Drosophila Caspases Involved in Developmentally Regulated Programmed Cell Death of Peptidergic Neurons during Early Metamorphosis
|
|
- Cody Pierce
- 6 years ago
- Views:
Transcription
1 RESEARCH ARTICLE Drosophila Caspases Involved in Developmentally Regulated Programmed Cell Death of Peptidergic Neurons during Early Metamorphosis Gyunghee Lee, 1 Zixing Wang, 2 Ritika Sehgal, 1 Chun-Hong Chen*, 3 Keiko Kikuno, 1 Bruce Hay, 3 and Jae H. Park 1,2 * 1 Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee Graduate Program of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee Department of Biology, California Institute of Technology, Pasadena, California ABSTRACT A great number of obsolete larval neurons in the Drosophila central nervous system are eliminated by developmentally programmed cell death (PCD) during early metamorphosis. To elucidate the mechanisms of neuronal PCD occurring during this period, we undertook genetic dissection of seven currently known Drosophila caspases in the PCD of a group of interneurons (vcrz) that produce corazonin (Crz) neuropeptide in the ventral nerve cord. The molecular death program in the vcrz neurons initiates within 1 hour after pupariation, as demonstrated by the cytological signs of cell death and caspase activation. PCD was significantly suppressed in dronc-null mutants, but not in null mutants of either dredd or strica. A double mutation lacking both dronc and strica impaired PCD phenotype more severely than did a dronc mutation alone, but comparably to a triple dredd/strica/dronc mutation, indicating that dronc is a main initiator caspase, while strica plays a minor role that overlaps with dronc s. As for effector caspases, vcrz PCD requires both ice and dcp-1 functions, as they work cooperatively for a timely removal of the vcrz neurons. Interestingly, the activation of the Ice and Dcp-1 is not solely dependent on Dronc and Strica, implying an alternative pathway to activate the effectors. Two remaining effector caspase genes, decay and damm, found no apparent functions in the neuronal PCD, at least during early metamorphosis. Overall, our work revealed that vcrz PCD utilizes dronc, strica, dcp- 1, and ice wherein the activation of Ice and Dcp-1 requires a novel pathway in addition to the initiator caspases. J. Comp. Neurol. 519:34 48, VC 2010 Wiley-Liss, Inc. INDEXING TERMS: corazonin; neuropeptide; peptidergic neurons; Drosophila melanogaster; metamorphosis; apoptosis; caspase Most animal species undergo a juvenile phase prior to reproductively mature adulthood. In particular, holometabolous insects, including fruit flies, exhibit the most dramatic case of metamorphosis during which most larval tissues along with a great number of neurons in the central nervous system (CNS) are removed by programmed cell death (PCD), while adult-specific tissues and neurons are formed de novo from imaginal tissues and postembryonic neuroblasts, respectively (Riddiford, 1993; Truman et al., 1993, 1994). Therefore, timely execution of PCD is one of the most essential cellular processes required for successful metamorphic development. Caspases are the most important executioners for PCD and classified into two subgroups, initiators and effectors, based on their activation mode and prodomain length. VC 2010 Wiley-Liss, Inc. Activation of initiator caspases in response to death signals is a prerequisite for subsequent activation of the effector caspases (Shi, 2002; Hay and Guo, 2006). Currently, there are seven caspases known in Drosophila. Additional supporting information may be found in the online version of this article *Chen-hong Chen present address: Division of Molecular and Genomic Medicine, National Health Research Institutes, 35 Keyan Road, Zhunan Town, Miaoli County 350, Taiwan. Grant sponsor: National Science Foundation; Grant number: IOS and Hunsicker award (to J.H.P.); Grant sponsor: National Institutes of Health; Grant number: GM (to B.H.). *CORRESPONDENCE TO: Jae H. Park, Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, TN jhpark@utk.edu Received March 9, 2010; Revised May 18, 2010; Accepted August 22, 2010 DOI /cne Published online September 14, 2010 in Wiley Online Library (wileyonlinelibrary.com) 34 The Journal of Comparative Neurology Research in Systems Neuroscience 519:34 48 (2011)
2 Caspases-dependent neuronal cell death Three of them, dronc, dredd, and strica, are considered initiators and the remaining four, dcp-1, ice, damm, and decay, as effectors (for a review, see Kumar et al., 2007). Although most dronc-null mutants die during pupal development, flies lacking both maternal and zygotic contributions of dronc function are embryonic lethal, suggesting that dronc is essential for Drosophila PCD during embryogenesis as well as metamorphosis (Chew et al., 2004; Daish et al., 2004; Waldhuber et al., 2005; Xu et al., 2005). However, lack of dronc and dark function for the removal of the larval midgut implies that this death enzyme works in a tissue-specific manner (Daish et al., 2004; Mills et al., 2006). dronc isalsoknowntofunctioninnonapoptotic processes such as dendritic pruning of the C4da sensory neurons (Huh et al., 2004; Kuo et al., 2006; Williams et al., 2006). Unlike dronc, dredd-null mutants are viable and dredd s primary function is so far limited to an innate immune response (Leulier et al., 2000) and sperm individualization (Huh et al., 2004). Despite its unknown activation mode, strica is considered to play a potential role as an initiator due to its rather long prodomain (Doumanis et al., 2001). Flies bearing a deletion of the strica locus are viable and fertile, and strica s function, cooperatively with dronc, is associated with PCD occurring during oogenesis, suggesting a limited role played by this enzyme for developmental PCD (Baum et al., 2007). Nevertheless, the expression of strica transcripts in the larval salivary glands and midgut indicates PCD-relevant function of this gene in these tissues (Doumanis et al., 2001). Multiple lines of evidence suggest that ice is the most important effector caspase for developmental PCD in Drosophila. ice-null mutants show severe defects in PCD during both embryogenesis and metamorphosis and die mostly at late pupal stages, suggesting that ice-mediated PCD is essential for proper pupal development (Kondo et al., 2006; Muro et al., 2006; Xu et al., 2006). By comparison, dcp-1, a close relative of ice, seems to have a limited proapoptotic function. Flies devoid of dcp-1 develop normally into fertile APF CNS Crz damm dark dcp-1 decay dredd dronc ice IHC PCD VNC strica vcrz WL3 WT Abbreviations After puparium formation Central nervous system Corazonin Death-associated molecule related to Mch2 Drosophila Apaf-1-related killer (Flybase: Ark) Death caspase-1 Death executioner caspase related to Apopain/Yama Death related ced-3/nedd2-like Drosophila Nedd-2 like caspase Interleukin-1b-converting enzyme Immunohistochemistry Programmed cell death Ventral nerve cord Serine/Threonine Rich Caspase (Flybase: dream) Ventral corazonergic neuronal group Wandering third instar larva Wildtype adults with occasional extra bristles and display some defective PCD phenotypes in the female germline and developing eye imaginal discs (Laundrie et al., 2003; Kondo et al., 2006; Mendes et al., 2006). Nevertheless, a double mutant lacking both dcp-1 and ice dies around mid-pupal stages with more severe PCD defects than a single ice-null mutant does, supporting that dcp-1 has both overlapping and nonoverlapping functions with ice for proper metamorphic development (Xu et al., 2006). Expression of cell death in vitro and its endogenous expression was observed in various larval tissues including midgut and salivary glands, suggesting its potential role in developmentally regulated PCD (Dorstyn et al., 1999). However, recent studies showed that decay is unnecessary for PCD of the larval midgut (Denton et al., 2009) and for the normal development into adult, implying that decay is a nonessential caspase for developmental PCD (Kondo et al., 2006). Like decay, damm is capable of inducing cell death ectopically in vitro and in vivo to some extent (Harvey et al., 2001). However, its intrinsic PCD-associated functions are not well understood as a loss-of-function mutation for this gene is currently unavailable. During metamorphosis of insects, the CNS is subjected to an extensive remodeling process wherein the larval neurons face either PCD or altercations in their neural processes (Truman et al., 1993; Weeks, 2003). While recent studies have added significant molecular bases to the latter event (reviewed in Luo and O Leary, 2005; Saxena and Caroni, 2007), understandings of developmentally regulated neuronal PCD in depth have been staggered largely due to the lack of a neuronal system that is identifiable and malleable to genetic and molecular analyses. Our previous study identified eight pairs of corazonin-expressing peptidergic neurons (vcrz), each pair located from the 2nd thoracic to the 6th abdominal neuromere in the ventral nerve cord (VNC). The vcrz neurons undergo PCD shortly after the onset of metamorphosis and the ecdysone signal plays a role as a pivotal endocrine cue that initiates the death program in them (Choi et al., 2006). In the present study we undertook comprehensive genetic dissection of all seven caspases to elucidate their individual as well as cooperative roles in the PCD of vcrz neurons. MATERIALS AND METHODS Fly strains Flies were raised at 25 C in food vials containing yeast-cornmeal-dextrose-agar medium supplemented with methyl paraben (Tegosept) as a preservative. Canton-S was used as a wildtype, and yellow white (y w)or w 1118 strain as genetic controls. Two dronc-null mutant alleles, dronc I24 and dronc I29, were examined as either in trans with dronc 51 or homozygotes (Chew et al., 2004; Xu The Journal of Comparative Neurology Research in Systems Neuroscience 35
3 Lee et al. et al., 2005). The following null alleles were obtained as described: dredd D55, dredd L23, and dredd B118 (Leulier et al., 2000); dcp-1 Prev1 (Laundrie et al., 2003); strica 4 (Baum et al., 2007), and ice D1 (Muro et al., 2006). For a damm mutation, we characterized damm f02209 fly line carrying an insertion of a piggybac transposable element PBac{WH} within this locus (Bloomington stock no , Bloomington, IN; Thibault et al., 2004). For a putative decay mutation, we examined P{XP}d07129 flies bearing a P-element in upstream region of the decay (Exelixis Collection d07129). For transgenic manipulations, UAS-dronc (Quinn et al., 2000), UAS-CD8-PARP-Venus (Williams et al., 2006), or UAS-p35 (Hay et al., 1994) were crossed to a Crz-gal4 driver (Choi et al., 2008). A double transgenic Crz-gal4 line (2) combining two independent transgenes in the 2nd and 3rd chromosomes was used in some experiments. To induce targeted micro-rna-mediated gene silencing, UAS-mi-ice, UAS-mi-dcp-1, UAS-miiceþdcp-1, UAS-mi-damm, and UAS-mi-decay lines were constructed, as described in Chen et al. (2007). Histology Anti-Crz Polyclonal rabbit anti-crz (aka anti-cap; Choi et al., 2005, 2006) was raised against a synthetic peptide (VDPDPENSAHPRLSN) corresponding to the associated region of the Crz precursor. The immunoreactive patterns were identical to the Crz mrna expression revealed by in situ hybridization and Crz-gal4 activity, thus validating the specificity of this antibody to the Crz (Choi et al., 2005, 2006, 2008; Lee et al., 2008). Anti-Crz was applied at a dilution of 1:1,200 for wholemount immunohistochemistry (IHC). Anti-cPARP To detect endogenous caspase activity within the Crz neurons, progeny derived from a crossing between Crzgal4 and UAS-CD8-PARP-Venus were immunostained with anti-cleaved PARP (cparp) at 1:300 dilution as described (Williams et al., 2006). The CD8-PARP-Venus fusion proteins, when cleaved by caspases, expose a unique N-terminal epitope, which is readily detectable with anti-cparp in Drosophila neurons (Williams et al., 2006). The anticparp was purchased from AbCam (Cambridge, MA; cat. no. Ab2317), which was originally generated by BioVision (Mountain View, CA; cat. no ). This commercial rabbit polyclonal antibody was raised against a short peptide immunogen (GVDEVAKKKS), as provided by BioVision, and was reported to recognize only the cparp ( The antibody did not produce any immunoreactive signals in an entire CNS of wildtype (data not shown). In addition, all Crz neurons expressing the intact CD8-PARP-Venus (Fig. 3Ai,Bi) were not recognized by this antibody in the larval and white prepupal CNS (Fig. 3A,B), verifying no immunoreactivity between this fusion protein and anticparp. Moreover, no cparp-immunoreactivity was observed in the protocerebral DL neurons that persist into an adult brain (Fig. 3A D). We previously have shown the survival of these larval neurons throughout the metamorphosis using in situ hybridization and immunohistochemistry (Choi et al., 2005; Lee et al., 2008). These data together suggest that the cparp-immunoreactivity is specific to the vcrz neurons that are undergoing caspase-dependent apoptosis. A Western blot experiment using the same transgenic UAS-CD8-PARP-Venus and anti-cparp also showed that the antibody detects specifically cleaved PARP-Venus in the Drosophila retina, only when the death of this tissue was induced (Mendes et al., 2009). This result further supports the relevance of this system as a readout of caspase activity in vivo. Whole-mount CNS IHC CNSs were dissected in phosphate-buffered saline (PBS) and fixed in Zamboni s fixative containing 4% paraformaldehyde and 7.5% picric acid in 0.1 M sodium phosphate buffer (SPB, ph7.4) at 4 C overnight (Helfrich-Förster et al., 2000). Fixed samples were rinsed three times in SPB and subsequently three times in TNT buffer (0.1 M Tris, ph7.4, 0.3M NaCl, 0.5% Triton X-100) for 15 minutes each. After rinsing, tissues were preincubated in blocking buffer containing 4% normal donkey serum and 0.02% NaN 3 in TNT at room temperature for hours. Incubation with primary antibody continued overnight at 4 C, followed by washing in TNT (6 10 minutes) at room temperature. Primary antibodies were detected by incubating tissues in a solution containing rabbit anti-igg secondary antibody conjugated with tetramethyl rhodamine (TRITC) (Jackson ImmunoResearch, West Grove, PA) at 1:200 dilution in TNT including 2% normal donkey serum for 1 2 hours at room temperature in dark. The tissues were rinsed in TNT (3 10 minutes) and subsequently in SPB (3 10 minutes) to remove unbound secondary antibodies. The samples were mounted in medium containing 80% glycerol, SPB, and 2% n-propyl gallate and viewed with an Olympus BX61 epifluorescence microscope equipped with a CC12 camera. Images were taken at serial optical sections (thickness of 2 3 lm); these images were further processed to generate a composite image with Olympus Microsuite software, analysis 3.1 version (Soft Imaging System, Lakewood, CO). The composite images were edited for size, brightness, and contrast using Adobe Photoshop (San Jose, CA). Observation of male reproductive organs Male reproductive organs were dissected in PBS, fixed in 4% paraformaldehyde for 1 2 hours with gentle shaking at 36 The Journal of Comparative Neurology Research in Systems Neuroscience
4 Caspases-dependent neuronal cell death room temperature, washed in PBS (3 5minutes),and mounted with 100% glycerol. Snapshots were taken with a brightfield setting of an Olympus BX61 microscope. TUNEL (terminal deoxynucleotide transferase dutp nick end labeling) assay This assay was performed with a commercial kit (Deadend Fluorometric TUNEL system, Promega, Madison, WI) to detect fragmented DNA in dying neurons following the manufacturer s recommendation. To collect precisely aged prepupae, newly formed white prepupae were taken every 30 minutes and aged on a wet filter paper at 25 C. CNSs dissected from the prepupae were fixed in PBS containing 4% paraformaldehyde overnight at 4 C, and then washed three times with PBS containing 0.1% Triton X- 100 at room temperature. Tissues were transferred into a 0.25-mL conical cup (Fisher Scientific, Pittsburgh, PA) and incubated in equilibration buffer (50 ll) for 10 minutes. Afterward, samples were incubated with a reaction mixture of the equilibrium buffer (45 ll), fluorescein- 12-dUTP (5 ll), and terminal deoxynucleotidyl transferase (1 ll) at 37 C for 1 hour in a dark chamber. The reaction was terminated by rinsing tissues with 2 SSC once for 15 minutes at room temperature and then with PBS (5 5 minutes). Samples were mounted and fluorescent signals were acquired as described above. RT-PCR To detect decay or damm transcripts, total RNA was isolated from a group of 40 adult flies homozygous for w 1118 (control), damm f02209,ordecay d07129 using TRIZOL reagent (Invitrogen, La Jolla, CA). Total RNA was also extracted from 50 dissected adult male reproductive organs including the testes, anterior ejaculatory ducts, testicular ducts, and accessory glands, or from 50 CNSs obtained from both wandering 3rd instar larvae and white prepupae. Total RNA (200 ng, unless indicated otherwise) was added to a one-step reverse-transcription polymerase chain reaction RT-PCR kit (SuperScript: Invitrogen). In each PCR reaction, one of the following sets of primers was included: damm-f (5 0 -CTAACCCAGCGTT GCCGGACGTT) and damm-r (5 0 -TCGCGTCAGCTCTCAA CGGACCC); decay-f (5 0 -TCTCCGAGATCAACGACACGCTC) and decay-r (5 0 -GACGCCCTCCGGCGTGGCAGCT); b-tubulin-f (5 0 -GCAACAACTGGGCCAAGGGTCATTAC) and b-tubulin-r (5 0 -CTTGGCATCGAACATCTGCTGGGTCAG). RESULTS Temporal regulation of the PCD of vcrz neurons In response to a surge of ecdysone hormone toward the end of larval period, a wandering 3rd instar larva (WL3) ceases its movement and initiates puparium formation. The larval cuticle hardens and tans to form the prepupal cuticle, which then separates from the underlying epidermis (apolysis) around 4 6 hours after puparium formation (APF) at 25 C (Fig. 1A) (Yin and Thummel, 2005). At 12 hours APF, a small ecdysone pulse triggers head eversion, a hallmark of pupation. During this early metamorphic period, most larval tissues along with a large number of neurons are removed by PCD (Truman et al., 1993, 1994). To construct a developmental profile of dying neurons in the prepupal CNS, we performed a time-lapse TUNEL analysis. The TUNEL signals in the VNC became apparent around 2 hours APF, peaked between 3 and 8 hours APF, and gradually diminished afterward (Fig. 1B I). Since the signals reflect an accumulation of chromosomal breakdown, a hallmark of apoptotic cell death, peak TUNEL signals are likely to precede a complete removal of these cells. In this aspect, a progressive elimination of the vcrz neurons between 3 and 7 hours APF is noteworthy (Fig. 1J R; see also Choi et al., 2006). Despite unknown identities of most of the dying cells in the VNC, we speculate that underlying PCD mechanism ongoing in the vcrz neurons is likely shared by other doomed neurons during a similar developmental period. Previously, we used lacz reporter as a means to mark doomed vcrz neurons (Choi et al., 2006). These neurons were stained by using X-gal histochemistry; however, this method, albeit rather convenient, proved unable to reveal subtle morphological changes associated with cell death due to its diffusive nature. Thus, as an alternative tool, we employed Crz-IHC to analyze cytological events occurring in the vcrz neurons prior to their death. Consistent with the X-gal histochemistry, Crz-immunoreactive signals progressively disappeared during a period of 3 7 hours APF (Fig. 1M R). Although the disappearance of vcrz neurons was becoming evident at 3 4 hours APF, close inspection of the immunolabeled vcrz neurons revealed cytological signs of PCD much earlier than their actual removal time. In WL3 and white prepupae (0 hours APF), contralaterally projecting axons showed a smooth surface (Fig. 2A,B). Around 1 hour APF, however, the axons began to develop small dense spots, giving rise to a beads-on-string appearance (Fig. 2C), which is a structural hallmark of axonal degeneration (Nikolaev et al., 2009). These spots became more prominent and increased in number by 2 hours APF (Fig. 2D). The somata also displayed an uneven cell surface and budding structures during the same period (Fig. 2E,F). These changes in the vcrz neurons match distinct morphological characteristics of apoptosis (Kerr, 2002; reviewed in Elmore, 2007). Taken together with previous detection of TUNEL signals within vcrz neurons (Choi The Journal of Comparative Neurology Research in Systems Neuroscience 37
5 Lee et al. Figure 1. Time-course events of vcrz neuronal PCD. A: A schematic diagram of major events occurring during early stages of metamorphosis in D. melanogaster. B I: Time-course TUNEL signals in the VNC during early metamorphosis. Horizontal dotted lines indicate an approximate boundary between the thoracic (Th) and abdominal (Ab) ganglia. J R: Progressive elimination of the vcrz neurons indicated by brackets was observed by Crz-immunofluorescence. Overt signs of dying vcrz neurons, such as fragmented neural projections (arrow) and disappearance of vcrz somata (arrowheads), begin to be revealed around 3 hours APF and complete removal of them by 7 hours APF. Numbers indicate hours after puparium formation. Scale bars ¼ 100 lm. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] et al., 2006), we conclude that the death of vcrz neurons is indeed apoptotic. Our data also suggest that degeneration occurs simultaneously in both soma and axon. This is in contrast to the pruning events of persisting larval neurons in which the degeneration is limited to axons and/or dendrites (Schubiger et al., 1998; Lee et al., 2000; Kuo et al., 2005; Williams et al., 2006). To gain insight into the roles of caspases in the apoptotic events of vcrz neurons, we first analyzed the activity of endogenous caspases by expressing CD8-PARP-Venus fusion protein directed by a Crz-gal4. PARP (poly-adpribose polymerase) is a well-characterized substrate for effector caspases and the cleaved PARP (cparp) is readily detectable with a specific antibody (Williams et al., 2006). While expression of the CD8-PARP-Venus in all Crz neurons was clearly visualized by the Venus (YFP) signals (Fig. 3Ai Di), none of these neurons were detected by 38 anti-cparp in larval and white prepupal CNS (Fig. 3A,B). cparp-immunoreactivity was first noticeable in a few vcrz neurons and their projections at 1 hour APF (Fig. 3C), which is coincident with early visible signs of vcrz neuronal degeneration (Fig. 2C). At 2 hours APF, cparp signals were more significant in most vcrz neurons and their projections (Fig. 3D). Importantly, the cparp-immunoreactivity was not observed in a group of the Crzexpressing protocerebral DL neurons (Fig. 3A D), which survive throughout metamorphosis and persist into adulthood (Choi et al., 2005; Lee et al., 2008). Furthermore, coexpression of p35, a versatile caspase inhibitor, completely eliminated cparp-immunoreactivity in the doomed vcrz neurons (data not shown, n ¼ 6). These results together support that endogenous caspases become active within the vcrz neurons shortly after the onset of puparium formation. Simultaneous detection of The Journal of Comparative Neurology Research in Systems Neuroscience
6 Caspases-dependent neuronal cell death Figure 2. Early apoptotic signs observed in the vcrz neurons and their axonal projections. A D: Progressive axonal degeneration during early prepupal development. The axonal projections look sleek and evenly stained prior to the onset of metamorphosis (A,B). Shortly after entry into metamorphic development, they begin to show a discontinuous look and distinct bulges (asterisks) along the axonal tract (C,D). E,F: Somata of the vcrz neurons also lose their integrity and the cell surface takes an increasingly irregular shape and forms apoptotic bodies, as indicated by arrowheads. WL3, wandering third instar larva. Scale bar ¼ 25 lm. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] the cparp in the somata and their axonal projections was also consistent with our earlier description of apoptotic signs, suggesting that caspases act in both subcellular structures to induce synchronous degeneration of an entire neuron. Role of initiator caspases in the PCD of vcrz neurons Given the importance of caspase activities in the timely removal of vcrz neurons, we conducted a comprehensive genetic analysis to define the roles of each caspase. Previously we have shown that dronc plays an important role in the normal course of vcrz death (Choi et al., 2006). Here we further investigated whether dronc functions alone or with other putative initiator caspases. Consistent with our previous data, prepupae homozygous for dronc I24, dronc I29, or hetero-allelic combinations (dronc I24/51 and dronc I29/51 ), all of which are known to be null (Chew et al., 2004; Xu et al., 2005), displayed surviving vcrz neurons at 7 hours APF (Table 1; Fig. 4A). However, these vcrz neurons gradually succumbed to death by 48 hours APF (Table 1, Fig. 4B,C), thus showing that death of the vcrz neurons was markedly delayed, but not prevented in the absence of dronc function. Nonetheless, a noteworthy fact that 25% of vcrz neurons in droncnull mutants undergo normal death by 7 hours APF suggests a role for other initiator caspase(s), besides dronc, for the vcrz PCD. To address this issue, we extended our studies to analyze a possible involvement of other initiator caspases, dredd and strica. Neither dredd-null alleles (dredd D55, dredd L23, and dredd B118 ), nor strica-null (strica 4 ) were able to delay or block the vcrz PCD single-handedly, as no viable vcrz neurons detected at 7 hours APF (Table 2; Fig. 4D). Despite these results, we could not rule out the possibility that strica or dredd functions redundantly with dronc. To determine whether this is the case, we examined double homozygous mutants, strica 4 ; dronc I24 and dredd L23 ; dronc I24/51. Interestingly, while vcrz PCD phenotype in dredd; dronc double mutants is indistinguishable from that in dronc mutants, nearly all vcrz neurons survived in the CNS of strica; dronc double mutant at 7 hours APF (Table 2; Fig. 4E). Such abnormal PCD phenotype is significantly more severe than the one observed in either dronc I24 or strica 4 mutation alone (Tables 1, 2). When strica 4 ; dronc I24 /TM6B was examined, no surviving vcrz neurons were found at 7 hours APF, suggesting that a heterozygosity of dronc is sufficient to compensate the lack of strica function. We also examined triple null mutants lacking all three initiator caspases, dredd B118 ; strica 4 ; dronc I24. This mutant displayed results comparable to that of strica 4 ; dronc I24 double mutant (Table 2; Fig. 4F). From these data together, we conclude that strica plays a minor role that overlaps with dronc s, while dredd has no function in the vcrz neuronal death. Dronc is insensitive to inhibition by p35 in vcrz neurons Baculoviral p35, a broad-spectrum caspase inhibitor, is cleaved by caspases at a specific site, and the cleaved product makes a stable association with a caspase, thereby suppressing its proteolytic activity (reviewed in Clem, 2001). According to a biochemical study, p35 is not recognized by Dronc, thus not cleaved by it. Consistently, cell death induced by dronc overexpression in the retina was shown to be insuppressible by the coexpression of p35 (Hawkins et al., 2000; Meier et al., 2000). These results suggest that inhibitory action of the p35 is mainly on the effector caspases. However, contradictory data were also presented (Quinn et al., 2000). Expression of p35 blocks developmental PCD of vcrz neurons in which Dronc plays a major role (Table 1; see The Journal of Comparative Neurology Research in Systems Neuroscience 39
7 Lee et al. Figure 3. in vivo detection of caspase activity using cleaved PARP (cparp) as an indicator of caspase action. A D: Progressive activation of caspases in the vcrz neurons. Shortly after the onset of metamorphosis, cparp-immunoreactivity is evident in the somata and projections (C,D). Note that no cparp was detected in a brain Crz neuronal group (DL) that persists into adulthood. Ai Di: Venus (YFP) expression in the samples corresponding to A D. A magenta-green copy of this figure is available as a supporting figure. Scale bar ¼ 100 lm. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] TABLE 1. Time-course vcrz PCD in dronc Mutants Genotype 7 h APF 16 h APF 24 h APF 48 h APF Wildtype 0 (20) 0 (20) 0 (16) nd Crz-gal4 x UAS-p35 16 (16) 16 (8) 16 (5) 16 (5) dronc I (9) (3) (3) 0 (1) dronc I (3) (4) (3) (6) dronc I24/ (8) (13) (7) (3) dronc I29/ (10) (6) nd (3) Values indicate mean number of vcrz neurons 6 SEM. (n) number of specimens; nd, not determined. also Choi et al., 2006). To test if p35 is able to suppress Dronc-induced death of vcrz neurons in the larval CNS in which the endogenous PCD program is not yet operative, the expression of dronc either alone or with p35 was directed by the Crz-gal4 and then Crz-immunoreactivity was performed. As expected, dronc overexpression killed all vcrz neurons but, unexpectedly, none of the protocerebral corazonergic neurons (Fig. 5A vs. B). Coexpression of the p35 did not prevent such dronc-induced killing of vcrz neurons (Fig. 5C), thus supporting that Droncinduced ectopic killing is insensitive to p35 inhibition. Our foregoing data suggest that the mechanisms of induced death by overexpressed dronc differ from those of normal death by endogenous dronc. In the latter case, main function of the Dronc, as an initiator caspase, is to activate effector caspases, which are effectively blocked by ectopic p35 expression. The former case, however, unlikely involves activation of effector caspases, because Diap1, an inhibitor of apoptosis protein, is likely to form an inhibitory complex with effector caspases in the larval tissues as the death program has not yet been initiated at this stage (Zachariou et al., 2003; Yan et al., 2004). Rather, overproduced Dronc may act like an effector caspase. In line with this notion, a mammalian Dronc homolog, caspase 9, was shown to directly degrade vimentin, a type of intermediate filament (Nakanishi et al., 2001). These results raise the possibility that overproduced Dronc acts like effector caspases to process cytoplasmic 40 The Journal of Comparative Neurology Research in Systems Neuroscience
8 Caspases-dependent neuronal cell death TABLE 2. vcrz PCD in the Mutants of Initiator Caspases Genotype 7 h APF 16 h APF dredd L23 0 (5) nd dredd B118 0 (3) nd dredd D55 0 (3) nd dredd L23 ; dronc I24/ (8) (5) strica 4 0 (4) nd strica 4 ; dronc I24 /TM6C 0 (3) 0 (2) strica 4 ; dronc I (6) (3) dredd B118 ; strica 4 ; dronc I (16) (5) Values indicate mean number of vcrz neurons 6 SEM. (n) number of specimens; nd, not determined. Figure 4. Roles of initiator caspases for the vcrz PCD. A C: Delayed vcrz neuronal PCD in dronc I24 null mutant CNS. D: Normal PCD in a strica-null mutant at 7 hours APF. E,F: Strong but incomplete suppression of vcrz PCD was observed at 7 hours APF in strica 4 ; dronc I24 double mutant (E), and dredd B118 ; strica 4 ; dronc I24 triple mutant (F). See also Tables 1 and 2. Scale bar ¼ 50 lm. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] proteins, leading to the cell death. Since Dronc is insensitive to p35, ectopic expression of p35 is unable to block Dronc-induced cell death. Role of effector caspases Since Ice and Dcp-1 are the best-characterized effector caspases for their proapoptotic functions in Drosophila and they are sensitive to inhibition by p35, it is likely that these two are the primary executioners for the vcrz PCD. Thus, we determined vcrz PCD in the mutant lacking dcp-1 or ice function. In a dcp-1-null mutant (dcp-1 Prev1 ), an average of (mean 6 SEM, n ¼ 19) vcrz somata remained detectable at 7 hours APF (Fig. 6A), but none did at 16 hours APF (n ¼ 17, Fig. 6B). Moreover, the general morphology of the vcrz neurons at 7 hours APF was comparable to those of wildtype at 4 5 hours APF (Fig. 1C), indicating that the PCD has been slowed down in the absence of dcp-1 function. These results suggest that Dcp-1 is necessary but not a sole effector caspase for the degeneration of the vcrz neurons. Next, we determined the death of vcrz neurons in an ice-null allele, ice D1. Remarkably, we found all 16 vcrz neurons remained at 7 hours APF (n ¼ 16, Fig. 6C); however, the surviving neurons showed budding structures (Fig. 6D) that were somewhat similar to what we described earlier for dying wildtype vcrz neurons at 1 2 hours APF (Fig. 2E,F). Such morphological similarities led us to wonder whether PCD of vcrz neurons is delayed in the absence of ice function. Indeed, the number of vcrz neurons was progressively reduced to at hours APF (n ¼ 4, Fig. 6E) and at 24 hours APF (n ¼ 6, Fig. 6F). Delayed death in the absence of either dcp-1 or ice implies that these two effector caspases act cooperatively to draw a full destructive power, ensuring the death of all vcrz neurons in a timely manner. To test this hypothesis, we performed Crz-IHC in a double null mutant, dcp- 1 Prev1 ; ice D1. Intriguingly, all 16 vcrz neurons remained detectable at 7 hours APF (n ¼ 5, Fig. 6G) and even at 16 hours APF (n ¼ 2, Fig. 6H). Although developmental arrest and lethality of the double mutant did not permit us to examine surviving vcrz neurons beyond this stage, we can clearly infer from our results that both dcp-1 and ice are necessary and sufficient for the vcrz death. In addition, comparisons in the number of surviving vcrz neurons and their structural altercations from different developmental stages between dcp-1 Prev1 and ice D1 mutants suggest that ice is a major player in the execution of vcrz death, while dcp-1 plays a lesser but nonetheless essential role. Autonomous effects of dcp-1 and ice Since dcp-1 Prev1 ; ice D1 double mutants display developmental arrest around the mid-pupal stage, we wanted to confirm that the suppression of vcrz PCD in the mutant CNS does not result from the systemic developmental arrest. To investigate an autonomous role of dcp-1 and ice, we employed a targeted knockdown of these caspases using a micro-rna-based silencing tool (mi-rna) (Chen et al., 2006, 2007). For this, UAS-mi- The Journal of Comparative Neurology Research in Systems Neuroscience 41
9 Lee et al. Figure 5. p35-insensitive Dronc function. A: Wildtype (WT) Crz-immunoreactivity in the larval CNS. Dorsal lateral (DL) neurons in the brain are indicated by arrowheads. B: Expression of dronc by Crz-gal4 caused premature death of the vcrz neurons, while DL neurons remained alive (arrowheads). Genotype: UAS-dronc/þ; Crz-gal4/þ. C: Coexpression of p35 did not prevent dronc-induced death of vcrz neurons. Genotype: UAS-dronc/UAS-p35; Crz-gal4/þ. Scale bar ¼ 100 lm. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] Figure 6. Effect of a dcp-1 or ice null mutation on vcrz PCD. A,B: Surviving vcrz neurons in dcp-1 Prev1 at 7 hours APF (A), and at 16 hours APF (B). C F: Surviving vcrz neurons and their projections in ice D1 mutant at indicated timepoints. The boxed area in (C) was recaptured with a higher magnification (D). Blebbings in the somata of the surviving vcrz neurons are indicated by arrowheads. G,H: Complete rescue of doomed vcrz neurons in dcp-1 Prev1 ; ice D1 double mutant CNS. Severe tissue deformity seen at 16 hours APF (H) is due to the systemic developmental arrest of the double mutant. Scale bars ¼ 50 lm ina;25lm in D. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] 42 The Journal of Comparative Neurology Research in Systems Neuroscience
10 Caspases-dependent neuronal cell death TABLE 3. Autonomous Apoptotic Roles of dcp-1 and ice Crz-gal4 1X 2X mi-rna 7 h APF 7 h APF 16 h APF mi-ice (7) (5) nd mi-dcp (6) (7) nd mi-iceþdcp (9) (4) (2) Values indicate mean number of vcrz neurons 6 SEM. (n) number of specimens; nd, not determined. RNA lines for dcp-1 and ice, which are referred to as UAS-mi-dcp-1 and UAS-mi-ice, respectively, were crossed to a single Crz-gal4 (1) or a double Crz-gal4 line (2) to alter the dosage of mi-rna expression. Remarkably, the expression of mi-dcp-1 (Fig. 7A,B) and mi-ice (Fig. 7C) blocked vcrz PCD to the extent comparable to those obtained from each corresponding null mutation. Expression of mi-iceþdcp-1 also showed a similar level of cell survival to that observed with the dcp-1/ice double mutation (Fig. 7D F; Table 3), providing clear evidence for the cell-autonomous roles of dcp- 1 and ice. Figure 7. Cell autonomous function of dcp-1 and ice. A,B: The death of vcrz neurons is rescued partially by mi-dcp-1 expression driven by 1 Crz-gal4 (A) and 2 Crz-gal4 (B) at 7 hours APF. C: Complete rescue of vcrz cell death by expressing mi-ice by 1 Crz-gal4 at 7 hours APF. D F: Coexpression of mi-dcp-1 and mi-ice (mi-dcp-1þice). The death of vcrz neurons is completely blocked even at 16 hours APF (F). G,H: Complete suppression of the vcrz PCD in dcp-1 Prev1 ; dronc I29 mutant. See also tables for the quantitative data. Scale bars ¼ 100 lm ina;50lm inf. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] Dronc downstream caspases It is currently believed that initiator caspases, such as dronc, play a proapoptic role through the activation of effector caspases, thus placing both ice and dcp-1 in the downstream of dronc (Hawkins et al., 2000). Our foregoing data, however, do not robustly support this canonical model, as the rescue of the vcrz PCD is greater in icenull mutant than in either dronc or dronc/strica-double mutation. To test further if dronc is the activator of dcp-1, we analyzed a mutant null for both dcp-1 and dronc (dcp-1 Prev1 ; dronc I24 and dcp-1 Prev1 ; dronc I29 ). If dcp-1 is an obligatory downstream of dronc, one can expect the defective PCD phenotype of the double mutants to be similar to those of dronc single mutants. Surprisingly, we found a full rescue of vcrz PCD by dcp-1/dronc double mutation at both 7 hours (n ¼ 6, Fig. 7G) and 16 hours APF (n ¼ 2, Fig. 7H), compared to a partial rescue by dronc single mutations (Fig. 4A,B). Based on these results, we propose that an activation of Ice and Dcp-1 requires a novel pathway in addition to the Dronc and Strica. No roles found for damm and decay in vcrz death Our sequence analysis of the damm f transgenic line revealed that a piggybac transposon is inserted into the 3rd intron and carries a deletion of 4 bp (TCAA) in The Journal of Comparative Neurology Research in Systems Neuroscience 43
11 Lee et al. Figure 8. Characterization of damm PB and d07129 mutants. A: The sequence shows partial third intron (lowercase letters) and fourth exon (capitals) of damm. A triangle indicates the damm PB insertion in a 3 0!5 0 direction. Bold letters (tcaa) designate a 4-bp deletion. B: damm expression assessed by RT-PCR. damm expression was not detected in damm PB (boxed). Primers for the RT-PCR were derived from the 3rd and 4th exons of the damm. The same primers produced slightly larger size of genomic product due to the presence of the 50-bp 3rd intron. b-tubulin was used as a control. C: Lack of expression of both damm and decay in the CNS of wildtype (w 1118 ) wandering 3rd instar larvae and white prepupae. D,E: PCD of vcrz neurons is unaffected by a damm PB insertion (D) or by mi-decay expression driven by 2 Crz-gal4 (E) at 7 hours APF. F: Expression of decay assessed by RT-PCR. Decay RT-PCR product was detected in the male body (B) of w 1118, but not in the reproductive organs (R). However, decay expression was detected in both body as well as reproductive organs of d07129 homozygous males (arrowhead). Scale bar ¼ 100 lm in D (applies to E). [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.] which the last A is part of the splicing acceptor site (AG) (Fig. 8A). As a result, we presume that the damm f allele suffers a splicing error. Consistent with this prediction, RT-PCR using a set of primers specific to the 3rd and 4th exons failed to produce PCR products from the homozygous mutant (for short, damm PB in Fig. 8B), while the same primers produced damm-specific 252-bp products from control w 1118 adults. This result indicates that damm f is likely a null or at least a strong hypomorphic allele. Nevertheless, damm f homozygous adult flies appear normal, suggesting that damm is not vital for fly development. RT-PCR was unable to detect damm transcripts in the CNS of both late 3rd instar larvae and white prepupae of w 1118 (Fig. 8C) and vcrz neurons underwent normal PCD in the homozygous damm f mutants (n ¼ 7, Fig. 8D). The expression of mi-damm by Crz-gal4 1 (n ¼ 5) or 2 (n ¼ 12) also did not alter the PCD of vcrz neurons (data not shown). These data support a lack of damm function in the early metamorphosing CNS including the death of vcrz neurons. Like damm, decay-null mutant was reported to be healthy and fertile (Kondo et al., 2006). Due to a patent issue, we were unable to test this mutant; instead, we employed mi-rna-mediated knockdown of decay. Expression of mi-decay by Crz-gal4 2 did not affect the normal course of vcrz PCD (n ¼ 13, Fig. 8E). Moreover, decay expression, as determined by RT-PCR, was clearly detectable in the body of w 1118 adults (Fig. 8F), but not in the CNS of WL3 and white prepupae (Fig. 8C), leading us to speculate that decay has no particular role in the CNS. As a putative decay mutant allele, we examined P{XP}d07129 (for short, d07129) homozygous flies, which, as we confirmed, contain a P-element in 398 bp upstream from the transcription start site of decay. Although the homozygous d07129 animals develop normally and PCD of vcrz neurons was unaffected by this allele (n ¼ 7, data not shown), males were reproductively abnormal, ranging from sterile to weakly fertile. RT-PCR result showed no detectable expression of decay in the wildtype male reproductive organs, implying the lack of endogenous decay function in this tissue. Interestingly, however, decay expression was clearly observed in the same tissues of homozygous d07129 males(arrowheadinfig.8f).suchmisexpression of decay is likely due to the insertion of a P{XP} element containing two UAS sequences that were intended to induce ectopic expression of a nearby gene in a Gal4-dependent manner (Thibault et al., 2004). It is not uncommon that UAS activity, depending on the genomic location, is not silent even in the absence of Gal4 (Markstein et al., 2008). Thus, we speculate that decay s upstream regulatory region is affected by the UAS sequence, resulting in the misexpression of decay in the male reproductive organs without thepresenceofgal4. To explore whether male sterility of the d07129 is due to abnormal reproductive activity, we examined the 44 The Journal of Comparative Neurology Research in Systems Neuroscience
12 Caspases-dependent neuronal cell death Figure 9. Defective reproductive organs in d07129 homozygous males. Arrowheads indicate joints of the seminal vesicles (SV) with testes (T) or ejaculatory duct (ED). A: Distended SV reflects massive amounts of mature sperms stored in this organ in wildtype (n ¼ 4). B: An area indicated by a box in (A) is magnified. C: Reproductive organs of the decay d07129 mutant. D: A magnified image of the dotted box in (C). The SV of the d07129 male is slender and transparent due to no or very little amounts of sperm stored (n ¼ 4). The magnified images are rotated to show better anatomical comparison. AG, Accessory glands. Scale bars ¼ 100 lm. morphology of the male reproductive organs. The testes of d07129 males looked relatively normal but the accessory glands and anterior part of the ejaculatory duct of the mutant males were substantially smaller than the wildtype counterparts (Fig. 9A vs. C). In addition, the seminal vesicles that store mature sperm were slender and transparent, a likely result from the near-absence of stored sperms (Fig. 9B vs. D). Thus, it is likely that decay misexpression in the d07129 male reproductive organs is causally associated with an abnormal sperm production, perhaps as a result of an inappropriate male germ cell death. DISCUSSION Major changes in the mode of locomotion from larval (peristaltic crawling) to adult (walking and flying) stages in holometabolous insects requires the degeneration of obsolete larval motor neurons followed by de novo generation of adult-specific motor neurons. Notably, a majority of the motor neurons innervating larval abdominal muscles from the abdominal ganglia are eliminated during early metamorphosis in a moth (reviewed in Weeks, 2003). Similar removal of larval motor neurons is expected in Drosophila. Consistently, our results revealed progressively increasing TUNEL signals, particularly in the VNC shortly after the entry into metamorphosis in Drosophila, indicating that neuronal PCD plays a significant role in the remodeling of this part of the CNS. In addition to the motor neurons, certain larva-specific interneurons including vcrz neurons are also targets for PCD during this early phase of metamorphosis (Weeks, 2003; Choi et al., 2006; Lee et al., 2008). Despite these studies, it has been poorly understood how such neuronal PCD is executed. Using vcrz neurons as a model system and various neurogenetic tools, we revealed intricate actions of initiator and effector caspases in the doomed vcrz neurons. Roles of dronc and strica for the vcrz neuronal death Among three putative initiator caspases, we found dronc as a major one, while strica plays a minor role that overlaps with dronc. None of our evidence is in favor of the proapoptotic roles of dredd in the death of vcrz neurons. According to a conventional model, the initiators activate downstream effectors, which then carry out the cellular degeneration process. However, normal PCD of a few vcrz neurons still occurs even in the absence of all three initiators, raising the possibility that there is either a yet-unidentified initiator The Journal of Comparative Neurology Research in Systems Neuroscience 45
13 Lee et al. caspase in the Drosophila genome or a novel pathway capable of activating effector caspases without involving these three initiator caspases. This notion was also supported by our genetic data that an ice mutation alone shows a greater level of suppression of the vcrz PCD than either a dronc alone or a dronc/strica double mutation. Likewise, a dcp-1/dronc double mutation displayed a greater inhibition of vcrz PCD than did a dronc or a dronc/ strica double mutation. Results similar to ours have been reported for different tissues. For instance, a triple dredd/ strica/dronc mutation did not completely stop oogenesisassociated PCD (Baum et al., 2007). Studies on the larval midgut also indicated initiator-independent activation of effector caspases, although the caspases do not seem to cause the PCD of this tissue (Denton et al., 2009). Dronc-independent cell death was also observed in some embryonic cells (Xu et al., 2005). These independent lines of evidence found in various tissue types strongly support the idea that Drosophila has an unconventional activation mode of effector caspases. This possibility warrants further investigation. Roles of effector caspases Thus far, Ice and Dcp-1, two closely related effector caspases, are known to play major functions in the PCD of diverse tissues in Drosophila. However, their roles seem to vary in a tissue-specific manner. For instance, PCD of nurse cells during late oogenesis is slightly reduced in the absence of either ice or dcp-1 function alone, while the PCD is additively suppressed by the lack of both, implicating their cooperative or independent actions in this tissue type (Baum et al., 2007). In developing embryos, global embryonic cell death is nearly unaffected by a dcp-1 mutation, but substantially reduced in ice mutants (Kondo et al., 2006; Xu et al., 2006). The extent of PCD is similar to or slightly lower in dcp-1/ice double mutant embryos, suggesting a predominant role for ice with a minor redundant dcp-1 function during the embryonic PCD. In the imaginal discs of the developing eye, a great reduction in the cell death is observed in either ice or dcp-1 mutants, while the PCD is completely absent in dcp-1/ice mutants (Kondo et al., 2006). These data imply largely overlapping, but cooperative roles played by these two death enzymes for eye development. By comparison, the PCD of the larval salivary glands is surprisingly normal in an ice mutant (Muro et al., 2006), although this event is significantly impaired in a dronc-null mutant (Daish et al., 2004). Thus, it remains to be seen whether dronc s sole benefactor is dcp-1 for the salivary gland cell death. On a different occasion, ice alone is likely to be sufficient for the irradiation-induced cell death (Kondo et al., 2006; Muro et al., 2006). These studies together demonstrate that dcp-1 and ice are essential effector caspases for the PCD of various types of tissues, but required differently in a tissue type-dependent manner. At first glance, ice seemed to be sufficient for vcrz neuronal PCD, as all vcrz neurons remained at 7 hours APF in ice-null mutants. However, the surviving neurons were progressively eliminated as pupal development proceeded, presumably via the action of dcp-1. This is supported by a marginal suppression of vcrz PCD in the absence of dcp-1 function, and a complete block of death in the tissue lacking both dcp-1 and ice functions. Therefore, PCD of vcrz neurons requires the cooperative action of Ice and Dcp-1. Such a joint force seems to be essential for the timely elimination of neurons in the rapidly developing CNS during early metamorphosis, otherwise delayed removal of juvenile neurons could interfere with the proper establishment and elaboration of the adult neural circuitries. Tight temporal as well as spatial regulation of the levels of active caspases in work is critical for proper postembryonic CNS development. For the latter type of regulation, localization of active caspases in neurites is important for the pruning of neuronal processes, leaving the soma intact. Such limited degeneration of persisting larval neurons is required for their respecification in order to make new synaptic contacts during metamorphic development (reviewed in Luo and O Leary, 2005; Saxena and Caroni, 2007). This is in contrast to global activation of caspases in the doomed neurons (this study). Therefore, it appears that neurons are preprogrammed to provide a minimal optimum of total caspase activity to bring about the self-degeneration of a whole cell or specific subcellular structures within a narrow developmental window. ACKNOWLEDGMENTS We thank K. McCall for the kind supply of dcp-1 and double and triple caspase mutant stocks. We thank I. Muro for ice null mutant, D.W. Williams for a UAS-CD8- PARP-Venus, B. Lemaitre for dredd mutants, A. Bergmann for dronc mutant stocks, H. Richardson for a UAS-dronc, and P. Valvo for a kind gift of a fly food ingredient. We also thank B.D. McKee, J. Hall, and M. Labrador for helpful discussion and comments on the article. LITERATURE CITED Baum JS, Arama E, Steller H, McCall K The Drosophila caspases Strica and Dronc function redundantly in programmed cell death during oogenesis. Cell Death Differ 14: Chen C-H, Guo M, Hay BA Identifying microrna regulators of cell death in Drosophila. Methods Mol Biol 342: Chen C-H, Huang H, Ward CM, Su JT, Schaffer LV, Guo M, Hay BA A synthetic maternal-effect selfish genetic element drives population replacement in Drosophila. Science 316: Chew S-K, Akdemir F, Chen P, Lu W-J, Mills K, Daish T, Kumar S, Rodriguez A, Abrams JM The apical caspase 46 The Journal of Comparative Neurology Research in Systems Neuroscience
Characterization of the apoptotic functions of the HID hmolog isolated from Megaselia scalaris
University of Tennessee, Knoxville Trace: Tennessee Research and Creative Exchange University of Tennessee Honors Thesis Projects University of Tennessee Honors Program 5-2013 Characterization of the apoptotic
More informationDrosophila Apoptosis and the Regulation of the Caspase Cascade
Drosophila Apoptosis and the Regulation of the Caspase Cascade Kate Stafford March 18, 2005 Abstract The caspase cascade in Drosophila is controlled primarily by DIAP1 (Drosophila inhibitor of apoptosis),
More informationChapter 4 Evaluating a potential interaction between deltex and git in Drosophila: genetic interaction, gene overexpression and cell biology assays.
Evaluating a potential interaction between deltex and git in Drosophila: genetic interaction, gene overexpression and cell biology assays. The data described in chapter 3 presented evidence that endogenous
More informationMidterm 1. Average score: 74.4 Median score: 77
Midterm 1 Average score: 74.4 Median score: 77 NAME: TA (circle one) Jody Westbrook or Jessica Piel Section (circle one) Tue Wed Thur MCB 141 First Midterm Feb. 21, 2008 Only answer 4 of these 5 problems.
More informationSupplementary Materials for
www.sciencesignaling.org/cgi/content/full/6/301/ra98/dc1 Supplementary Materials for Regulation of Epithelial Morphogenesis by the G Protein Coupled Receptor Mist and Its Ligand Fog Alyssa J. Manning,
More informationRole of Mitochondrial Remodeling in Programmed Cell Death in
Developmental Cell, Vol. 12 Supplementary Data Role of Mitochondrial Remodeling in Programmed Cell Death in Drosophila melanogaster Gaurav Goyal, Brennan Fell, Apurva Sarin, Richard J. Youle, V. Sriram.
More informationCharacterization of head involution defective (hid) as a pro-apoptotic gene in Megasalia scalaris
University of Tennessee, Knoxville Trace: Tennessee Research and Creative Exchange University of Tennessee Honors Thesis Projects University of Tennessee Honors Program 5-2015 Characterization of head
More informationProgrammed cell death mechanisms of identifiable peptidergic neurons in Drosophila melanogaster
RESEARCH ARTICLE 2223 Development 133, 2223-2232 (2006) doi:10.1242/dev.02376 Programmed cell death mechanisms of identifiable peptidergic neurons in Drosophila melanogaster Youn-Jeong Choi, Gyunghee Lee
More informationNature Biotechnology: doi: /nbt Supplementary Figure 1. Overexpression of YFP::GPR-1 in the germline.
Supplementary Figure 1 Overexpression of YFP::GPR-1 in the germline. The pie-1 promoter and 3 utr were used to express yfp::gpr-1 in the germline. Expression levels from the yfp::gpr-1(cai 1.0)-expressing
More informationSupporting Information
Supporting Information Cao et al. 10.1073/pnas.1306220110 Gram - bacteria Hemolymph Cytoplasm PGRP-LC TAK1 signalosome Imd dfadd Dredd Dnr1 Ikk signalosome P Relish Nucleus AMP and effector genes Fig.
More informationCell Death & Trophic Factors II. Steven McLoon Department of Neuroscience University of Minnesota
Cell Death & Trophic Factors II Steven McLoon Department of Neuroscience University of Minnesota 1 Remember? Neurotrophins are cell survival factors that neurons get from their target cells! There is a
More informationBaz, Par-6 and apkc are not required for axon or dendrite specification in Drosophila
Baz, Par-6 and apkc are not required for axon or dendrite specification in Drosophila Melissa M. Rolls and Chris Q. Doe, Inst. Neurosci and Inst. Mol. Biol., HHMI, Univ. Oregon, Eugene, Oregon 97403 Correspondence
More informationSUPPLEMENTARY INFORMATION
Supplementary Discussion Rationale for using maternal ythdf2 -/- mutants as study subject To study the genetic basis of the embryonic developmental delay that we observed, we crossed fish with different
More informationSystematic in vivo RNAi analysis of putative components of the Drosophila cell death machinery Introduction UNCORRECTED PROOF
(2006) 00, 1 12 & 2006 Nature Publishing Group All rights reserved 1350-9047/06 $30.00 www.nature.com/cdd Systematic in vivo RNAi analysis of putative components of the Drosophila cell death machinery
More informationThe Drosophila caspase Ice is important for many apoptotic cell deaths and for spermatid individualization, a nonapoptotic process
RESEARCH ARTICLE 3305 Development 133, 3305-3315 (2006) doi:10.1242/dev.02495 The Drosophila caspase Ice is important for many apoptotic cell deaths and for spermatid individualization, a nonapoptotic
More informationChapter 18 Lecture. Concepts of Genetics. Tenth Edition. Developmental Genetics
Chapter 18 Lecture Concepts of Genetics Tenth Edition Developmental Genetics Chapter Contents 18.1 Differentiated States Develop from Coordinated Programs of Gene Expression 18.2 Evolutionary Conservation
More informationSegment boundary formation in Drosophila embryos
Segment boundary formation in Drosophila embryos Development 130, August 2003 Camilla W. Larsen, Elizabeth Hirst, Cyrille Alexandre and Jean Paul Vincent 1. Introduction: - Segment boundary formation:
More informationBypass and interaction suppressors; pathway analysis
Bypass and interaction suppressors; pathway analysis The isolation of extragenic suppressors is a powerful tool for identifying genes that encode proteins that function in the same process as a gene of
More informationSUPPLEMENTARY INFORMATION
doi:10.1038/nature10923 Supplementary Figure 1 Ten-a and Ten-m antibody and cell type specificities. a c, Representative single confocal sections of a Drosophila NMJ stained with antibodies to Ten-a (red),
More informationSUPPLEMENTARY INFORMATION
med!1,2 Wild-type (N2) end!3 elt!2 5 1 15 Time (minutes) 5 1 15 Time (minutes) med!1,2 end!3 5 1 15 Time (minutes) elt!2 5 1 15 Time (minutes) Supplementary Figure 1: Number of med-1,2, end-3, end-1 and
More informationChapter 11. Development: Differentiation and Determination
KAP Biology Dept Kenyon College Differential gene expression and development Mechanisms of cellular determination Induction Pattern formation Chapter 11. Development: Differentiation and Determination
More informationNature Neuroscience: doi: /nn.2662
Supplementary Figure 1 Atlastin phylogeny and homology. (a) Maximum likelihood phylogenetic tree based on 18 Atlastin-1 sequences using the program Quicktree. Numbers at internal nodes correspond to bootstrap
More informationExam 1 ID#: October 4, 2007
Biology 4361 Name: KEY Exam 1 ID#: October 4, 2007 Multiple choice (one point each) (1-25) 1. The process of cells forming tissues and organs is called a. morphogenesis. b. differentiation. c. allometry.
More informationHonors Biology Reading Guide Chapter 11
Honors Biology Reading Guide Chapter 11 v Promoter a specific nucleotide sequence in DNA located near the start of a gene that is the binding site for RNA polymerase and the place where transcription begins
More informationUnicellular: Cells change function in response to a temporal plan, such as the cell cycle.
Spatial organization is a key difference between unicellular organisms and metazoans Unicellular: Cells change function in response to a temporal plan, such as the cell cycle. Cells differentiate as a
More informationMechanism of Dronc activation in Drosophila cells
Research Article 5035 Mechanism of Dronc activation in Drosophila cells Israel Muro*, Kristin Monser* and Rollie J. Clem Molecular, Cellular, and Developmental Biology Program, Division of Biology, Ackert
More informationIllegitimate translation causes unexpected gene expression from on-target out-of-frame alleles
Illegitimate translation causes unexpected gene expression from on-target out-of-frame alleles created by CRISPR-Cas9 Shigeru Makino, Ryutaro Fukumura, Yoichi Gondo* Mutagenesis and Genomics Team, RIKEN
More informationSolutions to Problem Set 4
Question 1 Solutions to 7.014 Problem Set 4 Because you have not read much scientific literature, you decide to study the genetics of garden peas. You have two pure breeding pea strains. One that is tall
More informationBIS &003 Answers to Assigned Problems May 23, Week /18.6 How would you distinguish between an enhancer and a promoter?
Week 9 Study Questions from the textbook: 6 th Edition: Chapter 19-19.6, 19.7, 19.15, 19.17 OR 7 th Edition: Chapter 18-18.6 18.7, 18.15, 18.17 19.6/18.6 How would you distinguish between an enhancer and
More informationSUPPLEMENTARY INFORMATION
DOI: 10.1038/ncb3267 Supplementary Figure 1 A group of genes required for formation or orientation of annular F-actin bundles and aecm ridges: RNAi phenotypes and their validation by standard mutations.
More informationDrosophila IAP1-mediated ubiquitylation controls activation of the initiator caspase DRONC independent of protein degradation
University of Massachusetts Medical School escholarship@umms Molecular, Cell and Cancer Biology Publications Molecular, Cell and Cancer Biology 9-1-2011 Drosophila IAP1-mediated ubiquitylation controls
More informationreaper is required for neuroblast apoptosis during Drosophila development
Development 129, 1467-1476 (2002) Printed in Great Britain The Company of Biologists Limited 2002 DEV3594 1467 reaper is required for neuroblast apoptosis during Drosophila development Christian Peterson
More information18.4 Embryonic development involves cell division, cell differentiation, and morphogenesis
18.4 Embryonic development involves cell division, cell differentiation, and morphogenesis An organism arises from a fertilized egg cell as the result of three interrelated processes: cell division, cell
More informationLecture 10: Cyclins, cyclin kinases and cell division
Chem*3560 Lecture 10: Cyclins, cyclin kinases and cell division The eukaryotic cell cycle Actively growing mammalian cells divide roughly every 24 hours, and follow a precise sequence of events know as
More informationMolecular Developmental Physiology and Signal Transduction
Prof. Dr. J. Vanden Broeck (Animal Physiology and Neurobiology - Dept. of Biology - KU Leuven) Molecular Developmental Physiology and Signal Transduction My Research Team Insect species under study +
More informationHoward Hughes Medical Institute and Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
Both the Caspase CSP-1 and a Caspase-Independent Pathway Promote Programmed Cell Death in Parallel to the Canonical Pathway for Apoptosis in Caenorhabditis elegans Daniel P. Denning, Victoria Hatch, H.
More informationLecture 7. Development of the Fruit Fly Drosophila
BIOLOGY 205/SECTION 7 DEVELOPMENT- LILJEGREN Lecture 7 Development of the Fruit Fly Drosophila 1. The fruit fly- a highly successful, specialized organism a. Quick life cycle includes three larval stages
More informationChapter 18 Regulation of Gene Expression
Chapter 18 Regulation of Gene Expression Differential gene expression Every somatic cell in an individual organism contains the same genetic information and replicated from the same original fertilized
More information1. Draw, label and describe the structure of DNA and RNA including bonding mechanisms.
Practicing Biology BIG IDEA 3.A 1. Draw, label and describe the structure of DNA and RNA including bonding mechanisms. 2. Using at least 2 well-known experiments, describe which features of DNA and RNA
More informationAxis Specification in Drosophila
Developmental Biology Biology 4361 Axis Specification in Drosophila November 2, 2006 Axis Specification in Drosophila Fertilization Superficial cleavage Gastrulation Drosophila body plan Oocyte formation
More informationInsect Structure Function & Physiology
Insect Structure Function & Physiology BIOL3238 Ametaboly Primitive developmental pattern. The only major change from instar to instar is increased size. Multiple adult moults. Found in the orders Zygentoma
More informationSupplementary Figure 1. Nature Genetics: doi: /ng.3848
Supplementary Figure 1 Phenotypes and epigenetic properties of Fab2L flies. A- Phenotypic classification based on eye pigment levels in Fab2L male (orange bars) and female (yellow bars) flies (n>150).
More informationIntroduction. Gene expression is the combined process of :
1 To know and explain: Regulation of Bacterial Gene Expression Constitutive ( house keeping) vs. Controllable genes OPERON structure and its role in gene regulation Regulation of Eukaryotic Gene Expression
More informationSUPPLEMENTARY INFORMATION
SUPPLEMENTARY INFORMATION doi:10.1038/nature12791 Supplementary Figure 1 (1/3) WWW.NATURE.COM/NATURE 1 RESEARCH SUPPLEMENTARY INFORMATION Supplementary Figure 1 (2/3) 2 WWW.NATURE.COM/NATURE SUPPLEMENTARY
More informationDevelopmental genetics: finding the genes that regulate development
Developmental Biology BY1101 P. Murphy Lecture 9 Developmental genetics: finding the genes that regulate development Introduction The application of genetic analysis and DNA technology to the study of
More informationFollow this and additional works at: Part of the Medical Sciences Commons
Bucknell University Bucknell Digital Commons Master s Theses Student Theses 2010 The overexpression of homeotic complex gene Ultrabithorax in the post-embryonic neuronal lineages of the ventral nervous
More informationFig. S1. Expression pattern of moody-gal4 in third instar. Maximum projection illustrating a dissected moody-gal4>ngfp L3 larva stained for Repo
Fig. S1. Expression pattern of moody-gal4 in third instar. Maximum projection illustrating a dissected moody-gal4>ngfp L3 larva stained for Repo (magenta), Fas2 (blue) and GFP (green) in overview (A) and
More informationSupplementary Figure 1: Mechanism of Lbx2 action on the Wnt/ -catenin signalling pathway. (a) The Wnt/ -catenin signalling pathway and its
Supplementary Figure 1: Mechanism of Lbx2 action on the Wnt/ -catenin signalling pathway. (a) The Wnt/ -catenin signalling pathway and its transcriptional activity in wild-type embryo. A gradient of canonical
More informationCells. Steven McLoon Department of Neuroscience University of Minnesota
Cells Steven McLoon Department of Neuroscience University of Minnesota 1 Microscopy Methods of histology: Treat the tissue with a preservative (e.g. formaldehyde). Dissect the region of interest. Embed
More informationpurpose of this Chapter is to highlight some problems that will likely provide new
119 Chapter 6 Future Directions Besides our contributions discussed in previous chapters to the problem of developmental pattern formation, this work has also brought new questions that remain unanswered.
More information2. Which of the following are NOT prokaryotes? A) eubacteria B) archaea C) viruses D) ancient bacteria
1. Which of the following statements is FALSE? A) Errors in chromosome separation are rarely a problem for an organism. B) Errors in chromosome separation can result in a miscarriage. C) Errors in chromosome
More informationSupporting Online Material for
www.sciencemag.org/cgi/content/full//576/65/dc Supporting Online Material for Evolution of a Polyphenism by Genetic Accommodation Yuichiro Suzuki* and H. Frederik Nijhout *To whom correspondence should
More informationSUPPLEMENTARY INFORMATION
doi:10.1038/nature11589 Supplementary Figure 1 Ciona intestinalis and Petromyzon marinus neural crest expression domain comparison. Cartoon shows dorsal views of Ciona mid gastrula (left) and Petromyzon
More informationModulation of central pattern generator output by peripheral sensory cells in Drosophila larvae. BioNB4910 Cornell University.
Modulation of central pattern generator output by peripheral sensory cells in Drosophila larvae BioNB4910 Cornell University Goals 1) Observe the behavioral effects of remotely activating different populations
More informationShavenbaby Couples Patterning to Epidermal Cell Shape Control. Chanut-Delalande H, Fernandes I, Roch F, Payre F, Plaza S (2006) PLoS Biol 4(9): e290
Shavenbaby Couples Patterning to Epidermal Cell Shape Control. Chanut-Delalande H, Fernandes I, Roch F, Payre F, Plaza S (2006) PLoS Biol 4(9): e290 Question (from Introduction): How does svb control the
More informationEngineering local and reversible gene drive for population replacement. Bruce A. Hay.
Engineering local and reversible gene drive for population replacement Bruce A. Hay http://www.its.caltech.edu/~haylab/ To prevent insect-borne disease Engineer insects to resist infection Replace the
More informationEukaryotic Gene Expression
Eukaryotic Gene Expression Lectures 22-23 Several Features Distinguish Eukaryotic Processes From Mechanisms in Bacteria 123 Eukaryotic Gene Expression Several Features Distinguish Eukaryotic Processes
More informationMajor questions of evolutionary genetics. Experimental tools of evolutionary genetics. Theoretical population genetics.
Evolutionary Genetics (for Encyclopedia of Biodiversity) Sergey Gavrilets Departments of Ecology and Evolutionary Biology and Mathematics, University of Tennessee, Knoxville, TN 37996-6 USA Evolutionary
More informationCaenorhabditis elegans
Caenorhabditis elegans Why C. elegans? Sea urchins have told us much about embryogenesis. They are suited well for study in the lab; however, they do not tell us much about the genetics involved in embryogenesis.
More informationIN the Drosophila ventral nerve cord, there are 20
Copyright Ó 2007 by the Genetics Society of America DOI: 10.1534/genetics.107.075085 Regulation of Axon Guidance by Slit and Netrin Signaling in the Drosophila Ventral Nerve Cord Krishna Moorthi Bhat,
More informationDrosophila metamorphosis
Development 129, 1739-1750 (2002) Printed in Great Britain The Company of Biologists Limited 2002 DEV6560 1739 Spatial patterns of ecdysteroid receptor activation during the onset of Drosophila metamorphosis
More informationDevelopment of the Drosophila mushroom bodies: sequential generation of three distinct types of neurons from a neuroblast
Development 126, 4065-4076 (1999) Printed in Great Britain The Company of Biologists Limited 1999 DEV8625 4065 Development of the Drosophila mushroom bodies: sequential generation of three distinct types
More informationA complementation test would be done by crossing the haploid strains and scoring the phenotype in the diploids.
Problem set H answers 1. To study DNA repair mechanisms, geneticists isolated yeast mutants that were sensitive to various types of radiation; for example, mutants that were more sensitive to UV light.
More informationApoptosis in Mammalian Cells
Apoptosis in Mammalian Cells 7.16 2-10-05 Apoptosis is an important factor in many human diseases Cancer malignant cells evade death by suppressing apoptosis (too little apoptosis) Stroke damaged neurons
More informationAxis Specification in Drosophila
Developmental Biology Biology 4361 Axis Specification in Drosophila November 6, 2007 Axis Specification in Drosophila Fertilization Superficial cleavage Gastrulation Drosophila body plan Oocyte formation
More informationTime allowed: 2 hours Answer ALL questions in Section A, ALL PARTS of the question in Section B and ONE question from Section C.
UNIVERSITY OF EAST ANGLIA School of Biological Sciences Main Series UG Examination 2017-2018 GENETICS BIO-5009A Time allowed: 2 hours Answer ALL questions in Section A, ALL PARTS of the question in Section
More informationControl of Gene Expression
Control of Gene Expression Mechanisms of Gene Control Gene Control in Eukaryotes Master Genes Gene Control In Prokaryotes Epigenetics Gene Expression The overall process by which information flows from
More informationAxis determination in flies. Sem 9.3.B.5 Animal Science
Axis determination in flies Sem 9.3.B.5 Animal Science All embryos are in lateral view (anterior to the left). Endoderm, midgut; mesoderm; central nervous system; foregut, hindgut and pole cells in yellow.
More informationFigure S1. Programmed cell death in the AB lineage occurs in temporally distinct
SUPPLEMENTAL FIGURE LEGENDS Figure S1. Programmed cell death in the AB lineage occurs in temporally distinct waves. (A) A representative sub-lineage (ABala) of the C. elegans lineage tree (adapted from
More informationDevelopmental Biology Lecture Outlines
Developmental Biology Lecture Outlines Lecture 01: Introduction Course content Developmental Biology Obsolete hypotheses Current theory Lecture 02: Gametogenesis Spermatozoa Spermatozoon function Spermatozoon
More informationExtranuclear Inheritance
Extranuclear Inheritance Extranuclear Inheritance The past couple of lectures, we ve been exploring exceptions to Mendel s principles of transmission inheritance. Scientists have observed inheritance patterns
More informationBursicon Functions within the Drosophila CNS to Modulate Wing Expansion Behavior, Hormone Secretion, and Cell Death
The Journal of Neuroscience, December 31, 2008 28(53):14379 14391 14379 Cellular/Molecular Bursicon Functions within the Drosophila CNS to Modulate Wing Expansion Behavior, Hormone Secretion, and Cell
More informationMOLECULAR CONTROL OF EMBRYONIC PATTERN FORMATION
MOLECULAR CONTROL OF EMBRYONIC PATTERN FORMATION Drosophila is the best understood of all developmental systems, especially at the genetic level, and although it is an invertebrate it has had an enormous
More informationEukaryotic vs. Prokaryotic genes
BIO 5099: Molecular Biology for Computer Scientists (et al) Lecture 18: Eukaryotic genes http://compbio.uchsc.edu/hunter/bio5099 Larry.Hunter@uchsc.edu Eukaryotic vs. Prokaryotic genes Like in prokaryotes,
More informationMBios 401/501: Lecture 14.2 Cell Differentiation I. Slide #1. Cell Differentiation
MBios 401/501: Lecture 14.2 Cell Differentiation I Slide #1 Cell Differentiation Cell Differentiation I -Basic principles of differentiation (p1305-1320) -C-elegans (p1321-1327) Cell Differentiation II
More information(Write your name on every page. One point will be deducted for every page without your name!)
POPULATION GENETICS AND MICROEVOLUTIONARY THEORY FINAL EXAMINATION (Write your name on every page. One point will be deducted for every page without your name!) 1. Briefly define (5 points each): a) Average
More informationSupporting Online Material for
www.sciencemag.org/cgi/content/full/1178343/dc1 Supporting Online Material for Starvation Protects Germline Stem Cells and Extends Reproductive Longevity in C. elegans This PDF file includes: Giana Angelo
More information10/2/2015. Chapter 4. Determination and Differentiation. Neuroanatomical Diversity
Chapter 4 Determination and Differentiation Neuroanatomical Diversity 1 Neurochemical diversity: another important aspect of neuronal fate Neurotransmitters and their receptors Excitatory Glutamate Acetylcholine
More informationLesson Overview. Gene Regulation and Expression. Lesson Overview Gene Regulation and Expression
13.4 Gene Regulation and Expression THINK ABOUT IT Think of a library filled with how-to books. Would you ever need to use all of those books at the same time? Of course not. Now picture a tiny bacterium
More informationDevelopment of Drosophila
Development of Drosophila Hand-out CBT Chapter 2 Wolpert, 5 th edition March 2018 Introduction 6. Introduction Drosophila melanogaster, the fruit fly, is found in all warm countries. In cooler regions,
More informationNucView TM 488 Caspase-3 Assay Kit for Live Cells
NucView TM 488 Caspase-3 Assay Kit for Live Cells Catalog Number: 30029 (100-500 assays) Contact Information Address: Biotium, Inc. 3423 Investment Blvd. Suite 8 Hayward, CA 94545 USA Telephone: (510)
More informationDrosophila. Caspases function in autophagic programmed cell death in. Research article
Development First posted epress online online 10 December publication 2003 date as 10.1242/dev.00933 10 December 2003 Access the most recent version at http://dev.biologists.org/lookup/doi/10.1242/dev.00933
More informationFull file at CHAPTER 2 Genetics
CHAPTER 2 Genetics MULTIPLE CHOICE 1. Chromosomes are a. small linear bodies. b. contained in cells. c. replicated during cell division. 2. A cross between true-breeding plants bearing yellow seeds produces
More informationThe two Drosophila cytochrome C proteins can function in both respiration and caspase activation
The EMBO Journal (2006) 25, 232 243 & 2006 European Molecular Biology Organization All Rights Reserved 0261-4189/06 www.embojournal.org The two Drosophila cytochrome C proteins can function in both respiration
More informationNeural development its all connected
Neural development its all connected How do you build a complex nervous system? How do you build a complex nervous system? 1. Learn how tissue is instructed to become nervous system. Neural induction 2.
More informationGenetic Lab 3. Drosophila Fly
Genetic Lab 3 Drosophila Fly An Introduction to fruit or vinegar fly Drosophila Melanogaster Is a small (about 3mm long), common fly found near unripe and rotted fruit, so that it called fruit or vinegar
More informationSupplementary Figure 1. Markedly decreased numbers of marginal zone B cells in DOCK8 mutant mice Supplementary Figure 2.
Supplementary Figure 1. Markedly decreased numbers of marginal zone B cells in DOCK8 mutant mice. Percentage of marginal zone B cells in the spleen of wild-type mice (+/+), mice homozygous for cpm or pri
More informationBig Idea 3: Living systems store, retrieve, transmit and respond to information essential to life processes. Tuesday, December 27, 16
Big Idea 3: Living systems store, retrieve, transmit and respond to information essential to life processes. Enduring understanding 3.B: Expression of genetic information involves cellular and molecular
More informationCellular Neuroanatomy I The Prototypical Neuron: Soma. Reading: BCP Chapter 2
Cellular Neuroanatomy I The Prototypical Neuron: Soma Reading: BCP Chapter 2 Functional Unit of the Nervous System The functional unit of the nervous system is the neuron. Neurons are cells specialized
More information16 The Cell Cycle. Chapter Outline The Eukaryotic Cell Cycle Regulators of Cell Cycle Progression The Events of M Phase Meiosis and Fertilization
The Cell Cycle 16 The Cell Cycle Chapter Outline The Eukaryotic Cell Cycle Regulators of Cell Cycle Progression The Events of M Phase Meiosis and Fertilization Introduction Self-reproduction is perhaps
More informationThe CARD-carrying caspase Dronc is essential for most, but not all, developmental cell death in Drosophila
2125 The CARD-carrying caspase Dronc is essential for most, but not all, developmental cell death in Drosophila Dongbin Xu 1, *, Ying Li 1, *, Michael Arcaro 1, Melinda Lackey 1 and Andreas Bergmann 1,
More informationRegulation of Gene Expression
Chapter 18 Regulation of Gene Expression Edited by Shawn Lester PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley
More informationPrinciples of Genetics
Principles of Genetics Snustad, D ISBN-13: 9780470903599 Table of Contents C H A P T E R 1 The Science of Genetics 1 An Invitation 2 Three Great Milestones in Genetics 2 DNA as the Genetic Material 6 Genetics
More informationSuppression of the rbf null mutants by a de2f1 allele that lacks transactivation domain
Development 127, 367-379 (2000) Printed in Great Britain The Company of Biologists Limited 2000 DEV5342 367 Suppression of the rbf null mutants by a de2f1 allele that lacks transactivation domain Wei Du
More informationChronic malnutrition favours smaller critical size for metamorphosis initiation in Drosophila melanogaster
Vijendravarma et al: Experimental evolution of critical size 1 Chronic malnutrition favours smaller critical size for metamorphosis initiation in Drosophila melanogaster Roshan K. Vijendravarma, Sunitha
More informationRegulation of the Drosophila Initiator Caspase Dronc through Ubiquitylation
University of Massachusetts Medical School escholarship@umms GSBS Dissertations and Theses Graduate School of Biomedical Sciences 1-17-2017 Regulation of the Drosophila Initiator Caspase Dronc through
More informationMultiple Choice Review- Eukaryotic Gene Expression
Multiple Choice Review- Eukaryotic Gene Expression 1. Which of the following is the Central Dogma of cell biology? a. DNA Nucleic Acid Protein Amino Acid b. Prokaryote Bacteria - Eukaryote c. Atom Molecule
More informationScience Unit Learning Summary
Learning Summary Inheritance, variation and evolution Content Sexual and asexual reproduction. Meiosis leads to non-identical cells being formed while mitosis leads to identical cells being formed. In
More informationThe Emergence of Modularity in Biological Systems
The Emergence of Modularity in Biological Systems Zhenyu Wang Dec. 2007 Abstract: Modularity is a ubiquitous phenomenon in various biological systems, both in genotype and in phenotype. Biological modules,
More informationS Phase Coupled E2f1 Destruction Ensures Homeostasis in Proliferating Tissues
S Phase Coupled E2f1 Destruction Ensures Homeostasis in Proliferating Tissues Jean M. Davidson 1, Robert J. Duronio 1,2,3 * 1 Department of Biology, The University of North Carolina at Chapel Hill, Chapel
More information