HODGKIN-HUXLEY MODEL: MEMBRANE CURRENT
|
|
- Robert Blankenship
- 5 years ago
- Views:
Transcription
1 DOING PHYSICS WITH MATLAB BIOPHYSICS HODGKIN-HUXLEY MODEL: MEMBRANE CURRENT Ian Cooper School of Physics, University of Sydney MATLAB SCRIPTS (download files) alpha. Function: calculates the rate constants x (equations 18, 19) beta. Function: calculates the rate constants x (equations 18, 19) alpha_beta_plot. -script: plot of rate constants as a function of ebrane voltage (figure 4) N_0. Function: calculations n(0), (0), h(0) (equation 13) N_inf. Function: calculations n(), (), h() (equation 13) tau. Function: calculations of tie constants n,, h (equation 15) tau_nh_inf_plot. -script: plots of n(), (), h() and n,, h (figure 5) bp_neuron_02. -script: plot of rate constants x, x and gate variables gk, gna (figure 7) for a voltage clap bp_neuron_01. -script: plots of ebrane voltage and conductances for an external current stiulus bp_neuron_01a. -script: plots of ebrane voltage and conductances for an external current stiulus of ultiple pulses bp_neuron_01b. -script: plots of ebrane voltage and conductances for an external current stiulus bp_neuron_01bb. -script: plot of firing frequency vs agnitude of current stiulus (figure 16) bp_neuron_01c. -script: different external current stiuli (can include noise) and plot of interval distribution for repetitive firing Doing Physics With Matlab bp_hh_01 1
2 Physical Quantities: Sybols, Units, Typical values t ~ s tie a 5x10-6 Radius of axon b 6x10-9 Mebrane thickness R i Longitudinal resistance of axon r in 6.4x Longitudinal resistance / length axoplas resistance / length V(t,x) V (t,x) ~ - 70 V to + 40 V instantaneous potential difference across ebrane (ebrane potential) V in (t,x) ~ - 70 V to + 40 V potential inside cell Vin = V (ebrane potential) V out 0 potential outside cell: consider as ground potential V R -65 V Resting ebrane potential C F ebrane capacitance c 1.0x10-6 F/c 2 Capacitance / area Q(t,x) C instantaneous charge on capacitor plates I C (t,x) A instantaneous capacitive current I ion (t,x) = A ion current or ebrane current I (t,x) I Na (t,x) A Na + current I K (t,x) A K + current I L (t,x) A leakage current sall, ainly Cl - I in (t,x) A Longitudinal current current along inside of axon J ext (t,x) A.c -2 Instantaneous external stiulus current density J ion (t,x) = A.c -2 ion current or ebrane current density J (t,x) J Na (t,x) A.c -2 Na + current density J K (t,x) A.c -2 K + current density J L (t,x) A.c -2 leakage current density sall, ainly Cl - J ext (t,x) A.c -2 external stiulus current density G Na (t,x) -1 Na + conductance G K (t,x) -1 K + conductance G L (t,x) -1 leakage conductance g Na (t,x) g Na = 120x c -2 Na + conductance / area axiu value g K (t,x) g K = 36x c -2 K + conductance / area axiu value g L (t,x) g L = 0.3x c -2 leakage conductance / area axiu value E Na + 50 V reversal potential for Na + E K - 77 V reversal potential for K + E L V reversal potential for leakage Doing Physics With Matlab bp_hh_01 2
3 k 1.38x10-23 J.K -1 Boltzann s constant e 1.60x10-19 C Charge on an electron z Valency of an ion T K or o C Teperature Doing Physics With Matlab bp_hh_01 3
4 INTRODUCTION The core atheatical fraework for odern biophysically based neural odelling was developed around 1950 by Alan Hodgkin and Andrew Huxley. They carried out a series of elegant electrophysiological experients on the squid giant which has an extraordinarily large diaeter ~ 0.5. Hodgkin and Huxley systeatically deonstrated how the acroscopic ionic currents in the squid giant axon could be understood in ters of changes in Na + and K + conductances in the axon ebrane. Based on a series of voltage-clap experients, they developed a detailed atheatical odel of the voltage-dependent and tie-dependent properties of the Na + and K + conductances. Their odel accurately reproduces the key biophysical properties of the action potential. For this outstanding achieveent, Hodgkin and Huxley were awarded the 1963 Nobel Prize in Physiology and Medicine. In biophysically based neural odelling, the electrical properties of a neuron are represented in ters of an electrical equivalent circuit. Capacitors are used to odel the charge storage capacity of the cell ebrane, resistors are used to odel the various types of ion channels ebedded in ebrane, and batteries are used to represent the electrocheical potentials established by differing intracellular and extracellular ion concentrations. Figure 1 shows the equivalent circuit used by Hodgkin and Huxley in odelling a segent of squid giant axon. The current across the ebrane has two ajor coponents, one associated with the ebrane capacitance and one associated with the flow of ions through resistive ebrane channels. V in inside external stiulus I I C I Na I K I L ext C G Na G K G L ebrane V E Na E K E L V out = 0 outside Fig.1. Electrical equivalent circuit for a short segent of squid giant axon. Capacitor (capacitance C of the cell ebrane); Variable resistors (voltagedependent Na + and K + conductances G Na, G K ); fixed resistor (voltageindependent leakage conductance G L ); Batteries (reversal potentials Na +, K +, leakage - E Na, E K, E L ); Mebrane potential V = V in V out ; External stiulus I ext ; Current direction (arrows: I ext outside inside, I Na, I K and I L inside outside. Conductance G, resistance R G = 1 / R. Doing Physics With Matlab bp_hh_01 4
5 MATHEMATICAL ANALYSIS A atheatical analysis of the equivalent RC circuit for the neuron as shown in figure 1 is outlined by the following equations. (1) V = V in V out ebrane potential difference easured w.r.t. V out = 0 (2) IC dq capacitive current (displaceent current): rate of change of charge Q dt at the ebrane surface (3) Q CV Q C charge stored on surface of ebrane (4) () dv() t IC t C differentiating Q w.r.t. t at a fixed position x 0 dt (5) I INa IK IL ebrane current due to oveent of ions (6) Iext IC INa IK IL IC I Kirchhoff s current law (conservation of charge) Fundaental differential equation (D.E.) relating the change in ebrane potential to the currents across the ebrane for a sall segent of the ebrane: dv (7) C I Iext dt at a fixed position x 0 inside I 1 I2 longitudinal currents capacitive current I C I ebrane current outside I ext dx I c I I in V(t,x) V(t,x+dx) I in (t,x) I in (t,x+dx) Fig.2. Longitudinal currents inside cell, ebrane currents and capacitive current for a segent of an axon. Doing Physics With Matlab bp_hh_01 5
6 We also need to consider the current along the axon as shown in figure 2 to ake equation (7) ore general. (8) I I I I I I I I I I Kirchhoff s current law 1 2 c ext c 1 2 ext dq dv C I1 I2 I Iext currents change the charge on the ebrane dt dt (9) If we consider a sall segent (see figure 2), then I1 I2 I( x) I( x dx) I R V rin R dx V( x) V( x dx) V( x dx) V( x) I( x) I( x dx) r dx r dx in I( x) I( x dx) V( x dx) 2 V( x) V( x dx) r dx in The ebrane current crosses an area A 2 adx, using J I / A, c C / Aand using a finite difference approxiation for the second derivative of a function, we can derive a differential equation relating the ebrane voltage to the currents: in 1 ( ) 2 ( ) ( ) 1 J( x) J( x dx) 2rin dx 2r x 2 V x dx V x V x dx V 2 2 in (10) 2 V( t, x) 1 V( t, x) (, ) ext(, ) 2 t 2rin x c J t x J t x Equation (10) is a very general equation starting fro Kirchhoff s laws for a segent of the axon. The only assuptions are that the currents depend only on tie t and position x along the axon and changes on the outside of the axon can be neglected (V out = 0 for all t and x). Doing Physics With Matlab bp_hh_01 6
7 2 V ( t, x) 1 V ( t, x) (, ) ext(, ) 2 t 2 rin x c J t x J t x rate at which capacitor is gaining/losing charge per unit area ionic current densities through ebrane J = J Na + J K +J L external stiulus rate of build up of charge along inside ebrane surface because of longitudinal currents The ebrane current density depends upon driving voltages and the conductances of the ebrane. But this becoes very coplicated because the conductances depend upon the ebrane voltage V. Solutions to equation (10) are only possible by atching solutions with experiental results to deterine values of paraeters and the variation in conductances with ebrane voltage. We will consider a few special exaples in giving solutions to equation (10) that give predictions in good agreeent with experiental results. REVERSAL POTENTIALS inside [K + ] in = 140 [Na + ] in = 15 Concentration difference potential difference: reversal potential or equilibriu potential ion pup ebrane Equilibriu: Nernst equation or Boltzann factor outside [K + ] out = 5 [Na + ] out = 145 E ion k T [ Cin] loge z e [ Cout ] ion pup reversal potential teperature in kelvin [K] The nuber of ions that ove across the ebrane are sall copared to the ions in the intracellular and extracellular fluids and so the concentrations and hence reversal potential can be taken as constants. E E E Na K L 50.0 V 77.0 V 75.6 V Doing Physics With Matlab bp_hh_01 7
8 MEMBRANE CURRENT J Voltage V, current I, resistance R and conductance G are related by the equations 1 V I G R I GV J g J g V G R A A In applying these relationships to ion channels, the equilibriu (reversal) potential for each ion type also needs to be taken into account. This is the potential at which the net ionic current flowing across the ebrane would be zero for a given ion species. The reversal potentials are represented by the batteries in figure 1. Hence, (11) J g ( V E ) J g ( V E ) J g ( V E ) Na Na Na K K K L L L These relationships are coplicated because J and V are function of t and x, but also g is a function of V which is a function of t and x. We will develop a odel to give a functional relationship for each g. However, the conductance for the leakage is assued to be constant (independent of V, t or x g g ). L L inside + J K > 0 dv /dt <0 ebrane + J NA > 0 dv /dt < 0 J L > 0 dv /dt < 0 V I ext > 0 positive charges transferred fro outside to inside, depolarizing ebrane: V increases outside I ion = I > 0 positive charges transferred fro inside to outside, hyperpolarizing ebrane: V decreases Fig. 3. Sign convention for currents. A positive external current I ext (outside to inside) will tend to depolarize the cell (i.e., ake V ore positive) while a positive ionic current I ion will tend to hyperpolarize the cell (i.e., ake V = V ore negative). In a siple odel, the Na + and K + ions are considered to flow through ion channels where a series of gates deterine the conductance of the ion channel. The acroscopic conductances of the Hodgkin & Huxley odel arise fro the cobined effects of a large nuber of icroscopic ion channels ebedded in the ebrane. Each individual ion channel can be thought of as containing one or ore physical gates that regulate the flow of ions through the channel. The variation in g values is deterined by the set of gate variables n, and h. Doing Physics With Matlab bp_hh_01 8
9 K + gates: position 0n 1 Na + gates: position h 1 n n n n ion channel ebrane ion channel h gates ove to decrease conductance g K n 0 gates ove to increase conductance g K n 1 gate variables: n,, h The value of the conductance depends upon the ebrane voltage V because the values of n, and h depend on tie, their previous value at an earlier tie and the ebrane voltage. The rates of change of the gate variables are dn n n n n d dh h h h h dt dt dt (12) where the the s and s are rate constants g K g n K 4 g Na decreases: 0 g Na increases: 1 g Na decreases: h 0 g Na increases: h 1 3 gna gna h rate of closed gates opening rate of open gates closing x 1 x fraction of gates opening per second x n or or h x x fraction of gates closing per second If the ebrane voltage is claped at soe fixed value V, then values of the gate variables n, and h will reach a steady state value n, and h dx x1 x x x 0 dt where x n or or h and the steady state (equilibriu) value is given by (13) x x x x If at tie t = 0, x(0) = x 0, then a solution of equation (12) is Doing Physics With Matlab bp_hh_01 9
10 t (14) / t/ x x e n 0 e 1 x x where the tie x constant for the evolution of x is 1 (15) x x The K + channel is controlled by 4n activation gates (16) g g n n n K K x 4 dn 1 dt n The Na + channel is controlled by 3 activation gates and 1h inactivation gate 3 d 1 dh 1 dt dt (17) g g h h h K K An activation gate conductance increases with depolarization (V increases) An inactivation gate conductance decreases with depolarization (V increases) Expressions for the rate constants and were forulated by Hodgkin and Huxley in their series of voltage clap experients of giant axon nerve cells. (18) 3 T dv V V r dv (19a) n exp(1-0.1 dv) dv (19b) exp( dv) - 1 B exp(- dv / 80) n B 4 exp(- dv /18) (19c) h 0.07 exp(- dv / 20) B h 1 exp( dv) 1 The rate constants and can be calculated as functions of ebrane voltage V and teperature T using the Matlab functions alpha. and beta.. The variables V (in illivolts, V) and the teperature T (in o C) are passed onto the functions. The functions return the rate constants and (in /illiseconds, s -1 ). The resting potential V r ust be set to a global variable. The default value is V r = -65 V. Doing Physics With Matlab bp_hh_01 10
11 Matlab code for the two functions function [ An A Ah ] = alpha(v,t) % Returns rate constant in units per s (illisecond) % Inputs: V in [V] and teperature in [deg C] global Vr dv = (V - Vr); phi = 3^((T-6.3)/10); An = phi * (eps * dv)./ (eps + exp(1-0.1.* dv) - 1); A = phi * (eps * dv)./ (eps + exp( * dv) - 1); Ah = phi * 0.07.* exp(-dv./ 20); end function [ Bn B Bh ] = beta(v,t) % Returns rate constant in units per s (illisecond) % Inputs: V in [V] and teperature in [deg C] global Vr dv = (V - Vr); phi = 3^((T-6.3)/10); Bn = phi * * exp(-dv./ 80); B = phi * 4.* exp(-dv/18); Bh = phi * 1./ (exp( * dv) + 1); end The -script alpha_beta_plot. can be used to plot the rate constants and as functions of ebrane potential V at a fixed teperature T as sown in figure 4. Fig.4. Plots of the rate constants and as functions of V at T = 6.3 o C. alpha_beta_plot. Doing Physics With Matlab bp_hh_01 11
12 The steady values of (n,, h ), the steady values of (n 0, 0, h 0 ) when V = V r and the tie constants ( n,, h ) are calculated using the Matlab functions N_inf., N_0. and tau.. The result of the calculations are shown in figure 5 which was created using the Matlab - script tau_nh_inf_plot. Fig. 5. n,, h, and n,, h as functions of ebrane potential V. << n or h very quickly. n and are activating gate variables (increase in values as V increases). h is an inactivating gate variable (h decrease as V increases). The blue circle gives the value of n 0, 0 and h 0. T = 6.3 o C tau_nh_inf_plot. Doing Physics With Matlab bp_hh_01 12
13 VOLTAGE-CLAMP SIMULATIONS In any of the experients perfored by Hodgkin and Huxley, they held the ebrane at a fixed voltage by inserting an electrode into the axon of a squid. Fig. 6. Voltage-clap of a squid axon. The Matlab -script bp_neuron_02. can be used to calculate and display the voltageclap, the current densities (J, J L, J K and J Na ), the gate variables (, 3, h and n, n 4 ) and the conductances (g Na, g K ). Saple graphical outputs are shown in figure 7 for voltage claps of +20 V and +80 V. Outline the -script bp_neuron_02. structure Default resting potential V r = -65 V Voltage clap is given as a long pulse Rate constants and are calculated using the functions alpha. and beta. As the tie variable is increented, the gates variables (n,, h) then the conductances (g Na and g K ) then the current densities (J NA, J Na and J M ) are calculated for each tie step. The gate variables are calculated fro equation (12) by using the finite difference ethod to approxiate the first derivative: nt(c+1) = nt(c) + dt * (An(c) *(1-nt(c)) - Bn(c) * nt(c)); t(c+1) = t(c) + dt * (A(c) *(1-t(c)) - B(c) * t(c)); ht(c+1) = ht(c) + dt * (Ah(c) *(1-ht(c)) - Bh(c) * ht(c)); Doing Physics With Matlab bp_hh_01 13
14 Fig. 7. Variation in the gate variables, conductances and current densities for a voltage-clap applied to the axon. The depolarization produced by the clap causes a transient increase in Na + into the cell. The rise in the K + current fro the cell occurs ore slowly and is aintained as long as the ebrane is depolarized. The rate of rise of the Na+ and K+ currents increases with increasing size of the voltage clap and the peak values of Na + and K + currents are significantly increased as the clap voltage is increased, the peak values are over 100 ties the agnitudes in the resting ebrane. bp_neuron_02. Doing Physics With Matlab bp_hh_01 14
15 ACTION POTENTIAL SIMULATION The equations listed below constitute the coplete set of equations to describe the ebrane current in a squid axon and ebrane voltage. (10) 2 V( t, x) 1 V( t, x) (, ) ext(, ) 2 t 2rin x c J t x J t x (11) JNa gna ( V ENa) JK gk ( V EK) JL gl ( V EL) J JNa JK JL 4 dn 1 (16) g g n n n K K dt n 3 d 1 dh 1 dt dt (17) g g h h h K K g L g L (13) n n n n h h h h (18) 3 T dv V V r dv (19a) n exp(1-0.1 dv) dv (19b) exp( dv) - 1 B exp(- dv / 80) n B 4 exp(- dv /18) (19c) h 0.07 exp(- dv / 20) B h 1 exp( dv) 1 We will consider an axially claped axon where the interior potential does not depend upon the location x along its length: V(t,x) = V(t). Since the ebrane voltage V does not depend upon x the second derivative in equation (10) is zero (20) 2 2 V( t, x) V( t) x x Hence equation (10) siplifies to (21) Vt () c J( t) Jext ( t) t Doing Physics With Matlab bp_hh_01 15
16 If there is no external stiulus J ext = 0 and V = V r (resting potential) then J = 0 and V does not change with tie t as dv/dt = 0. It is necessary to introduce a stiulus to create a pulse. Equation (21) can be solved nuerically by using the finite difference ethod to approxiate the derivatives in equations 21, 16 and 17. An outline of the Matlab code to solve equation (21) is shown below. for cc = 1 : nu-1 [ An A Ah ] = alpha(v(cc)*1000, T); [ Bn B Bh ] = beta(v(cc)*1000, T); An = sf * An; A = sf * A; Ah = sf * Ah; Bn = sf * Bn; B = sf * B; Bh = sf * Bh; n(cc+1) = n(cc) + dt * (An *(1-n(cc)) - Bn * n(cc)); (cc+1) = (cc) + dt * (A *(1-(cc)) - B * (cc)); h(cc+1) = h(cc) + dt * (Ah *(1-h(cc)) - Bh * h(cc)); gk(cc+1) = n(cc+1)^4 * gkax; gna(cc+1) = (cc+1)^3 * h(cc+1) * gnaax; JK(cc+1) = gk(cc+1) * (V(cc) - VK); JNa(cc+1) = gna(cc+1) * (V(cc) - VNa); JL(cc+1) = gl(cc+1) * (V(cc) - VR e-3); J(cc+1) = JNa(cc+1) + JK(cc+1) + JL(cc+1); V(cc+1) = V(cc) + (dt/c)*(-jk(cc+1) - JNa(cc+1) - JL(cc+1) + Jext(cc+1)); end Doing Physics With Matlab bp_hh_01 16
17 Single current pulse The results for current pulse stiuli using the -script bp_neuron_01. are shown in the following figures. Fig. 8. The current densities for the stiulated axon at 18.5 o C. Only a very sall current pulse is required to draatically change the conductances of the ebrane to produce large K + and Na + currents. The potassiu current is positive as the K + ions ove fro inside to the outside of the cell whereas the sodiu current is negative as Na + ions ove into the cell across the ebrane. The Na + and K + currents are nearly balanced throughout ost of the pulse which lasts about 2 s. The J Na curve has an extra wiggle around t = 1.3 s caused by the rapidly changing voltage while the conductance g Na varies soothly. bp_neuron_01. Fig. 9. The conductance for potassiu and sodiu for the stiulated axon at 18.5 o C. Both the conductances vary soothly. The rise in the sodiu conductance occurs ore rapidly than for the potassiu. bp_neuron_01. Doing Physics With Matlab bp_hh_01 17
18 stiulus refractory period resting state V r = -65 V Fig. 10. Action potential produced by an external current pulse (J ext = 1.0x10-4 A.c -2 and duration 0.10 s) at a teperature of 18.5 o C. If the pulse height is halved and the pulse width is doubled ( J ext = 0.50x10-4 A.c -2 and duration 0.20 s: aount of charge transferred is constant q = I t = constant), the variation of ebrane potential with tie is alost unchanged. bp_neuron_01. J ext = 2 A.c -2 J ext = 1 A.c -2 J ext = 0.6 A.c -2 Fig. 11. Mebrane voltage responses to three different external stiuli at 18.5 o C and duration 0.10 s. (a) J ext = 0.6 A.c -2, no action potential pulse is produced, only a sall rise in the ebrane voltage and then a slow decay back to the resting potential. There is a threshold, when the the external stiulus exceeds soe critical value an action potential is produced. (b) J ext = 1.0 A.c -2, an action potential pulse is produced. (c) J ext = 2.0 A.c -2, an action potential pulse is which rises ore rapidly and to a higher peak value than the 1.0 A.c -2 stiulus. bp_neuron_01. Doing Physics With Matlab bp_hh_01 18
19 Fig. 12. Plots for the coputation of an action potential generated by a A.c -2 external stiulus in a voltage clap squid axon at 6.3 o C. The tie scale is different for the stiulus at 18.5 o C where the pulse is uch of a shorter duration. bp_neuron_01. Fig. 13. Plots for the coputation for a negative current pulse at 18.5 o C. The conductances of the ebrane decreases and the ebrane potential becoes ore polarized before slowly returning to its resting value. bp_neuron_01. Doing Physics With Matlab bp_hh_01 19
20 Multiple current pulses external stiuli 2 nd stiulus at 4.0 s action potential sae as first action potential 1 st stiulus at 0.5 s 2 nd stiulus at 3.1 s no action potential 2 nd stiulus at 3.2 s action potential but reduced peak value Fig. 14. Double stiulus. A second action potential is only produced when sufficient tie has passed for the ebrane voltage to return to nearly the resting potential. The refractory tie is about 2.6 s. If pulses occur in a tie less than 2.6 s, no action potential is generated. Doing Physics With Matlab bp_hh_01 20
21 Fig. 15. A series of current pulses can be injected into the neuron. If the repetition rate is too high for the pulses, then, not every pulse will result is an action potential being created. bp_neuron1a. Doing Physics With Matlab bp_hh_01 21
22 Step input current Doing Physics With Matlab bp_hh_01 22
23 Fig. 16. The external stiuli are step inputs for the currents densites (constant current injection). The stiuli are switched on at tie t = 5.0 s. If the size of the step is less than A.c -2 then an action potential is not produced. As the size of the step is increased, the frequency of the repetitive firing increases but the the degree of depolarization decreases. bp_neutron_01b.. Fig.17. The frequency f of the repetitive firing was deterined for each value of I 0. This was done by using the Matlab coand ginput to easure the period of the repetitive firing of the neuron in the figure window for the variation in ebrane voltage as a function of tie. bp_neuron_01bb. Doing Physics With Matlab bp_hh_01 23
24 External Stiuli with noise Noise was added to the external stiulus using the rando nubers to generate white noise. The Matlab code for the one type of noise that was used to produce the plots shown in figure 18 is: nu1 = 81; nu = 80000; Jext_ax = 0.2e-4; % ax current density for ext stiulus (A.c^-2) Jext(nu1:nu) = Jext_ax; % external stiulus current rng('shuffle'); Jext = Jext./2 + (Jext_ax./2).* (2.*rand(nu,1)-1); Fig. 18. A noisy external stiulus used to excited the neuron showing a portion of the external signal for a short tie interval. bp_neuron_01c. Doing Physics With Matlab bp_hh_01 24
25 Fig. 19. External stiuli for a rando input current density variation between 0 and 0.02 A.c -2. The input siulates noise. Spike trains are produced spasodically. The spike trains have a slightly larger tie interval between adjacent spikes than for a constant current density signal of 0.02 A.c -2 as shown in the lower plot. Doing Physics With Matlab bp_hh_01 25
26 Interval Spike Distribution Fig. 20. A step input for the current density (I 0 = 0.02 A.c -2 ) produces a spike train with action potentials produced at regular intervals (period T = 3.93 s and frequency f = 254 Hz. bp_neuron_01c. Doing Physics With Matlab bp_hh_01 26
27 Fig. 21. The ebrane voltage variation due to the noisy external stiulus shown in figure 19. bp_neuron_01c. Fig. 22. The interspike interval distribution for the spike train shown in figure 20. The spike frequency is about 191 Hz which is lower than that for the constant input shown in figure 18. bp_neuron_01c. Doing Physics With Matlab bp_hh_01 27
28 Strong stiulus and noise A neuron receives signals fro thousands of other neurons creating a noisy input resulting in sall rando fluctuations of the ebrane potential around its resting value. A strong external stiulus pulse added to the noise creates a depolarization of the ebrane producing a spike or a short spike train. Fig. 23. A sall aplitude noisy external stiulus and a strong short pulse added to the noise. The short pulse results in a firing of the neuron to produce a short spike train. bp_neuron_01c. Doing Physics With Matlab bp_hh_01 28
29 Sinusoidal external stiulus The excitation of nerve cells by sinusoidal alternating current wavefors is very dependent upon the frequency of the stiulus because of the necessity to transfer a specific aount of charge to produce the excitation. Fig. 24. A sinusoidal external current stiulus (period 5.0 s and frequency 200 Hz) produces a spike train with a frequency that atches the external stiulus. There is enough tie for the ebrane of the nerve cell to depolarize as sufficient electric charge can be applied to the ebrane within the positive half cycle of the stiulus (charge transferred equals area under current vs tie curve t2 Q i dt ). bp_neuron_01c. t1 Doing Physics With Matlab bp_hh_01 29
30 Fig. 25. A sinusoidal external current stiulus (period 2.5 s and frequency 400 Hz) does not produce a spike train. The ebrane potential oscillates with sall aplitude around the resting ebrane potential (V rest = - 65 V) with a frequency that is close to the frequency of the external stiulus. With this higher frequency of external stiulus there is not sufficient electric charge to depolarize the ebrane before the current polarity reverses which then acts to repolarize the ebrane. Fro a circuit analysis point of view, there is not sufficient tie for the capacitor to charge and hence only a sall voltage drop across it can develop. At higher frequency, the ipedance of the capacitor is low thus the voltage across it is also low. bp_neuron_01c. ap/p/iages/circuits_01.pptx Doing Physics With Matlab bp_hh_01 30
Electrical Engineering 3BB3: Cellular Bioelectricity (2013) Solutions to Midterm Quiz #1
Electrical Engineering 3BB3: Cellular Bioelectricity (2013) Solutions to Midter Quiz #1 1. In a typical excitable cell, the ion species with the ost positive Nernst equilibriu potential is: a. potassiu,
More informationElectrical Engineering 3BB3: Cellular Bioelectricity (2008) Solutions to Midterm Quiz #1
Electrical Engineering 3BB3: Cellular Bioelectricity (2008) Solutions to Midter Quiz #1 1. In typical excitable cells there will be a net influx of K + through potassiu ion channels if: a. V Vrest >, b.
More informationFigure 1: Equivalent electric (RC) circuit of a neurons membrane
Exercise: Leaky integrate and fire odel of neural spike generation This exercise investigates a siplified odel of how neurons spike in response to current inputs, one of the ost fundaental properties of
More informationThe Wilson Model of Cortical Neurons Richard B. Wells
The Wilson Model of Cortical Neurons Richard B. Wells I. Refineents on the odgkin-uxley Model The years since odgkin s and uxley s pioneering work have produced a nuber of derivative odgkin-uxley-like
More informationAlteration of resting membrane potential
Observation electric current easuring electrodes Alteration of resting ebrane potential ebrán extracellular spece intracellular space 1. passive electric properties of the ebrane Inward current Depolarization
More informationHow and why neurons fire
How and why neurons fire 1 Neurophysiological Background The Neuron Contents: Structure Electrical Mebrane Properties Ion Channels Actionpotential Signal Propagation Synaptic Transission 2 Structure of
More informationComputational Neuroscience Summer School Neural Spike Train Analysis. An introduction to biophysical models (Part 2)
Computational Neuroscience Summer School Neural Spike Train Analysis Instructor: Mark Kramer Boston University An introduction to biophysical models (Part 2 SAMSI Short Course 2015 1 Goal: Model this,
More informationElectrophysiology of the neuron
School of Mathematical Sciences G4TNS Theoretical Neuroscience Electrophysiology of the neuron Electrophysiology is the study of ionic currents and electrical activity in cells and tissues. The work of
More informationΝευροφυσιολογία και Αισθήσεις
Biomedical Imaging & Applied Optics University of Cyprus Νευροφυσιολογία και Αισθήσεις Διάλεξη 5 Μοντέλο Hodgkin-Huxley (Hodgkin-Huxley Model) Response to Current Injection 2 Hodgin & Huxley Sir Alan Lloyd
More informationHORIZONTAL MOTION WITH RESISTANCE
DOING PHYSICS WITH MATLAB MECHANICS HORIZONTAL MOTION WITH RESISTANCE Ian Cooper School of Physics, Uniersity of Sydney ian.cooper@sydney.edu.au DOWNLOAD DIRECTORY FOR MATLAB SCRIPTS ec_fr_b. This script
More informationGeneral Properties of Radiation Detectors Supplements
Phys. 649: Nuclear Techniques Physics Departent Yarouk University Chapter 4: General Properties of Radiation Detectors Suppleents Dr. Nidal M. Ershaidat Overview Phys. 649: Nuclear Techniques Physics Departent
More informationTopics in Neurophysics
Topics in Neurophysics Alex Loebel, Martin Stemmler and Anderas Herz Exercise 2 Solution (1) The Hodgkin Huxley Model The goal of this exercise is to simulate the action potential according to the model
More informationVoltage-clamp and Hodgkin-Huxley models
Voltage-clamp and Hodgkin-Huxley models Read: Hille, Chapters 2-5 (best Koch, Chapters 6, 8, 9 See also Hodgkin and Huxley, J. Physiol. 117:500-544 (1952. (the source Clay, J. Neurophysiol. 80:903-913
More informationSignal processing in nervous system - Hodgkin-Huxley model
Signal processing in nervous system - Hodgkin-Huxley model Ulrike Haase 19.06.2007 Seminar "Gute Ideen in der theoretischen Biologie / Systembiologie" Signal processing in nervous system Nerve cell and
More informationVoltage-clamp and Hodgkin-Huxley models
Voltage-clamp and Hodgkin-Huxley models Read: Hille, Chapters 2-5 (best) Koch, Chapters 6, 8, 9 See also Clay, J. Neurophysiol. 80:903-913 (1998) (for a recent version of the HH squid axon model) Rothman
More informationMathematical Foundations of Neuroscience - Lecture 3. Electrophysiology of neurons - continued
Mathematical Foundations of Neuroscience - Lecture 3. Electrophysiology of neurons - continued Filip Piękniewski Faculty of Mathematics and Computer Science, Nicolaus Copernicus University, Toruń, Poland
More informationState Estimation Problem for the Action Potential Modeling in Purkinje Fibers
APCOM & ISCM -4 th Deceber, 203, Singapore State Estiation Proble for the Action Potential Modeling in Purinje Fibers *D. C. Estuano¹, H. R. B.Orlande and M. J.Colaço Federal University of Rio de Janeiro
More informationMeasuring Temperature with a Silicon Diode
Measuring Teperature with a Silicon Diode Due to the high sensitivity, nearly linear response, and easy availability, we will use a 1N4148 diode for the teperature transducer in our easureents 10 Analysis
More informationBIOELECTRIC PHENOMENA
Chapter 11 BIOELECTRIC PHENOMENA 11.3 NEURONS 11.3.1 Membrane Potentials Resting Potential by separation of charge due to the selective permeability of the membrane to ions From C v= Q, where v=60mv and
More informationLecture #8-3 Oscillations, Simple Harmonic Motion
Lecture #8-3 Oscillations Siple Haronic Motion So far we have considered two basic types of otion: translation and rotation. But these are not the only two types of otion we can observe in every day life.
More informationPH 222-2C Fall Electromagnetic Oscillations and Alternating Current. Lectures 18-19
H - Fall 0 Electroagnetic Oscillations and Alternating urrent ectures 8-9 hapter 3 (Halliday/esnick/Walker, Fundaentals of hysics 8 th edition) hapter 3 Electroagnetic Oscillations and Alternating urrent
More informationMath 345 Intro to Math Biology Lecture 20: Mathematical model of Neuron conduction
Math 345 Intro to Math Biology Lecture 20: Mathematical model of Neuron conduction Junping Shi College of William and Mary November 8, 2018 Neuron Neurons Neurons are cells in the brain and other subsystems
More informationChannels can be activated by ligand-binding (chemical), voltage change, or mechanical changes such as stretch.
1. Describe the basic structure of an ion channel. Name 3 ways a channel can be "activated," and describe what occurs upon activation. What are some ways a channel can decide what is allowed to pass through?
More informationMATH 3104: THE HODGKIN-HUXLEY EQUATIONS
MATH 3104: THE HODGKIN-HUXLEY EQUATIONS Parallel conductance model A/Prof Geoffrey Goodhill, Semester 1, 2009 So far we have modelled neuronal membranes by just one resistance (conductance) variable. We
More information9 Generation of Action Potential Hodgkin-Huxley Model
9 Generation of Action Potential Hodgkin-Huxley Model (based on chapter 12, W.W. Lytton, Hodgkin-Huxley Model) 9.1 Passive and active membrane models In the previous lecture we have considered a passive
More informationDETECTION OF NONLINEARITY IN VIBRATIONAL SYSTEMS USING THE SECOND TIME DERIVATIVE OF ABSOLUTE ACCELERATION
DETECTION OF NONLINEARITY IN VIBRATIONAL SYSTEMS USING THE SECOND TIME DERIVATIVE OF ABSOLUTE ACCELERATION Masaki WAKUI 1 and Jun IYAMA and Tsuyoshi KOYAMA 3 ABSTRACT This paper shows a criteria to detect
More informationIntroduction and the Hodgkin-Huxley Model
1 Introduction and the Hodgkin-Huxley Model Richard Bertram Department of Mathematics and Programs in Neuroscience and Molecular Biophysics Florida State University Tallahassee, Florida 32306 Reference:
More informationPOD-DEIM MODEL ORDER REDUCTION FOR THE MONODOMAIN REACTION-DIFFUSION EQUATION IN NEURO-MUSCULAR SYSTEM
6th European Conference on Coputational Mechanics (ECCM 6) 7th European Conference on Coputational Fluid Dynaics (ECFD 7) 1115 June 2018, Glasgow, UK POD-DEIM MODEL ORDER REDUCTION FOR THE MONODOMAIN REACTION-DIFFUSION
More informationElectronics 101 Solving a differential equation Incorporating space. Numerical Methods. Accuracy, stability, speed. Robert A.
Numerical Methods Accuracy, stability, speed Robert A. McDougal Yale School of Medicine 21 June 2016 Hodgkin and Huxley: squid giant axon experiments Top: Alan Lloyd Hodgkin; Bottom: Andrew Fielding Huxley.
More informationChapter 10: Sinusoidal Steady-State Analysis
Chapter 0: Sinusoidal Steady-State Analysis Sinusoidal Sources If a circuit is driven by a sinusoidal source, after 5 tie constants, the circuit reaches a steady-state (reeber the RC lab with t = τ). Consequently,
More informationReading from Young & Freedman: For this topic, read the introduction to chapter 25 and sections 25.1 to 25.3 & 25.6.
PHY10 Electricity Topic 6 (Lectures 9 & 10) Electric Current and Resistance n this topic, we will cover: 1) Current in a conductor ) Resistivity 3) Resistance 4) Oh s Law 5) The Drude Model of conduction
More informationEE5900 Spring Lecture 4 IC interconnect modeling methods Zhuo Feng
EE59 Spring Parallel LSI AD Algoriths Lecture I interconnect odeling ethods Zhuo Feng. Z. Feng MTU EE59 So far we ve considered only tie doain analyses We ll soon see that it is soeties preferable to odel
More informationIonic basis of the resting membrane potential. Foundations in Neuroscience I, Oct
Ionic basis of the resting membrane potential Foundations in Neuroscience I, Oct 3 2017 The next 4 lectures... - The resting membrane potential (today) - The action potential - The neural mechanisms behind
More informationSimulating Hodgkin-Huxley-like Excitation using Comsol Multiphysics
Presented at the COMSOL Conference 2008 Hannover Simulating Hodgkin-Huxley-like Excitation using Comsol Multiphysics Martinek 1,2, Stickler 2, Reichel 1 and Rattay 2 1 Department of Biomedical Engineering
More informationLecture Notes 8C120 Inleiding Meten en Modelleren. Cellular electrophysiology: modeling and simulation. Nico Kuijpers
Lecture Notes 8C2 Inleiding Meten en Modelleren Cellular electrophysiology: modeling and simulation Nico Kuijpers nico.kuijpers@bf.unimaas.nl February 9, 2 2 8C2 Inleiding Meten en Modelleren Extracellular
More informationPHY 171. Lecture 14. (February 16, 2012)
PHY 171 Lecture 14 (February 16, 212) In the last lecture, we looked at a quantitative connection between acroscopic and icroscopic quantities by deriving an expression for pressure based on the assuptions
More informationPNS Chapter 7. Membrane Potential / Neural Signal Processing Spring 2017 Prof. Byron Yu
PNS Chapter 7 Membrane Potential 18-698 / 42-632 Neural Signal Processing Spring 2017 Prof. Byron Yu Roadmap Introduction to neuroscience Chapter 1 The brain and behavior Chapter 2 Nerve cells and behavior
More informationNeural Modeling and Computational Neuroscience. Claudio Gallicchio
Neural Modeling and Computational Neuroscience Claudio Gallicchio 1 Neuroscience modeling 2 Introduction to basic aspects of brain computation Introduction to neurophysiology Neural modeling: Elements
More information6.3.4 Action potential
I ion C m C m dφ dt Figure 6.8: Electrical circuit model of the cell membrane. Normally, cells are net negative inside the cell which results in a non-zero resting membrane potential. The membrane potential
More informationStatistical Logic Cell Delay Analysis Using a Current-based Model
Statistical Logic Cell Delay Analysis Using a Current-based Model Hanif Fatei Shahin Nazarian Massoud Pedra Dept. of EE-Systes, University of Southern California, Los Angeles, CA 90089 {fatei, shahin,
More informationSpine Fin Efficiency A Three Sided Pyramidal Fin of Equilateral Triangular Cross-Sectional Area
Proceedings of the 006 WSEAS/IASME International Conference on Heat and Mass Transfer, Miai, Florida, USA, January 18-0, 006 (pp13-18) Spine Fin Efficiency A Three Sided Pyraidal Fin of Equilateral Triangular
More information1 Brownian motion and the Langevin equation
Figure 1: The robust appearance of Robert Brown (1773 1858) 1 Brownian otion and the Langevin equation In 1827, while exaining pollen grains and the spores of osses suspended in water under a icroscope,
More informationBME 5742 Biosystems Modeling and Control
BME 5742 Biosystems Modeling and Control Hodgkin-Huxley Model for Nerve Cell Action Potential Part 1 Dr. Zvi Roth (FAU) 1 References Hoppensteadt-Peskin Ch. 3 for all the mathematics. Cooper s The Cell
More informationQ5 We know that a mass at the end of a spring when displaced will perform simple m harmonic oscillations with a period given by T = 2!
Chapter 4.1 Q1 n oscillation is any otion in which the displaceent of a particle fro a fixed point keeps changing direction and there is a periodicity in the otion i.e. the otion repeats in soe way. In
More informationAnalysis of Impulsive Natural Phenomena through Finite Difference Methods A MATLAB Computational Project-Based Learning
Analysis of Ipulsive Natural Phenoena through Finite Difference Methods A MATLAB Coputational Project-Based Learning Nicholas Kuia, Christopher Chariah, Mechatronics Engineering, Vaughn College of Aeronautics
More informationCurrent, Resistance Electric current and current density
General Physics Current, Resistance We will now look at the situation where charges are in otion - electrodynaics. The ajor difference between the static and dynaic cases is that E = 0 inside conductors
More informationPH 221-2A Fall Waves - I. Lectures Chapter 16 (Halliday/Resnick/Walker, Fundamentals of Physics 9 th edition)
PH 1-A Fall 014 Waves - I Lectures 4-5 Chapter 16 (Halliday/Resnick/Walker, Fundaentals of Physics 9 th edition) 1 Chapter 16 Waves I In this chapter we will start the discussion on wave phenoena. We will
More informationPeriodic Motion is everywhere
Lecture 19 Goals: Chapter 14 Interrelate the physics and atheatics of oscillations. Draw and interpret oscillatory graphs. Learn the concepts of phase and phase constant. Understand and use energy conservation
More informationStructure and Measurement of the brain lecture notes
Structure and Measurement of the brain lecture notes Marty Sereno 2009/2010!"#$%&'(&#)*%$#&+,'-&.)"/*"&.*)*-'(0&1223 Neurons and Models Lecture 1 Topics Membrane (Nernst) Potential Action potential/voltage-gated
More informationSome Perspective. Forces and Newton s Laws
Soe Perspective The language of Kineatics provides us with an efficient ethod for describing the otion of aterial objects, and we ll continue to ake refineents to it as we introduce additional types of
More informationFaraday's Law Warm Up
Faraday's Law-1 Faraday's Law War Up 1. Field lines of a peranent agnet For each peranent agnet in the diagra below draw several agnetic field lines (or a agnetic vector field if you prefer) corresponding
More informationChapter 1: Basics of Vibrations for Simple Mechanical Systems
Chapter 1: Basics of Vibrations for Siple Mechanical Systes Introduction: The fundaentals of Sound and Vibrations are part of the broader field of echanics, with strong connections to classical echanics,
More informationPhysics 2107 Oscillations using Springs Experiment 2
PY07 Oscillations using Springs Experient Physics 07 Oscillations using Springs Experient Prelab Read the following bacground/setup and ensure you are failiar with the concepts and theory required for
More informationSupporting Online Material
Supporting Online Material (A) Description of the suppleentary ovies Movie : Two-directional alignent of cells using 4-point electrodes. 0.08 % w/v yeast (S. cerevisiae) cells were assebled into D arrays
More informationSupplementary Information for Design of Bending Multi-Layer Electroactive Polymer Actuators
Suppleentary Inforation for Design of Bending Multi-Layer Electroactive Polyer Actuators Bavani Balakrisnan, Alek Nacev, and Elisabeth Sela University of Maryland, College Park, Maryland 074 1 Analytical
More informationPH 221-1D Spring Oscillations. Lectures Chapter 15 (Halliday/Resnick/Walker, Fundamentals of Physics 9 th edition)
PH 1-1D Spring 013 Oscillations Lectures 35-37 Chapter 15 (Halliday/Resnick/Walker, Fundaentals of Physics 9 th edition) 1 Chapter 15 Oscillations In this chapter we will cover the following topics: Displaceent,
More informationma x = -bv x + F rod.
Notes on Dynaical Systes Dynaics is the study of change. The priary ingredients of a dynaical syste are its state and its rule of change (also soeties called the dynaic). Dynaical systes can be continuous
More informationANALYSIS ON RESPONSE OF DYNAMIC SYSTEMS TO PULSE SEQUENCES EXCITATION
The 4 th World Conference on Earthquake Engineering October -7, 8, Beijing, China ANALYSIS ON RESPONSE OF DYNAMIC SYSTEMS TO PULSE SEQUENCES EXCITATION S. Li C.H. Zhai L.L. Xie Ph. D. Student, School of
More informationBiomedical Instrumentation
ELEC ENG 4BD4: Biomedical Instrumentation Lecture 5 Bioelectricity 1. INTRODUCTION TO BIOELECTRICITY AND EXCITABLE CELLS Historical perspective: Bioelectricity first discovered by Luigi Galvani in 1780s
More informationThe Biological Neuron
Biological Signal Processing Richard B. Wells Chapter 4 The Biological Neuron. The Diversity of Voltage-Gated Channels Although the iportance of the original Hodgkin-Huxley odel can hardly be overstated,
More informationExcerpt from the Proceedings of the COMSOL Conference 2010 Paris
Excerpt fro the Proceedings of the COMSOL Conference 21 Paris Modeling of Retinal Electrical Stiulation Using a Micro Electrode Array Coupled with the Gouy-Chapan Electrical Double Layer Model to Investigate
More informationBo Deng University of Nebraska-Lincoln UNL Math Biology Seminar
Mathematical Model of Neuron Bo Deng University of Nebraska-Lincoln UNL Math Biology Seminar 09-10-2015 Review -- One Basic Circuit By Kirchhoff's Current Law 0 = I C + I R + I L I ext By Kirchhoff s Voltage
More informationCOGNITIVE SCIENCE 107A
COGNITIVE SCIENCE 107A Electrophysiology: Electrotonic Properties 2 Jaime A. Pineda, Ph.D. The Model Neuron Lab Your PC/CSB115 http://cogsci.ucsd.edu/~pineda/cogs107a/index.html Labs - Electrophysiology
More informationChapter 10 Objectives
Chapter 10 Engr8 Circuit Analysis Dr Curtis Nelson Chapter 10 Objectives Understand the following AC power concepts: Instantaneous power; Average power; Root Mean Squared (RMS) value; Reactive power; Coplex
More informationPresented by Sarah Hedayat. Supervised by Pr.Cappy and Dr.Hoel
1 Presented by Sarah Hedayat Supervised by Pr.Cappy and Dr.Hoel Outline 2 Project objectives Key elements Membrane models As simple as possible Phase plane analysis Review of important Concepts Conclusion
More informationPHYS 102 Previous Exam Problems
PHYS 102 Previous Exa Probles CHAPTER 16 Waves Transverse waves on a string Power Interference of waves Standing waves Resonance on a string 1. The displaceent of a string carrying a traveling sinusoidal
More informationBEF BEF Chapter 2. Outline BASIC PRINCIPLES 09/10/2013. Introduction. Phasor Representation. Complex Power Triangle.
BEF 5503 BEF 5503 Chapter BASC PRNCPLES Outline 1 3 4 5 6 7 8 9 ntroduction Phasor Representation Coplex Power Triangle Power Factor Coplex Power in AC Single Phase Circuits Coplex Power in Balanced Three-Phase
More informationLecture 11 : Simple Neuron Models. Dr Eileen Nugent
Lecture 11 : Simple Neuron Models Dr Eileen Nugent Reading List Nelson, Biological Physics, Chapter 12 Phillips, PBoC, Chapter 17 Gerstner, Neuronal Dynamics: from single neurons to networks and models
More informationThe Thermal Dependence and Urea Concentration Dependence of Rnase A Denaturant Transition
The Theral Dependence and Urea Concentration Dependence of Rnase A Denaturant Transition Bin LI Departent of Physics & Astronoy, University of Pittsburgh, Pittsburgh, PA 15260, U.S.A Feb.20 th, 2001 Abstract:
More informationIn this chapter we will start the discussion on wave phenomena. We will study the following topics:
Chapter 16 Waves I In this chapter we will start the discussion on wave phenoena. We will study the following topics: Types of waves Aplitude, phase, frequency, period, propagation speed of a wave Mechanical
More informationA Simplified Analytical Approach for Efficiency Evaluation of the Weaving Machines with Automatic Filling Repair
Proceedings of the 6th SEAS International Conference on Siulation, Modelling and Optiization, Lisbon, Portugal, Septeber -4, 006 0 A Siplified Analytical Approach for Efficiency Evaluation of the eaving
More informationUSEFUL HINTS FOR SOLVING PHYSICS OLYMPIAD PROBLEMS. By: Ian Blokland, Augustana Campus, University of Alberta
1 USEFUL HINTS FOR SOLVING PHYSICS OLYMPIAD PROBLEMS By: Ian Bloland, Augustana Capus, University of Alberta For: Physics Olypiad Weeend, April 6, 008, UofA Introduction: Physicists often attept to solve
More informationLecture 10 : Neuronal Dynamics. Eileen Nugent
Lecture 10 : Neuronal Dynamics Eileen Nugent Origin of the Cells Resting Membrane Potential: Nernst Equation, Donnan Equilbrium Action Potentials in the Nervous System Equivalent Electrical Circuits and
More informationAll-or-None Principle and Weakness of Hodgkin-Huxley Mathematical Model
All-or-None Principle and Weakness of Hodgkin-Huxley Mathematical Model S. A. Sadegh Zadeh, C. Kambhampati International Science Index, Mathematical and Computational Sciences waset.org/publication/10008281
More informationMSEC MODELING OF DEGRADATION PROCESSES TO OBTAIN AN OPTIMAL SOLUTION FOR MAINTENANCE AND PERFORMANCE
Proceeding of the ASME 9 International Manufacturing Science and Engineering Conference MSEC9 October 4-7, 9, West Lafayette, Indiana, USA MSEC9-8466 MODELING OF DEGRADATION PROCESSES TO OBTAIN AN OPTIMAL
More informationTorsion Experiment. Encoder #3 ( 3 ) Third encoder/disk for Model 205a only. Figure 1: ECP Torsion Experiment
Torsion Experient Introduction For the Torsion lab, there are two required experients to perfor and one extra credit assignent at the end. In experient 1, the syste paraeters need to be identified so that
More informationIntroduction to Neural Networks U. Minn. Psy 5038 Spring, 1999 Daniel Kersten. Lecture 2a. The Neuron - overview of structure. From Anderson (1995)
Introduction to Neural Networks U. Minn. Psy 5038 Spring, 1999 Daniel Kersten Lecture 2a The Neuron - overview of structure From Anderson (1995) 2 Lect_2a_Mathematica.nb Basic Structure Information flow:
More informationAnnouncement. Grader s name: Qian Qi. Office number: Phys Office hours: Thursday 4:00-5:00pm in Room 134
Lecture 3 1 Announceent Grader s nae: Qian Qi Office nuber: Phys. 134 -ail: qiang@purdue.edu Office hours: Thursday 4:00-5:00p in Roo 134 2 Millikan s oil Drop xperient Consider an air gap capacitor which
More informationResting membrane potential,
Resting membrane potential Inside of each cell is negative as compared with outer surface: negative resting membrane potential (between -30 and -90 mv) Examination with microelectrode (Filled with KCl
More informationOcean 420 Physical Processes in the Ocean Project 1: Hydrostatic Balance, Advection and Diffusion Answers
Ocean 40 Physical Processes in the Ocean Project 1: Hydrostatic Balance, Advection and Diffusion Answers 1. Hydrostatic Balance a) Set all of the levels on one of the coluns to the lowest possible density.
More informationThis is a repository copy of Analytical optimisation of electromagnetic design of a linear (tubular) switched reluctance motor.
This is a repository copy of Analytical optiisation of electroagnetic design of a linear (tubular) switched reluctance otor. White Rose Research Online URL for this paper: http://eprints.whiterose.ac.uk/907/
More informationChapter 10: Sinusoidal Steady-State Analysis
Chapter 0: Sinusoidal Steady-State Analysis Sinusoidal Sources If a circuit is driven by a sinusoidal source, after 5 tie constants, the circuit reaches a steady-state (reeber the RC lab with t τ). Consequently,
More informationUNIVERSITY OF SASKATCHEWAN Department of Physics and Engineering Physics
UNIVERSITY OF SASKATCHEWAN Departent of Physics and Engineering Physics 017 Saskatchewan High School Physics Scholarship Copetition Wednesday May 10, 017 Tie allowed: 90 inutes This copetition is based
More informationOn Parameter Estimation for Neuron Models
On Parameter Estimation for Neuron Models Abhijit Biswas Department of Mathematics Temple University November 30th, 2017 Abhijit Biswas (Temple University) On Parameter Estimation for Neuron Models November
More informationCHAPTER 15: Vibratory Motion
CHAPTER 15: Vibratory Motion courtesy of Richard White courtesy of Richard White 2.) 1.) Two glaring observations can be ade fro the graphic on the previous slide: 1.) The PROJECTION of a point on a circle
More informationNow multiply the left-hand-side by ω and the right-hand side by dδ/dt (recall ω= dδ/dt) to get:
Equal Area Criterion.0 Developent of equal area criterion As in previous notes, all powers are in per-unit. I want to show you the equal area criterion a little differently than the book does it. Let s
More informationSupervised assessment: Modelling and problem-solving task
Matheatics C 2008 Saple assessent instruent and indicative student response Supervised assessent: Modelling and proble-solving tas This saple is intended to infor the design of assessent instruents in
More informationSupport Vector Machine Classification of Uncertain and Imbalanced data using Robust Optimization
Recent Researches in Coputer Science Support Vector Machine Classification of Uncertain and Ibalanced data using Robust Optiization RAGHAV PAT, THEODORE B. TRAFALIS, KASH BARKER School of Industrial Engineering
More informationFRTF01 L8 Electrophysiology
FRTF01 L8 Electrophysiology Lecture Electrophysiology in general Recap: Linear Time Invariant systems (LTI) Examples of 1 and 2-dimensional systems Stability analysis The need for non-linear descriptions
More informationN-Point. DFTs of Two Length-N Real Sequences
Coputation of the DFT of In ost practical applications, sequences of interest are real In such cases, the syetry properties of the DFT given in Table 5. can be exploited to ake the DFT coputations ore
More informationAction Potential (AP) NEUROEXCITABILITY II-III. Na + and K + Voltage-Gated Channels. Voltage-Gated Channels. Voltage-Gated Channels
NEUROEXCITABILITY IIIII Action Potential (AP) enables longdistance signaling woohoo! shows threshold activation allornone in amplitude conducted without decrement caused by increase in conductance PNS
More informationProc. of the IEEE/OES Seventh Working Conference on Current Measurement Technology UNCERTAINTIES IN SEASONDE CURRENT VELOCITIES
Proc. of the IEEE/OES Seventh Working Conference on Current Measureent Technology UNCERTAINTIES IN SEASONDE CURRENT VELOCITIES Belinda Lipa Codar Ocean Sensors 15 La Sandra Way, Portola Valley, CA 98 blipa@pogo.co
More informationHysteresis model for magnetic materials using the Jiles-Atherton model
Hysteresis odel for agnetic aterials using the Jiles-Atherton odel Predrag Petrovic Technical faculty Svetog Save 65 32 Cacak, pegi@ei.yu Nebojsa itrovic Technical faculty Svetog Save 65 32 Cacak, itar@tfc.tfc.kg.ac.yu
More information9 Generation of Action Potential Hodgkin-Huxley Model
9 Generation of Action Potential Hodgkin-Huxley Model (based on chapter 2, W.W. Lytton, Hodgkin-Huxley Model) 9. Passive and active membrane models In the previous lecture we have considered a passive
More informationLimitations of the Hodgkin-Huxley Formalism: Effects of Single Channel Kinetics on Transmembrane Voltage Dynamics
ARTICLE Communicated by Idan Segev Limitations of the Hodgkin-Huxley Formalism: Effects of Single Channel Kinetics on Transmembrane Voltage Dynamics Adam F. Strassberg Computation and Neural Systems Program,
More informationKinetic Molecular Theory of Ideal Gases
Lecture -3. Kinetic Molecular Theory of Ideal Gases Last Lecture. IGL is a purely epirical law - solely the consequence of experiental obserations Explains the behaior of gases oer a liited range of conditions.
More informationPh 20.3 Numerical Solution of Ordinary Differential Equations
Ph 20.3 Nuerical Solution of Ordinary Differential Equations Due: Week 5 -v20170314- This Assignent So far, your assignents have tried to failiarize you with the hardware and software in the Physics Coputing
More informationProjectile Motion with Air Resistance (Numerical Modeling, Euler s Method)
Projectile Motion with Air Resistance (Nuerical Modeling, Euler s Method) Theory Euler s ethod is a siple way to approxiate the solution of ordinary differential equations (ode s) nuerically. Specifically,
More informationProbabilistic Modeling of Action Potential Generation by Neurons
Probabilistic Modeling of Action Potential Generation by Neurons Student: Bobby Sena under the direction of Professors Helen Wearing and Eric Toolson University of New Mexico bsena@unm.edu May 6, 21 Abstract
More informationChapter 11 Simple Harmonic Motion
Chapter 11 Siple Haronic Motion "We are to adit no ore causes of natural things than such as are both true and sufficient to explain their appearances." Isaac Newton 11.1 Introduction to Periodic Motion
More information