissue. Microvascular Research 44:143 65, Belytschko, T., W. K. Liu, and B. Moran. Nonlinear Finite Element for Continua and Structures, Chichester: John Wiley & Sons, Ltd., Bilston, L. E., Z. Liu, and N. Phan-Thien. Large strain behaviour of brain tissue in shear: Some experimental data and differential constitutive model. Biorheology 38:335 45, Bilston, L.E., Z. Liu, and N. Phan-Thien. Linear viscoelastic properties of bovine brain tissue in shear. Biorheology 34: , Bruehlmeier, M., U. Roelcke, P. Blauenstein, J. Missimer, P. A. Schubiger, J. T. Locher, R. Pellikka, and S. M. Ametamey. Measurement of the extracellular space in 20

21 brain tumors using 76 Br-bromide and PET. Journal of Nuclear Medicine 44: , Chen, X. and M. Sarntinoranont. Biphasic finite element model of solute transport for direction infusion into nervous tissue. Ann. Biomed. Eng. 35: , Cheng, S. and L. E. Bilston. Unconfined compression of white matter. J. Biomech. 40: , Clarke, M. J. and F. B. Meyer. The history of mathematical modeling in hydrocephalus, Neurosurgical Focus 22:E3, Donnelly, B. R. and J. Medige. Shear properties of human brain tissue. J. Biomech. Eng. 119: , Dutta-Roy, T., A. Wittek, and K. Miller. Biomechanical modelling of normal pressure hydrocephalus. J. Biomech. 41: , Franceschini, G., D. Bigoni, P. Regitnig, and G. A. Holzapfel. Brain tissue deforms similarly to filled elastomers and follows consolidation theory. Journal of the Mechanics and Physics of Solids 54: , García, J. J. and D.H. Cortés. Modelo bifásico no lineal de elementos finitos para el análisis mecánico de tejidos biológicos. Parte II Implementación numérica y validación. Ingeniería & Desarrollo 19:57 73,

22 15. Kaczmarek, M., R. P. Subramaniam, and S. R. Neff. The hydromechanics of hydrocephalus: steady-state solutions for cylindrical geometry. Bulletin of Mathematical Biology 59, , Linninger, A. A., M. R. Somayaji, T. Erickson, X. Guo, and R. D. Penn. Computational methods for predicting drug transport in anisotropic and heterogeneous brain tissue. J. Biomech. 41: , Linninger, A. A., M. R. Somayaji, M. Mekarski, and L. Zhang. Prediction of convection-enhanced drug delivery to the human brain. J. Theor. Biol. 250: , Mendis, K. K., R. L. Stalnaker, and S. H. Advani. A constitutive relationship for large deformation finite element model of brain tissue. J. Biomech. Eng. 117: , Miller, K. Constitutive model of brain tissue suitable for finite element analysis of surgical procedures. J. Biomech. 32: , Miller, K. and K. Chinzei. Constitutive modelling of brain tissue: Experiment and theory. J. Biomech. 30: , Miller, K. and K. Chinzei. Mechanical properties of brain tissue in tension. J. Biomech. 35: ,

23 22. Morrison, P. F., D. W. Laske, H. Bobo, E. H. Oldfield, and R. L. Dedrick. Highflow microinfusion: Tissue penetration and pharmacodynamics. Am. J. Physiol. 266:R292 R305, Mow, V. C., W. Zhu, and A. Ratcliffe. Structure and function of articular cartilage and meniscus. In: Basic Orthopaedic Biomechanics, edited by V. C. Mow, W. C. Hayes. New York: Raven Press, Netti, P. A., F. Travascio, and R. K. Jain. Coupled Macromolecular Transport and Gel Mechanics: Poroviscoelastic Approach. AIChE J. 49: , Ogden, R. W. Non-Linear Elastic Deformations. Mineola, New York: Dover Publications, Inc., Prange, M. T. and S. S. Margulies. Regional, directional, and age-dependent properties of the brain undergoing large deformation. J. Biomech. Eng. 124: , Prange, M. T., D. F. Meaney, and S. S. Margulies. Defining brain mechanical properties: Effects of region, direction, and species. Stapp Car Crash Journal 44: ,

24 28. Sarntinoranont, M., R. K. Banerjee, R. R. Lonser, and P. F. Morrison. A computational model of direct interstitial infusion of macromolecules into the spinal cord. Ann. Biomed. Eng. 31: , Sarntinoranont, M., X. Chen, J. Zhao, and T. H. Mareci. Computational model of interstitial transport in the spinal cord using diffusion tensor imaging. Ann. Biomed. Eng. 34: , Smillie, A., I. Sobey, and Z. Molnar. A hydroelastic model of hydrocephalus, Journal of Fluid Mechanics 539: , Smith, J. H. and J. A. C. Humphrey. Interstitial transport and transvascular fluid exchange during infusion into brain and tumor tissue. Microvascular Research 73:58 73, Sobey, I. and B. Wirth. Effect of non-linear permeability in a spherically symmetric model of hydrocephalus, Math. Med. Biol. 23: , Taylor, Z. and K. Miller. Reassessment of brain elasticity for analysis of biomechanisms of hydrocephalus, J. Biomech. 37: , Tenti, G., J. M. Drake, and S. Sivaloganathan. Brain biomechanics: mathematical modeling of hydrocephalus. Neurol. Res. 22:19 24,

25 35. Truskey, G. A., F. Yuan, D. F. Katz. Transport Phenomena in Biological Systems, Upper Saddle River, New Jersey: Pearson Prentice Hall, Wirth, B. and I. Sobey. An axisymmetric and fully 3D poroelastic model for the evolution of hydrocephalus, Math. Med. Biol. 23: , Wittek, A., T. Hawkins, and K. Miller, On the unimportance of constitutive models in computing brain deformations for image-guided surgery, Biomechanics and Modeling in Mechanobiology, DOI /s Wittek, A., K. Miller, R. Kikinis, and S. K. Warfield. Patient-specific model of brain deformation: Application to medical image registration. J. Biomech. 40, ,

26 Table 1. Summary of material parameters values used in this study. Parameter Range References Young s modulus, E Pa 21 Poisson s ratio, ν 0.35 Strain energy function exponent, α 1-4.7; Initial hydraulic conductivity, κ mm 4 N ,9 s Nonlinear parameter, M 0 2 Porosity, φ f 0.2 8,32,36 7 Diffusivity, D mm 2 s

27 Figure 1. Schematic diagram of a spherically symmetric model of the brain and infusion site. Figure 2. Stress-strain curves under uniaxial stress obtained for the two sets of nonlinear parameters. Since the same Young s modulus and Poisson s ratio were used, the two curves have the same slope at zero strain, i.e., stretch ratio equal to one. 27

28 (a) Pore pressure (b) Fluid velocity (c) Radial displacement Figure 3. Steady state pore pressure, fluid velocity, and radial displacement distributions obtained for the closed form solution with E = 4210 Pa and the nonlinear strain energy function at two infusion pressures. 28

29 (a) Pore pressure (b) Fluid velocity (c) Radial displacement Figure 4. Steady state pore pressure, fluid velocity, and radial displacement distributions obtained for the closed-form linear solution with E = 421 Pa and the nonlinear strain energy function with two sets of material parameters at an infusion pressure of 200 Pa. 29

30 (a) Pore pressure (b) Fluid velocity (c) Radial displacement Figure 5. Steady state pore pressure, fluid velocity, and radial displacement distributions for different values of hydraulic conductivity κ 0 for α 1 = -4.7 and M = 1 at an infusion pressure of 500 Pa. Note that the pore pressure distributions are nearly coincident for κ 0 = 0.1 mm 4 N -1 s -1 and 1.0 mm 4 N -1 s -1, and that the radial displacement distributions are nearly coincident for κ 0 = 1 mm 4 N -1 s -1 and 4 mm 4 N -1 s

31 (a) Pore pressure (b) Fluid velocity (c) Radial displacement Figure 6. Steady state pore pressure, fluid velocity, and radial displacement distributions for different values of nonlinear hydraulic conductivity parameter M for α 1 = -4.7 and κ 0 = 0.1 mm 4 N -1 s -1 at infusion pressure of 500 Pa. 31

32 Figure 7. Steady state fluid fraction, radial stretch, and circumferential stretch distributions displaying significant maxima localized at the infusion site, for α 1 = -4.7 and κ 0 = 0.1 mm 4 N -1 s -1 at an infusion pressure of 500 Pa. 32

33 (a) Radial displacement (b) Fluid velocity (c) Flow rate Figure 8. Steady state maximum radial displacement, fluid velocity, and flow rate as a function of infusion pressure for the nonlinear strain energy function with α 1 = -4.7, κ 0 = 0.1 mm 4 N -1 s -1, M = 1, and two values of the Young s modulus. 33

34 (a) 30 seconds (b) 1200 seconds Figure 9. Normalized interstitial concentration distributions at (a) 30 s and (b) 1200 s for the nonlinear strain energy function with α 1 = -4.7 and M = 1 using two values of the Young s modulus E and two values of the hydraulic conductivity κ 0 at an infusion pressure of 500 Pa. (a) 30 seconds (b) 1200 seconds Figure 10. Normalized bulk concentration distributions at (a) 30 s and (b) 1200 s for the nonlinear strain energy function with α 1 = -4.7 and M = 1 using two values of the Young s modulus E and two values of the hydraulic conductivity κ 0 at an infusion pressure of 500 Pa. 34

A nonlinear biphasic model of flow-controlled infusion in brain: Fluid transport. and tissue deformation analyses. Joshua H. Smith

A nonlinear biphasic model of flow-controlled infusion in brain: Fluid transport. and tissue deformation analyses. Joshua H. Smith A nonlinear biphasic model of flow-controlled infusion in brain: Fluid transport and tissue deformation analyses Joshua H. Smith Department of Mechanical Engineering Lafayette College Easton, PA 18042

More information

Constitutive model of brain tissue suitable for finite element analysis of surgical procedures

Constitutive model of brain tissue suitable for finite element analysis of surgical procedures Journal of Biomechanics 32 (1999 531 537 Technical Note Constitutive model of brain tissue suitable for finite element analysis of surgical procedures Karol Miller* Department of Mechanical and Materials

More information

Modelling Anisotropic, Hyperelastic Materials in ABAQUS

Modelling Anisotropic, Hyperelastic Materials in ABAQUS Modelling Anisotropic, Hyperelastic Materials in ABAQUS Salvatore Federico and Walter Herzog Human Performance Laboratory, Faculty of Kinesiology, The University of Calgary 2500 University Drive NW, Calgary,

More information

Finite Element Analysis of Permeation Tests on Articular Cartilage under Different Testing Conditions Using COMSOL Multiphysics.

Finite Element Analysis of Permeation Tests on Articular Cartilage under Different Testing Conditions Using COMSOL Multiphysics. Excerpt from the Proceedings of the COMSOL Conference 2010 Paris Finite Element Analysis of Permeation Tests on Articular Cartilage under Different Testing Conditions Using COMSOL Multiphysics. Grazia

More information

Wave Propagation Through Soft Tissue Matter

Wave Propagation Through Soft Tissue Matter Wave Propagation Through Soft Tissue Matter Marcelo Valdez and Bala Balachandran Center for Energetic Concepts Development Department of Mechanical Engineering University of Maryland College Park, MD 20742-3035

More information

Radial Growth of a Micro-Void in a Class of. Compressible Hyperelastic Cylinder. Under an Axial Pre-Strain *

Radial Growth of a Micro-Void in a Class of. Compressible Hyperelastic Cylinder. Under an Axial Pre-Strain * dv. Theor. ppl. Mech., Vol. 5, 2012, no. 6, 257-262 Radial Growth of a Micro-Void in a Class of Compressible Hyperelastic Cylinder Under an xial Pre-Strain * Yuxia Song, Datian Niu and Xuegang Yuan College

More information

Skinfold creep under load of caliper. Linear visco- and poroelastic model simulations

Skinfold creep under load of caliper. Linear visco- and poroelastic model simulations Acta of Bioengineering and Biomechanics Vol. 17, No. 4, 2015 Original paper DOI: 10.5277/ABB-00128-2014-04 Skinfold creep under load of caliper. Linear visco- and poroelastic model simulations JOANNA NOWAK

More information

BRAIN BIOMECHANICS: CONSOLIDATION THEORY OF HYDROCEPHALUS. VARIABLE PERMEABILITY AND TRANSIENT EFFECTS

BRAIN BIOMECHANICS: CONSOLIDATION THEORY OF HYDROCEPHALUS. VARIABLE PERMEABILITY AND TRANSIENT EFFECTS CANADIAN APPLIED MATHEMATICS QUARTERLY Volume 7, Number 1, Spring 1999 BRAIN BIOMECHANICS: CONSOLIDATION THEORY OF HYDROCEPHALUS. VARIABLE PERMEABILITY AND TRANSIENT EFFECTS M. STASTNA, G. TENTI, S. SIVALOGANATHAN

More information

Lectures on. Constitutive Modelling of Arteries. Ray Ogden

Lectures on. Constitutive Modelling of Arteries. Ray Ogden Lectures on Constitutive Modelling of Arteries Ray Ogden University of Aberdeen Xi an Jiaotong University April 2011 Overview of the Ingredients of Continuum Mechanics needed in Soft Tissue Biomechanics

More information

Stress-Strain Analysis of Abdominal Aortic Wall: A Case of 3D Geometry Simulation

Stress-Strain Analysis of Abdominal Aortic Wall: A Case of 3D Geometry Simulation Energy Research Journal 1 (2): 165-170, 2010 ISSN 1949-0151 2010 Science Publications Stress-Strain Analysis of Abdominal Aortic Wall: A Case of 3D Geometry Simulation P. Khamdaengyodtai, P. Sakulchangsatjatai

More information

Final Project: Indentation Simulation Mohak Patel ENGN-2340 Fall 13

Final Project: Indentation Simulation Mohak Patel ENGN-2340 Fall 13 Final Project: Indentation Simulation Mohak Patel ENGN-2340 Fall 13 Aim The project requires a simulation of rigid spherical indenter indenting into a flat block of viscoelastic material. The results from

More information

MATHEMATICAL MODELS OF BRAIN

MATHEMATICAL MODELS OF BRAIN Research Report of Intelligent Systems for Medicine Laboratory Report # ISML/01/2006, February 2006 MATHEMATICAL MODELS OF BRAIN DEFORMATION BEHAVIOUR FOR COMPUTER-INTEGRATED NEUROSURGERY K. Miller, Z.

More information

FOR PROOFREADING ONLY

FOR PROOFREADING ONLY Annals of Biomedical Engineering, Vol. 33, No. 4, May 2005 ( 2005) pp. 492 499 DOI: 10.1007/s10439-005-2506-3 Large Deformation Finite Element Analysis of Micropipette Aspiration to Determine the Mechanical

More information

Simple Shear Testing of Parallel-Fibered Planar Soft Tissues

Simple Shear Testing of Parallel-Fibered Planar Soft Tissues John C. Gardiner Jeffrey A. Weiss e-mail: jeff.weiss@utah.edu Department of Bioengineering, The University of Utah, 50 South Central Campus Drive #2480, Salt Lake City, UT 84112 Simple Shear Testing of

More information

Biomechanics. Soft Tissue Biomechanics

Biomechanics. Soft Tissue Biomechanics Biomechanics cross-bridges 3-D myocardium ventricles circulation Image Research Machines plc R* off k n k b Ca 2+ 0 R off Ca 2+ * k on R* on g f Ca 2+ R0 on Ca 2+ g Ca 2+ A* 1 A0 1 Ca 2+ Myofilament kinetic

More information

Determination of Mechanical Properties of Elastomers Using Instrumented Indentation

Determination of Mechanical Properties of Elastomers Using Instrumented Indentation Determination of Mechanical Properties of Elastomers Using Instrumented Indentation, Antonios E. Giannakopoulos and Dimitrios Bourntenas University of Thessaly, Department of Civil Engineering, Volos 38334,

More information

Module 7: Micromechanics Lecture 29: Background of Concentric Cylinder Assemblage Model. Introduction. The Lecture Contains

Module 7: Micromechanics Lecture 29: Background of Concentric Cylinder Assemblage Model. Introduction. The Lecture Contains Introduction In this lecture we are going to introduce a new micromechanics model to determine the fibrous composite effective properties in terms of properties of its individual phases. In this model

More information

A Comparison Between Mechano-Electrochemical and Biphasic Swelling Theories for Soft Hydrated Tissues

A Comparison Between Mechano-Electrochemical and Biphasic Swelling Theories for Soft Hydrated Tissues A Comparison Between Mechano-Electrochemical and Biphasic Swelling Theories for Soft Hydrated Tissues W. Wilson C. C. van Donkelaar 1 J. M. Huyghe Department of Biomedical Engineering, Eindhoven University

More information

A Mechanism for Ventricular Expansion in Communicating Hydrocephalus

A Mechanism for Ventricular Expansion in Communicating Hydrocephalus Proceedings of the OCCAM Fields MITACS Biomedical Problem Solving Workshop, 2009 A Mechanism for Ventricular Expansion in Communicating Hydrocephalus Problem Presenter: Miles Johnston (Sunnybrook Health

More information

TIME-DEPENDENT BEHAVIOR OF PILE UNDER LATERAL LOAD USING THE BOUNDING SURFACE MODEL

TIME-DEPENDENT BEHAVIOR OF PILE UNDER LATERAL LOAD USING THE BOUNDING SURFACE MODEL TIME-DEPENDENT BEHAVIOR OF PILE UNDER LATERAL LOAD USING THE BOUNDING SURFACE MODEL Qassun S. Mohammed Shafiqu and Maarib M. Ahmed Al-Sammaraey Department of Civil Engineering, Nahrain University, Iraq

More information

Brain Shift Computation Using a Fully Nonlinear Biomechanical Model

Brain Shift Computation Using a Fully Nonlinear Biomechanical Model Brain Shift Computation Using a Fully Nonlinear Biomechanical Model Adam Wittek 1, Ron Kikinis 2, Simon K. Warfield 3, and Karol Miller 1 1 Intelligent Systems for Medicine Laboratory, School of Mechanical

More information

MECHANICAL CHARACTERIZATION OF BRAIN TISSUE

MECHANICAL CHARACTERIZATION OF BRAIN TISSUE ROLE OF MOISTURE CONTENT IN MECHANICAL CHARACTERIZATION OF BRAIN TISSUE HENRY W. HASLACH, JR. DEPARTMENT OF MECHANICAL ENGINEERING CENTER for ENERGETICS CONCEPTS DEVELOPMENT UNIVERSITY OF MARYLAND COLLEGE

More information

In all of the following equations, is the coefficient of permeability in the x direction, and is the hydraulic head.

In all of the following equations, is the coefficient of permeability in the x direction, and is the hydraulic head. Groundwater Seepage 1 Groundwater Seepage Simplified Steady State Fluid Flow The finite element method can be used to model both steady state and transient groundwater flow, and it has been used to incorporate

More information

Chapter 1. Continuum mechanics review. 1.1 Definitions and nomenclature

Chapter 1. Continuum mechanics review. 1.1 Definitions and nomenclature Chapter 1 Continuum mechanics review We will assume some familiarity with continuum mechanics as discussed in the context of an introductory geodynamics course; a good reference for such problems is Turcotte

More information

Biotransport: Principles

Biotransport: Principles Robert J. Roselli Kenneth R. Diller Biotransport: Principles and Applications 4 i Springer Contents Part I Fundamentals of How People Learn (HPL) 1 Introduction to HPL Methodology 3 1.1 Introduction 3

More information

On the unimportance of constitutive models in computing brain deformation for image-guided surgery

On the unimportance of constitutive models in computing brain deformation for image-guided surgery Biomech Model Mechanobiol (2009) 8:77 84 DOI 10.1007/s10237-008-0118-1 SHORT COMMUNICATION On the unimportance of constitutive models in computing brain deformation for image-guided surgery Adam Wittek

More information

A PERTURBATION THEORY APPROACH TO STUDY VARIABLE PERMEABILITY EFFECTS IN THE 1D CONSOLIDATION THEORY OF HYDROCEPHALUS

A PERTURBATION THEORY APPROACH TO STUDY VARIABLE PERMEABILITY EFFECTS IN THE 1D CONSOLIDATION THEORY OF HYDROCEPHALUS Dynamics of Continuous, Discrete and Impulsive Systems Series B: Applications & Algorithms 25 (2018) 259-275 Copyright c 2018 Watam Press A PERTURBATION THEORY APPROACH TO STUDY VARIABLE PERMEABILITY EFFECTS

More information

4 Undrained Cylindrical Cavity Expansion in a Cam-Clay Medium

4 Undrained Cylindrical Cavity Expansion in a Cam-Clay Medium Undrained Cylindrical Cavity Expansion in a Cam-Clay Medium 4-1 4 Undrained Cylindrical Cavity Expansion in a Cam-Clay Medium 4.1 Problem Statement The stress and pore pressure changes due to the expansion

More information

Full-field measurements and identification for biological soft tissues: application to arteries in vitro

Full-field measurements and identification for biological soft tissues: application to arteries in vitro Centre for Health Engineering CNRS UMR 5146 INSERM IFR 143 Prof. Stéphane Avril Full-field measurements and identification for biological soft tissues: application to arteries in vitro using single-gage

More information

Exercise: concepts from chapter 8

Exercise: concepts from chapter 8 Reading: Fundamentals of Structural Geology, Ch 8 1) The following exercises explore elementary concepts associated with a linear elastic material that is isotropic and homogeneous with respect to elastic

More information

2.1 Strain energy functions for incompressible materials

2.1 Strain energy functions for incompressible materials Chapter 2 Strain energy functions The aims of constitutive theories are to develop mathematical models for representing the real behavior of matter, to determine the material response and in general, to

More information

MECHANICAL PROPERTIES OF POLYTETRAFLOUROETHYLENE ELASTOMER MEMBRANE FOR DYNAMIC CELL CULTURE TESTING ABSTRACT INTRODUCTION

MECHANICAL PROPERTIES OF POLYTETRAFLOUROETHYLENE ELASTOMER MEMBRANE FOR DYNAMIC CELL CULTURE TESTING ABSTRACT INTRODUCTION MECHANICAL PROPERTIES OF POLYTETRAFLOUROETHYLENE ELASTOMER MEMBRANE FOR DYNAMIC CELL CULTURE TESTING Carolyn Hampton 1, Gregory D. Webster 1, Beverly Rzigalinski 2, Hampton C. Gabler 1 1 Virginia Tech

More information

in this web service Cambridge University Press

in this web service Cambridge University Press CONTINUUM MECHANICS This is a modern textbook for courses in continuum mechanics. It provides both the theoretical framework and the numerical methods required to model the behavior of continuous materials.

More information

An Anisotropic Material Model for Image Guided Neurosurgery

An Anisotropic Material Model for Image Guided Neurosurgery An Anisotropic Material Model for Image Guided Neurosurgery Corey A. Kemper 1, Ion-Florin Talos 2, Alexandra Golby 2, Peter M. Black 2, Ron Kikinis 2, W. Eric L. Grimson 1, and Simon K. Warfield 2 1 Massachusetts

More information

Effect of embedment depth and stress anisotropy on expansion and contraction of cylindrical cavities

Effect of embedment depth and stress anisotropy on expansion and contraction of cylindrical cavities Effect of embedment depth and stress anisotropy on expansion and contraction of cylindrical cavities Hany El Naggar, Ph.D., P. Eng. and M. Hesham El Naggar, Ph.D., P. Eng. Department of Civil Engineering

More information

Unconfined Compression of Articular Cartilage: Nonlinear Behavior and Comparison With a Fibril-Reinforced Biphasic Model

Unconfined Compression of Articular Cartilage: Nonlinear Behavior and Comparison With a Fibril-Reinforced Biphasic Model M. Fortin Institute of Biomedical Engineering, Ecole Polytechnique, Montreal, Quebec, Canada J. Soulhat A. Shirazi-Adl Department of Mechanical Engineering, Ecole Polytechnique, Montreal, Quebec, Canada

More information

Discontinuous Galerkin methods for nonlinear elasticity

Discontinuous Galerkin methods for nonlinear elasticity Discontinuous Galerkin methods for nonlinear elasticity Preprint submitted to lsevier Science 8 January 2008 The goal of this paper is to introduce Discontinuous Galerkin (DG) methods for nonlinear elasticity

More information

HIGHLY ADAPTABLE RUBBER ISOLATION SYSTEMS

HIGHLY ADAPTABLE RUBBER ISOLATION SYSTEMS th World Conference on Earthquake Engineering Vancouver, B.C., Canada August -6, 24 Paper No. 746 HIGHLY ADAPTABLE RUBBER ISOLATION SYSTEMS Luis DORFMANN, Maria Gabriella CASTELLANO 2, Stefan L. BURTSCHER,

More information

DEVELOPMENT OF A CONTINUUM PLASTICITY MODEL FOR THE COMMERCIAL FINITE ELEMENT CODE ABAQUS

DEVELOPMENT OF A CONTINUUM PLASTICITY MODEL FOR THE COMMERCIAL FINITE ELEMENT CODE ABAQUS DEVELOPMENT OF A CONTINUUM PLASTICITY MODEL FOR THE COMMERCIAL FINITE ELEMENT CODE ABAQUS Mohsen Safaei, Wim De Waele Ghent University, Laboratory Soete, Belgium Abstract The present work relates to the

More information

Continuum Mechanics and Theory of Materials

Continuum Mechanics and Theory of Materials Peter Haupt Continuum Mechanics and Theory of Materials Translated from German by Joan A. Kurth Second Edition With 91 Figures, Springer Contents Introduction 1 1 Kinematics 7 1. 1 Material Bodies / 7

More information

Studies on flow through and around a porous permeable sphere: II. Heat Transfer

Studies on flow through and around a porous permeable sphere: II. Heat Transfer Studies on flow through and around a porous permeable sphere: II. Heat Transfer A. K. Jain and S. Basu 1 Department of Chemical Engineering Indian Institute of Technology Delhi New Delhi 110016, India

More information

Characterisation and Modelling of a Melt-Extruded LDPE Closed Cell Foam

Characterisation and Modelling of a Melt-Extruded LDPE Closed Cell Foam Characterisation and Modelling of a Melt-Extruded LDPE Closed Cell Foam Qusai Hatem Jebur 1,a, Philip Harrrison 1,b, Zaoyang Guo,c, Gerlind Schubert 1,d & Vincent Navez 3,e 1 School of Engineering, University

More information

The Rotating Inhomogeneous Elastic Cylinders of. Variable-Thickness and Density

The Rotating Inhomogeneous Elastic Cylinders of. Variable-Thickness and Density Applied Mathematics & Information Sciences 23 2008, 237 257 An International Journal c 2008 Dixie W Publishing Corporation, U. S. A. The Rotating Inhomogeneous Elastic Cylinders of Variable-Thickness and

More information

Localization in Undrained Deformation

Localization in Undrained Deformation Localization in Undrained Deformation J. W. Rudnicki Dept. of Civil and Env. Engn. and Dept. of Mech. Engn. Northwestern University Evanston, IL 621-319 John.Rudnicki@gmail.com Fourth Biot Conference on

More information

Development of a Finite Element Procedure of Contact Analysis for Articular Cartilage with Large Deformation Based on the Biphasic Theory

Development of a Finite Element Procedure of Contact Analysis for Articular Cartilage with Large Deformation Based on the Biphasic Theory 537 Development of a Finite Element Procedure of Contact Analysis for Articular Cartilage with Large Deformation Based on the Biphasic Theory Xian CHEN,YuanCHEN and Toshiaki HISADA Despite the importance

More information

How are calculus, alchemy and forging coins related?

How are calculus, alchemy and forging coins related? BMOLE 452-689 Transport Chapter 8. Transport in Porous Media Text Book: Transport Phenomena in Biological Systems Authors: Truskey, Yuan, Katz Focus on what is presented in class and problems Dr. Corey

More information

Analytical and Numerical Investigations on the Vertical Seismic Site Response

Analytical and Numerical Investigations on the Vertical Seismic Site Response Analytical and Numerical Investigations on the Vertical Seismic Site Response Bo Han, Lidija Zdravković, Stavroula Kontoe Department of Civil and Environmental Engineering, Imperial College, London SW7

More information

PSEUDO ELASTIC ANALYSIS OF MATERIAL NON-LINEAR PROBLEMS USING ELEMENT FREE GALERKIN METHOD

PSEUDO ELASTIC ANALYSIS OF MATERIAL NON-LINEAR PROBLEMS USING ELEMENT FREE GALERKIN METHOD Journal of the Chinese Institute of Engineers, Vol. 27, No. 4, pp. 505-516 (2004) 505 PSEUDO ELASTIC ANALYSIS OF MATERIAL NON-LINEAR PROBLEMS USING ELEMENT FREE GALERKIN METHOD Raju Sethuraman* and Cherku

More information

MODELING OF ELASTO-PLASTIC MATERIALS IN FINITE ELEMENT METHOD

MODELING OF ELASTO-PLASTIC MATERIALS IN FINITE ELEMENT METHOD MODELING OF ELASTO-PLASTIC MATERIALS IN FINITE ELEMENT METHOD Andrzej Skrzat, Rzeszow University of Technology, Powst. Warszawy 8, Rzeszow, Poland Abstract: User-defined material models which can be used

More information

Cellular solid structures with unbounded thermal expansion. Roderic Lakes. Journal of Materials Science Letters, 15, (1996).

Cellular solid structures with unbounded thermal expansion. Roderic Lakes. Journal of Materials Science Letters, 15, (1996). 1 Cellular solid structures with unbounded thermal expansion Roderic Lakes Journal of Materials Science Letters, 15, 475-477 (1996). Abstract Material microstructures are presented which can exhibit coefficients

More information

Game Physics. Game and Media Technology Master Program - Utrecht University. Dr. Nicolas Pronost

Game Physics. Game and Media Technology Master Program - Utrecht University. Dr. Nicolas Pronost Game and Media Technology Master Program - Utrecht University Dr. Nicolas Pronost Soft body physics Soft bodies In reality, objects are not purely rigid for some it is a good approximation but if you hit

More information

Oscillatory flow of a jeffrey fluid in an elastic tube of variable cross-section

Oscillatory flow of a jeffrey fluid in an elastic tube of variable cross-section Available online at www.pelagiaresearchlibrary.com Advances in Applied Science Research 2012 3 (2):671-677 ISSN: 0976-8610 CODEN (USA): AASRFC Oscillatory flow of a jeffrey fluid in an elastic tube of

More information

Non-Linear Finite Element Methods in Solid Mechanics Attilio Frangi, Politecnico di Milano, February 17, 2017, Lesson 5

Non-Linear Finite Element Methods in Solid Mechanics Attilio Frangi, Politecnico di Milano, February 17, 2017, Lesson 5 Non-Linear Finite Element Methods in Solid Mechanics Attilio Frangi, attilio.frangi@polimi.it Politecnico di Milano, February 17, 2017, Lesson 5 1 Politecnico di Milano, February 17, 2017, Lesson 5 2 Outline

More information

Soft Bodies. Good approximation for hard ones. approximation breaks when objects break, or deform. Generalization: soft (deformable) bodies

Soft Bodies. Good approximation for hard ones. approximation breaks when objects break, or deform. Generalization: soft (deformable) bodies Soft-Body Physics Soft Bodies Realistic objects are not purely rigid. Good approximation for hard ones. approximation breaks when objects break, or deform. Generalization: soft (deformable) bodies Deformed

More information

On the Infusion of a Therapeutic Agent Into a Solid Tumor Modeled as a Poroelastic Medium

On the Infusion of a Therapeutic Agent Into a Solid Tumor Modeled as a Poroelastic Medium On the Infusion of a Therapeutic Agent Into a Solid Tumor Modeled as a Poroelastic Medium Alessandro Bottaro 1 e-mail: alessandro.bottaro@unige.it Tobias Ansaldi Research Center for Materials Science and

More information

Navier-Stokes Flow in Cylindrical Elastic Tubes

Navier-Stokes Flow in Cylindrical Elastic Tubes Navier-Stokes Flow in Cylindrical Elastic Tubes Taha Sochi University College London, Department of Physics & stronomy, Gower Street, London, WC1E 6BT Email: t.sochi@ucl.ac.uk. bstract nalytical expressions

More information

FEM model of pneumatic spring assembly

FEM model of pneumatic spring assembly FEM model of pneumatic spring assembly Tien Tran Xuan 1, David Cirkl 2 Department of Applied Mechanics, Faculty of Mechanical Engineering, Technical University of Liberec, Liberec, Czech Republic 1 Corresponding

More information

Chapter 7. Highlights:

Chapter 7. Highlights: Chapter 7 Highlights: 1. Understand the basic concepts of engineering stress and strain, yield strength, tensile strength, Young's(elastic) modulus, ductility, toughness, resilience, true stress and true

More information

Size Effects In the Crushing of Honeycomb Structures

Size Effects In the Crushing of Honeycomb Structures 45th AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics & Materials Conference 19-22 April 2004, Palm Springs, California AIAA 2004-1640 Size Effects In the Crushing of Honeycomb Structures Erik C.

More information

A Computational Model of Direct Interstitial Infusion of Macromolecules into the Spinal Cord

A Computational Model of Direct Interstitial Infusion of Macromolecules into the Spinal Cord Annals of Biomedical Engineering, Vol. 31, pp. 448 461, 2003 Printed in the USA. All rights reserved. 0090-6964/2003/31 4 /448/14/$20.00 Copyright 2003 Biomedical Engineering Society A Computational Model

More information

EXPERIMENTAL IDENTIFICATION OF HYPERELASTIC MATERIAL PARAMETERS FOR CALCULATIONS BY THE FINITE ELEMENT METHOD

EXPERIMENTAL IDENTIFICATION OF HYPERELASTIC MATERIAL PARAMETERS FOR CALCULATIONS BY THE FINITE ELEMENT METHOD Journal of KONES Powertrain and Transport, Vol. 7, No. EXPERIMENTAL IDENTIFICATION OF HYPERELASTIC MATERIAL PARAMETERS FOR CALCULATIONS BY THE FINITE ELEMENT METHOD Robert Czabanowski Wroclaw University

More information

COMSOL Used for Simulating Biological Remodelling

COMSOL Used for Simulating Biological Remodelling COMSOL Used for Simulating Biological Remodelling S. Di Stefano 1*, M. M. Knodel 1, K. Hashlamoun 2, S. Federico, A. Grillo 1 1. Department of Mathematical Sciences G. L. Lagrange, Politecnico di Torino,

More information

MATERIAL PROPERTIES. Material Properties Must Be Evaluated By Laboratory or Field Tests 1.1 INTRODUCTION 1.2 ANISOTROPIC MATERIALS

MATERIAL PROPERTIES. Material Properties Must Be Evaluated By Laboratory or Field Tests 1.1 INTRODUCTION 1.2 ANISOTROPIC MATERIALS . MARIAL PROPRIS Material Properties Must Be valuated By Laboratory or Field ests. INRODUCION he fundamental equations of structural mechanics can be placed in three categories[]. First, the stress-strain

More information

Mechanics PhD Preliminary Spring 2017

Mechanics PhD Preliminary Spring 2017 Mechanics PhD Preliminary Spring 2017 1. (10 points) Consider a body Ω that is assembled by gluing together two separate bodies along a flat interface. The normal vector to the interface is given by n

More information

A Constitutive Framework for the Numerical Analysis of Organic Soils and Directionally Dependent Materials

A Constitutive Framework for the Numerical Analysis of Organic Soils and Directionally Dependent Materials Dublin, October 2010 A Constitutive Framework for the Numerical Analysis of Organic Soils and Directionally Dependent Materials FracMan Technology Group Dr Mark Cottrell Presentation Outline Some Physical

More information

Advanced Simulation of Sealings CADFEM GmbH Rainer Rauch

Advanced Simulation of Sealings CADFEM GmbH Rainer Rauch Advanced Simulation of Sealings CADFEM GmbH Rainer Rauch Recent developments in ANSYS V12 for the simulation of sealings Element technology Material models Contact Robust design and optimization -1- New

More information

Predicting Articular Cartilage Behavior with a Non-Linear Microstructural Model

Predicting Articular Cartilage Behavior with a Non-Linear Microstructural Model The Open Mechanics Journal, 27, 1, 11-19 11 Predicting Articular Cartilage Behavior with a Non-Linear Microstructural Model Fulin Lei and Andras Z. Szeri * Center for Biomedical Engineering Research, Department

More information

Testing and Analysis

Testing and Analysis Testing and Analysis Testing Elastomers for Hyperelastic Material Models in Finite Element Analysis 2.6 2.4 2.2 2.0 1.8 1.6 1.4 Biaxial Extension Simple Tension Figure 1, A Typical Final Data Set for Input

More information

NIH Public Access Author Manuscript J Biomech. Author manuscript; available in PMC 2008 January 1.

NIH Public Access Author Manuscript J Biomech. Author manuscript; available in PMC 2008 January 1. NIH Public Access Author Manuscript Published in final edited form as: J Biomech. 2007 ; 40(9): 2071 2077. Three-dimensional Inhomogeneous Triphasic Finite Element Analysis of Physical Signals and Solute

More information

Nonlinear poroplastic model of ventricular dilation in hydrocephalus

Nonlinear poroplastic model of ventricular dilation in hydrocephalus J Neurosurg 109:100 107, 2008 Nonlinear poroplastic model of ventricular dilation in hydrocephalus Laboratory investigation SHAHAN MOMJIAN, M.D., 1 AND DENIS BICHSEL, PH.D. 2 1 Department of Clinical Neurosciences/Service

More information

COMPUTATIONAL STUDY OF PARTICLE/LIQUID FLOWS IN CURVED/COILED MEMBRANE SYSTEMS

COMPUTATIONAL STUDY OF PARTICLE/LIQUID FLOWS IN CURVED/COILED MEMBRANE SYSTEMS COMPUTATIONAL STUDY OF PARTICLE/LIQUID FLOWS IN CURVED/COILED MEMBRANE SYSTEMS Prashant Tiwari 1, Steven P. Antal 1,2, Michael Z. Podowski 1,2 * 1 Department of Mechanical, Aerospace and Nuclear Engineering,

More information

An Analytical Model for Long Tube Hydroforming in a Square Cross-Section Die Considering Anisotropic Effects of the Material

An Analytical Model for Long Tube Hydroforming in a Square Cross-Section Die Considering Anisotropic Effects of the Material Journal of Stress Analysis Vol. 1, No. 2, Autumn Winter 2016-17 An Analytical Model for Long Tube Hydroforming in a Square Cross-Section Die Considering Anisotropic Effects of the Material H. Haghighat,

More information

A Finite Element Model for Numerical Analysis of Sintering

A Finite Element Model for Numerical Analysis of Sintering A Finite Element Model for Numerical Analysis of Sintering DANIELA CÂRSTEA High-School Group of Railways, Craiova ION CÂRSTEA Department of Computer Engineering and Communication University of Craiova

More information

International Journal of Pure and Applied Mathematics Volume 58 No ,

International Journal of Pure and Applied Mathematics Volume 58 No , International Journal of Pure and Applied Mathematics Volume 58 No. 2 2010, 195-208 A NOTE ON THE LINEARIZED FINITE THEORY OF ELASTICITY Maria Luisa Tonon Department of Mathematics University of Turin

More information

Numerical Model of the Influence of Shear Stress on the Adaptation of a Blood Vessel BMT 03-35

Numerical Model of the Influence of Shear Stress on the Adaptation of a Blood Vessel BMT 03-35 Numerical Model of the Influence of Shear Stress on the Adaptation of a Blood Vessel BMT 03-35 Mirjam Yvonne van Leeuwen Supervisor: Dr. Ir. M.C.M. Rutten Ir. N.J.B. Driessen TUE Eindhoven, The Netherlands

More information

ARTICLE IN PRESS. Journal of Biomechanics

ARTICLE IN PRESS. Journal of Biomechanics Journal of Biomechanics 43 (2010) 673 679 Contents lists available at ScienceDirect Journal of Biomechanics journal homepage: www.elsevier.com/locate/jbiomech www.jbiomech.com A linearized formulation

More information

Constitutive Modeling of Biological Soft Tissues

Constitutive Modeling of Biological Soft Tissues Constitutive Modeling of Biological Soft Tissues Attila P. Nagy 1, David J. Benson 1, Vikas Kaul 2, Mark Palmer 2 1 Livermore Software Technology Corporation, Livermore, CA 94551, USA 2 Medtronic plc,

More information

Effects of Aging on the Mechanical Behavior of Human Arteries in Large Deformations

Effects of Aging on the Mechanical Behavior of Human Arteries in Large Deformations International Academic Institute for Science and Technology International Academic Journal of Science and Engineering Vol. 3, No. 5, 2016, pp. 57-67. ISSN 2454-3896 International Academic Journal of Science

More information

DESIGN OF A TRI-PHASIC BIOMECHANICAL MODEL DESCRIBING HEALTHY AND CANCEROUS TISSUE

DESIGN OF A TRI-PHASIC BIOMECHANICAL MODEL DESCRIBING HEALTHY AND CANCEROUS TISSUE THE PENNSYLVANIA STATE UNIVERSITY SCHREYER HONORS COLLEGE DEPARTMENT OF ENGINEERING SCIENCE AND MECHANICS DESIGN OF A TRI-PHASIC BIOMECHANICAL MODEL DESCRIBING HEALTHY AND CANCEROUS TISSUE KATHRYN I. BARBER

More information

Finite Element Method in Geotechnical Engineering

Finite Element Method in Geotechnical Engineering Finite Element Method in Geotechnical Engineering Short Course on + Dynamics Boulder, Colorado January 5-8, 2004 Stein Sture Professor of Civil Engineering University of Colorado at Boulder Contents Steps

More information

Frequently Asked Questions

Frequently Asked Questions Frequently Asked Questions Why do we have to make the assumption that plane sections plane? How about bars with non-axis symmetric cross section? The formulae derived look very similar to beam and axial

More information

Mathematical Model of Blood Flow in Carotid Bifurcation

Mathematical Model of Blood Flow in Carotid Bifurcation Excerpt from the Proceedings of the COMSOL Conference 2009 Milan Mathematical Model of Blood Flow in Carotid Bifurcation E. Muraca *,1, V. Gramigna 1, and G. Fragomeni 1 1 Department of Experimental Medicine

More information

Computer Modeling in Bioengineering

Computer Modeling in Bioengineering Computer Modeling in Bioengineering Theoretical Background, Examples and Software Milos Kojic Harvard School of Public Health, USA University of Kragujevac, Serbia University of Texas Health Science Center

More information

Understanding hydraulic fracture variability through a penny shaped crack model for pre-rupture faults

Understanding hydraulic fracture variability through a penny shaped crack model for pre-rupture faults Penny shaped crack model for pre-rupture faults Understanding hydraulic fracture variability through a penny shaped crack model for pre-rupture faults David Cho, Gary F. Margrave, Shawn Maxwell and Mark

More information

06 - kinematic equations kinematic equations

06 - kinematic equations kinematic equations 06 - - 06-1 continuum mechancis continuum mechanics is a branch of physics (specifically mechanics) that deals with continuous matter. the fact that matter is made of atoms and that it commonly has some

More information

NUMERICAL MODELING OF INSTABILITIES IN SAND

NUMERICAL MODELING OF INSTABILITIES IN SAND NUMERICAL MODELING OF INSTABILITIES IN SAND KIRK ELLISON March 14, 2008 Advisor: Jose Andrade Masters Defense Outline of Presentation Randomized porosity in FEM simulations Liquefaction in FEM simulations

More information

A direct evaluation of the Fabric Tensor in anisotropic porous media

A direct evaluation of the Fabric Tensor in anisotropic porous media A direct evaluation of the Fabric Tensor in anisotropic porous media Maria Cristina Pernice 1, Luciano Nunziante 1, Massimiliano Fraldi 1,2 1 Department of Structural Engineering, University of Naples

More information

Example-3. Title. Description. Cylindrical Hole in an Infinite Mohr-Coulomb Medium

Example-3. Title. Description. Cylindrical Hole in an Infinite Mohr-Coulomb Medium Example-3 Title Cylindrical Hole in an Infinite Mohr-Coulomb Medium Description The problem concerns the determination of stresses and displacements for the case of a cylindrical hole in an infinite elasto-plastic

More information

Stretching of a Prismatic Bar by its Own Weight

Stretching of a Prismatic Bar by its Own Weight 1 APES documentation (revision date: 12.03.10) Stretching of a Prismatic Bar by its Own Weight. This sample analysis is provided in order to illustrate the correct specification of the gravitational acceleration

More information

Elements of Rock Mechanics

Elements of Rock Mechanics Elements of Rock Mechanics Stress and strain Creep Constitutive equation Hooke's law Empirical relations Effects of porosity and fluids Anelasticity and viscoelasticity Reading: Shearer, 3 Stress Consider

More information

ENGN 2340 Final Project Report. Optimization of Mechanical Isotropy of Soft Network Material

ENGN 2340 Final Project Report. Optimization of Mechanical Isotropy of Soft Network Material ENGN 2340 Final Project Report Optimization of Mechanical Isotropy of Soft Network Material Enrui Zhang 12/15/2017 1. Introduction of the Problem This project deals with the stress-strain response of a

More information

EQUIVALENCE BETWEEN INSTANTANEOUS BIPHASIC AND INCOMPRESSIBLE ELASTIC MATERIAL RESPONSE. and Biomedical Engineering. Columbia University.

EQUIVALENCE BETWEEN INSTANTANEOUS BIPHASIC AND INCOMPRESSIBLE ELASTIC MATERIAL RESPONSE. and Biomedical Engineering. Columbia University. 1 1 1 1 1 1 1 1 0 1 EQUIVALENCE BETWEEN INSTANTANEOUS BIPHASIC AND INCOMPRESSIBLE ELASTIC MATERIAL RESPONSE Gerard A. Ateshian a, Benjamin J. Ellis b, Jeffrey A. Weiss b a Departments of Mechanical Engineering

More information

dynamics of f luids in porous media

dynamics of f luids in porous media dynamics of f luids in porous media Jacob Bear Department of Civil Engineering Technion Israel Institute of Technology, Haifa DOVER PUBLICATIONS, INC. New York Contents Preface xvii CHAPTER 1 Introduction

More information

Coalbed Methane Properties

Coalbed Methane Properties Coalbed Methane Properties Subtopics: Permeability-Pressure Relationship Coal Compressibility Matrix Shrinkage Seidle and Huitt Palmer and Mansoori Shi and Durucan Constant Exponent Permeability Incline

More information

Surface stress and relaxation in metals

Surface stress and relaxation in metals J. Phys.: Condens. Matter 12 (2000) 5541 5550. Printed in the UK PII: S0953-8984(00)11386-4 Surface stress and relaxation in metals P M Marcus, Xianghong Qian and Wolfgang Hübner IBM Research Center, Yorktown

More information

Towards a reliable characterisation of the mechanical behaviour of brain tissue: Materials Technology Institute, Eindhoven University of Technology,

Towards a reliable characterisation of the mechanical behaviour of brain tissue: Materials Technology Institute, Eindhoven University of Technology, Towards a reliable characterisation of the mechanical behaviour of brain tissue: the effects of post-mortem time and sample preparation. A. Garo 1, M. Hrapko, J. A. W. van Dommelen 2, G. W. M. Peters Materials

More information

XI. NANOMECHANICS OF GRAPHENE

XI. NANOMECHANICS OF GRAPHENE XI. NANOMECHANICS OF GRAPHENE Carbon is an element of extraordinary properties. The carbon-carbon bond possesses large magnitude cohesive strength through its covalent bonds. Elemental carbon appears in

More information

Constitutive Relations

Constitutive Relations Constitutive Relations Dr. Andri Andriyana Centre de Mise en Forme des Matériaux, CEMEF UMR CNRS 7635 École des Mines de Paris, 06904 Sophia Antipolis, France Spring, 2008 Outline Outline 1 Review of field

More information

UNLOADING OF AN ELASTIC-PLASTIC LOADED SPHERICAL CONTACT

UNLOADING OF AN ELASTIC-PLASTIC LOADED SPHERICAL CONTACT 2004 AIMETA International Tribology Conference, September 14-17, 2004, Rome, Italy UNLOADING OF AN ELASTIC-PLASTIC LOADED SPHERICAL CONTACT Yuri KLIGERMAN( ), Yuri Kadin( ), Izhak ETSION( ) Faculty of

More information

A Hydro-elastic Model of Hydrocephalus

A Hydro-elastic Model of Hydrocephalus Report no. 04/03 A Hydro-elastic Model of Hydrocephalus A. Smillie 1, I. Sobey 2 & Z. Molnar 3 We combine elements of poroelasticity and of fluid mechanics to construct a mathematical model of the human

More information