COMPSTAT2010 in Paris. Hiroki Motogaito. Masashi Goto
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1 COMPSTAT2010 in Paris Ensembled Multivariate Adaptive Regression Splines with Nonnegative Garrote Estimator t Hiroki Motogaito Osaka University Masashi Goto Biostatistical Research Association, NPO. JAPAN
2 Introduction and motivation Tree methods Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with nonnegative garrote Example and simulation Concluding remarks 2
3 Introduction and motivation Tree methods Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with nonnegative garrote Example and simulation Concluding remarks 3
4 Introduction and motivation Unstable Less interpretable f ˆf (x fˆ (x x f ˆ ( x Stabilizing i fˆ (x x MARS Bagging g (Friedman,1991 (Breiman,1996 Motivation a new version MARS that t has both stability and interpretability t 4
5 Introduction and motivation Tree methods Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with nonnegative garrote Example and simulation Concluding remarks 5
6 Multivariate i t Adaptive Regression Splines(Friedman,1991 i Model form Regression model M fˆ ˆ ˆ MARS 0 mb m (x m 1 Basis function K B m m (x [ i( k, m ( x p ( k, m t ( k, m k 1 B ( ] Algorithms 0.5 Forward stepwise 0.45 Increase basis functions Backward stepwise Prune off Select the best tree 基底関数数の値 [ p ( x 0.5 ] [ p q ( x 0.5 ] x x p q=1 1 and knot t= x p 6
7 Bagging g (Breiman,1996 Model form(bagging MARS Regression model Each tree 1 f ˆ ˆ E Bagging g MARS ( x ˆf f 1 e f e (x : MARS model E e 1 Algorithms Sample Bootstrap sample Bootstrap sample Bootstrap sample Bootstrap sample Bootstrap sample f ˆ 1 ( x f ˆf 2 ( x f ˆf ( x e fˆf E( ( x averaging fˆ (x 7
8 Introduction and motivation Previous research Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with nonnegative garrote Example and simulation Concluding remarks 8
9 Proposed method Motivation a new version MARS that has both stability and interpretability Stable, but less interpretable Stable and interpretable 3 2 Selection 4 1 & Ranking Typical tree Bagging nonnegative garrote (Breiman,1995 Proposed method 9
10 Ensembled MARS with non-negative negati e garrote(1/2 Model form Regression model Each tree E f ˆ ˆ ˆ ˆ ( x ( x ĉ :non-negative e c 1 e fe fe(x : MARS model, ce negative garrote estimator Algorithms Generate Bagging trees. Attach c ht t ˆ e on each tree and estimate c e using nonnegative garrote(breiman,1995. Select candidate trees(if cˆ e 0, the tree is removed. ˆ ˆ Get f E c ˆ f ( x e 1 e e. Interpretable structure through typical tree(max ĉc e 10
11 Ensembled MARS with non-negative negati e garrote(2/2 non-negative garrote (Breiman,1995 p N P P ( p 2 arg min Y c ˆ x ( n p p n 1 P { c p } 1 n 1 p 1 { cˆ } c 0, c s ˆ where is the least square estimator t and. p p P, subject to, 1 s P p 1 p Ensembled MARS with non-negative garrote N E E 2 ˆ 0 E arg min ( Yn ce f e ( n bj t t c 1 E e, ce { c } e 1 n 1 e 1 e 1 { cˆ } x 0 1 e where f ˆ e ( x n is MARS model., subject to, characteristics All c e 1 / E indicates Bagging. Selection of optimal s is unnecessary( s 1. 11
12 Introduction and motivation Previous research Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with non-negative negative garrote Example and simulation Concluding remarks 12
13 Literature example Prostate cancer data (Stamney et al.,1989: Tibshirani,1996 y : Level of prostate-specific t antigen x ( x x T 1,...,, 8 : Clinical measures x 1 : Log of tumor size x : Weight of prostate 2 x 3 : Patient s t age x 4 : Log of benign prostatic hyperplasia amount x 5 : Dummy variables of whether it is metastasizing to seminal vesicle x 6 : Log of capsular penetration x 7 : Gleason score x 8 : Gleason score s ratio of 4 or 5 Sample size : N 97 13
14 Literature example GC CV Ensembled MARS-NNG Bagging g MARS 14
15 Literature example Number of trees Bagging Ensembled MARS-NNG Structure 97 9 Bagging Ensembled MARS-NNG x1 x2 x 2 2 x x 4 x1 candidates Typical tree 15
16 Small simulation Design Model(Friedman, y 10 sin( x 20( , where is 1x2 x3 x4 x5 N (0,1 y where is. Training i sample size: 100 Testing sample size: 1,000 Number of simulation: 100 Method MARS, Bagging MARS, Ensembled MARS-NNG Evaluation MSESTD(Standardized di d mean square error 16
17 Small simulation 0.07 ESTD MSE Ensembled ed MARS-NNG Bagging MARS MARS Number 11.6 of trees (averaged
18 Introduction and motivation Previous research Multivariate i t Adaptive Regression Splines(MARS Bagging g MARS Our method proposed Agenda Ensembled MARS with non-negative negative garrote Example and simulation Concluding remarks 18
19 Concluding remarks We proposed p a new ensembled method of MARS. Our method proposed p is stable and interpretable. Ensembled MARS-NNG provided superior or comparable results to MARS and Bagging g MARS. 19
20 References Breiman, L. (1995 Better subset regression using the nonnegative garrote. Technometrics,, 37, , Breiman, L. (1996. Bagging predictors. Machine Learning, 24, Breiman, L., Friedman, J. H., Olshen, R. A. & Stone, C. J. (1984. Classification And Regression Trees. Wadsworth. Friedman, J. H. (1991 Multivariate Adaptive Regression Splines (with discussion. Annals of Statistics,19, Friedman, J. H. (2001. Greedy function approximation: a gradient boosting machine. Ann. Statist., 29(5, Meinshausen, N. (2009: Node Harvest: simple and interpretable regression and classification. Arxiv preprint arxiv: Motogaito, H., Sugimoto, T. & Goto, M. (2007: Multivariate Adaptive Regression Splines with Non-negative negative Garrote Estimator. Japanese J. Appl. Statist., ti t 36, (in Japanese. Yuan, M. & Lin, Y. (2007 On the non-negative negative garrote estimator. J. R. Statist. ti t Soc., B 69(2,
21 Thank you very much for your attention osaka-u acjp 21
22 Back up 22
23 Small simulation , Ensembled MARS-NNG Bagging g MARS MARS 23
24 Literature example x 1 x x8 x8 1 x 1 x x3 x 2 x 6 MARS 24
25 Literature example x 1 x2 x 2 2 x x 4 x1 Ensembled MARS-NNG 25
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