New Developments in East

Size: px
Start display at page:

Download "New Developments in East"

Transcription

1 New Developments in East MAMS: Multi-arm Multi-stage Trials Presented at the Fifth East User Group Meeting March 16, 2016 Cyrus Mehta, Ph.D. President, Cytel Inc

2 Multi-arm Multi-stage Designs Generaliza8on of group sequen8al design to more than two arms An alterna8ve to the combina8on func8on approach of Posch et. al. (SiM, 2005) Current implementa8on: trial stops if any arm crosses efficacy boundary trial stops if all arms cross fu8lity boundary drop the losers at each interim look Under development: dose selec8on and adap8ve SSR 2

3 Mathematical Framework K- look GSD Only 1 comparison to a control, made K 8mes K- look MAMS: K K D comparisons to common control, made K 8mes Generaliza8on of DunneR s test i 1 i 1 [ ] P ( I W < e and W e ) = α 0 j j i i i= 1 j= 1 [ ] P ( I max{w...w } < e and max{w...w } e ) = α 0 j1 jd j i1 id i i= 1 j= 1 3

4 Boundary Computations W sta8s8c e1 W1 e2 W2 W3 e3 Two Arm Trial: Look 1 Look 2 Look 3 W j, j=1,2,3, are scalers. Trial stops if W 1 e 1 or W 2 e 2 or W 3 e 3 We want P 0 (W 1 e 1 or W 2 e 2 or W 3 e 3 )=α Computa8ons are simplified because W j and (W j - W j- 1 ) are independent 4

5 Boundary Computations W sta8s8c e1 W1 e2 W2 W3 e3 Mul-- arm Trial: Look 1 Look 2 Look 3 W j =(W j1,w j2,...w jd ) are vectors. Trial stops if max(w 11,W 12,...W 1D ) e 1 or max(w 21,W 22,...W 2D ) e 2 or max(w 31,W 32,...W 3D ) e 3 Want P 0 {max(w 11,W 12,...W 1D ) e 1 or max(w 21,W 22,...W 2D ) e 2 or max(w 31,W 32,...W 3D ) e 3 }=α Computa8ons are complex because the components (W j1,w j2,...w jd ) are correlated whereas W j and (W j - W j- 1 ) are independent 5

6 Inhance Trial: Chronic Obstructive Pulmonary Disease Once daily bronchodilators for COPD (Am. J. Respiratory & Cri8cal Care, vol 182, 2010) Compare three doses (150 mg, 300 mg, 500 mg) of Indacaterol to Placebo Endpoint: Week 12 change from baseline in 24 hour trough FEV1 Expect differences from placebo of between 0.14 and 0.18 liters with standard devia8on σ=0.5 Design for 90% power at one- sided α=

7 Two-arm, Three-look GSD Requires 165 pa8ents/arm for δ=0.18, σ=0.5 Expected sample size under H1 is 132/arm 7

8 Four-arm, Three-look MAMS Requires 130 pa8ents/arm for δ=0.18, σ=0.5 Expected sample size under H1 is 104/arm 8

9 Compare the 2 arm and 4-arm boundaries 2- arm boundaries on Z- scale 4- arm boundaries on Z- scale 9

10 Higher hurdle with 4-arm trial Table of Boundary Comparisons Look Info Frac8on Two Arm Four Arm Plot of Boundary Comparisons

11 Boundary and Sample Size Comparison The boundaries for the 4- arm trial are higher than for the 2 arm trial This compensates for the greater probability of boundary crossing under H0 But the sample size/arm is lower for 4- arm trial. (More chances to exit under H1) What would happen if the value of δ was not the same for each treatment 11

12 4-arm design with different δ values Same boundaries, but requires commitment of 168/arm Expected sample size under H1 is 135/arm Here 4- arm design requires more pa8ents/arm than 2- arm design The higher efficacy boundary hurdle is not offset by extra opportuni8es to cross the efficacy boundary because only one dose has a strong effect 12

13 Introduce a futility boundary for 671patient trial with δ=(0.18,.14,.14) 13

14 Impact of futility boundary; 2% power drop Power dropped to 88% due to introduc8on of a fu8lity boundary The efficacy boundary is unchanged since fu8lity boundary is non- binding Trial stops for fu8lity only if ALL the arms cross the fu8lity boundary But individual arms that cross the fu-lity boundary will be dropped 14

15 Simulate trial for additional insight 15

16 More simulation details 16

17 Marginal and Detailed Outcome Tables 17

18 What if two treatments were ineffective 18

19 More simulation details 19

20 Marginal and detailed outcome tables 20

21 Simulation under the global null 21

22 Comparison with Existing Method East can compute efficacy and fu8lity boundaries for 6- arm 4- look STAMPEDE trial in 4 minutes (Sydes et al, 2009) Compare with Wason and Jaki (Sta8s8cs in Medicine, 2012) for 4- arm 4- look TAILOR trial: 22

23 Still being tested for East 6.4 Recompute boundaries if arms are dropped Make a dose selec8on at an interim look Increase sample size in promising zone at an interim look When this is complete, it will be possible to perform head- to- head comparison with 2- stage methods of Posch et al based on combining p- values and closed tes<ng which is also available in East

24 Future Development of MAMS Parameter Es8ma8on P- values Point es8mates Confidence Intervals This is s8ll an area of research 24

25 Reference Paper 25

Adaptive designs beyond p-value combination methods. Ekkehard Glimm, Novartis Pharma EAST user group meeting Basel, 31 May 2013

Adaptive designs beyond p-value combination methods. Ekkehard Glimm, Novartis Pharma EAST user group meeting Basel, 31 May 2013 Adaptive designs beyond p-value combination methods Ekkehard Glimm, Novartis Pharma EAST user group meeting Basel, 31 May 2013 Outline Introduction Combination-p-value method and conditional error function

More information

Type I error rate control in adaptive designs for confirmatory clinical trials with treatment selection at interim

Type I error rate control in adaptive designs for confirmatory clinical trials with treatment selection at interim Type I error rate control in adaptive designs for confirmatory clinical trials with treatment selection at interim Frank Bretz Statistical Methodology, Novartis Joint work with Martin Posch (Medical University

More information

Group sequential designs for Clinical Trials with multiple treatment arms

Group sequential designs for Clinical Trials with multiple treatment arms Group sequential designs for Clinical Trials with multiple treatment arms Susanne Urach, Martin Posch Cologne, June 26, 2015 This project has received funding from the European Union s Seventh Framework

More information

Bios 6649: Clinical Trials - Statistical Design and Monitoring

Bios 6649: Clinical Trials - Statistical Design and Monitoring Bios 6649: Clinical Trials - Statistical Design and Monitoring Spring Semester 2015 John M. Kittelson Department of Biostatistics & Informatics Colorado School of Public Health University of Colorado Denver

More information

Pubh 8482: Sequential Analysis

Pubh 8482: Sequential Analysis Pubh 8482: Sequential Analysis Joseph S. Koopmeiners Division of Biostatistics University of Minnesota Week 10 Class Summary Last time... We began our discussion of adaptive clinical trials Specifically,

More information

Confidence intervals and point estimates for adaptive group sequential trials

Confidence intervals and point estimates for adaptive group sequential trials Confidence intervals and point estimates for adaptive group sequential trials Lingyun Liu, Ph.D. Cytel Inc. August 02, 2011 Miami, FL Lingyun Liu (Cytel Inc.) JSM August 02, 2011 Miami, FL 1 / 19 Acknowledgement

More information

Designing multi-arm multi-stage clinical trials using a risk-benefit criterion for treatment selection

Designing multi-arm multi-stage clinical trials using a risk-benefit criterion for treatment selection Research Article Statistics Received XXXX (www.interscience.wiley.com) DOI: 10.1002/sim.0000 Designing multi-arm multi-stage clinical trials using a risk-benefit criterion for treatment selection Thomas

More information

PSI Journal Club March 10 th, 2016

PSI Journal Club March 10 th, 2016 PSI Journal Club March 1 th, 1 The analysis of incontinence episodes and other count data in patients with Overactive Bladder (OAB) by Poisson and negative binomial regression Martina R, Kay R, van Maanen

More information

Statistical Aspects of Futility Analyses. Kevin J Carroll. nd 2013

Statistical Aspects of Futility Analyses. Kevin J Carroll. nd 2013 Statistical Aspects of Futility Analyses Kevin J Carroll March Spring 222013 nd 2013 1 Contents Introduction The Problem in Statistical Terms Defining Futility Three Common Futility Rules The Maths An

More information

clinical trials Abstract Multi-arm multi-stage (MAMS) trials can improve the efficiency of the drug

clinical trials Abstract Multi-arm multi-stage (MAMS) trials can improve the efficiency of the drug A multi-stage drop-the-losers design for multi-arm clinical trials James Wason 1, Nigel Stallard 2, Jack Bowden 1, and Christopher Jennison 3 1 MRC Biostatistics Unit, Cambridge 2 Warwick Medical School,

More information

Data Processing Techniques

Data Processing Techniques Universitas Gadjah Mada Department of Civil and Environmental Engineering Master in Engineering in Natural Disaster Management Data Processing Techniques Hypothesis Tes,ng 1 Hypothesis Testing Mathema,cal

More information

Overrunning in Clinical Trials: a Methodological Review

Overrunning in Clinical Trials: a Methodological Review Overrunning in Clinical Trials: a Methodological Review Dario Gregori Unit of Biostatistics, Epidemiology and Public Health Department of Cardiac, Thoracic and Vascular Sciences dario.gregori@unipd.it

More information

Cytel Inc.: Jim Bolognese, Jaydeep BhaHacharyya, Ni3n Patel Client Staff: (proprietary) 03Dec2013

Cytel Inc.: Jim Bolognese, Jaydeep BhaHacharyya, Ni3n Patel Client Staff: (proprietary) 03Dec2013 Clinical Development Program Op3miza3on by Simula3on: Phase 1b Biomarker PoC + Dose- Finding à Phase 2b Clinical Endpoint Dose- Finding à Phase 3 Dose- Choice Cytel Inc.: Jim Bolognese, Jaydeep BhaHacharyya,

More information

SAMPLE SIZE RE-ESTIMATION FOR ADAPTIVE SEQUENTIAL DESIGN IN CLINICAL TRIALS

SAMPLE SIZE RE-ESTIMATION FOR ADAPTIVE SEQUENTIAL DESIGN IN CLINICAL TRIALS Journal of Biopharmaceutical Statistics, 18: 1184 1196, 2008 Copyright Taylor & Francis Group, LLC ISSN: 1054-3406 print/1520-5711 online DOI: 10.1080/10543400802369053 SAMPLE SIZE RE-ESTIMATION FOR ADAPTIVE

More information

T- test recap. Week 7. One- sample t- test. One- sample t- test 5/13/12. t = x " µ s x. One- sample t- test Paired t- test Independent samples t- test

T- test recap. Week 7. One- sample t- test. One- sample t- test 5/13/12. t = x  µ s x. One- sample t- test Paired t- test Independent samples t- test T- test recap Week 7 One- sample t- test Paired t- test Independent samples t- test T- test review Addi5onal tests of significance: correla5ons, qualita5ve data In each case, we re looking to see whether

More information

Pubh 8482: Sequential Analysis

Pubh 8482: Sequential Analysis Pubh 8482: Sequential Analysis Joseph S. Koopmeiners Division of Biostatistics University of Minnesota Week 12 Review So far... We have discussed the role of phase III clinical trials in drug development

More information

CS 6140: Machine Learning Spring What We Learned Last Week. Survey 2/26/16. VS. Model

CS 6140: Machine Learning Spring What We Learned Last Week. Survey 2/26/16. VS. Model Logis@cs CS 6140: Machine Learning Spring 2016 Instructor: Lu Wang College of Computer and Informa@on Science Northeastern University Webpage: www.ccs.neu.edu/home/luwang Email: luwang@ccs.neu.edu Assignment

More information

CS 6140: Machine Learning Spring 2016

CS 6140: Machine Learning Spring 2016 CS 6140: Machine Learning Spring 2016 Instructor: Lu Wang College of Computer and Informa?on Science Northeastern University Webpage: www.ccs.neu.edu/home/luwang Email: luwang@ccs.neu.edu Logis?cs Assignment

More information

REGRESSION AND CORRELATION ANALYSIS

REGRESSION AND CORRELATION ANALYSIS Problem 1 Problem 2 A group of 625 students has a mean age of 15.8 years with a standard devia>on of 0.6 years. The ages are normally distributed. How many students are younger than 16.2 years? REGRESSION

More information

Analysis of Longitudinal Data. Patrick J. Heagerty PhD Department of Biostatistics University of Washington

Analysis of Longitudinal Data. Patrick J. Heagerty PhD Department of Biostatistics University of Washington Analysis of Longitudinal Data Patrick J Heagerty PhD Department of Biostatistics University of Washington Auckland 8 Session One Outline Examples of longitudinal data Scientific motivation Opportunities

More information

Sample Size Determination

Sample Size Determination Sample Size Determination 018 The number of subjects in a clinical study should always be large enough to provide a reliable answer to the question(s addressed. The sample size is usually determined by

More information

Testing a Primary and a Secondary Endpoint in a Confirmatory Group Sequential Clinical Trial

Testing a Primary and a Secondary Endpoint in a Confirmatory Group Sequential Clinical Trial Testing a Primary and a Secondary Endpoint in a Confirmatory Group Sequential Clinical Trial ExL Pharma Workshop 2010 Rockville, MD Cyrus R. Mehta President, Cytel Corporation January 26, 2010 email: mehta@cytel.com

More information

CHL 5225H Advanced Statistical Methods for Clinical Trials: Multiplicity

CHL 5225H Advanced Statistical Methods for Clinical Trials: Multiplicity CHL 5225H Advanced Statistical Methods for Clinical Trials: Multiplicity Prof. Kevin E. Thorpe Dept. of Public Health Sciences University of Toronto Objectives 1. Be able to distinguish among the various

More information

Sta$s$cal Significance Tes$ng In Theory and In Prac$ce

Sta$s$cal Significance Tes$ng In Theory and In Prac$ce Sta$s$cal Significance Tes$ng In Theory and In Prac$ce Ben Cartere8e University of Delaware h8p://ir.cis.udel.edu/ictir13tutorial Hypotheses and Experiments Hypothesis: Using an SVM for classifica$on will

More information

Adaptive Extensions of a Two-Stage Group Sequential Procedure for Testing a Primary and a Secondary Endpoint (II): Sample Size Re-estimation

Adaptive Extensions of a Two-Stage Group Sequential Procedure for Testing a Primary and a Secondary Endpoint (II): Sample Size Re-estimation Research Article Received XXXX (www.interscience.wiley.com) DOI: 10.100/sim.0000 Adaptive Extensions of a Two-Stage Group Sequential Procedure for Testing a Primary and a Secondary Endpoint (II): Sample

More information

Interim Monitoring of Clinical Trials: Decision Theory, Dynamic Programming. and Optimal Stopping

Interim Monitoring of Clinical Trials: Decision Theory, Dynamic Programming. and Optimal Stopping Interim Monitoring of Clinical Trials: Decision Theory, Dynamic Programming and Optimal Stopping Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj

More information

Optimising Group Sequential Designs. Decision Theory, Dynamic Programming. and Optimal Stopping

Optimising Group Sequential Designs. Decision Theory, Dynamic Programming. and Optimal Stopping : Decision Theory, Dynamic Programming and Optimal Stopping Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj InSPiRe Conference on Methodology

More information

Testing a secondary endpoint after a group sequential test. Chris Jennison. 9th Annual Adaptive Designs in Clinical Trials

Testing a secondary endpoint after a group sequential test. Chris Jennison. 9th Annual Adaptive Designs in Clinical Trials Testing a secondary endpoint after a group sequential test Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj 9th Annual Adaptive Designs in

More information

with the usual assumptions about the error term. The two values of X 1 X 2 0 1

with the usual assumptions about the error term. The two values of X 1 X 2 0 1 Sample questions 1. A researcher is investigating the effects of two factors, X 1 and X 2, each at 2 levels, on a response variable Y. A balanced two-factor factorial design is used with 1 replicate. The

More information

Exact Inference for Adaptive Group Sequential Designs

Exact Inference for Adaptive Group Sequential Designs STATSTCS N MEDCNE Statist. Med. 2013; 00:1 [Version: 2002/09/18 v1.11] Exact nference for Adaptive Group Sequential Designs Ping Gao 1, Lingyun Liu 2, Cyrus R. Mehta 2,3 1 The Medicines Company, 2 Cytel

More information

Adaptive Designs: Why, How and When?

Adaptive Designs: Why, How and When? Adaptive Designs: Why, How and When? Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj ISBS Conference Shanghai, July 2008 1 Adaptive designs:

More information

Monitoring clinical trial outcomes with delayed response: incorporating pipeline data in group sequential designs. Christopher Jennison

Monitoring clinical trial outcomes with delayed response: incorporating pipeline data in group sequential designs. Christopher Jennison Monitoring clinical trial outcomes with delayed response: incorporating pipeline data in group sequential designs Christopher Jennison Department of Mathematical Sciences, University of Bath http://people.bath.ac.uk/mascj

More information

The Design of Group Sequential Clinical Trials that Test Multiple Endpoints

The Design of Group Sequential Clinical Trials that Test Multiple Endpoints The Design of Group Sequential Clinical Trials that Test Multiple Endpoints Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj Bruce Turnbull

More information

Estimation in Flexible Adaptive Designs

Estimation in Flexible Adaptive Designs Estimation in Flexible Adaptive Designs Werner Brannath Section of Medical Statistics Core Unit for Medical Statistics and Informatics Medical University of Vienna BBS and EFSPI Scientific Seminar on Adaptive

More information

Linear Regression and Correla/on. Correla/on and Regression Analysis. Three Ques/ons 9/14/14. Chapter 13. Dr. Richard Jerz

Linear Regression and Correla/on. Correla/on and Regression Analysis. Three Ques/ons 9/14/14. Chapter 13. Dr. Richard Jerz Linear Regression and Correla/on Chapter 13 Dr. Richard Jerz 1 Correla/on and Regression Analysis Correla/on Analysis is the study of the rela/onship between variables. It is also defined as group of techniques

More information

Linear Regression and Correla/on

Linear Regression and Correla/on Linear Regression and Correla/on Chapter 13 Dr. Richard Jerz 1 Correla/on and Regression Analysis Correla/on Analysis is the study of the rela/onship between variables. It is also defined as group of techniques

More information

Group Sequential Tests for Delayed Responses. Christopher Jennison. Lisa Hampson. Workshop on Special Topics on Sequential Methodology

Group Sequential Tests for Delayed Responses. Christopher Jennison. Lisa Hampson. Workshop on Special Topics on Sequential Methodology Group Sequential Tests for Delayed Responses Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj Lisa Hampson Department of Mathematics and Statistics,

More information

Some Review and Hypothesis Tes4ng. Friday, March 15, 13

Some Review and Hypothesis Tes4ng. Friday, March 15, 13 Some Review and Hypothesis Tes4ng Outline Discussing the homework ques4ons from Joey and Phoebe Review of Sta4s4cal Inference Proper4es of OLS under the normality assump4on Confidence Intervals, T test,

More information

Technical Manual. 1 Introduction. 1.1 Version. 1.2 Developer

Technical Manual. 1 Introduction. 1.1 Version. 1.2 Developer Technical Manual 1 Introduction 1 2 TraditionalSampleSize module: Analytical calculations in fixed-sample trials 3 3 TraditionalSimulations module: Simulation-based calculations in fixed-sample trials

More information

Harmonic Regression in the Biological Setting. Michael Gaffney, Ph.D., Pfizer Inc

Harmonic Regression in the Biological Setting. Michael Gaffney, Ph.D., Pfizer Inc Harmonic Regression in the Biological Setting Michael Gaffney, Ph.D., Pfizer Inc Two primary aims of harmonic regression 1. To describe the timing (phase) or degree of the diurnal variation (amplitude)

More information

Group Sequential Designs: Theory, Computation and Optimisation

Group Sequential Designs: Theory, Computation and Optimisation Group Sequential Designs: Theory, Computation and Optimisation Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj 8th International Conference

More information

Adaptive, graph based multiple testing procedures and a uniform improvement of Bonferroni type tests.

Adaptive, graph based multiple testing procedures and a uniform improvement of Bonferroni type tests. 1/35 Adaptive, graph based multiple testing procedures and a uniform improvement of Bonferroni type tests. Martin Posch Center for Medical Statistics, Informatics and Intelligent Systems Medical University

More information

Sample size re-estimation in clinical trials. Dealing with those unknowns. Chris Jennison. University of Kyoto, January 2018

Sample size re-estimation in clinical trials. Dealing with those unknowns. Chris Jennison. University of Kyoto, January 2018 Sample Size Re-estimation in Clinical Trials: Dealing with those unknowns Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj University of Kyoto,

More information

Group sequential designs for negative binomial outcomes

Group sequential designs for negative binomial outcomes Group sequential designs for negative binomial outcomes Tobias Mütze a, Ekkehard Glimm b,c, Heinz Schmidli b, and Tim Friede a,d a Department of Medical Statistics, University Medical Center Göttingen,

More information

Case Study in the Use of Bayesian Hierarchical Modeling and Simulation for Design and Analysis of a Clinical Trial

Case Study in the Use of Bayesian Hierarchical Modeling and Simulation for Design and Analysis of a Clinical Trial Case Study in the Use of Bayesian Hierarchical Modeling and Simulation for Design and Analysis of a Clinical Trial William R. Gillespie Pharsight Corporation Cary, North Carolina, USA PAGE 2003 Verona,

More information

A Gatekeeping Test on a Primary and a Secondary Endpoint in a Group Sequential Design with Multiple Interim Looks

A Gatekeeping Test on a Primary and a Secondary Endpoint in a Group Sequential Design with Multiple Interim Looks A Gatekeeping Test in a Group Sequential Design 1 A Gatekeeping Test on a Primary and a Secondary Endpoint in a Group Sequential Design with Multiple Interim Looks Ajit C. Tamhane Department of Industrial

More information

Comparing Adaptive Designs and the. Classical Group Sequential Approach. to Clinical Trial Design

Comparing Adaptive Designs and the. Classical Group Sequential Approach. to Clinical Trial Design Comparing Adaptive Designs and the Classical Group Sequential Approach to Clinical Trial Design Christopher Jennison Department of Mathematical Sciences, University of Bath, UK http://people.bath.ac.uk/mascj

More information

Blinded sample size reestimation with count data

Blinded sample size reestimation with count data Blinded sample size reestimation with count data Tim Friede 1 and Heinz Schmidli 2 1 Universtiy Medical Center Göttingen, Germany 2 Novartis Pharma AG, Basel, Switzerland BBS Early Spring Conference 2010

More information

An extrapolation framework to specify requirements for drug development in children

An extrapolation framework to specify requirements for drug development in children An framework to specify requirements for drug development in children Martin Posch joint work with Gerald Hlavin Franz König Christoph Male Peter Bauer Medical University of Vienna Clinical Trials in Small

More information

DART Tutorial Sec'on 1: Filtering For a One Variable System

DART Tutorial Sec'on 1: Filtering For a One Variable System DART Tutorial Sec'on 1: Filtering For a One Variable System UCAR The Na'onal Center for Atmospheric Research is sponsored by the Na'onal Science Founda'on. Any opinions, findings and conclusions or recommenda'ons

More information

CTP-656 Tablet Confirmed Superiority Of Pharmacokinetic Profile Relative To Kalydeco in Phase I Clinical Studies

CTP-656 Tablet Confirmed Superiority Of Pharmacokinetic Profile Relative To Kalydeco in Phase I Clinical Studies Tablet Confirmed Superiority Of Pharmacokinetic Profile Relative To Kalydeco in Phase I Clinical Studies 39 th European Cystic Fibrosis Conference 8-11 June 2016, Basel, Switzerland 2014 Concert Pharmaceuticals,

More information

Bias in Arc*c Ocean SST Retrieval from Metop- A AVHRR. C J Merchant University of Reading

Bias in Arc*c Ocean SST Retrieval from Metop- A AVHRR. C J Merchant University of Reading Bias in Arc*c Ocean SST Retrieval from Metop- A AVHRR C J Merchant University of Reading Introduc*on Percep*on that SST retrieval biases are poor in Arc*c Retrieval informed by simula*ons helps reduce

More information

Introduc)on to the Design and Analysis of Experiments. Violet R. Syro)uk School of Compu)ng, Informa)cs, and Decision Systems Engineering

Introduc)on to the Design and Analysis of Experiments. Violet R. Syro)uk School of Compu)ng, Informa)cs, and Decision Systems Engineering Introduc)on to the Design and Analysis of Experiments Violet R. Syro)uk School of Compu)ng, Informa)cs, and Decision Systems Engineering 1 Complex Engineered Systems What makes an engineered system complex?

More information

Class Notes. Examining Repeated Measures Data on Individuals

Class Notes. Examining Repeated Measures Data on Individuals Ronald Heck Week 12: Class Notes 1 Class Notes Examining Repeated Measures Data on Individuals Generalized linear mixed models (GLMM) also provide a means of incorporang longitudinal designs with categorical

More information

Computer Vision. Pa0ern Recogni4on Concepts Part I. Luis F. Teixeira MAP- i 2012/13

Computer Vision. Pa0ern Recogni4on Concepts Part I. Luis F. Teixeira MAP- i 2012/13 Computer Vision Pa0ern Recogni4on Concepts Part I Luis F. Teixeira MAP- i 2012/13 What is it? Pa0ern Recogni4on Many defini4ons in the literature The assignment of a physical object or event to one of

More information

Two-stage k-sample designs for the ordered alternative problem

Two-stage k-sample designs for the ordered alternative problem Two-stage k-sample designs for the ordered alternative problem Guogen Shan, Alan D. Hutson, and Gregory E. Wilding Department of Biostatistics,University at Buffalo, Buffalo, NY 14214, USA July 18, 2011

More information

Genera&ng velocity solu&ons with GLOBK

Genera&ng velocity solu&ons with GLOBK Genera&ng velocity solu&ons with GLOBK T. A. Herring M. A. Floyd Massachuse(s Ins,tute of Technology GAMIT/GLOBK/TRACK Short Course for GPS Data Analysis Korea Ins&tute of Geoscience and Mineral Resources

More information

Superchain Procedures in Clinical Trials. George Kordzakhia FDA, CDER, Office of Biostatistics Alex Dmitrienko Quintiles Innovation

Superchain Procedures in Clinical Trials. George Kordzakhia FDA, CDER, Office of Biostatistics Alex Dmitrienko Quintiles Innovation August 01, 2012 Disclaimer: This presentation reflects the views of the author and should not be construed to represent the views or policies of the U.S. Food and Drug Administration Introduction We describe

More information

Repeated confidence intervals for adaptive group sequential trials

Repeated confidence intervals for adaptive group sequential trials STATISTICS IN MEDICINE Statist. Med. 2007; 26:5422 5433 Published online 4 October 2007 in Wiley InterScience (www.interscience.wiley.com).3062 Repeated confidence intervals for adaptive group sequential

More information

Random Variable. Discrete Random Variable. Continuous Random Variable. Discrete Random Variable. Discrete Probability Distribution

Random Variable. Discrete Random Variable. Continuous Random Variable. Discrete Random Variable. Discrete Probability Distribution Random Variable Theoretical Probability Distribution Random Variable Discrete Probability Distributions A variable that assumes a numerical description for the outcome of a random eperiment (by chance).

More information

Comparison of Different Methods of Sample Size Re-estimation for Therapeutic Equivalence (TE) Studies Protecting the Overall Type 1 Error

Comparison of Different Methods of Sample Size Re-estimation for Therapeutic Equivalence (TE) Studies Protecting the Overall Type 1 Error Comparison of Different Methods of Sample Size Re-estimation for Therapeutic Equivalence (TE) Studies Protecting the Overall Type 1 Error by Diane Potvin Outline 1. Therapeutic Equivalence Designs 2. Objectives

More information

Adaptive Prediction of Event Times in Clinical Trials

Adaptive Prediction of Event Times in Clinical Trials Adaptive Prediction of Event Times in Clinical Trials Yu Lan Southern Methodist University Advisor: Daniel F. Heitjan May 8, 2017 Yu Lan (SMU) May 8, 2017 1 / 19 Clinical Trial Prediction Event-based trials:

More information

Multiple Testing in Group Sequential Clinical Trials

Multiple Testing in Group Sequential Clinical Trials Multiple Testing in Group Sequential Clinical Trials Tian Zhao Supervisor: Michael Baron Department of Mathematical Sciences University of Texas at Dallas txz122@utdallas.edu 7/2/213 1 Sequential statistics

More information

Designs for Clinical Trials

Designs for Clinical Trials Designs for Clinical Trials Chapter 5 Reading Instructions 5.: Introduction 5.: Parallel Group Designs (read) 5.3: Cluster Randomized Designs (less important) 5.4: Crossover Designs (read+copies) 5.5:

More information

Bayesian Nonparametric Accelerated Failure Time Models for Analyzing Heterogeneous Treatment Effects

Bayesian Nonparametric Accelerated Failure Time Models for Analyzing Heterogeneous Treatment Effects Bayesian Nonparametric Accelerated Failure Time Models for Analyzing Heterogeneous Treatment Effects Nicholas C. Henderson Thomas A. Louis Gary Rosner Ravi Varadhan Johns Hopkins University September 28,

More information

Practice of SAS Logistic Regression on Binary Pharmacodynamic Data Problems and Solutions. Alan J Xiao, Cognigen Corporation, Buffalo NY

Practice of SAS Logistic Regression on Binary Pharmacodynamic Data Problems and Solutions. Alan J Xiao, Cognigen Corporation, Buffalo NY Practice of SAS Logistic Regression on Binary Pharmacodynamic Data Problems and Solutions Alan J Xiao, Cognigen Corporation, Buffalo NY ABSTRACT Logistic regression has been widely applied to population

More information

Finding Critical Values with Prefixed Early. Stopping Boundaries and Controlled Type I. Error for A Two-Stage Adaptive Design

Finding Critical Values with Prefixed Early. Stopping Boundaries and Controlled Type I. Error for A Two-Stage Adaptive Design Finding Critical Values with Prefixed Early Stopping Boundaries and Controlled Type I Error for A Two-Stage Adaptive Design Jingjing Chen 1, Sanat K. Sarkar 2, and Frank Bretz 3 September 27, 2009 1 ClinForce-GSK

More information

Maximum type 1 error rate inflation in multiarmed clinical trials with adaptive interim sample size modifications

Maximum type 1 error rate inflation in multiarmed clinical trials with adaptive interim sample size modifications 64 Biometrical Journal 56 24 4, 64 63 DOI:.2/bimj.2353 Maximum type error rate inflation in multiarmed clinical trials with adaptive interim sample size modifications Alexandra C. Graf,2, Peter Bauer,

More information

Applied Time Series Analysis FISH 507. Eric Ward Mark Scheuerell Eli Holmes

Applied Time Series Analysis FISH 507. Eric Ward Mark Scheuerell Eli Holmes Applied Time Series Analysis FISH 507 Eric Ward Mark Scheuerell Eli Holmes Introduc;ons Who are we? Who & why you re here? What are you looking to get from this class? Days and Times Lectures When: Tues

More information

Adaptive Dunnett Tests for Treatment Selection

Adaptive Dunnett Tests for Treatment Selection s for Treatment Selection Franz König 1 Werner Brannath 1 Frank Bretz 2 Martin Posch 1 1 Section of Medical Statistics Medical University of Vienna 2 Novartis Pharma AG Basel Workshop Adaptive Designs

More information

METHODS OF EVALUATION OF PERFORMANCE OF ADAPTIVE DESIGNS ON TREATMENT EFFECT INTERVALS AND METHODS OF

METHODS OF EVALUATION OF PERFORMANCE OF ADAPTIVE DESIGNS ON TREATMENT EFFECT INTERVALS AND METHODS OF METHODS OF EVALUATION OF PERFORMANCE OF ADAPTIVE DESIGNS ON TREATMENT EFFECT INTERVALS AND METHODS OF DESIGNING TWO-STAGE WINNER DESIGNS WITH SURVIVAL OUTCOMES BY FANG FANG A dissertation submitted to

More information

Bayesian variable selection for identifying subgroups in cost-effectiveness analysis

Bayesian variable selection for identifying subgroups in cost-effectiveness analysis Bayesian variable selection for identifying subgroups in cost-effectiveness analysis Elías Moreno 1 Francisco Javier Girón 2 Francisco José Vázquez Polo 3 Miguel Negrín 3 1 University of Granada, Spain

More information

Original citation: Kimani, Peter K., Todd, Susan and Stallard, Nigel. (03) Conditionally unbiased estimation in phase II/III clinical trials with early stopping for futility. Statistics in Medicine. ISSN

More information

Practical issues related to the use of biomarkers in a seamless Phase II/III design

Practical issues related to the use of biomarkers in a seamless Phase II/III design Practical issues related to the use of biomarkers in a seamless Phase II/III design Tomasz Burzykowski International Drug Development Institute Louvain-la-Neuve, Belgium tomasz.burzykowski@iddi.be www.iddi.com

More information

Streaming - 2. Bloom Filters, Distinct Item counting, Computing moments. credits:www.mmds.org.

Streaming - 2. Bloom Filters, Distinct Item counting, Computing moments. credits:www.mmds.org. Streaming - 2 Bloom Filters, Distinct Item counting, Computing moments credits:www.mmds.org http://www.mmds.org Outline More algorithms for streams: 2 Outline More algorithms for streams: (1) Filtering

More information

BINF 702 SPRING Chapter 8 Hypothesis Testing: Two-Sample Inference. BINF702 SPRING 2014 Chapter 8 Hypothesis Testing: Two- Sample Inference 1

BINF 702 SPRING Chapter 8 Hypothesis Testing: Two-Sample Inference. BINF702 SPRING 2014 Chapter 8 Hypothesis Testing: Two- Sample Inference 1 BINF 702 SPRING 2014 Chapter 8 Hypothesis Testing: Two-Sample Inference Two- Sample Inference 1 A Poster Child for two-sample hypothesis testing Ex 8.1 Obstetrics In the birthweight data in Example 7.2,

More information

Optimal rejection regions for testing multiple binary endpoints in small samples

Optimal rejection regions for testing multiple binary endpoints in small samples Optimal rejection regions for testing multiple binary endpoints in small samples Robin Ristl and Martin Posch Section for Medical Statistics, Center of Medical Statistics, Informatics and Intelligent Systems,

More information

Short introduc,on to the

Short introduc,on to the OXFORD NEUROIMAGING PRIMERS Short introduc,on to the An General Introduction Linear Model to Neuroimaging for Neuroimaging Analysis Mark Jenkinson Mark Jenkinson Janine Michael Bijsterbosch Chappell Michael

More information

Hypothesis Testing, Power, Sample Size and Confidence Intervals (Part 2)

Hypothesis Testing, Power, Sample Size and Confidence Intervals (Part 2) Hypothesis Testing, Power, Sample Size and Confidence Intervals (Part 2) B.H. Robbins Scholars Series June 23, 2010 1 / 29 Outline Z-test χ 2 -test Confidence Interval Sample size and power Relative effect

More information

Valida&on of Predic&ve Classifiers

Valida&on of Predic&ve Classifiers Valida&on of Predic&ve Classifiers 1! Predic&ve Biomarker Classifiers In most posi&ve clinical trials, only a small propor&on of the eligible popula&on benefits from the new rx Many chronic diseases are

More information

NCCTG Status Report for Study N May 2010

NCCTG Status Report for Study N May 2010 Phase II Trial of Pharmacogenetic-Based Dosing of Irinotecan, Oxaliplatin, and Capecitabine as First-Line Therapy for dvanced Small Bowel denocarcinoma Purpose of - Primary Goal Study: 1) To assess the

More information

Monitoring clinical trial outcomes with delayed response: Incorporating pipeline data in group sequential and adaptive designs. Christopher Jennison

Monitoring clinical trial outcomes with delayed response: Incorporating pipeline data in group sequential and adaptive designs. Christopher Jennison Monitoring clinical trial outcomes with delayed response: Incorporating pipeline data in group sequential and adaptive designs Christopher Jennison Department of Mathematical Sciences, University of Bath,

More information

Dose-response modeling with bivariate binary data under model uncertainty

Dose-response modeling with bivariate binary data under model uncertainty Dose-response modeling with bivariate binary data under model uncertainty Bernhard Klingenberg 1 1 Department of Mathematics and Statistics, Williams College, Williamstown, MA, 01267 and Institute of Statistics,

More information

Understanding the Individual Contributions to Multivariate Outliers in Assessments of Data Quality

Understanding the Individual Contributions to Multivariate Outliers in Assessments of Data Quality Understanding the Individual Contributions to Multivariate Outliers in Assessments of Data Quality Richard C. Zink, Ph.D. Senior Director, Data Management and Statistics TARGET PharmaSolutions Inc. rzink@targetpharmasolutions.com

More information

Friday, March 15, 13. Mul$ple Regression

Friday, March 15, 13. Mul$ple Regression Mul$ple Regression Mul$ple Regression I have a hypothesis about the effect of X on Y. Why might we need addi$onal variables? Confounding variables Condi$onal independence Reduce/eliminate bias in es$mates

More information

Natural Language Processing with Deep Learning. CS224N/Ling284

Natural Language Processing with Deep Learning. CS224N/Ling284 Natural Language Processing with Deep Learning CS224N/Ling284 Lecture 4: Word Window Classification and Neural Networks Christopher Manning and Richard Socher Classifica6on setup and nota6on Generally

More information

The Role of Operating Characteristics in Assesing Bayesian Designs in Pharmaceutical Development

The Role of Operating Characteristics in Assesing Bayesian Designs in Pharmaceutical Development The Role of Operating Characteristics in Assesing Bayesian Designs in Pharmaceutical Development Professor Andy Grieve SVP Clinical Trials Methodology Innovation Centre, Aptiv Solutions GmbH Cologne, Germany

More information

Group sequential designs with negative binomial data

Group sequential designs with negative binomial data Group sequential designs with negative binomial data Ekkehard Glimm 1 Tobias Mütze 2,3 1 Statistical Methodology, Novartis, Basel, Switzerland 2 Department of Medical Statistics, University Medical Center

More information

PubH 7470: STATISTICS FOR TRANSLATIONAL & CLINICAL RESEARCH

PubH 7470: STATISTICS FOR TRANSLATIONAL & CLINICAL RESEARCH PubH 7470: STATISTICS FOR TRANSLATIONAL & CLINICAL RESEARCH The First Step: SAMPLE SIZE DETERMINATION THE ULTIMATE GOAL The most important, ultimate step of any of clinical research is to do draw inferences;

More information

Sociology 301. Hypothesis Testing + t-test for Comparing Means. Hypothesis Testing. Hypothesis Testing. Liying Luo 04.14

Sociology 301. Hypothesis Testing + t-test for Comparing Means. Hypothesis Testing. Hypothesis Testing. Liying Luo 04.14 Sociology 301 Hypothesis Testing + t-test for Comparing Means Liying Luo 04.14 Hypothesis Testing 5. State a technical decision and a substan;ve conclusion Hypothesis Testing A random sample of 100 UD

More information

Bios 6648: Design & conduct of clinical research

Bios 6648: Design & conduct of clinical research Bios 6648: Design & conduct of clinical research Section 2 - Formulating the scientific and statistical design designs 2.5(b) Binary 2.5(c) Skewed baseline (a) Time-to-event (revisited) (b) Binary (revisited)

More information

Courtesy of Jes Jørgensen

Courtesy of Jes Jørgensen Courtesy of Jes Jørgensen Testing Models 3 May 2016 Science is all about models Use physical mechanisms to predict outcomes Test the outcomes in order to test our understanding of the physics Science is

More information

Probability Methods in Civil Engineering Prof. Dr. Rajib Maity Department of Civil Engineering Indian Institution of Technology, Kharagpur

Probability Methods in Civil Engineering Prof. Dr. Rajib Maity Department of Civil Engineering Indian Institution of Technology, Kharagpur Probability Methods in Civil Engineering Prof. Dr. Rajib Maity Department of Civil Engineering Indian Institution of Technology, Kharagpur Lecture No. # 36 Sampling Distribution and Parameter Estimation

More information

Statistics in medicine

Statistics in medicine Statistics in medicine Lecture 3: Bivariate association : Categorical variables Proportion in one group One group is measured one time: z test Use the z distribution as an approximation to the binomial

More information

Group-Sequential Tests for One Proportion in a Fleming Design

Group-Sequential Tests for One Proportion in a Fleming Design Chapter 126 Group-Sequential Tests for One Proportion in a Fleming Design Introduction This procedure computes power and sample size for the single-arm group-sequential (multiple-stage) designs of Fleming

More information

2 >1. That is, a parallel study design will require

2 >1. That is, a parallel study design will require Cross Over Design Cross over design is commonly used in various type of research for its unique feature of accounting for within subject variability. For studies with short length of treatment time, illness

More information

Model Selection versus Model Averaging in Dose Finding Studies

Model Selection versus Model Averaging in Dose Finding Studies Model Selection versus Model Averaging in Dose Finding Studies Schorning, Kirsten Ruhr-Universität Bochum Bornkamp, Björn Novartis Pharma AG arxiv:8.00281v1 [stat.ap] 2 Aug 2015 Fakultät für Mathematik

More information

Individualized Treatment Effects with Censored Data via Nonparametric Accelerated Failure Time Models

Individualized Treatment Effects with Censored Data via Nonparametric Accelerated Failure Time Models Individualized Treatment Effects with Censored Data via Nonparametric Accelerated Failure Time Models Nicholas C. Henderson Thomas A. Louis Gary Rosner Ravi Varadhan Johns Hopkins University July 31, 2018

More information

JOINT STRATEGIC NEEDS ASSESSMENT (JSNA) Key findings from the Leicestershire JSNA and Charnwood summary

JOINT STRATEGIC NEEDS ASSESSMENT (JSNA) Key findings from the Leicestershire JSNA and Charnwood summary JOINT STRATEGIC NEEDS ASSESSMENT (JSNA) Key findings from the Leicestershire JSNA and Charnwood summary 1 What is a JSNA? Joint Strategic Needs Assessment (JSNA) identifies the big picture in terms of

More information

Subgroup analysis using regression modeling multiple regression. Aeilko H Zwinderman

Subgroup analysis using regression modeling multiple regression. Aeilko H Zwinderman Subgroup analysis using regression modeling multiple regression Aeilko H Zwinderman who has unusual large response? Is such occurrence associated with subgroups of patients? such question is hypothesis-generating:

More information