Alleles held at equilibrium by balancing selection
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1
2 Alleles held at equilibrium by balancing selection
3 Alleles held at equilibrium by balancing selection Neutral mutation
4 Alleles held at equilibrium by balancing selection Lost by drift Neutral mutation
5 Alleles held at equilibrium by balancing selection Lost by drift Neutral mutation Increased by drift
6 Alleles held at equilibrium by balancing selection
7 Alleles held at equilibrium by balancing selection
8 Alleles held at equilibrium by balancing selection
9 Alleles held at equilibrium by balancing selection
10 Alleles held at equilibrium by balancing selection
11 Alleles held at equilibrium by balancing selection
12 Minority neutral variants Favorable mutation
13 selection Minority neutral variants Favorable mutation
14 TgrB polymorphic positions (n=30) N sig seq Ig-1 Ig-2 Ig-3 TM C TgrC polymorphic positions (n=29) N sig seq Ig-1 Ig-2 Ig-3 Ig-4 Ig-5 Ig-6 TM C Benabentos et al., 2009 Current Biol. 19(7): Immunoglobulin-like domain
15 TgrD polymorphic positions out of 15 wild strains TgrE polymorphic positions out of 6 wild strains Benabentos et al., 2009 Current Biol. 19(7):
16 r = P < tgrb1 and tgrc1 are nearly identical to AX4 Genetic distance from AX4 Microsatellite-based Ostrowski et al. PLoS Biology 2008
17 12h 17h tgrc1 - tgrb1 - Ax4 qrt-pcr profile in Ax4 0.5mm
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20 Kin recognition suggests that cheating was important Prediction: If ability to cheat is a part of evolved fitness, then that ability should decline when selection is removed and drift increased.
21 Sara Fox
22 MA
23 Control lines do compete evenly against ancestor control line Ancestor-gfp Percent change of evolved lines compared to ancestor
24 Mutation accumulation lines highly variable; tend to lose against ancestor MA line Ancestor-gfp Percent change of evolved lines compared to ancestor
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27 Sequence another species for comparison Schaap et al Science
28 Xiangjun Tian
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30 Kuzdzal-Fick, Fox, Strassmann & Queller, Science 334:1548
31 Select for success of new natural cheater mutants under low relatedness Kuzdzal-Fick
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38 Cooperation is often treated as a topic apart, but it is basic to the evolution of life
39 In the major transitions in evolution, conflict must be resolved for formerly independent units to become selected together John Maynard Smith, Eörs Sathmáry Chromosome Prokaryote Cell Eukaryote Cell Multicellular Organism Colonial Superorganism
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42 High cooperation among parts, Low actual conflict among parts Consolidation of adaptations making the organism a unit of near unanimous design Queller & Strassmann Phil. Trans. R. Soc.,Strassmann & Queller Evolution
43 1. What are the possible fitness benefits to grouping?
44 1. What are the possible fitness benefits to grouping?
45 1 a. Rise above the hazards of the soil, dispersal is facilitated
46 1b. Larger groups move farther Distance travelled (cm) Slug size (total volume of spores producted mm 3 ) Spearman rank correlation, p<0.001 Foster et al. Proc Royal Soc. B, 2002
47 Dicty slugs Bacteria slurry
48 1d. Exploit other cells to make better spores
49 2a. Exploitation by some clones avoiding the sterile, altruist role of stalk For 12 mixtures, we genotyped the head and tail of 7 individual slugs from each plate (Strassmann et al. Nature, 2000)
50 Within 2-clone chimeras, in 6/12 mixes one contributes more to spore than to stalk clone 1 clone 2 NC60.1 NC105.1 NC28.1 NC63.2 NC98.1 NC101.1 NC94.2 NC85.1 NC75.2 NC4 NC34.1 NC85.2 T T The image The image cannot be displayed. Your computer The image cannot be T Proportion of clone 1 NC60.2 NC34.1 NC28.2 NC69.1 NC70.1 NC99.1 NC94.1 NC85.2 NC28.1 NC47.2 NC34.2 NC39.1 % clone 1 % clone 2 Spores : top bar Stalk : bottom bar Neutral Prediction: Strassmann, Zhu, and Queller, Nature, 2000
51 Within 2-clone chimeras, in 6/12 mixes one contributes more to spore than to stalk clone 1 clone 2 NC60.1 NC105.1 NC28.1 NC63.2 NC98.1 NC101.1 NC94.2 NC85.1 NC75.2 NC4 NC34.1 NC85.2 T T The image The image cannot be displayed. Your computer The image cannot be T Proportion of clone 1 NC60.2 NC34.1 NC28.2 NC69.1 NC70.1 NC99.1 NC94.1 NC85.2 NC28.1 NC47.2 NC34.2 NC39.1 % clone 1 % clone 2 Spores : top bar Stalk : bottom bar Neutral Prediction: Strassmann, Zhu, and Queller, Nature, 2000
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53 2b. Cells that have starved 4 hours are more likely to become spores Random Stalk * Spores Kudzdal-Fick et al. Biology Letters 2010 *Fisher s PLSD p<0.05
54 Huang et al. 1997
55 2c. Do chimeras move as far as pure clones?
56 5 Chimaeric slugs move less far Mean distance migrated (cm) different single clones 10 different clone pairs 1 mix of five clones (5 reps) 1 mix of ten clones (5 reps) N=30, ANOVA, p< Number of clones in slug Foster et al., 2002
57 2c. Chimeras move less far than pure clones, for a given number of cells Kevin Foster Angelo Fortunato Foster et al., Royal Society Proceedings B, 2002
58 There are benefits and costs to grouping, making this an excellent system for studying sociality
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61 Transect location Number isolates clones
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63 r = P < Genetic distance from AX4 Microsatellite-based Ostrowski et al. PLoS Biology 2008
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66 5. How common are genes involved in cheating?
67 Great molecular biology collaborators Adam Kuspa Gadi Shaulsky
68 Do a selection on a pool of insertion mutants.
69 Does the interaction affect life history traits? Non-farmer Farmer Fb s: Fb s: Bacteria 3 mm 5 days of development Farmer clones enter the social stage before all food is exhausted
70 Dicty gene DpnII BamHI linearize plasmid and insert into random spot in Dicty Blasticidin Bs R pbsr Kb REMI knockouts Amp R Ampicillin
71 Selection to find cheater mutations 10,000 REMI generated mutants 1 round SM plate SM plate
72 Select for cheaters that get into spores instead of stalk Generation 1 Generation 20
73 Test for cheating mix 1:1 with wildtype AX4, labeled with green flourescent protein Selected population AX4 GFP
74 Santorelli et al. Nature, 2008
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76 Dictyostelium discoideum as a social organism 1. Benefits to grouping 2. Costs to grouping 3. Relatedness and kin discrimination 4. Experimental evolution: Impact of low relatedness 5. Genes involved in cheating are common and show rapid evolution.
77 In the lab, on agar and on soil, clones mix readily.
78 1) Is the farming trait stable? Bacteria Dictyostelium discoideum
79 Farmers regain their association with bacteria after curing with antibiotics; non-farmers do not acquire an association 100 % Reassociation Farmers Non-farmers 10 random sori; 4 farmers and 4 non-farmers; F 1,6 =48.864, p<0.001
80 2a) What proportion of clones are farmers? 100 % occurrence /14 3/9 1/3 4/9 Non-farmer Farmer Average proportion of farmers 35.5% 0 Virginia Minnesota Farmers and partners isolated from 4 independent collections of soil samples
81 QS8 QS21 QS14 QS11 QS18 QS22 QS15 QS9 QS23 disc NW QS4 QS1 QS12 QS6 QS17 citr DQ340385
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