NMR spectroscopy. Matti Hotokka Physical Chemistry Åbo Akademi University
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1 NMR spectroscopy Matti Hotokka Physical Chemistry Åbo Akademi University
2 Angular momentum Quantum numbers L and m (general case) The vector precesses
3 Nuclear spin The quantum numbers are I and m Quantum number I =, ½,, 3/,,... The most important nuclei Proton, H, I = ½ Carbon-3, 3 C, I = ½ Value of angular momentum, z component I m z
4 Rule of thumb Atomic number Z Atomic mass A Spin quantum number I Even Even Zero Even or odd Odd Half integer, ½, 3/, 5/,... Odd Even Integer,,, 3,...
5 Hydrogen Frequency MHz Spin I Abundance % H / H 3 H /.5-4
6 Periodic table 7 Li / 93 9 e 4. 3/ 3. 3/ C 5. /. 4 N O 3.6 5/.37 9 F 94. / Ne 7.8 3/.6 3 Na 6.5 3/ 5 Mg 6. 5/. 7 Al 6. 5/ 9 Si 9.9 / P 4.5 / 33 S 7.7 3/.8 35 Cl 9.8 3/ Ar 39 K 4.7 3/ Ca 6.7 7/.4 45 Sc 4.3 7/ 47 Ti 5.6 5/ V 6.3 7/ Cr 5.7 3/ Mn 4.7 5/ 57 Fe 3. /. 59 Co 3.7 7/ 6 Ni 8.9 3/. 63 Cu 6.5 3/ Zn 6.3 5/ Ga 4. 3/ Ge 3.5 9/ As 7. 3/ 77 Se 9. / r 5. 3/ Kr 3.8 9/.6 85 Rb 9.7 5/ 7 87 Sr 4.3 9/ Y 4.9 / 9 Zr 9.3 5/. 93 Nb 4.5 9/ 95 Mo 6.5 5/ Tc Ru 5. 5/ 7. 3 Rh 3. / 5 Pd 4.6 5/. 7 Ag 4. / 5.8 Cd. /.8 5 In.9 9/ Sn 37.3 / 8.6 Sb 3.9 5/ Te 3.6 / 7. 7 I. 5/ 9 Xe 7.7 / Cs 3. 7/ 37 a. 3/.3 38 La Hf 4. 7/ Ta. 7/ W 4. / Re.5 5/ Os 7.8 3/ Ir.9 3/ Pt.5 / Au.7 3/ 99 Hg 9.9 / Tl 57.8 / Pb.9 /.6 9 i 6. 9/ 9 Po At Rn
7 Magnetic moment For every nuclear spin angular momentum there is a related magnetic moment Its magnitude can be written in two ways I Component along the z-axis m z gn I N /
8 Constants for common nmr nuclei
9 Energy levels The Zeemann effect gives an energy in a magnetic field E The magnetic moment and thus the energy is quantitized E z m Selection rule m=± E m
10 Transition energy Proton, I=/, external field =.49 T E( ) ( J 8 HzT ) J Hz (.49T ) E( ) J E E( 6 ) E( ) J 6. MHz
11 A spin ½ particle E E -/ E E +/
12 A spin particle N.. Spin ½ particles are assumed if not otherwise stated E m=- E - E E E m= E + m=+
13 One nucleus z The x- and y-components of the magnetic moment are blotted out because the vector precesses.
14 Several nuclei
15 Populations g E N N m kt g N N e N N / x e x kt g N N N N N A N N N kt g N N N N A kt g N N N N A kt g N N N n N N A Proton,.49 T, 3 K => n/n A = -5
16 Larmor frequency A nucleus without electrons (fictious case) The nucleus feels the field Transition energy E Larmor The nucleus is actually shielded It feels a lower field
17 Chemical shift The electron cloud shields the nucleus The nucleus feels a lower field ( ) Transition energy E Obs Displacement from Larmor frequency E E Chemical shift Larmor Obs E Larmor
18 Practical scale E Ref Ref E Obs E Larmor Obs ( 6 Ref Obs) [Hz] The more electrons the better shielding and lower.
19 Practical scale N.. Fictious spectrum, no coupling Ar-H CH CH CH 3 TMS [ppm]
20 Practical scale Negative shielding No shielding Positive shielding Downfield, negative σ Paramagnetic shielding [T] Upfield, positive σ Diamagnetic shielding
21 Practical scale The scale is δ [ppm] for all nuclei C 6 H 6 CHCl 3 H C H 4 OC(CH 3 ) C H 6 TMS ML 5 H to -3 3 C CS OC(Me)OH C 6 H 6 CHCl 3 OC(CH 3 ) TMS N NO - CH 3 NO RSCN RNC NH
22 Classical theory Definitions r
23 Classical theory oth the nuclei and the electrons precess under an external field. Precession frequency of electrons in their orbit e mec Electrons moving in their orbit create a current I e e 4m c e
24 Classical theory Current gives rise to a magnetic field This field has the mgnitude ' I sin cr e sin m rc It lies opposite to the external field The total field felt by the nucleus is the external field minus the field generated by the electrons. ' e
25 Classical theory The total field is obtained by integrating Assume a spherical charge distribution (r) ) ( 3 4 ) ( )sin (cos 3 ' r rdr m c e r rdr d m c e e e ) ( 3 4 dr r r m c e e
26 Ramsey s theory Consider a free molecule in space No field, Hamiltonian H The unperturbed Shrödinger equation H k E k where k = is ground state, k > electronically excited state k
27 Ramsey s theory Perturbation is the magnetic field The perturbed Hamiltonian z z y y x x M M M H H Pert xyz xyz z z y y x x H chemistry! polarization diamagnetic frequency Larmor induced dipole gives dipole permanent Pert H M
28 Ramsey s theory Solve using perturbation theory Zeroth order First order Second order E E E E E Pert H E E E E E m m Pert m m Pert E E H H E
29 Ramsey s theory Chemical shift asic equation Interaction energy Diamagnetic and paramagnetic term E E E p d E E
30 Ramsey s theory In a detailed treatment σ is a tensor Explicit expression for perturbation gives for nucleus A 3 8 N el i ia ia i ia i e d r r r r r m e m m m N i i N i ia ia m m N i ia ia m m N i i e p E E L r L E E r L L m e el el el el
31 Chemical shifts Example: benzene Current I Induced Paramagnetic Diamagnetic
32 Coupling Consider the field felt by nucleus X Extra electrons A Extra electrons X
33 Coupling E Energy levels of nucleus X Nucleus A is Nucleus A is Nucleus A is Nucleus A is Without field With field With coupling
34 Coupling scheme Chemical shift Coupling TMS J [ppm] The coupling constant J is given in Hz
35 Coupling patterns Two spin ½ nuclei, e.g., protons J
36 Coupling patterns Two spin nuclei, e.g., deuterium J J J J -,- -, -,+ +, +,+,-,,+ +,-
37 Satellites Different elements do not interact. However Deuterium of heavy water solvent may contaminate the sample, e.g., acetone J(HD)=.4 Hz H 3 C-C(O)-CH 3 D HC-C(O)-CD 3 (oth H spectra!)
38 Spin vectors A quantum mechanical description of the nuclear spin
39 Angular momentum operator The operator for a general angular momentum Pauli spinors Ŝ z y x S i i S S
40 Square of S i i S S S S z y x
41 Eigenvalues z z S S S S
42 Two particles Wavefunction Note the order 3 4 () () () () () () () ()
43 Hamiltonian The Hamilton operator for high-resolution nmr is Note: the nuclear angular momentum is denoted by I, H H I I J I g H N i j j i j i ij N i zi i N i
44 Matrix elements Two spin ½ nuclei zero. are The rest I I I I I I I I I I I I
45 How to calculate () () () () 4 3 k ij i k ij i k j i i i k j i i i I I I I () () () () () () () () z z z z I I I I
46 Hamilton matrix J J J J J J L L L L
47 Solutions L L L J C J E C J E C J E J E ' i i i i i c c c c 4 3 c Q Q Q c Q Q Q c c J Q L C
48 Intensities The intensity is ' ' i j i j I P ) /( ) ( ) /( ) ( ) /( ) ( ) /( ) ( Q Q P Q Q P Q Q P Q Q P
49 Example 4 J AX 3 J 4 C J Midpoint 3 A J C ε Midpoint ε
50 Classification of spectra AX AM A δ δ δ
51 Classification of spectra A A spectrum schematically A J J J
52 Classification of spectra A A spectrum schematically A J J J ββα βαβ αββ βαα βββ αβα ααβ ααα
53 Klassificering av spektra Ett AMX spektrum schematiskt X M A J AX J AM J AX J MX J MX J MX J MX J AM J AM
54 Relaxation Excess of α spins Macroscopic magnetic moment Relaxation M n Ng N kt Equilibrium excess is n magnetic moment M Excess in a disturbed system n and M N Ng N N kt N N dn dt n n dm dt M M
55 Perturbations Longitudinal The magnetization M z is affected Alters the ratio of α and β nuclei Energy is absorbed Transversal The magnetizations Mx and My are affected The number of α and β nuclei unchanged Precession phase is affected Energy is not absorbed
56 Relaxation times After longitudinal perturbation Longitudinal or spin-lattice relaxation time τ After a transversal perturbation Transversal or phase coherence relaxation time τ The relaxation times are seconds or even minutes The relaxation times are additive m m i i i i
57 Longitudinal perturbation
58 Transversal perturbation
59 Relaxation mechanisms A few of the factors that cause relaxation Inhomogeneties in the field rownian motion Dipol-dipol interactions The electric quadrupole moment Spin-rotation interactions Anisotropy of the coupling tensor J
60 rownian motions Local inhomogeneties in magnetic field There is a characteristic correlation time τ C All local oscillation frequencies from to / τ C are present The perturbing fieldstrength is K( C ) Here ν C is the frequency of the perturbation Time τ C is typically - s From Debye s theory C C C 4a 3k C 3 T
61 Dipole-dipole interaction Affects both τ and τ C C C C DD r K C C C C C DD r K
62 Electric quadrupole interaction I 3 Q d V C I dz Q Q I
63 loch s equations asis for all relaxation treatments Macroscopic magnetic moment Total external field 3 M i i cos( t)î sin( t)ĵ k Here is the intense static field and is the radio frequency at ν
64 loch s equations Relaxation after a perturbation dm z dt dm x dt dmy dt M M M z x y M
65 loch s equations Equation of motion dm dt M î M x cos( t) ĵ M y sin( t) k M z
66 loch s equations loch s equations From these M x, M y and M z can be solved ) sin( ) sin( ) cos( ) sin( M t M M dt dm t M M M dt dm t M t M M M dt dm x z y y z y x x y x z z
67 loch s equations Magnetic susceptibility χ Value in the xy plane depends on the radio signal Value in z direction, χ, is uninteresting because the field is static Susceptibility defined via M
68 loch s equations Consider only susceptibility in xy plane The x and y are usually given as a complex number Assuming a non-saturated system ' " i L L L ) "( ) '(
69 Absorption Susceptibility Χ gives dispersion Χ gives absorption χ τ Δν χ
70 Absorption Assuming a radio field in x direction, x Absorbed energy sin( t) Absorbed effect P E M x x de dt ( ) At resonance χ may be much larger than χ " L
71 Macroscopic sample Only an extremely small net magnetisation M z is observed. The radio pulse affects all nuclei and therefore the macroscopic magnetisation M z will also behave in the same way. Only the macroscopic magnetisation can be observed.
72 Pulse types
73 Normal FT-NMR spectrum Accumulate Accumulate Accumulate
74 ATP pulse sequence Attached Proton Test Run 3 C FT-NMR spectrum H decoupling Decoupling off 3 C
75 ATP pulse sequence Up: Normal proton decoupled spectrum. Middle: = /J, only signals from the quaternary carbons will show. Down: = /J, even/odd separation. Lines pointing up refer to CH carbons, lines pointing down refer to CH and CH 3 groups Jokisaari, Lecture notes, Oulu
76 INEPT Insensitive Nuclei Enhanced by Polarization Transfer Transfer intensity from the strong absorbers (e.g., H) to unsensitive nuclei (e.g., 3 C, 4 N, 9 Si).
77 INEPT (9 o ) x 8 o (9 o ) y H: X 3 C: A Prepare transfer
78 Spin-echo experiment Pulse sequence 9 8 Wait time t Wait time t Read the spin echo
79 Spin-echo experiment y y b a x a x Sväng. Alla spinn precesserar koherent i xy planet. b Vänta. Kärnorna förlorar koherens. Sväng 8. Kärnorna återförs till koherens.
80 Spinnekoexperiment
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