Introduction to Theories of Chemical Reactions. Graduate Course Seminar Beate Flemmig FHI

Size: px
Start display at page:

Download "Introduction to Theories of Chemical Reactions. Graduate Course Seminar Beate Flemmig FHI"

Transcription

1 Introduction to Theories of Chemical Reactions Graduate Course Seminar Beate Flemmig FHI

2 I. Overview What kind of reactions? gas phase / surface unimolecular / bimolecular thermal / photochemical

3 What kind of information? structure of reactants, products ΔE react mechanism TS, E a k τ, lifetime of intermediates

4 What kind of theoretical approach? MO and VB theory almost without calculation, based on symmetry arguments Quantum Chemistry Born-Oppenheimer approximation solution of electronic Schrödinger equation optimization of stationary points of PES follow IRC TD data TS theory

5 Molecular Dynamics semiempirical potential or calculation of forces on the fly (CPMD) T 0 beyond BO (wave-packet dynamics) more than one PES (photochemistry!) solution of nuclear SE real-time evolution of a chemical reaction related to pump-probe spectroscopy or femtosecond chemistry statistical mechanics many particles

6 An attempt to summarize the approaches a: number of particles x: electronic coordinates X: nuclear coordinates t: time R. Daudel, Quantum Chemistry, John Wiley, p. 299

7 II. Example Reaction: Chelate Ring Inversion Organometallics, 22 (2003) 1196.

8 experimentally ΔE a 62 kj/mol from 1 H NMR H. Köpf, Angew. Chem. 83, , (1971) Δν between signals of H at the two C 5 H 5 -rings k(t C ) = π 2 Δν approximate formula coalescence temp. T C (~ 20 ºC) k(t C ) = RT C N A h e ΔE a RT C M. Hesse, H. Meier, B. Zeeh Spektroskopische Methoden in der organischen Chemie Thieme Verlag 1991

9 Lewis structure Stabilizing and destabilizing effects of folding

10 III. Application of MO Theory Ring opening and closing of ozone - A forbidden reaction

11 molecular plane σ preserved in the reaction levels of MOs with different symmetry w. r. t. σ are crossing

12 computed* kinetic persistence of the cyclic isomer * K. Ruedenberg et al. J. Chem. Phys. (1991)

13 life time of the intermediate k = Ae E a RT Arrhenius equation τ ~ 1 k

14 unimolecular reaction first-order rate law d x d t = k c 0 x [ ] ln c 0 c 0 x = kt x := 1 2 c 0 t :=τ half-life time τ = ln2k 1

15 Fill in numbers assume preexponential factor of s -1 (unimolecular reaction) calculated barrier 23 kcal/mol = 95.7 kj/mol (the lower one) room temperature 25ºC k = Ae E a RT k =10 15 s 1 e kJmol 8.31JK 1 mol 1 298K k = s -1 τ = ln2k 1 τ = 44 s

16 Use cyclic ozone as a ligand 6 π electron donor

17 Some Predicted Complexes applied an 18-electron strategy Transition Metal Complexes of Cyclic and Open Ozone and Thiozone Flemmig, B.; Wolczanski, P. T.; Hoffmann, R. J. Am. Chem. Soc ASAP Article

18 Woodward - Hoffmann Rules to explain stereoselectivity of cycloadditions

19 different symmetry elements remain, depending on the mechanism

20 correlation diagram: level-crossing for disrotatory path see also: R. Hoffmann, Angew. Chem. Int. Ed. (2004) 43,

21 coefficients of Hückel solutions (π systems) correspond to particle-in-abox solutions

22 VB-Theory S. Shaik, A. Shurki, Angew. Chem. Int. Ed. (1999) 38,

23 IV. Application of Quantum Chemistry use Born-Oppenheimer approximation and solve the electronic Schrödinger equation (for fixed R)

24 ideally: determine electronic properties as functions of nuclear coordinates - i. e. determine the PES Potential Energy Surface, PES: governs nuclear motion, forces on the nuclei F x = - E/ x stationary points correspond to (meta)stable species (local or global minima) and to transition states (saddle points) shape of PES around stationary points determines vibrational spectra electronic transitions correspond to transitions from one PES to another minimum energy path corresponds to reaction coordinate

25 in reality: Calculated PES only available for very small systems, for example H+H2 in colinear arrangement without Coulomb interactions with Coulomb interactions H. Eyring, M. Polanyi, 1931 M. Karplus et al. 1968

26 in practice: stationary points of PES, their characterization (frequency calculations), and maybe the reaction path (IRC calculation)

27 Transition State Theory Eyring equation H. Eyring, J. Chem. Phys. (1935) 3, 107 k = k b T h Q TS Q R e E a k b T partition function Q = g j levels ε vib = n e ε j k b T hν

28 Example: Study of a Radical Clock Rearrangement on a Surface FTIR: ring modes at1393 cm -1 and 1434 cm -1 vanish and C=C stretch mode emerges at 1645 cm -1 C. M. Friend, I. Kretzschmar, JACS (2000)

29 Cyclopropylmethoxide and 3-butenyloxide on Mo(110) ΔEtotal = 31 kj/mol Flemmig, B.; Kretzschmar, I.; Friend, C. M.; Hoffmann, R. J. Phys. Chem. A. 2004; 108(15)

30 Alternative mechanisms already for the isolated molecule

31

32 Which is the rate-determining step? the one with the highest activation energy (not the one with the highest barrier) see also: H. Eyring et al. The Theory of Rate Processes, McGraw Hill, New York 1941.

33 V. Molecular Dynamics nuclei have kinetic energy T K > 0 H = T K + U T K = 1 2 P I 2 M I U : T e (r) + V ek (r,r) + V ee (r) + V KK (R) P I : classical momentum classical equations of motion H R I = P I H P I = R I solutions R I (t) and P I (t) are the trajectories of the nuclei

34 VI. Wave-Packet Dynamics treat also the nuclei quantum-mechanically HΦ(R,t) = ih t Φ(R,t) H = T K + U + [H extern ] T K = h2 2 2 M I simulations only for intervals of a few picoseconds very fast reactions: e.g. laser-induced isomerizations

35 ϕ R R

36 References/Acknowledgement C. Engler (Uni Leipzig) Überblick über die Näherungshierarchie und Lösungsansätze in der Quantentheorie, Graduate Course H.-J. Werner (Uni Stuttgart) Computational Chemistry in Catalysis, Graduate Course R. Hoffmann (Cornell) Bonding in Molecules, CHEM798 W. J. Moore, D. O. Hummel, Physikalische Chemie, de Gruyter Berlin 1986.

37

5.62 Physical Chemistry II Spring 2008

5.62 Physical Chemistry II Spring 2008 MIT OpenCourseWare http://ocw.mit.edu 5.62 Physical Chemistry II Spring 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms. 5.62 Spring 2007 Lecture

More information

Foundations of Chemical Kinetics. Lecture 12: Transition-state theory: The thermodynamic formalism

Foundations of Chemical Kinetics. Lecture 12: Transition-state theory: The thermodynamic formalism Foundations of Chemical Kinetics Lecture 12: Transition-state theory: The thermodynamic formalism Marc R. Roussel Department of Chemistry and Biochemistry Breaking it down We can break down an elementary

More information

Nuclear magnetic resonance spectroscopy

Nuclear magnetic resonance spectroscopy nuclear spin transitions O Nuclear magnetic resonance spectroscopy 1 H, 13 C, 2-dimensional which transitions? wavelength and intensity; ppm what happens if we change the environment of the nucleus? substituent

More information

Advanced Physical Chemistry CHAPTER 18 ELEMENTARY CHEMICAL KINETICS

Advanced Physical Chemistry CHAPTER 18 ELEMENTARY CHEMICAL KINETICS Experimental Kinetics and Gas Phase Reactions Advanced Physical Chemistry CHAPTER 18 ELEMENTARY CHEMICAL KINETICS Professor Angelo R. Rossi http://homepages.uconn.edu/rossi Department of Chemistry, Room

More information

Reaction Mechanisms Dependence of rate on temperature Activation Energy E a Activated Complex Arrhenius Equation

Reaction Mechanisms Dependence of rate on temperature Activation Energy E a Activated Complex Arrhenius Equation Kinetics Dependence of rate on Concentration (RATE LAW) Reaction Mechanisms Dependence of rate on temperature Activation Energy E a Activated Complex Arrhenius Equation Mary J. Bojan Chem 112 1 A MECHANISM

More information

Chapter 13 - Chemical Kinetics II. Integrated Rate Laws Reaction Rates and Temperature

Chapter 13 - Chemical Kinetics II. Integrated Rate Laws Reaction Rates and Temperature Chapter 13 - Chemical Kinetics II Integrated Rate Laws Reaction Rates and Temperature Reaction Order - Graphical Picture A ->Products Integrated Rate Laws Zero Order Reactions Rate = k[a] 0 = k (constant

More information

Advanced class Kinetics and Reaction Dynamics

Advanced class Kinetics and Reaction Dynamics Advanced class Kinetics and Reaction Dynamics Q1. Advanced Physical Chemistry 1998, Q9 Explain each of the following concepts in collision dynamics: i) impact parameter centrifugal barrier i total cross

More information

Chemical Kinetics. Rate = [B] t. Rate = [A] t. Chapter 12. Reaction Rates 01. Reaction Rates 02. Reaction Rates 03

Chemical Kinetics. Rate = [B] t. Rate = [A] t. Chapter 12. Reaction Rates 01. Reaction Rates 02. Reaction Rates 03 Chapter Chemical Kinetics Reaction Rates 0 Reaction Rate: The change in the concentration of a reactant or a product with time (M/s). Reactant Products aa bb Rate = [A] t Rate = [B] t Reaction Rates 0

More information

AP Chemistry - Notes - Chapter 12 - Kinetics Page 1 of 7 Chapter 12 outline : Chemical kinetics

AP Chemistry - Notes - Chapter 12 - Kinetics Page 1 of 7 Chapter 12 outline : Chemical kinetics AP Chemistry - Notes - Chapter 12 - Kinetics Page 1 of 7 Chapter 12 outline : Chemical kinetics A. Chemical Kinetics - chemistry of reaction rates 1. Reaction Rates a. Reaction rate- the change in concentration

More information

Chemistry 1B Fall 2016

Chemistry 1B Fall 2016 Chemistry 1B Fall 2016 Topic 23 [more] Chemical Kinetics 1 goals for topic 23 kinetics and mechanism of chemical reaction energy profile and reaction coordinate activation energy and temperature dependence

More information

CHEM3023: Spins, Atoms and Molecules

CHEM3023: Spins, Atoms and Molecules CHEM3023: Spins, Atoms and Molecules Lecture 3 The Born-Oppenheimer approximation C.-K. Skylaris Learning outcomes Separate molecular Hamiltonians to electronic and nuclear parts according to the Born-Oppenheimer

More information

[ A] 2. [ A] 2 = 2k dt. [ A] o

[ A] 2. [ A] 2 = 2k dt. [ A] o Chemistry 360 Dr Jean M Standard Problem Set 3 Solutions The reaction 2A P follows second-order kinetics The rate constant for the reaction is k350 0 4 Lmol s Determine the time required for the concentration

More information

What s the correct classical force on the nuclei

What s the correct classical force on the nuclei What s the correct classical force on the nuclei E.K.U. Gross Max-Planck Institute of Microstructure Physics Halle (Saale) What s the correct classical force on the nuclei or: How to make the Born-Oppenheimer

More information

Figure 1: Transition State, Saddle Point, Reaction Pathway

Figure 1: Transition State, Saddle Point, Reaction Pathway Computational Chemistry Workshops West Ridge Research Building-UAF Campus 9:00am-4:00pm, Room 009 Electronic Structure - July 19-21, 2016 Molecular Dynamics - July 26-28, 2016 Potential Energy Surfaces

More information

What is the course about?

What is the course about? What is the course about? Part 1 Organic Chemistry: organocatalysis 10-10 (1 Å) - 10-9 m Part 2 Structural Biology: peptide conformations Part 3 10-9 - 10-8 m Photochemistry and Photobiology: olefins &

More information

Elementary Reactions

Elementary Reactions Elementary Reactions Elementary reactions occur in a single encounter Unimolecular: A Rate = k[a] Bimolecular: A + B Rate = k[a][b] Termolecular: A + B + C Rate = k[a][b][c] Termolecular reactions are

More information

Chem 442 Review for Exam 2. Exact separation of the Hamiltonian of a hydrogenic atom into center-of-mass (3D) and relative (3D) components.

Chem 442 Review for Exam 2. Exact separation of the Hamiltonian of a hydrogenic atom into center-of-mass (3D) and relative (3D) components. Chem 44 Review for Exam Hydrogenic atoms: The Coulomb energy between two point charges Ze and e: V r Ze r Exact separation of the Hamiltonian of a hydrogenic atom into center-of-mass (3D) and relative

More information

Chemical Kinetics. Chapter 13. Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display.

Chemical Kinetics. Chapter 13. Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chemical Kinetics Chapter 13 Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chemical Kinetics Thermodynamics does a reaction take place? Kinetics how fast does

More information

The Potential Energy Surface

The Potential Energy Surface The Potential Energy Surface In this section we will explore the information that can be obtained by solving the Schrödinger equation for a molecule, or series of molecules. Of course, the accuracy of

More information

CHAPTER 21: Reaction Dynamics

CHAPTER 21: Reaction Dynamics CHAPTER 21: Reaction Dynamics I. Microscopic Theories of the Rate Constant. A. The Reaction Profile (Potential Energy diagram): Highly schematic and generalized. A---B-C B. Collision Theory of Bimolecular

More information

Exact factorization of the electron-nuclear wave function and the concept of exact forces in MD

Exact factorization of the electron-nuclear wave function and the concept of exact forces in MD Exact factorization of the electron-nuclear wave function and the concept of exact forces in MD E.K.U. Gross Max-Planck Institute for Microstructure Physics Halle (Saale) OUTLINE Thanks Exact factorisation

More information

Density Functional Theory Study on Mechanism of Forming Spiro-Geheterocyclic Ring Compound from Me 2 Ge=Ge: and Acetaldehyde

Density Functional Theory Study on Mechanism of Forming Spiro-Geheterocyclic Ring Compound from Me 2 Ge=Ge: and Acetaldehyde CHINESE JURNAL F CHEMICAL PHYSICS VLUME 26, NUMBER 1 FEBRUARY 27, 2013 ARTICLE Density Functional Theory Study on Mechanism of Forming Spiro-Geheterocyclic Ring Compound from Me 2 Ge=Ge: and Acetaldehyde

More information

CHEM Chemical Kinetics. & Transition State Theory

CHEM Chemical Kinetics. & Transition State Theory Chemical Kinetics Collision Theory Collision Theory & Transition State Theory The rate of reaction is markedly affected by temperature. k versus T Ae E a k RT Two theories were developed to explain the

More information

What dictates the rate of radiative or nonradiative excited state decay?

What dictates the rate of radiative or nonradiative excited state decay? What dictates the rate of radiative or nonradiative excited state decay? Transitions are faster when there is minimum quantum mechanical reorganization of wavefunctions. This reorganization energy includes

More information

Chemical Kinetics Ch t ap 1 er

Chemical Kinetics Ch t ap 1 er Chemical Kinetics Chapter 13 1 Chemical Kinetics Thermodynamics does a reaction take place? Kinetics how fast does a reaction proceed? Reaction rate is the change in the concentration of a reactant or

More information

with increased Lecture Summary #33 Wednesday, December 3, 2014

with increased Lecture Summary #33 Wednesday, December 3, 2014 5. Lecture Summary #33 Wednesday, December 3, 204 Reading for Today: 4.-4.3 in 5 th ed and 3.-3.3 in 4 th ed Reading for Lecture #34: 4.4 & 4.6 in 5 th ed and 3.4 & 3.6 in 4 th ed Topic: Kinetics I. Effect

More information

Chapter 6. A Qualitative Theory of Molecular Organic Photochemistry

Chapter 6. A Qualitative Theory of Molecular Organic Photochemistry Chapter 6. A Qualitative Theory of Molecular Organic Photochemistry 6.1 Introduction to a Theory of Organic Photoreactions A organic reaction mechanism is usually considered to be a sequence of the critical

More information

Models for Time-Dependent Phenomena

Models for Time-Dependent Phenomena Models for Time-Dependent Phenomena I. Phenomena in laser-matter interaction: atoms II. Phenomena in laser-matter interaction: molecules III. Model systems and TDDFT Manfred Lein p.1 Outline Phenomena

More information

Electrocyclic Reactions

Electrocyclic Reactions Farzana Latif Ansari, Rumana Qureshi, Masood Latif Qureshi Electrocyclic Reactions From Fundamentals to Research WILEY-VCH Weinheim New York Chichester Brisbane Singapore Toronto Preface Acknowledgements

More information

The Potential Energy Surface (PES) Preamble to the Basic Force Field Chem 4021/8021 Video II.i

The Potential Energy Surface (PES) Preamble to the Basic Force Field Chem 4021/8021 Video II.i The Potential Energy Surface (PES) Preamble to the Basic Force Field Chem 4021/8021 Video II.i The Potential Energy Surface Captures the idea that each structure that is, geometry has associated with it

More information

Energy Profiles and Chemical Reactions

Energy Profiles and Chemical Reactions Energy rofiles and Chemical eactions + B C D E egensburg er-la Norrby Modeling Kinetics Molecular Modeling Stationary points Energies Barriers eaction rates DFT, ab initio, MM Ground & Transition states

More information

Reaction Mechanisms. Chemical Kinetics. Reaction Mechanisms. Reaction Mechanisms. Reaction Mechanisms. Reaction Mechanisms

Reaction Mechanisms. Chemical Kinetics. Reaction Mechanisms. Reaction Mechanisms. Reaction Mechanisms. Reaction Mechanisms Chemical Kinetics Kinetics is a study of the rate at which a chemical reaction occurs. The study of kinetics may be done in steps: Determination of reaction mechanism Prediction of rate law Measurement

More information

Kinetic Isotope Effects The Study of Organometallic Reaction Mechanisms

Kinetic Isotope Effects The Study of Organometallic Reaction Mechanisms Kinetic Isotope Effects The Study of Organometallic Reaction Mechanisms Alexander J. Kendall D.R. Tyler Group Meeting 7/23/2014 Gómez-Gallego, M.; Sierra, M. A. Chem. Rev. 2011, 111, 4857-4963. Outline

More information

Chapter 12. Chemical Kinetics

Chapter 12. Chemical Kinetics Chapter 12 Chemical Kinetics Chapter 12 Table of Contents 12.1 Reaction Rates 12.2 Rate Laws: An Introduction 12.3 Determining the Form of the Rate Law 12.4 The Integrated Rate Law 12.5 Reaction Mechanisms

More information

Ch 13 Rates of Reaction (Chemical Kinetics)

Ch 13 Rates of Reaction (Chemical Kinetics) Ch 13 Rates of Reaction (Chemical Kinetics) Reaction Rates and Kinetics - The reaction rate is how fast reactants are converted to products. - Chemical kinetics is the study of reaction rates. Kinetics

More information

ENZYME SCIENCE AND ENGINEERING PROF. SUBHASH CHAND DEPARTMENT OF BIOCHEMICAL ENGINEERING AND BIOTECHNOLOGY IIT DELHI LECTURE 3

ENZYME SCIENCE AND ENGINEERING PROF. SUBHASH CHAND DEPARTMENT OF BIOCHEMICAL ENGINEERING AND BIOTECHNOLOGY IIT DELHI LECTURE 3 ENZYME SCIENCE AND ENGINEERING PROF. SUBHASH CHAND DEPARTMENT OF BIOCHEMICAL ENGINEERING AND BIOTECHNOLOGY IIT DELHI LECTURE 3 ENZYMES AS BIOCATALYSTS * CATALYTIC EFFICIENCY *SPECIFICITY Having discussed

More information

Lecture 9-10 January 25-27, 2012 Rules for Chem. React. - Woodward-Hoffmann

Lecture 9-10 January 25-27, 2012 Rules for Chem. React. - Woodward-Hoffmann Lecture 9-10 January 25-27, 2012 Rules for Chem. React. - Woodward-Hoffmann Nature of the Chemical Bond with applications to catalysis, materials science, nanotechnology, surface science, bioinorganic

More information

Light-powered autonomous and directional molecular motion of a dissipative self-assembling system

Light-powered autonomous and directional molecular motion of a dissipative self-assembling system SUPPLEMENTARY INFORMATION DOI: 10.1038/NNANO.2014.260 Light-powered autonomous and directional molecular motion of a dissipative self-assembling system Giulio Ragazzon, Massimo Baroncini, Serena Silvi,

More information

Kinetic modeling in heterogeneous catalysis.

Kinetic modeling in heterogeneous catalysis. Kinetic modeling in heterogeneous catalysis. C. Franklin Goldsmith Modern Methods in Heterogeneous Catalysis Research Friday, January 27 th, 2012 Microkinetic modeling is a valuable tool in catalysis.

More information

Thermodynamics and Kinetics

Thermodynamics and Kinetics Thermodynamics and Kinetics C. Paolucci University of Notre Dame Department of Chemical & Biomolecular Engineering What is the energy we calculated? You used GAMESS to calculate the internal (ground state)

More information

# ( 1) j=1. 1 Computer Experiment 5: Computational Thermochemistry. 1.1 Background:

# ( 1) j=1. 1 Computer Experiment 5: Computational Thermochemistry. 1.1 Background: Computational Thermochemistry 1 1 Computer Experiment 5: Computational Thermochemistry 1.1 Background: Within the frame of this experiment you will employ methods of statistical thermodynamics in order

More information

on-line kinetics 3!!! Chemistry 1B Fall 2013

on-line kinetics 3!!! Chemistry 1B Fall 2013 on-line kinetics 3!!! Chemistry 1B Fall 2013 1 on-line kinetics 3!!! Chemistry 1B Fall 2013 Mechanism of a chemical reaction Elementary reactions Activation energy and reaction coordinate diagram 2 Chemistry

More information

CHAPTER 13 Molecular Spectroscopy 2: Electronic Transitions

CHAPTER 13 Molecular Spectroscopy 2: Electronic Transitions CHAPTER 13 Molecular Spectroscopy 2: Electronic Transitions I. General Features of Electronic spectroscopy. A. Visible and ultraviolet photons excite electronic state transitions. ε photon = 120 to 1200

More information

Structural Bioinformatics (C3210) Molecular Mechanics

Structural Bioinformatics (C3210) Molecular Mechanics Structural Bioinformatics (C3210) Molecular Mechanics How to Calculate Energies Calculation of molecular energies is of key importance in protein folding, molecular modelling etc. There are two main computational

More information

HONOUR SCHOOL OF NATURAL SCIENCE. Final Examination GENERAL PHYSICAL CHEMISTRY I. Answer FIVE out of nine questions

HONOUR SCHOOL OF NATURAL SCIENCE. Final Examination GENERAL PHYSICAL CHEMISTRY I. Answer FIVE out of nine questions HONOUR SCHOOL OF NATURAL SCIENCE Final Examination GENERAL PHYSICAL CHEMISTRY I Monday, 12 th June 2000, 9.30 a.m. - 12.30 p.m. Answer FIVE out of nine questions The numbers in square brackets indicate

More information

Chemistry 1B, Fall 2012 Lecture 23

Chemistry 1B, Fall 2012 Lecture 23 Chemistry 1B Fall 01 [more] Chemical Kinetics 1 kinetics and mechanism of reaction NO (g) + CO(g) ô NO(g) + CO (g) at T< 500K if the reaction was a collision between a NO molecule and a CO molecule one

More information

Name: UNIT 5 KINETICS NOTES PACEKT #: KINETICS NOTES PART C

Name: UNIT 5 KINETICS NOTES PACEKT #: KINETICS NOTES PART C KINETICS NOTES PART C IV) Section 14.4 The Change of Concentration with Time A) Integrated Rate Law: shows how the concentration of the reactant(s) varies with time 1) [A]0 is the initial concentration

More information

Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland

Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland Example questions for Molecular modelling (Level 4) Dr. Adrian Mulholland 1) Question. Two methods which are widely used for the optimization of molecular geometies are the Steepest descents and Newton-Raphson

More information

Chapter 11: CHEMICAL KINETICS

Chapter 11: CHEMICAL KINETICS Chapter : CHEMICAL KINETICS Study of the rate of a chemical reaction. Reaction Rate (fast or slow?) Igniting gasoline? Making of oil? Iron rusting? We know about speed (miles/hr). Speed Rate = changes

More information

Chemical Kinetics. Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display.

Chemical Kinetics. Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chemical Kinetics Copyright The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chemical Kinetics Thermodynamics does a reaction take place? Kinetics how fast does a reaction

More information

Lecture 14 February 3, 2014 Rules for Chem. React. - Woodward-Hoffmann

Lecture 14 February 3, 2014 Rules for Chem. React. - Woodward-Hoffmann Lecture 14 February 3, 2014 Rules for Chem. React. - Woodward-Hoffmann Nature of the Chemical Bond with applications to catalysis, materials science, nanotechnology, surface science, bioinorganic chemistry,

More information

Molecular energy levels

Molecular energy levels Molecular energy levels Hierarchy of motions and energies in molecules The different types of motion in a molecule (electronic, vibrational, rotational,: : :) take place on different time scales and are

More information

( ) Thermodynamic selectivity (reversible reactions)

( ) Thermodynamic selectivity (reversible reactions) II. Reactivity A) General Principles Fundamental Equations G o Ea / RT = "RT ln K eq k = Ae 1) Kinetics vs Thermodynamics Kinetic selectivity (irreversible reactions) [ P 1 ] [ ] = ln k 1 P 2 ( ) = " #G

More information

Theoretical Photochemistry WiSe 2016/17

Theoretical Photochemistry WiSe 2016/17 Theoretical Photochemistry WiSe 2016/17 Lecture 8 Irene Burghardt burghardt@chemie.uni-frankfurt.de) http://www.theochem.uni-frankfurt.de/teaching/ Theoretical Photochemistry 1 Topics 1. Photophysical

More information

Principles of Molecular Spectroscopy

Principles of Molecular Spectroscopy Principles of Molecular Spectroscopy What variables do we need to characterize a molecule? Nuclear and electronic configurations: What is the structure of the molecule? What are the bond lengths? How strong

More information

3. RATE LAW AND STOICHIOMETRY

3. RATE LAW AND STOICHIOMETRY Page 1 of 39 3. RATE LAW AND STOICHIOMETRY Professional Reference Shelf R3.2 Abbreviated Lecture Notes Full Lecture Notes I. Overview II. Introduction A. The Transition State B. Procedure to Calculate

More information

Chemical Kinetics. Reaction Mechanisms

Chemical Kinetics. Reaction Mechanisms Chemical Kinetics Kinetics is a study of the rate at which a chemical reaction occurs. The study of kinetics may be done in steps: Determination of reaction mechanism Prediction of rate law Measurement

More information

DIABATIC AND ADIABATIC PROCESSES IN PHOTOCHEMISTRY. TH. FöRSTER

DIABATIC AND ADIABATIC PROCESSES IN PHOTOCHEMISTRY. TH. FöRSTER DIABATIC AND ADIABATIC PROCESSES IN PHOTOCHEMISTRY TH. FöRSTER Inst itut für Physikalische Chemie der Universitdt, 7000 Stuttgart 1, Germany, Wiederholdstrasse 15. ABSTRACT Photochemical reactions may

More information

l ; Y l,l-1, Y l,-1+1; etc., plus a single non-degenerate function Y l,0, in axial symmetry.

l ; Y l,l-1, Y l,-1+1; etc., plus a single non-degenerate function Y l,0, in axial symmetry. Chapter 6 Along "Reaction Paths", Orbitals Can be Connected One-to-One According to Their Symmetries and Energies. This is the Origin of the Woodward-offmann Rules I. Reduction in Symmetry As fragments

More information

Express the transition state equilibrium constant in terms of the partition functions of the transition state and the

Express the transition state equilibrium constant in terms of the partition functions of the transition state and the Module 7 : Theories of Reaction Rates Lecture 33 : Transition State Theory Objectives After studying this Lecture you will be able to do the following. Distinguish between collision theory and transition

More information

DE-MAN HAN, GUO-LIANG DAI*, ZHEN-ZHONG YAN, CHUAN-FENG WANG, AI-GUO ZHONG

DE-MAN HAN, GUO-LIANG DAI*, ZHEN-ZHONG YAN, CHUAN-FENG WANG, AI-GUO ZHONG J. Chil. Chem. Soc., 55, Nº 1 (010) CARBON DIOXIDE ACTIVATION BY Y ATOM AND Y + CATION IN THE GAS PHASE: A DENSITY FUNCTIONAL THEORETICAL STUDY DE-MAN HAN, GUO-LIANG DAI*, ZHEN-ZHONG YAN, CHUAN-FENG WANG,

More information

CHEM Dr. Babb s Sections Lecture Problem Sheets

CHEM Dr. Babb s Sections Lecture Problem Sheets CHEM 116 - Dr. Babb s Sections Lecture Problem Sheets Kinetics: Integrated Form of Rate Law 61. Give the integrated form of a zeroth order reaction. Define the half-life and find the halflife for a general

More information

Transition Theory Abbreviated Derivation [ A - B - C] # E o. Reaction Coordinate. [ ] # æ Æ

Transition Theory Abbreviated Derivation [ A - B - C] # E o. Reaction Coordinate. [ ] # æ Æ Transition Theory Abbreviated Derivation A + BC æ Æ AB + C [ A - B - C] # E A BC D E o AB, C Reaction Coordinate A + BC æ æ Æ æ A - B - C [ ] # æ Æ æ A - B + C The rate of reaction is the frequency of

More information

CHAPTER 12 CHEMICAL KINETICS

CHAPTER 12 CHEMICAL KINETICS 5/9/202 CHAPTER 2 CHEMICAL KINETICS CHM52 GCC Kinetics Some chemical reactions occur almost instantaneously, while others are very slow. Chemical Kinetics - study of factors that affect how fast a reaction

More information

Light-Activated Chemical Probing of Nucleobase Solvent Accessibility Inside

Light-Activated Chemical Probing of Nucleobase Solvent Accessibility Inside Light-Activated Chemical Probing of Nucleobase Solvent Accessibility Inside Cells Chao Feng 1,$, Dalen Chan 1,$, Jojo Joseph 2, Mikko Muuronen 3, William H. Coldren 2, Nan Dai 4, Ivan R. Corrêa Jr. 4,

More information

Chemistry 1B, Fall 2016 Topic 23

Chemistry 1B, Fall 2016 Topic 23 Chemistry 1B Fall 016 [more] Chemical Kinetics 1 goals for topic 3 kinetics and mechanism of chemical reaction energy profile and reaction coordinate activation energy and temperature dependence of rate

More information

Conjugated Systems, Orbital Symmetry and UV Spectroscopy

Conjugated Systems, Orbital Symmetry and UV Spectroscopy Conjugated Systems, Orbital Symmetry and UV Spectroscopy Introduction There are several possible arrangements for a molecule which contains two double bonds (diene): Isolated: (two or more single bonds

More information

Chemistry 112 Midterm January 30, 2006

Chemistry 112 Midterm January 30, 2006 1. (35 points) The reaction of A and B to form products is thought to go according to the following mechanism: A + 2B 2C + D k -1 2C 2C 2C + M k 2 k 3 k 4 G H J + M (a) (5) Identify the products in this

More information

Used for MS Short Course at Tsinghua by R. Graham Cooks, Hao Chen, Zheng Ouyang, Andy Tao, Yu Xia and Lingjun Li

Used for MS Short Course at Tsinghua by R. Graham Cooks, Hao Chen, Zheng Ouyang, Andy Tao, Yu Xia and Lingjun Li Lecture 4 Ion Thermochemistry Reminmder of terms and quantities Thermochemical parameters AE Appearance Energy EA Electron Affinity IE Ionization Energy PA Proton Affinity (enthalpic) GB Gas Phase Basicity

More information

Resonances in Chemical Reactions : Theory and Experiment. Toshiyuki Takayanagi Saitama University Department of Chemistry

Resonances in Chemical Reactions : Theory and Experiment. Toshiyuki Takayanagi Saitama University Department of Chemistry Resonances in Chemical Reactions : Theory and Experiment Toshiyuki Takayanagi Saitama University Department of Chemistry What is Chemical Reaction? Collision process between molecules (atoms) containing

More information

Recapping where we are so far

Recapping where we are so far Recapping where we are so far Valence bond constructions, valence, valence electron counting, formal charges, etc Equivalent neutral classification and MLX plots Basic concepts for mechanism and kinetics

More information

Chapter 12. Chemical Kinetics

Chapter 12. Chemical Kinetics Chapter 12 Chemical Kinetics Section 12.1 Reaction Rates Reaction Rate Change in concentration of a reactant or product per unit time. Rate = concentration of A at time t t 2 1 2 1 concentration of A at

More information

An Introduction to Quantum Chemistry and Potential Energy Surfaces. Benjamin G. Levine

An Introduction to Quantum Chemistry and Potential Energy Surfaces. Benjamin G. Levine An Introduction to Quantum Chemistry and Potential Energy Surfaces Benjamin G. Levine This Week s Lecture Potential energy surfaces What are they? What are they good for? How do we use them to solve chemical

More information

Semiclassical molecular dynamics simulations of excited state double-proton transfer in 7-azaindole dimers

Semiclassical molecular dynamics simulations of excited state double-proton transfer in 7-azaindole dimers JOURNAL OF CHEMICAL PHYSICS VOLUME 110, NUMBER 20 22 MAY 1999 Semiclassical molecular dynamics simulations of excited state double-proton transfer in 7-azaindole dimers Victor Guallar, Victor S. Batista,

More information

4. Studying Dynamic Processes by NMR

4. Studying Dynamic Processes by NMR 4. Studying Dynamic Processes by NMR Intramolecular processes rotations (M-C, M-M, C-C or other bonds) skeletal rearrangements ring whizzing (migration of metal on 1 -C 5 H 5 rings) hapticity changes (

More information

CFC: chlorofluorocarbons

CFC: chlorofluorocarbons The rate of reaction is markedly affected by temperature. Chemical Kinetics & k versus T Two theories were developed to explain the temperature effects. 1. 2. 2 UV radiation strikes a CFC molecule causing

More information

CHAPTER 13 (MOORE) CHEMICAL KINETICS: RATES AND MECHANISMS OF CHEMICAL REACTIONS

CHAPTER 13 (MOORE) CHEMICAL KINETICS: RATES AND MECHANISMS OF CHEMICAL REACTIONS CHAPTER 13 (MOORE) CHEMICAL KINETICS: RATES AND MECHANISMS OF CHEMICAL REACTIONS This chapter deals with reaction rates, or how fast chemical reactions occur. Reaction rates vary greatly some are very

More information

Computational Methods. Chem 561

Computational Methods. Chem 561 Computational Methods Chem 561 Lecture Outline 1. Ab initio methods a) HF SCF b) Post-HF methods 2. Density Functional Theory 3. Semiempirical methods 4. Molecular Mechanics Computational Chemistry " Computational

More information

10 Chemical reactions in aqueous solutions

10 Chemical reactions in aqueous solutions The Physics and Chemistry of Water 10 Chemical reactions in aqueous solutions Effects of water in reactions Hydration of reactants cause steric barriers Increases attraction between nonpolar reactants

More information

Chapter 12 What Is Temperature? What Is Heat Capacity?

Chapter 12 What Is Temperature? What Is Heat Capacity? Chapter 2 What Is Temperature? What Is Heat Capacity?. Heat capacity peaks from phase transitions. The peak heat capacity in the figure below shows that helium gas adsorbed on graphite undergoes a transition

More information

CHM 5423 Atmospheric Chemistry Notes on kinetics (Chapter 4)

CHM 5423 Atmospheric Chemistry Notes on kinetics (Chapter 4) CHM 5423 Atmospheric Chemistry Notes on kinetics (Chapter 4) Introduction A mechanism is one or a series of elementary reactions that convert reactants into products or otherwise model the chemistry of

More information

Vibrational Spectra (IR and Raman) update Tinoco has very little, p.576, Engel Ch. 18, House Ch. 6

Vibrational Spectra (IR and Raman) update Tinoco has very little, p.576, Engel Ch. 18, House Ch. 6 Vibrational Spectra (IR and Raman)- 2010 update Tinoco has very little, p.576, Engel Ch. 18, House Ch. 6 Born-Oppenheimer approx. separate electron-nuclear Assume elect-nuclear motion separate, full wave

More information

Energy Transfer in Chemical Reaction

Energy Transfer in Chemical Reaction 1. 1981.10.30 Energy Transfer in Chemical Reaction 2. 1981.11.20 3. 1981.12.18 W.T.Borden (U.of Washington) Methylenecyclopene rearrangement 4. 1982. 1.22 5. 1982. 2.13 6. 1982. 3.19 MCSCF 7. 1982. 4.16

More information

Thermodynamics and Kinetics Review

Thermodynamics and Kinetics Review Chapter 2 Thermodynamics and Kinetics Review 1 Chapter 2 Thermodynamics and Kinetics Review This chapter will refresh your memory for concepts taught in physical chemistry and general chemistry courses.

More information

Chem 116 POGIL Worksheet - Week 6 Kinetics - Concluded

Chem 116 POGIL Worksheet - Week 6 Kinetics - Concluded Chem 116 POGIL Worksheet - Week 6 Kinetics - Concluded Why? The half-life idea is most useful in conjunction with first-order kinetics, which include many chemical reactions and all nuclear decay processes.

More information

Physics and Chemistry with Diatomic Molecules Near Absolute Zero. Tanya Zelevinsky & ZLab Columbia University, New York

Physics and Chemistry with Diatomic Molecules Near Absolute Zero. Tanya Zelevinsky & ZLab Columbia University, New York Physics and Chemistry with Diatomic Molecules Near Absolute Zero Tanya Zelevinsky & ZLab Columbia University, New York Pupin Labs @ Columbia E. Fermi I. I. Rabi 10 What is Ultracold? MK kk 7 6 5 4 3 2

More information

Chemistry 483 Lecture Topics Fall 2009

Chemistry 483 Lecture Topics Fall 2009 Chemistry 483 Lecture Topics Fall 2009 Text PHYSICAL CHEMISTRY A Molecular Approach McQuarrie and Simon A. Background (M&S,Chapter 1) Blackbody Radiation Photoelectric effect DeBroglie Wavelength Atomic

More information

Modelling of Reaction Mechanisms KJE-3102

Modelling of Reaction Mechanisms KJE-3102 Modelling of Reaction Mechanisms KJE-3102 Kathrin H. Hopmann Kathrin.hopmann@uit.no Outline Potential energy surfaces Transition state optimization Reaction coordinates Imaginary frequencies Verification

More information

Marcus Theory for Electron Transfer a short introduction

Marcus Theory for Electron Transfer a short introduction Marcus Theory for Electron Transfer a short introduction Minoia Andrea MPIP - Journal Club -Mainz - January 29, 2008 1 Contents 1 Intro 1 2 History and Concepts 2 2.1 Frank-Condon principle applied to

More information

IV. Classical Molecular Dynamics

IV. Classical Molecular Dynamics IV. Classical Molecular Dynamics Basic Assumptions: 1. Born-Oppenheimer Approximation 2. Classical mechanical nuclear motion Unavoidable Additional Approximations: 1. Approximate potential energy surface

More information

Jahn-Teller Intersections of Potential Energy Surfaces: A Paradigm for Nonadiabatic Excited-State Dynamics

Jahn-Teller Intersections of Potential Energy Surfaces: A Paradigm for Nonadiabatic Excited-State Dynamics Jahn-Teller Intersections of Potential Energy Surfaces: A Paradigm for Nonadiabatic Excited-State Dynamics Horst Köppel Horst.Koeppel@pci.uni-heidelberg.de Theoretische Chemie Physikalisch-Chemisches Institut

More information

Chapter 2 Experimental sources of intermolecular potentials

Chapter 2 Experimental sources of intermolecular potentials Chapter 2 Experimental sources of intermolecular potentials 2.1 Overview thermodynamical properties: heat of vaporization (Trouton s rule) crystal structures ionic crystals rare gas solids physico-chemical

More information

Energy Barriers and Rates - Transition State Theory for Physicists

Energy Barriers and Rates - Transition State Theory for Physicists Energy Barriers and Rates - Transition State Theory for Physicists Daniel C. Elton October 12, 2013 Useful relations 1 cal = 4.184 J 1 kcal mole 1 = 0.0434 ev per particle 1 kj mole 1 = 0.0104 ev per particle

More information

QUANTUM AND THERMAL MOTION IN MOLECULES FROM FIRST-PRINCIPLES

QUANTUM AND THERMAL MOTION IN MOLECULES FROM FIRST-PRINCIPLES QUANTUM AND THERMAL MOTION IN MOLECULES FROM FIRST-PRINCIPLES 1 Tapio T. Rantala, Department of Physics, Tampere University of Technology http://www.tut.fi/semiphys CONTENTS MOTIVATION PATH INTEGRAL APPROACH

More information

Chemical Kinetics. Reaction Rate. Reaction Rate. Reaction Rate. Reaction Rate. Chapter 13: Chemical Kinetics: Rates of Reactions

Chemical Kinetics. Reaction Rate. Reaction Rate. Reaction Rate. Reaction Rate. Chapter 13: Chemical Kinetics: Rates of Reactions Chemical Kinetics The study of speeds of reactions and the nanoscale pathways or rearrangements by which atoms and molecules are transformed to products Chapter 3: Chemical Kinetics: Rates of Reactions

More information

Organometallic alkane and noble-gas complexes in conventional and supercritical fluids*

Organometallic alkane and noble-gas complexes in conventional and supercritical fluids* Pure Appl. Chem., Vol. 73, No. 3, pp. 443 447, 2001. 2001 IUPAC Organometallic alkane and noble-gas complexes in conventional and supercritical fluids* Gavin I. Childs, David C. Grills, Xue Z. Sun, and

More information

Δx Δt. Any average rate can be determined between measurements at 2 points in time.

Δx Δt. Any average rate can be determined between measurements at 2 points in time. Chapter 13 Chemical Kinetics Some reaction are faster than others! Chem 210 Jasperse Ch. 13 Handouts 1 Three factors (in addition to the nature of the reacting chemicals themselves ) 1. Concentrations

More information

Chemical Kinetics AP Chemistry Lecture Outline

Chemical Kinetics AP Chemistry Lecture Outline Chemical Kinetics AP Chemistry Lecture Outline Name: Factors that govern rates of reactions. Generally... (1)...as the concentration of reactants increases, rate (2)...as temperature increases, rate (3)...with

More information

Gas Phase Vibrational Spectroscopy of the Protonated Water Pentamer: The Role of Isomers and Nuclear Quantum Effects

Gas Phase Vibrational Spectroscopy of the Protonated Water Pentamer: The Role of Isomers and Nuclear Quantum Effects Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is the Owner Societies 2016 Supplementary Information Gas Phase Vibrational Spectroscopy of the Protonated

More information

Chapter 12. Kinetics. Factors That Affect Reaction Rates. Factors That Affect Reaction Rates. Chemical. Kinetics

Chapter 12. Kinetics. Factors That Affect Reaction Rates. Factors That Affect Reaction Rates. Chemical. Kinetics PowerPoint to accompany Kinetics Chapter 12 Chemical Kinetics Studies the rate at which a chemical process occurs. Besides information about the speed at which reactions occur, kinetics also sheds light

More information