Neural Excitability in a Subcritical Hopf Oscillator with a Nonlinear Feedback

Size: px
Start display at page:

Download "Neural Excitability in a Subcritical Hopf Oscillator with a Nonlinear Feedback"

Transcription

1 Neural Excitability in a Subcritical Hopf Oscillator with a Nonlinear Feedback Gautam C Sethia and Abhijit Sen Institute for Plasma Research, Bhat, Gandhinagar , INDIA

2 Motivation Neural Excitability which is the property responsible for generation of action potentials in neurons is an active area of research. Our goal is to study the effect of time delayed feedback on a neural system.

3 What is Neural Excitability? A neuron is said to be excitable if a small perturbation away from a stable equilibrium state can result in a large excursion of its potential before returning to its original state. This phenomenon is known as spiking of neurons. If the system s activity alternates between a rest state and a state of repetitive spiking, the system is said to exhibit bursting behavior.

4 Bifurcations for Neural Excitability: These large excursion exist because the system is close to bifurcations from rest to oscillatory states. The two bifurcations responsible for this transition are: Saddle-Node bifurcation on a limit cycle and Hopf Bifurcation.

5 Bifurcations giving rise to Neural Excitability: Izhikevich Eugene M., Neural Excitability, Spiking and Bursting, Int. J. Bif. Chaos Vol. 10, No.6 (2000)

6 Bifurcations in Hodgkin-Huxley Model: The Hodgkin-Huxley model, as well as many other biophysical neuron models, has a typical bifurcation structure where, as the bifurcation parameter increases, stable and unstable limit cycles appear via fold limit cycle bifurcation. The latter shrinks down to the rest state and makes it loose its stability via subcritical Hopf bifurcation. A topological normal form of a subcritical Hopf bifurcation oscillator qualitatively illustrates the above features.

7 The Hodgkin-Huxley Model: Typical Bifurcation Structure Izhikevich Eugene M., Neural Excitability, Spiking and Bursting, Int. J. Bif. Chaos Vol. 10, No.6 (2000)

8 What do we study? We numerically study the dynamical properties of a normal form of subcritical Hopf oscillator (at the Hopf bifurcation point) subjected to a nonlinear time delayed feedback. We choose the non-linearity to be quadratic in nature. We further investigate the spiking/bursting properties of our model.

9 Why feedback and delay? We have introduced a quadratic nonlinear feedback which is the simplest and the lowest order nonlinearity that provides an excitable behavior in our model. The feedback is time delayed to account for finite propagation times of signals. The self-feedback term can mock up a variety of physical effects. In a collection of neurons, the term can be regarded as a source term representing the collective feedback due to the rest of the neurons.

10 AUTAPSE Neurons: A more direct and natural application could be in the modeling of autapse neurons (neurons with auto-synapses) where the feedback term can represent the phenomenon of signals looping back on the neuron through axons that close in on the neuron s own dendrites.

11 Normal form of a Bautin bifurcation oscillator is: z& ( t) where a b is β is = ( a the Hopf z the + i( ω + β z( t) = x + bifurcation parameter and bifurcation shear iy is parameter complex variable determinesthe supercritical( b < ( β determinesthe dependence of a 2 ) + b z( t) 2 z( t) 4 ) z( t) 0) or subcritical (b > 0) frequency on amplitude)

12 The Hopf Oscillator with time delayed nonlinear feedback: z& ( t) where k andτ is β = a = = ( i( ω + β z( t) -0.5for all simulations 0 is and the oscillator without the feedback is poised at subcritical the time b = 1 Hopf 2 ) + feedback delay z( t) so that the strength z( t) bifurcation point. 2 4 ) z( t) 2 kz (t τ)

13 Bifurcation diagrams as a function of the feedback strength k :

14 Two parameter bifurcation diagram in feedback strength (k) and the time delay τ :

15 Different type of possible bursting in a neural system near saddle-node separatrix loop bifurcation : (from Izhikevich 2000)

16 Different type of possible bursting in a neural system near Bautin bifurcation : (from Izhikevich 2000)

17 Saddle-Node on a Limit Cycle (SNLC) Bifurcation : The feedback strengths k= and respectively.

18 Typical trajectories: solid:τ=0; dash-dot: τ=0.5; dash: τ=0.57

19 The temporal response of the model to an external stimulus: z& ( t) 2 2 = ( i( ω + β z( t) ) + z( t) z( t) ) z( t) kz ( t e i Ω + ε t + 2Dξ ( t) 2 4 τ ) Where ε is the amplitude and Ω is the frequency of the external signal and ξ(t) is the zero mean Gaussian white noise with intensity D. The time period T of the external signal is 2π/Ω. Both the signal as well as the noise are subthreshold and thus do not give rise to spiking on their own.

20 What are ISIH, ISI and IMS? The Inter-Spike Interval Histogram (ISIH); in which the time intervals between successive spikes are assembled into a histogram, is found to be useful in characterizing the spiking pattern of a neuron. ISIH typically exhibit multimodal structure with peaks at integer multiples of a basic Inter-Spike Interval (ISI); a feature generally referred to as Integer Multiple Spiking (IMS).

21 A segment of a typical time series exhibiting spiking. The continuous trace is for τ=0 and the dashed trace is for τ=0.5 K=0.45, ε=0.04, D=0.004, Ω=0.1 (T 62.8) and β=-0.5

22 The interspike interval histograms (ISIHs) with delay (dashed curve) and without delay (solid curve):

23 The rate of change of phase (dφ/dt) as a function of phase (φ) near the bifurcation point :

24 Peak profile of an individual spike in the absence/presence of time delay :

25 t i e t kz t z t z t z t z i t z Ω = ε τ β ω ) ( ) ( ) ) ( ) ( ) ) ( ( ( ) ( & Simulation of bursting by adding an external stimulus to the model: where ε (=0.02) is the amplitude and Ω (=0.01) is the frequency of the external signal. The time period T of the external signal is 2π/Ω.

26 SNLC/SNLC (parabolic) bursting in the absence of delay:

27 SNLC/SNLC (parabolic) bursting with finite time delay (τ=0.3) but less than the threshold value :

28 SN/SSL (square wave) bursting in the presence of a large enough delay (τ=0.5) to be in the bistable region:

29 Conclusions: We have investigated the effect of time delay on the excitability properties of a single neuron with the help of a mathematical model consisting of subcritical Hopf oscillator with a nonlinear time delayed feedback. We find that time delay can have significant influence on the spiking properties of the neuron, such as in enhancing the frequency of spikes, triggering of multi-spikes (bursty behavior) and altering the fine structure of individual spikes.

30 Conclusions (contd.): All of this can have interesting practical implications in real biological systems. Our model neuron could also provide a useful paradigm for gaining more insight into the behavior of autapse neurons which are presently receiving a great deal of theoretical and experimental attention.

31 Conclusions about Bursting: The dynamics of our model is capable of exhibiting different types of bursting. A decrease in the feedback strength increases the number of spikes in a burst and also the width of the bursts. An increase in time delay also enhances the spike rate within a burst as well as the width of the bursts. The two parameter bifurcation diagram in k &τ space broadly explains the origin and characteristics of the different types of bursting activities.

32 Acknowledgements : We have made extensive use of the software packages XPPAUT (Bard Ermentrout) and DDE-BIFTOOL (K. Engelborghs, T. Luzyanina, and G. Samaey) for our studies.

33

Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting

Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting Eugene M. Izhikevich The MIT Press Cambridge, Massachusetts London, England Contents Preface xv 1 Introduction 1 1.1 Neurons

More information

Chapter 24 BIFURCATIONS

Chapter 24 BIFURCATIONS Chapter 24 BIFURCATIONS Abstract Keywords: Phase Portrait Fixed Point Saddle-Node Bifurcation Diagram Codimension-1 Hysteresis Hopf Bifurcation SNIC Page 1 24.1 Introduction In linear systems, responses

More information

Dynamical systems in neuroscience. Pacific Northwest Computational Neuroscience Connection October 1-2, 2010

Dynamical systems in neuroscience. Pacific Northwest Computational Neuroscience Connection October 1-2, 2010 Dynamical systems in neuroscience Pacific Northwest Computational Neuroscience Connection October 1-2, 2010 What do I mean by a dynamical system? Set of state variables Law that governs evolution of state

More information

Mathematical Analysis of Bursting Electrical Activity in Nerve and Endocrine Cells

Mathematical Analysis of Bursting Electrical Activity in Nerve and Endocrine Cells Mathematical Analysis of Bursting Electrical Activity in Nerve and Endocrine Cells Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University

More information

Phase Locking. 1 of of 10. The PRC's amplitude determines which frequencies a neuron locks to. The PRC's slope determines if locking is stable

Phase Locking. 1 of of 10. The PRC's amplitude determines which frequencies a neuron locks to. The PRC's slope determines if locking is stable Printed from the Mathematica Help Browser 1 1 of 10 Phase Locking A neuron phase-locks to a periodic input it spikes at a fixed delay [Izhikevich07]. The PRC's amplitude determines which frequencies a

More information

MANY scientists believe that pulse-coupled neural networks

MANY scientists believe that pulse-coupled neural networks IEEE TRANSACTIONS ON NEURAL NETWORKS, VOL. 10, NO. 3, MAY 1999 499 Class 1 Neural Excitability, Conventional Synapses, Weakly Connected Networks, and Mathematical Foundations of Pulse-Coupled Models Eugene

More information

Reduction of Conductance Based Models with Slow Synapses to Neural Nets

Reduction of Conductance Based Models with Slow Synapses to Neural Nets Reduction of Conductance Based Models with Slow Synapses to Neural Nets Bard Ermentrout October 1, 28 Abstract The method of averaging and a detailed bifurcation calculation are used to reduce a system

More information

Bursting and Chaotic Activities in the Nonlinear Dynamics of FitzHugh-Rinzel Neuron Model

Bursting and Chaotic Activities in the Nonlinear Dynamics of FitzHugh-Rinzel Neuron Model Bursting and Chaotic Activities in the Nonlinear Dynamics of FitzHugh-Rinzel Neuron Model Abhishek Yadav *#, Anurag Kumar Swami *, Ajay Srivastava * * Department of Electrical Engineering, College of Technology,

More information

Dynamical Systems in Neuroscience: Elementary Bifurcations

Dynamical Systems in Neuroscience: Elementary Bifurcations Dynamical Systems in Neuroscience: Elementary Bifurcations Foris Kuang May 2017 1 Contents 1 Introduction 3 2 Definitions 3 3 Hodgkin-Huxley Model 3 4 Morris-Lecar Model 4 5 Stability 5 5.1 Linear ODE..............................................

More information

Computational Neuroscience. Session 4-2

Computational Neuroscience. Session 4-2 Computational Neuroscience. Session 4-2 Dr. Marco A Roque Sol 06/21/2018 Two-Dimensional Two-Dimensional System In this section we will introduce methods of phase plane analysis of two-dimensional systems.

More information

An Introductory Course in Computational Neuroscience

An Introductory Course in Computational Neuroscience An Introductory Course in Computational Neuroscience Contents Series Foreword Acknowledgments Preface 1 Preliminary Material 1.1. Introduction 1.1.1 The Cell, the Circuit, and the Brain 1.1.2 Physics of

More information

Phase Response Properties and Phase-Locking in Neural Systems with Delayed Negative-Feedback. Carter L. Johnson

Phase Response Properties and Phase-Locking in Neural Systems with Delayed Negative-Feedback. Carter L. Johnson Phase Response Properties and Phase-Locking in Neural Systems with Delayed Negative-Feedback Carter L. Johnson Faculty Mentor: Professor Timothy J. Lewis University of California, Davis Abstract Oscillatory

More information

Synchronization and Phase Oscillators

Synchronization and Phase Oscillators 1 Synchronization and Phase Oscillators Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 Synchronization

More information

Canonical Neural Models 1

Canonical Neural Models 1 Canonical Neural Models 1 Frank Hoppensteadt 1 and Eugene zhikevich 2 ntroduction Mathematical modeling is a powerful tool in studying fundamental principles of information processing in the brain. Unfortunately,

More information

Mathematical Foundations of Neuroscience - Lecture 7. Bifurcations II.

Mathematical Foundations of Neuroscience - Lecture 7. Bifurcations II. Mathematical Foundations of Neuroscience - Lecture 7. Bifurcations II. Filip Piękniewski Faculty of Mathematics and Computer Science, Nicolaus Copernicus University, Toruń, Poland Winter 2009/2010 Filip

More information

Electrophysiology of the neuron

Electrophysiology of the neuron School of Mathematical Sciences G4TNS Theoretical Neuroscience Electrophysiology of the neuron Electrophysiology is the study of ionic currents and electrical activity in cells and tissues. The work of

More information

Krauskopf, B., Erzgraber, H., & Lenstra, D. (2006). Dynamics of semiconductor lasers with filtered optical feedback.

Krauskopf, B., Erzgraber, H., & Lenstra, D. (2006). Dynamics of semiconductor lasers with filtered optical feedback. Krauskopf, B, Erzgraber, H, & Lenstra, D (26) Dynamics of semiconductor lasers with filtered optical feedback Early version, also known as pre-print Link to publication record in Explore Bristol Research

More information

Time Delays in Neural Systems

Time Delays in Neural Systems Time Delays in Neural Systems Sue Ann Campbell 1 Department of Applied Mathematics, University of Waterloo, Waterloo ON N2l 3G1 Canada sacampbell@uwaterloo.ca Centre for Nonlinear Dynamics in Physiology

More information

Synchronization of Elliptic Bursters

Synchronization of Elliptic Bursters SIAM REVIEW Vol. 43,No. 2,pp. 315 344 c 2001 Society for Industrial and Applied Mathematics Synchronization of Elliptic Bursters Eugene M. Izhikevich Abstract. Periodic bursting behavior in neurons is

More information

A Mathematical Study of Electrical Bursting in Pituitary Cells

A Mathematical Study of Electrical Bursting in Pituitary Cells A Mathematical Study of Electrical Bursting in Pituitary Cells Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Collaborators on

More information

Chaos in the Hodgkin Huxley Model

Chaos in the Hodgkin Huxley Model SIAM J. APPLIED DYNAMICAL SYSTEMS Vol. 1, No. 1, pp. 105 114 c 2002 Society for Industrial and Applied Mathematics Chaos in the Hodgkin Huxley Model John Guckenheimer and Ricardo A. Oliva Abstract. The

More information

This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore.

This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore. This document is downloaded from DR-NTU, Nanyang Technological University Library, Singapore. Title Small-signal neural models and their applications Author(s) Basu, Arindam Citation Basu, A. (01). Small-signal

More information

Neural Modeling and Computational Neuroscience. Claudio Gallicchio

Neural Modeling and Computational Neuroscience. Claudio Gallicchio Neural Modeling and Computational Neuroscience Claudio Gallicchio 1 Neuroscience modeling 2 Introduction to basic aspects of brain computation Introduction to neurophysiology Neural modeling: Elements

More information

The homogeneous Poisson process

The homogeneous Poisson process The homogeneous Poisson process during very short time interval Δt there is a fixed probability of an event (spike) occurring independent of what happened previously if r is the rate of the Poisson process,

More information

Title. Author(s)Yanagita, T. CitationPhysical Review E, 76(5): Issue Date Doc URL. Rights. Type.

Title. Author(s)Yanagita, T. CitationPhysical Review E, 76(5): Issue Date Doc URL. Rights. Type. Title Input-output relation of FitzHugh-Nagumo elements ar Author(s)Yanagita, T. CitationPhysical Review E, 76(5): 5625--5625-3 Issue Date 27- Doc URL http://hdl.handle.net/25/32322 Rights Copyright 27

More information

University of Bristol - Explore Bristol Research. Early version, also known as pre-print

University of Bristol - Explore Bristol Research. Early version, also known as pre-print Erzgraber, H, Krauskopf, B, & Lenstra, D (2004) Compound laser modes of mutually delay-coupled lasers : bifurcation analysis of the locking region Early version, also known as pre-print Link to publication

More information

HSND-2015, IPR. Department of Physics, University of Burdwan, Burdwan, West Bengal.

HSND-2015, IPR. Department of Physics, University of Burdwan, Burdwan, West Bengal. New kind of deaths: Oscillation Death and Chimera Death HSND-2015, IPR Dr. Tanmoy Banerjee Department of Physics, University of Burdwan, Burdwan, West Bengal. Points to be discussed Oscillation suppression

More information

Computational Modeling of Neuronal Systems (Advanced Topics in Mathematical Physiology: G , G )

Computational Modeling of Neuronal Systems (Advanced Topics in Mathematical Physiology: G , G ) Computational Modeling of Neuronal Systems (Advanced Topics in Mathematical Physiology: G63.2855.001, G80.3042.004) Thursday, 9:30-11:20am, WWH Rm 1314. Prerequisites: familiarity with linear algebra,

More information

Please cite this article as:

Please cite this article as: Please cite this article as: Salvi J. D., Ó Maoiléidigh D., and Hudspeth A. J. (2016) Identification of bifurcations from observations of noisy biological oscillators. Biophysical Journal 111(4):798-812.

More information

Spontaneous voltage oscillations and response dynamics of a Hodgkin-Huxley type model of sensory hair cells

Spontaneous voltage oscillations and response dynamics of a Hodgkin-Huxley type model of sensory hair cells Journal of Mathematical Neuroscience (2011) 1:11 DOI 10.1186/2190-8567-1-11 RESEARCH OpenAccess Spontaneous voltage oscillations and response dynamics of a Hodgkin-Huxley type model of sensory hair cells

More information

Analysis of stochastic torus-type bursting in 3D neuron model

Analysis of stochastic torus-type bursting in 3D neuron model Analysis of stochastic torus-type bursting in 3D neuron model Lev B. Ryashko lev.ryashko@urfu.ru Evdokia S. Slepukhina evdokia.slepukhina@urfu.ru Ural Federal University (Yekaterinburg, Russia) Abstract

More information

Bifurcation examples in neuronal models

Bifurcation examples in neuronal models Bifurcation examples in neuronal models Romain Veltz / Olivier Faugeras October 15th 214 Outline Most figures from textbook of Izhikevich 1 Codim 1 bifurcations of equilibria 2 Codim 1 bifurcations of

More information

arxiv: v2 [physics.optics] 15 Dec 2016

arxiv: v2 [physics.optics] 15 Dec 2016 Bifurcation analysis of the Yamada model for a pulsing semiconductor laser with saturable absorber and delayed optical feedback Abstract Soizic Terrien 1, Bernd Krauskopf 1, Neil G.R. Broderick 2 arxiv:1610.06794v2

More information

Three ways of treating a linear delay differential equation

Three ways of treating a linear delay differential equation Proceedings of the 5th International Conference on Nonlinear Dynamics ND-KhPI2016 September 27-30, 2016, Kharkov, Ukraine Three ways of treating a linear delay differential equation Si Mohamed Sah 1 *,

More information

Lecture 10 : Neuronal Dynamics. Eileen Nugent

Lecture 10 : Neuronal Dynamics. Eileen Nugent Lecture 10 : Neuronal Dynamics Eileen Nugent Origin of the Cells Resting Membrane Potential: Nernst Equation, Donnan Equilbrium Action Potentials in the Nervous System Equivalent Electrical Circuits and

More information

Single neuron models. L. Pezard Aix-Marseille University

Single neuron models. L. Pezard Aix-Marseille University Single neuron models L. Pezard Aix-Marseille University Biophysics Biological neuron Biophysics Ionic currents Passive properties Active properties Typology of models Compartmental models Differential

More information

Single-Cell and Mean Field Neural Models

Single-Cell and Mean Field Neural Models 1 Single-Cell and Mean Field Neural Models Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 The neuron

More information

On the Dynamics of Delayed Neural Feedback Loops. Sebastian Brandt Department of Physics, Washington University in St. Louis

On the Dynamics of Delayed Neural Feedback Loops. Sebastian Brandt Department of Physics, Washington University in St. Louis On the Dynamics of Delayed Neural Feedback Loops Sebastian Brandt Department of Physics, Washington University in St. Louis Overview of Dissertation Chapter 2: S. F. Brandt, A. Pelster, and R. Wessel,

More information

Title. Author(s)Fujii, Hiroshi; Tsuda, Ichiro. CitationNeurocomputing, 58-60: Issue Date Doc URL. Type.

Title. Author(s)Fujii, Hiroshi; Tsuda, Ichiro. CitationNeurocomputing, 58-60: Issue Date Doc URL. Type. Title Neocortical gap junction-coupled interneuron systems exhibiting transient synchrony Author(s)Fujii, Hiroshi; Tsuda, Ichiro CitationNeurocomputing, 58-60: 151-157 Issue Date 2004-06 Doc URL http://hdl.handle.net/2115/8488

More information

Chapter 14 Three Ways of Treating a Linear Delay Differential Equation

Chapter 14 Three Ways of Treating a Linear Delay Differential Equation Chapter 14 Three Ways of Treating a Linear Delay Differential Equation Si Mohamed Sah and Richard H. Rand Abstract This work concerns the occurrence of Hopf bifurcations in delay differential equations

More information

Consider the following spike trains from two different neurons N1 and N2:

Consider the following spike trains from two different neurons N1 and N2: About synchrony and oscillations So far, our discussions have assumed that we are either observing a single neuron at a, or that neurons fire independent of each other. This assumption may be correct in

More information

as Hopf Bifurcations in Time-Delay Systems with Band-limited Feedback

as Hopf Bifurcations in Time-Delay Systems with Band-limited Feedback as Hopf Bifurcations in Time-Delay Systems with Band-limited Feedback Lucas Illing and Daniel J. Gauthier Department of Physics Center for Nonlinear and Complex Systems Duke University, North Carolina

More information

CHAPTER 1. Bifurcations in the Fast Dynamics of Neurons: Implications for Bursting

CHAPTER 1. Bifurcations in the Fast Dynamics of Neurons: Implications for Bursting CHAPTER 1 Bifurcations in the Fast Dynamics of Neurons: Implications for Bursting John Guckenheimer Mathematics Department, Cornell University Ithaca, NY 14853 Joseph H. Tien Center for Applied Mathematics,

More information

LIMIT CYCLE OSCILLATORS

LIMIT CYCLE OSCILLATORS MCB 137 EXCITABLE & OSCILLATORY SYSTEMS WINTER 2008 LIMIT CYCLE OSCILLATORS The Fitzhugh-Nagumo Equations The best example of an excitable phenomenon is the firing of a nerve: according to the Hodgkin

More information

B5.6 Nonlinear Systems

B5.6 Nonlinear Systems B5.6 Nonlinear Systems 5. Global Bifurcations, Homoclinic chaos, Melnikov s method Alain Goriely 2018 Mathematical Institute, University of Oxford Table of contents 1. Motivation 1.1 The problem 1.2 A

More information

Linearization of F-I Curves by Adaptation

Linearization of F-I Curves by Adaptation LETTER Communicated by Laurence Abbott Linearization of F-I Curves by Adaptation Bard Ermentrout Department of Mathematics, University of Pittsburgh, Pittsburgh, PA 15260, U.S.A. We show that negative

More information

COUPLED STOCHASTIC OSCILLATORS WITH DELAYS IN COUPLING. Ines B. Grozdanović Nikola I. Burić; Kristina D. Todorović and Nebojša T.

COUPLED STOCHASTIC OSCILLATORS WITH DELAYS IN COUPLING. Ines B. Grozdanović Nikola I. Burić; Kristina D. Todorović and Nebojša T. FACTA UNIVERSITATIS (NIŠ) Ser. Math. Inform. Vol. 27, No 1 (2012), 27 40 COUPLED STOCHASTIC OSCILLATORS WITH DELAYS IN COUPLING Ines B. Grozdanović Nikola I. Burić; Kristina D. Todorović and Nebojša T.

More information

John Rinzel, x83308, Courant Rm 521, CNS Rm 1005 Eero Simoncelli, x83938, CNS Rm 1030

John Rinzel, x83308, Courant Rm 521, CNS Rm 1005 Eero Simoncelli, x83938, CNS Rm 1030 Computational Modeling of Neuronal Systems (Advanced Topics in Mathematical Biology: G63.2852.001, G80.3042.001) Tuesday, 9:30-11:20am, WWH Rm 1314. Prerequisites: familiarity with linear algebra, applied

More information

arxiv: v1 [q-bio.nc] 9 Oct 2013

arxiv: v1 [q-bio.nc] 9 Oct 2013 1 arxiv:1310.2430v1 [q-bio.nc] 9 Oct 2013 Impact of adaptation currents on synchronization of coupled exponential integrate-and-fire neurons Josef Ladenbauer 1,2, Moritz Augustin 1, LieJune Shiau 3, Klaus

More information

Example of a Blue Sky Catastrophe

Example of a Blue Sky Catastrophe PUB:[SXG.TEMP]TRANS2913EL.PS 16-OCT-2001 11:08:53.21 SXG Page: 99 (1) Amer. Math. Soc. Transl. (2) Vol. 200, 2000 Example of a Blue Sky Catastrophe Nikolaĭ Gavrilov and Andrey Shilnikov To the memory of

More information

Numerical bifurcation analysis of delay differential equations

Numerical bifurcation analysis of delay differential equations Numerical bifurcation analysis of delay differential equations Dirk Roose Dept. of Computer Science K.U.Leuven Dirk.Roose@cs.kuleuven.be Acknowledgements Many thanks to Koen Engelborghs Tatyana Luzyanina

More information

6.3.4 Action potential

6.3.4 Action potential I ion C m C m dφ dt Figure 6.8: Electrical circuit model of the cell membrane. Normally, cells are net negative inside the cell which results in a non-zero resting membrane potential. The membrane potential

More information

Analytic Expressions for Rate and CV of a Type I Neuron Driven by White Gaussian Noise

Analytic Expressions for Rate and CV of a Type I Neuron Driven by White Gaussian Noise LETTER Communicated by Bard Ermentrout Analytic Expressions for Rate and CV of a Type I Neuron Driven by White Gaussian Noise Benjamin Lindner Lindner.Benjamin@science.uottawa.ca André Longtin alongtin@physics.uottawa.ca

More information

Neural Coding: Integrate-and-Fire Models of Single and Multi-Neuron Responses

Neural Coding: Integrate-and-Fire Models of Single and Multi-Neuron Responses Neural Coding: Integrate-and-Fire Models of Single and Multi-Neuron Responses Jonathan Pillow HHMI and NYU http://www.cns.nyu.edu/~pillow Oct 5, Course lecture: Computational Modeling of Neuronal Systems

More information

Problem Set Number 02, j/2.036j MIT (Fall 2018)

Problem Set Number 02, j/2.036j MIT (Fall 2018) Problem Set Number 0, 18.385j/.036j MIT (Fall 018) Rodolfo R. Rosales (MIT, Math. Dept., room -337, Cambridge, MA 0139) September 6, 018 Due October 4, 018. Turn it in (by 3PM) at the Math. Problem Set

More information

Introduction to bifurcations

Introduction to bifurcations Introduction to bifurcations Marc R. Roussel September 6, Introduction Most dynamical systems contain parameters in addition to variables. A general system of ordinary differential equations (ODEs) could

More information

Numerical techniques: Deterministic Dynamical Systems

Numerical techniques: Deterministic Dynamical Systems Numerical techniques: Deterministic Dynamical Systems Henk Dijkstra Institute for Marine and Atmospheric research Utrecht, Department of Physics and Astronomy, Utrecht, The Netherlands Transition behavior

More information

Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests

Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests Spike-Frequency Adaptation: Phenomenological Model and Experimental Tests J. Benda, M. Bethge, M. Hennig, K. Pawelzik & A.V.M. Herz February, 7 Abstract Spike-frequency adaptation is a common feature of

More information

Mathematical Modeling I

Mathematical Modeling I Mathematical Modeling I Dr. Zachariah Sinkala Department of Mathematical Sciences Middle Tennessee State University Murfreesboro Tennessee 37132, USA November 5, 2011 1d systems To understand more complex

More information

Frequency Adaptation and Bursting

Frequency Adaptation and Bursting BioE332A Lab 3, 2010 1 Lab 3 January 5, 2010 Frequency Adaptation and Bursting In the last lab, we explored spiking due to sodium channels. In this lab, we explore adaptation and bursting due to potassium

More information

Modelling biological oscillations

Modelling biological oscillations Modelling biological oscillations Shan He School for Computational Science University of Birmingham Module 06-23836: Computational Modelling with MATLAB Outline Outline of Topics Van der Pol equation Van

More information

Neuronal Dynamics: Computational Neuroscience of Single Neurons

Neuronal Dynamics: Computational Neuroscience of Single Neurons Week 4 part 5: Nonlinear Integrate-and-Fire Model 4.1 From Hodgkin-Huxley to 2D Neuronal Dynamics: Computational Neuroscience of Single Neurons Week 4 Recing detail: Two-dimensional neuron models Wulfram

More information

Strange Nonchaotic Spiking in the Quasiperiodically-forced Hodgkin-Huxley Neuron

Strange Nonchaotic Spiking in the Quasiperiodically-forced Hodgkin-Huxley Neuron Journal of the Korean Physical Society, Vol. 57, o. 1, July 2010, pp. 23 29 Strange onchaotic Spiking in the Quasiperiodically-forced Hodgkin-Huxley euron Woochang Lim and Sang-Yoon Kim Department of Physics,

More information

IN THIS turorial paper we exploit the relationship between

IN THIS turorial paper we exploit the relationship between 508 IEEE TRANSACTIONS ON NEURAL NETWORKS, VOL. 10, NO. 3, MAY 1999 Weakly Pulse-Coupled Oscillators, FM Interactions, Synchronization, Oscillatory Associative Memory Eugene M. Izhikevich Abstract We study

More information

Neuroscience applications: isochrons and isostables. Alexandre Mauroy (joint work with I. Mezic)

Neuroscience applications: isochrons and isostables. Alexandre Mauroy (joint work with I. Mezic) Neuroscience applications: isochrons and isostables Alexandre Mauroy (joint work with I. Mezic) Outline Isochrons and phase reduction of neurons Koopman operator and isochrons Isostables of excitable systems

More information

Nonlinear Dynamics of Neural Firing

Nonlinear Dynamics of Neural Firing Nonlinear Dynamics of Neural Firing BENG/BGGN 260 Neurodynamics University of California, San Diego Week 3 BENG/BGGN 260 Neurodynamics (UCSD) Nonlinear Dynamics of Neural Firing Week 3 1 / 16 Reading Materials

More information

Hybrid Integrate-and-Fire Model of a Bursting Neuron

Hybrid Integrate-and-Fire Model of a Bursting Neuron LETTER Communicated by John Rinzel Hybrid Integrate-and-Fire Model of a Bursting Neuron Barbara J. Breen bbreen@ece.gatech.edu William C. Gerken wgerken@ece.gatech.edu Robert J. Butera, Jr. rbutera@ece.gatech.edu

More information

Evaluating Bistability in a Mathematical Model of Circadian Pacemaker Neurons

Evaluating Bistability in a Mathematical Model of Circadian Pacemaker Neurons International Journal of Theoretical and Mathematical Physics 2016, 6(3): 99-103 DOI: 10.5923/j.ijtmp.20160603.02 Evaluating Bistability in a Mathematical Model of Circadian Pacemaker Neurons Takaaki Shirahata

More information

Communicated by John Rinzel

Communicated by John Rinzel ARTICLE Communicated by John Rinzel Dynamics of Membrane Excitability Determine Interspike Interval Variability: A Link Between Spike Generation Mechanisms and Cortical Spike Train Statistics Boris S.

More information

Lecture 11 : Simple Neuron Models. Dr Eileen Nugent

Lecture 11 : Simple Neuron Models. Dr Eileen Nugent Lecture 11 : Simple Neuron Models Dr Eileen Nugent Reading List Nelson, Biological Physics, Chapter 12 Phillips, PBoC, Chapter 17 Gerstner, Neuronal Dynamics: from single neurons to networks and models

More information

Phase Oscillators. and at r, Hence, the limit cycle at r = r is stable if and only if Λ (r ) < 0.

Phase Oscillators. and at r, Hence, the limit cycle at r = r is stable if and only if Λ (r ) < 0. 1 Phase Oscillators Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 2 Phase Oscillators Oscillations

More information

Bifurcation Analysis of Neuronal Bursters Models

Bifurcation Analysis of Neuronal Bursters Models Bifurcation Analysis of Neuronal Bursters Models B. Knowlton, W. McClure, N. Vu REU Final Presentation August 3, 2017 Overview Introduction Stability Bifurcations The Hindmarsh-Rose Model Our Contributions

More information

Effects of Noisy Drive on Rhythms in Networks of Excitatory and Inhibitory Neurons

Effects of Noisy Drive on Rhythms in Networks of Excitatory and Inhibitory Neurons Effects of Noisy Drive on Rhythms in Networks of Excitatory and Inhibitory Neurons Christoph Börgers 1 and Nancy Kopell 2 1 Department of Mathematics, Tufts University, Medford, MA 2155 2 Department of

More information

Stability and bifurcation of a simple neural network with multiple time delays.

Stability and bifurcation of a simple neural network with multiple time delays. Fields Institute Communications Volume, 999 Stability and bifurcation of a simple neural network with multiple time delays. Sue Ann Campbell Department of Applied Mathematics University of Waterloo Waterloo

More information

Nonlinear systems, chaos and control in Engineering

Nonlinear systems, chaos and control in Engineering Nonlinear systems, chaos and control in Engineering Module 1 block 3 One-dimensional nonlinear systems Cristina Masoller Cristina.masoller@upc.edu http://www.fisica.edu.uy/~cris/ Schedule Flows on the

More information

Analysis of burst dynamics bound by potential with active areas

Analysis of burst dynamics bound by potential with active areas NOLTA, IEICE Paper Analysis of burst dynamics bound by potential with active areas Koji Kurose 1a), Yoshihiro Hayakawa 2, Shigeo Sato 1, and Koji Nakajima 1 1 Laboratory for Brainware/Laboratory for Nanoelectronics

More information

CHAPTER 4 RELAXATION OSCILLATORS WITH TIME DELAY COUPLING

CHAPTER 4 RELAXATION OSCILLATORS WITH TIME DELAY COUPLING CHAPTER 4 RELAXATION OSCILLATORS WITH TIME DELAY COUPLING 4.1 Introduction Thus far we have studied synchronization in networks of locally coupled neurobiologically based oscillator models. One additional

More information

Models Involving Interactions between Predator and Prey Populations

Models Involving Interactions between Predator and Prey Populations Models Involving Interactions between Predator and Prey Populations Matthew Mitchell Georgia College and State University December 30, 2015 Abstract Predator-prey models are used to show the intricate

More information

A showcase of torus canards in neuronal bursters

A showcase of torus canards in neuronal bursters Journal of Mathematical Neuroscience (2012) 2:3 DOI 10.1186/2190-8567-2-3 RESEARCH OpenAccess A showcase of torus canards in neuronal bursters John Burke Mathieu Desroches Anna M Barry Tasso J Kaper Mark

More information

Coupling in Networks of Neuronal Oscillators. Carter Johnson

Coupling in Networks of Neuronal Oscillators. Carter Johnson Coupling in Networks of Neuronal Oscillators Carter Johnson June 15, 2015 1 Introduction Oscillators are ubiquitous in nature. From the pacemaker cells that keep our hearts beating to the predator-prey

More information

Stochastic Oscillator Death in Globally Coupled Neural Systems

Stochastic Oscillator Death in Globally Coupled Neural Systems Journal of the Korean Physical Society, Vol. 52, No. 6, June 2008, pp. 19131917 Stochastic Oscillator Death in Globally Coupled Neural Systems Woochang Lim and Sang-Yoon Kim y Department of Physics, Kangwon

More information

arxiv: v3 [physics.bio-ph] 26 May 2011

arxiv: v3 [physics.bio-ph] 26 May 2011 Bistability and resonance in the periodically stimulated Hodgkin-Huxley model with noise L. S. Borkowski Department of Physics, Adam Mickiewicz University, Umultowska 85, 61-614 Poznan, Poland arxiv:1012.3743v3

More information

Analysis of a lumped model of neocortex to study epileptiform ac

Analysis of a lumped model of neocortex to study epileptiform ac of a lumped model of neocortex to study epileptiform activity Sid Visser Hil Meijer Stephan van Gils March 21, 2012 What is epilepsy? Pathology Neurological disorder, affecting 1% of world population Characterized

More information

Interaction of Canard and Singular Hopf Mechanisms in a Neural Model

Interaction of Canard and Singular Hopf Mechanisms in a Neural Model SIAM J. APPLIED DYNAMICAL SYSTEMS Vol. 0, No. 4, pp. 443 479 c 0 Society for Industrial and Applied Mathematics Interaction of Canard and Singular Hopf Mechanisms in a Neural Model R. Curtu and J. Rubin

More information

Dynamical modelling of systems of coupled oscillators

Dynamical modelling of systems of coupled oscillators Dynamical modelling of systems of coupled oscillators Mathematical Neuroscience Network Training Workshop Edinburgh Peter Ashwin University of Exeter 22nd March 2009 Peter Ashwin (University of Exeter)

More information

From neuronal oscillations to complexity

From neuronal oscillations to complexity 1/39 The Fourth International Workshop on Advanced Computation for Engineering Applications (ACEA 2008) MACIS 2 Al-Balqa Applied University, Salt, Jordan Corson Nathalie, Aziz Alaoui M.A. University of

More information

OPTIMAL INPUTS FOR PHASE MODELS OF SPIKING NEURONS

OPTIMAL INPUTS FOR PHASE MODELS OF SPIKING NEURONS Proceedings of,,, OPTIMAL INPUTS FOR PHASE MODELS OF SPIKING NEURONS Jeff Moehlis Dept. of Mechanical Engineering University of California, Santa Barbara Santa Barbara, CA 936 Email: moehlis@engineering.ucsb.edu

More information

Nonlinear dynamics vs Neuronal Dynamics

Nonlinear dynamics vs Neuronal Dynamics Nonlinear dynamics vs Neuronal Dynamics Cours de Methodes Mathematiques en Neurosciences Brain and neuronal biological features Neuro-Computationnal properties of neurons Neuron Models and Dynamical Systems

More information

Influence of Criticality on 1/f α Spectral Characteristics of Cortical Neuron Populations

Influence of Criticality on 1/f α Spectral Characteristics of Cortical Neuron Populations Influence of Criticality on 1/f α Spectral Characteristics of Cortical Neuron Populations Robert Kozma rkozma@memphis.edu Computational Neurodynamics Laboratory, Department of Computer Science 373 Dunn

More information

Dynamics of Two Coupled van der Pol Oscillators with Delay Coupling Revisited

Dynamics of Two Coupled van der Pol Oscillators with Delay Coupling Revisited Dynamics of Two Coupled van der Pol Oscillators with Delay Coupling Revisited arxiv:1705.03100v1 [math.ds] 8 May 017 Mark Gluzman Center for Applied Mathematics Cornell University and Richard Rand Dept.

More information

The selection of mixed-mode oscillations in a Hodgkin-Huxley model with multiple timescales

The selection of mixed-mode oscillations in a Hodgkin-Huxley model with multiple timescales CHAOS 18, 015105 2008 The selection of mixed-mode oscillations in a Hodgkin-Huxley model with multiple timescales Jonathan Rubin Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania

More information

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring

Basic elements of neuroelectronics -- membranes -- ion channels -- wiring Computing in carbon Basic elements of neuroelectronics -- membranes -- ion channels -- wiring Elementary neuron models -- conductance based -- modelers alternatives Wires -- signal propagation -- processing

More information

Received 15 October 2004

Received 15 October 2004 Brief Review Modern Physics Letters B, Vol. 18, No. 23 (2004) 1135 1155 c World Scientific Publishing Company COUPLING AND FEEDBACK EFFECTS IN EXCITABLE SYSTEMS: ANTICIPATED SYNCHRONIZATION MARZENA CISZAK,,

More information

arxiv:q-bio/ v1 [q-bio.sc] 11 Jan 2006

arxiv:q-bio/ v1 [q-bio.sc] 11 Jan 2006 arxiv:q-bio/0601013v1 [q-bio.sc] 11 Jan 2006 Effect of channel block on the spiking activity of excitable membranes in a stochastic Hodgkin-Huxley model G. Schmid, I. Goychuk and P. Hänggi Institut für

More information

Determining the contributions of divisive and subtractive feedback in the Hodgkin-Huxley model

Determining the contributions of divisive and subtractive feedback in the Hodgkin-Huxley model JComputNeurosci(2014)37:403 415 DOI 10.1007/s10827-014-0511-y Determining the contributions of divisive and subtractive feedback in the Hodgkin-Huxley model Sevgi Şengül & Robert Clewley & Richard Bertram

More information

= F ( x; µ) (1) where x is a 2-dimensional vector, µ is a parameter, and F :

= F ( x; µ) (1) where x is a 2-dimensional vector, µ is a parameter, and F : 1 Bifurcations Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 A bifurcation is a qualitative change

More information

Magnetic waves in a two-component model of galactic dynamo: metastability and stochastic generation

Magnetic waves in a two-component model of galactic dynamo: metastability and stochastic generation Center for Turbulence Research Annual Research Briefs 006 363 Magnetic waves in a two-component model of galactic dynamo: metastability and stochastic generation By S. Fedotov AND S. Abarzhi 1. Motivation

More information

Phase Response Curves, Delays and Synchronization in Matlab

Phase Response Curves, Delays and Synchronization in Matlab Phase Response Curves, Delays and Synchronization in Matlab W. Govaerts and B. Sautois Department of Applied Mathematics and Computer Science, Ghent University, Krijgslaan 281-S9, B-9000 Ghent, Belgium

More information

Spatially Localized Synchronous Oscillations in Synaptically Coupled Neuronal Networks: Conductance-based Models and Discrete Maps

Spatially Localized Synchronous Oscillations in Synaptically Coupled Neuronal Networks: Conductance-based Models and Discrete Maps SIAM J. APPLIED DYNAMICAL SYSTEMS Vol. 9, No. 3, pp. 1019 1060 c 2010 Society for Industrial and Applied Mathematics Spatially Localized Synchronous Oscillations in Synaptically Coupled Neuronal Networks:

More information

MEMBRANE POTENTIALS AND ACTION POTENTIALS:

MEMBRANE POTENTIALS AND ACTION POTENTIALS: University of Jordan Faculty of Medicine Department of Physiology & Biochemistry Medical students, 2017/2018 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Review: Membrane physiology

More information