Chromosomes. Which chromosomes in a nucleus are similar? Which are identical? Which are completely different?

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1 Chromosomes The big questions: Which chromosomes in a nucleus are similar? Which are identical? Which are completely different? How do chromosomes align during mitosis? How do chromosomes align during meiosis?

2 Using pipe cleaners to represent the chromosomes in a fruit fly: different chromosomes similar chromosomes (homologs)

3 Add beads to represent genes (colors can show alleles): different chromosomes similar chromosomes (homologs)

4 Leave just the different color/allele beads to mark the homologs: different chromosomes similar chromosomes (homologs)

5 Duplicate the chromosomes in preparation for division: after duplication different chromosomes similar chromosomes (homologs) identical chromosomes (sister chromatids)

6 Student activities: Model mitosis and meiosis with pipe cleaners & beads Devise 2D drawings Practice (going back and forth between pipe cleaners and drawings as needed) Apply pipe cleaners and beads to new situations

7 Create chromosomes for a 2n=6 organism model mitosis model meiosis x x x

8 Other uses of pipe cleaners and beads: Ploidy -model trisomy vs triploidy Complementation -model complementation vs failure to complement different chromosomes similar chromosomes (homologs)

9 Other uses of pipe cleaners and beads: Ploidy model trisomy model triploidy

10 Other uses of pipe cleaners and beads: Complementation m1/m1 homozygotes show a particular phenotype. m2/m2 homozygotes show the same phenotype. Are m1 and m2 mutations in the same gene or in different genes? model complementation model failure to complement

11 Crossing Over and Recombinant Chromosomes

12 Using pool noodles to discuss crossing over and % recombinants Locke & McDermid (2005) Genetics 170: 5-6 describe using pool noodles to teach mitotis and meiosis, as shown below

13 Pool noodles are great for allowing the students to create many different cross-over events and see the consequences, e.g., recombinant and parental (non-recombinant) chromosomes that will end up in gametes. Here s one event: P = Parental homologs R = Recombinant A A a a A a A a centromere b b B B b b B B sister chromatids P R R P

14 Activation of Gene Expression How do genes get turned on in response to signals? This skit brings the process to life, and helps students think about dynamic processes and the importance of drawing cartoon renditions.

15 Example: How steroids (e.g. testosterone) turn on genes for maleness, a lesson designed by Roger Innes A description of the process in words: 1) Steroids bind to proteins called receptors. 2) Steroid receptors dimerize and bind DNA. 3) Steroid receptors that are bound to DNA recruit other proteins that function as co-activators. 4) Coactivators recruit RNA polymerase, which binds to the promoter of a gene and initiates transcription.

16 I ask the students to create a living model depicting how testosterone activates expression of specific genes! I need a group of > 2 folks are testosterone receptor 1 is coactivator 1 is RNA polymerase Using the proper sequence of events, act out the process of gene activation according to the following rules: - Testosterone must be perceived. - A gene with the following sequence must be found. GAGCGCATTATTATGCGCTC! CTCGCGTAATAATACGCGAG! - Demonstrate the proper protein-protein and protein-dna interactions. - What is the end result? The 96 students not acting out the living model direct the activities (the fishbowl technique ; Silberman, 1996).

17 testosterone receptors

18 dimerized testosterone receptors with their testosterone caps

19 dimerized testosterone receptors find and bind their target sequence

20 coactivator is recruited

21 RNA polymerase is recruited

22 transcription of the target gene

23 Assessment: Students are asked to 1) Depict the steps of gene activation by testosterone in cartoon form. 2) List 1 or 2 questions that this modeling exercise and their cartoon raised in their mind. Outcome: 1) Students realized the utility and importance of modeling and how it can help them identify what they don t understand. 2) Many students posed intellectually sophisticated questions, similar to those that scientists are currently asking and testing.

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