SUPPLEMENTARY INFORMATION

Size: px
Start display at page:

Download "SUPPLEMENTARY INFORMATION"

Transcription

1 DOI: /NCHEM.1677 Entangled quantum electronic wavefunctions of the Mn 4 CaO 5 cluster in photosystem II Yuki Kurashige 1 *, Garnet Kin-Lic Chan 2, Takeshi Yanai 1 1 Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, National Institutes of Natural Sciences, Okazaki, Aichi , Japan. 2 Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA *Correspondence to: kura@ims.ac.jp Index Section S1. Guide for reading the population diagrams 2 Section S2. Natural orbitals and occupation numbers 2 Section S3. Spin density and spin projections for the S 2 -state 3 Section S4. Interpretation of the pairwise entanglement and assignment of bond character 4 Section S5. Guide for reading the entanglement map 6 Section S6. Entanglement analysis for the XRD and QM/MM structures 7 Section S7. Bond configurational analysis for the XRD structure 7 Figure S1. Mapping of the localized molecular orbitals to the DMRG lattice 11 Figure S2. Population diagrams of the [XRD+H] + model 12 Figure S3. Diagram of the pair-wise orbital entanglement for the S 1 -state 13 Tables S1 S9. Natural orbitals and occupation numbers 14 Table S10. Bonding character of Mn-O 23 Tables S11 S12. Cartesian coordinates of the XRD and XRD+H models 24 Tables S13 S14. Pairwise orbital entanglement matrix 28 NATURE CHEMISTRY 1

2 Supporting information: Section S1: Population diagrams (Fig. 1a d). Figure 1a shows that the oxidation state of Mn1 is Mn III, with four singly-occupied 3d orbitals (three Mn1 t 2g orbitals and one Mn1 e g orbital). The other Mn1 e g orbital is almost unoccupied (0.08 electrons). It is covalently coupled to an O3 2p orbital leading to σ bonding and σ * antibonding Mn1-O3 orbitals. In Fig. 1b, Mn2 is assigned the intermediate oxidation state Mn (III )IV, in the sense that all three Mn2 t 2g orbitals are singly occupied and the two Mn2 e g orbitals, which point towards O1,3 and O2,3, respectively, are occupied by 0.37 and 0.22 electrons, respectively. The interaction of these two Mn2 e g orbitals with the ligand O 2p orbitals creates two sets of σ and σ * orbitals between Mn2 and O1 3. We assign the oxidation state of Mn3 as Mn (II )III (Fig. 1c). All three Mn3 t 2g orbitals are singly occupied and the occupation of the two Mn3 e g orbitals pointing to O5 and O2, respectively, are 0.73 electrons and 0.34 electrons, respectively. The two Mn3 e g orbitals, interacting with the coordinated O2 and O5 2p orbitals, respectively, each contribute to forming σ and σ * orbitals (Mn3-O2 and Mn3-O5). Figure 1d indicates that Mn4 is in oxidation state Mn II. All five Mn4 3d are singly occupied orbitals. One of the Mn4 e g orbitals mixes with the O4 2p orbitals perpendicular to Mn4-O4-Mn3 plane, giving rise to π and π * Mn4- O4 orbitals. Section S2: Natural orbitals and occupation numbers. The spinless one-electron reduced density matrix was computed from the DMRG wavefunction during the one-site sweeping procedure and was then diagonalized to obtain natural orbitals and NATURE CHEMISTRY 2

3 associated occupation numbers as eigenfunctions and eigenvalues, respectively. The deviation in occupancy from integer values (0, 1, or 2) reflects the strength of electron correlation. In addition to the schematic energy level diagrams of natural orbitals [Fig. 1 ([XRD]), Fig. S2 ([XRD+H] + ), and Fig. 3 (QM/MM)], Tables S1 S5 list the occupation numbers, orbital energies, and bonding character for several models of the OEC; XRD, [XRD+H] +, [XRD] 2-, [XRD+H] 2-, and QM/MM, respectively. We studied these models so as to be able to assign the cluster state of our OEC model. We found that in the S 1 state, some of the O 2p orbitals in the XRD and [XRD+H] + models were not doubly occupied. If we assume that the O 2p orbitals should be doubly occupied at these geometries, this requires us to modify the total cluster charge, and the XRD and [XRD+H] + models then appear to be reduced by two and three electrons (such reduced models correspond to [XRD] 2- and [XRD+H] 2- ). This further supports the hypothesis that at the XRD geometry the cluster is not in the S 1 state. Conversely, if we examine the cluster at the QM/MM geometry, all oxygen 2p orbitals are doubly occupied, confirming that this is the likely candidate structure for the S 1 state. Section S3: Spin density and spin projections for the S 2 -state. The DMRG-CASSCF calculations were performed at several candidate S 2 structures that are different in the protonation states of the waters (W1 and W2) that are ligated to Mn4. These are denoted the W1:H 2 O, W2:H 2 O, W1:OH, W2:H 2 O, W1:H 2 O, W2: OH, and W1: OH, W2: OH model structures. These structures have been proposed earlier in several DFT studies 30,34. The first three structures were proposed in Ref [30] (where they were called models 1, 1d1, and 1d2 ), and the latter structure was proposed in Ref[34]. For the first three structures, we simplified the amino-acid residues to a carboxylate or an imidazole ring (Tables S6 S9). The NATURE CHEMISTRY 3

4 def2-tzvpp basis sets for Mn, Ca, O, and N atoms and def2-svp basis sets for C and H atoms were used. 47,51-52 Scalar relativistic effects were included using the Douglas-Kroll-Hess (DKH) Hamiltonian. 53,54 Table 1 shows the spin projections of the DMRG-CASSCF wavefunctions for the S 2 -state (S=1/2, M s =1/2). The spin projections for the each atom were determined by the Mulliken spin population analysis. We also show for comparison the spin projections obtained in Ref[30] by using the 4-site, i.e. Mn1 4, Heisenberg spin model, for which the exchange parameters J were determined by fitting the broken symmetry (BS) DFT energies. Section S4: Interpretation of the pairwise entanglement and assignment of bond character The pairwise orbital entanglement (mutual orbital information) I pq, based on the von Neumann entropy, is a well-known concept in quantum information theory that is used to quantify the entanglement between two (possibly disconnected) regions. This quantity has recently been studied in chemical systems (J. Rissler, R. M. Noack, and S. White, Chem. Phys. 323, 519 (2006); K. Boguslawski, K. H. Marti, O. Legeza, and M. Reiher, J. Chem. Theory Comput. 8, 1970 (2012), K. Boguslawski, P. Tecmer, O. Legeza, and M. Reiher, J. Phys. Chem. Lett. 3, 3129 (2012)). The pairwise orbital entanglement measures the effective number of entangled degrees of freedom between the two orbitals. Some insight into this quantity can be obtained by considering a minimal 2-center 2-electron bond, with atomic orbitals! and!. The maximum value log 4 = 1.39 between two orbitals is achieved in the delocalized covalent molecular orbital type wavefunction! =! 1 +! 1! 2 +! 2 [!!!!!!!! ]. [ MO (covalent-bond) type ] NATURE CHEMISTRY 4

5 (I pq = log(4) = 1.39 ) The diradical singlet, valence-bond like wavefunction! = [! 1! 2 +! 1! 2 ][!!!!!!!! ] [ VB (valence-bond) type ] ( I pq = log(2) = 0.69 ) yields a pairwise entanglement of log 2 = The wavefunction of an ionic or coordinationbond character! = [! 1! 2 ][!!!!!!!! ] [ionic or coordination-bond type] ( I pq = log(1) = 0 ) yields a pairwise entanglement of log 1 = 0. From the above rigorous argument, when using the localized orbital representation, the magnitude of the orbital entanglement I pq characterizes the bonding type. The full set of pairwise entanglements is given in Tables S13 and S14. Note that the values are smaller than associated with the 2-center 2-electron bonds above, because of the property of entanglement monogamy: if A is entangled with B, that limits the amount of entanglement between B and C. Effectively, the entanglement becomes distributed across the different bonds. Nonetheless, the distinction between different kinds of bonds can still be seen. NATURE CHEMISTRY 5

6 The orbital labels refer to the localized orbitals shown in Fig. S1. The entanglement analysis (and indeed any correlation function analysis) depends on the choice of orbitals. We have chosen localized orbitals for our analysis, rather than a delocalized orbital basis (such as the natural orbital basis), because the localized orbitals allows us to identify individual bonds between atoms, rather than delocalized bonds between multiple Mn centers. This is probably the appropriate basis to study a strongly correlated system of localized spins, of which the Mn centers in the OEC are a prime example. Section S5: Guide for reading the entanglement map The diagrams shown in Fig. 5 provide a network-analysis-oriented way of visualizing a matrix I pq. The values of I pq are shown in Tables S13 and S14. As written in the Main text, they represent the strength of the two orbital pair-wise entanglements, computed from reduced density matrices of the high-dimensional DMRG wave function. 1. The diagram shows quantum entanglements of 35 nodes (these look like blobs ). For example, the five nodes labeled Mn1 correspond to the five localized d-type orbitals of the atom Mn1, which are all employed as active space orbitals. The three nodes labeled O1 correspond to the three p-type active-space orbitals of the atom O1. Each single node represents an atomic-like orbital. (It does not directly correspond to the atom itself.) The shapes of the 35 orbitals corresponding to all the nodes are plotted in Fig. S1. 2. The diagrams are drawn using the network exploration and visualization software Gephi [M. Bastian, S. Heymann, and M. Jacomy, International AAAI Conference on Weblogs and NATURE CHEMISTRY 6

7 Social Media, 2009; The thickness of the lines between nodes p and q is proportional to the mutual information matrix element I pq. 3. The placement of the nodes in the diagram of Fig. 5 was determined using the forcedirected layout algorithm Force Atlas implemented in Gephi. 4. The layout algorithm forms clusters when each node has a high connectivity (i.e. many elements of I pq emanating from that node are significant). The cluster of Mn orbitals on each atom are closely connected, as shown in Fig. 5. This arises from quantum spin fluctuations on each Mn atom that are neglected in the usual spin models used to interpret the magnetism. 5. Several of the Mn-O orbitals display rather thick lines and this illustrates significant bonding. Medium lines indicates singlet diradical bonding. The changes in these lines as a function of the Kok cycle is described in the Main Text. Section S6: Entanglement analysis for the XRD and QM/MM structures (the S 1 state) The calculation of the pairwise orbital entanglement (mutual information) matrix I pq in the localized orbital representation was also performed on the XRD and QM/MM structures for the S 1 state. The corresponding entanglement map is shown in Fig. S3. As we can see the map is quite sensitive to the change in moving from the XRD structure to the refined S1 structure of the QM/MM calculation, illustrating the changes in the bonding of the Mn3, Mn4, and O5 atoms. Section S7: Bond configurational analysis for the XRD structure (the S 1 state) The configurational characters of the bonds in Table S10 are computed from the one- and twoparticle density matrix for the S 1 XRD structure. The table displays the bond character of the six NATURE CHEMISTRY 7

8 pairs of bonding σ (and π) and anti-bonding σ * (and π * ) orbitals formed between the Mn 3d and O 2p orbitals. The occupancy of each of the orbital pairs is decomposed into spin configurations with a ratio. For example, for a given bonding orbital! we can define a corresponding creation and annihilation operator!!,! respectively. Then the (unnormalized) weight of the bonding orbital configuration corresponds to the two-particle density matrix element!!!!!!. Similarly, creation and annihilation operators can be defined for the anti-bonding orbital and thus the relative weights of all the (two-electron) configurations shown in Table S10 can be found. Note that the natural orbitals are employed for defining the bonding and anti-bonding orbitals,! and!, respectively. The relative weights of the non-two-electron configurations can be determined from the sum of one-particle density!! +!! by assuming that there are more than two electrons in the all configurations. Overall, the main weight is from anti-parallel spin configurations, such as doubly-occupied σ (and σ*) and the excited configuration where σ and σ* are singly-occupied. The former is the standard closed-shell bond, while the latter mixes in if the bond is stretched. Overall, these might be viewed as normal singlet bonding configurations. However, a relatively large weight is observed also in parallel spin configurations ( or ) with two electrons occupying σ and σ*, respectively, e.g. a ratio of 25% for π/π* Mn4 O4. This admixture of anti-parallel and parallel spins, is a many-electron correlation effect. The large weight of the parallel spin component seems to arise from the nontrivial interaction with the other electron-rich Mn orbital sites, which donate the same spin. This spin transfer is not a simple charge transfer in a one-particle picture (since the densities of the Mn atoms are not affected) but can be attributed to many-body (quantum or multi-configurational) effects. These spin interactions cannot be described by NATURE CHEMISTRY 8

9 generalized valence bond theory, and require a more highly entangled wave function treatment as we have carried out. NATURE CHEMISTRY 9

10 References 51. D. A. Pantazis, X.-Y. Chen, C. R. Landis, F. Neese, All-electron scalar relativistic basis sets for third-row transition metal atoms, J Chem Theory Comput 4, (2008). 52. F. Weigend, Hartree Fock exchange fitting basis sets for H to Rn, J Comput Chem 29, (2007). 53. G. Jansen, B. A. Hess, Revision of the Douglas-Kroll transformation, Phys. Rev. A 39, (1989). 54. B. Hess, Relativistic electronic-structure calculations employing a two-component no-pair formalism with external-field projection operators, Phys. Rev. A 33, (1986). NATURE CHEMISTRY 10

11 Fig. S1. Mapping of the localized molecular orbitals to the 1D lattice of the DMRG algorithm. These orbitals are obtained by the DMRG-CASSCF procedure. In these plots, the amino ligands and waters are omitted for clarity. NATURE CHEMISTRY 11

12 Fig. S2. Orbital energy levels and electron occupancies of the four Mn sites for [XRD+H] + model: (a) Mn1, (b) Mn2, (c) Mn3, (d) Mn4. The labeling follows Fig. 1 (XRD model). NATURE CHEMISTRY 12

13 DOI: /NCHEM.1677 Fig. S3. Diagram of the pair-wise orbital entanglement of the XRD structure (left) and QM/MM refined structure (right) for the S1 state NATURE CHEMISTRY

14 Table S1. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the XRD model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn1-O σ Mn2-O2, σ Mn3-O σ Mn2-O1, σ Mn3-O π Mn4-O Mn1 4 3d π * Mn4-O σ * Mn3-O σ * Mn2-O1, σ * Mn3-O σ * Mn2-O2, σ * Mn1-O3 NATURE CHEMISTRY 14

15 Table S2. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the [XRD+H] + model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn1-O σ Mn3-O σ Mn2-O σ Mn2-O π Mn3-O π Mn4-O Mn1 4 3d π * Mn4-O π * Mn3-O σ * Mn2-O σ * Mn2-O σ * Mn3-O σ * Mn1-O3 NATURE CHEMISTRY 15

16 Table S3. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the [XRD] 2- model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn1-O σ Mn2-O σ Mn3-O σ Mn3-O Mn1 4 3d σ * Mn3-O σ * Mn3-O σ * Mn2-O σ * Mn1-O1 NATURE CHEMISTRY 16

17 Table S4. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the [XRD+H] 2- model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn1-O σ Mn3-O σ Mn2-O Mn1 4 3d σ * Mn2-O σ * Mn3-O σ * Mn1-O3 NATURE CHEMISTRY 17

18 Table S5. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the QM/MM model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn3-O2, σ Mn2-O1, σ Mn3,4-O4, σ Mn1-O1, σ Mn2-O2, σ Mn3,4-O4, Mn1 4 3d σ * Mn3,4-O4, σ * Mn3,4-O4, σ * Mn2-O2, σ * Mn1-O1, σ * Mn2-O1, σ * Mn3-O2,4 NATURE CHEMISTRY 18

19 Table S6. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the Siegbahn s S 0 - state model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn4-O σ Mn3-O2, σ Mn2-O1, σ Mn1-O1, σ Mn4-O Mn1 4 3d σ * Mn4-O σ * Mn1-O1, σ * Mn2-O1, σ * Mn3-O2, σ * Mn4-O5 NATURE CHEMISTRY 19

20 Table S7. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for the Siegbahn s S 1 - state model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn4-O σ Mn2-O2, σ Mn3-O4, σ Mn3-O2, σ Mn1-O1, σ Mn4-O4, Mn1 4 3d σ * Mn4-O4, σ * Mn1,-O1, σ * Mn3-O2, σ * Mn3-O4, σ * Mn2-O2, σ * Mn4-O4 NATURE CHEMISTRY 20

21 Table S8. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for Siegbahn s S 2 -state model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn4-O σ Mn1-O1, σ Mn3-O2, σ Mn2-O1, σ Mn2-O1, σ Mn3-O4, σ Mn4-O4, Mn1 4 3d σ * Mn4-O4, σ * Mn3-O4, σ * Mn2-O1, σ * Mn2-O1, σ * Mn1-O1, σ * Mn3-O2, σ * Mn4-O5 NATURE CHEMISTRY 21

22 Table S9. Natural orbitals (NO) in the Mn 3d and µ-oxo 2p active space for Siegbahn s S 3 -state model. The electron occupations, energy levels, and characters are presented. The orbital energies (E h ) are given by the diagonal elements of the Fock matrix. NO occupation energy(e h ) character O1 5 2p σ Mn4-O σ Mn1-O σ Mn3-O2, σ Mn2-O1, σ Mn4-O4, σ Mn2-O2, σ Mn3-O4, σ Mn1-O1, Mn1 4 3d σ * Mn1-O1, σ * Mn3-O4, σ * Mn2-O2, σ * Mn4-O4, σ * Mn2-O1, σ * Mn3-O2, σ * Mn1-O σ * Mn4-O5 NATURE CHEMISTRY 22

23 Table S10. Bonding character of selected Mn-O σ and π bonds for the XRD structure (the S 1 state). Each bond is decomposed into normalized percentage weights of different local configurations, as computed from the two-particle density matrix in the natural orbital basis. bonding / antibonding orbitals a ratio of spin configurations on bonding and anti-bonding orbitals σ * (π * ) σ (π ) Mn1 O3(σ/σ * ) 90% 1% 4% 3% 2% Mn2 O1,3(σ/σ * ) 65% 8% 11% 13% 3% Mn2 O2,3(σ/σ * ) 76% 3% 9% 9% 2% Mn3 O5(σ/σ * ) 48% 20% 11% 21% 1% Mn3 O2(σ/σ * ) 70% 8% 9% 10% 2% Mn4 O4(π/π * ) 38% 24% 13% 25% 1% or or etc. NATURE CHEMISTRY 23

24 Table S11. Cartesian coordinates of the XRD model (Å) x y z Ca Mn Mn Mn Mn O O O O O C O O C O O C N C C N C O O C O O C O O C O O O H H O H H O H H O H H C H H H C H H NATURE CHEMISTRY 24

25 H C H H H C H H H C H H H H H H H C H H H O H H O H H NATURE CHEMISTRY 25

26 Table S12. Cartesian coordinates of the [XRD+H] + model (Å) x y Z Ca Mn Mn Mn Mn O O O O O H C O O C O O C N C C N C O O C O O C O O C O O O H H O H H O H H O H H C H H H C H NATURE CHEMISTRY 26

27 H H C H H H C H H H C H H H H H H H C H H H O H H O H H NATURE CHEMISTRY 27

28 Table S13. The pairwise orbital entanglement matrix Ipq of the DMRG-CASSCF(44e, 35o) many-electron wavefunction at the XRD structure (Fig.S3). ψ 1 ψ 2 ψ 3 ψ 4 ψ 5 ψ 6 ψ 7 ψ 8 ψ 9 ψ 10 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 28

29 ψ 11 ψ 12 ψ 13 ψ 14 ψ 15 ψ 16 ψ 17 ψ 18 ψ 19 ψ 20 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 29

30 ψ 21 ψ 22 ψ 23 ψ 24 ψ 25 ψ 26 ψ 27 ψ 28 ψ 29 ψ 30 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 30

31 ψ 31 ψ 32 ψ 33 ψ 34 ψ 35 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 31

32 Table S14. The pairwise orbital entanglement matrix Ipq of the DMRG-CASSCF(44e, 35o) many-electron wavefunction at the QM/MM structure (Fig.S3). ψ 1 ψ 2 ψ 3 ψ 4 ψ 5 ψ 6 ψ 7 ψ 8 ψ 9 ψ 10 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 32

33 ψ 11 ψ 12 ψ 13 ψ 14 ψ 15 ψ 16 ψ 17 ψ 18 ψ 19 ψ 20 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 33

34 ψ 21 ψ 22 ψ 23 ψ 24 ψ 25 ψ 26 ψ 27 ψ 28 ψ 29 ψ 30 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 34

35 ψ 31 ψ 32 ψ 33 ψ 34 ψ 35 ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ ψ NATURE CHEMISTRY 35

3: Many electrons. Orbital symmetries. l =2 1. m l

3: Many electrons. Orbital symmetries. l =2 1. m l 3: Many electrons Orbital symmetries Atomic orbitals are labelled according to the principal quantum number, n, and the orbital angular momentum quantum number, l. Electrons in a diatomic molecule experience

More information

Introduction to Heisenberg model. Javier Junquera

Introduction to Heisenberg model. Javier Junquera Introduction to Heisenberg model Javier Junquera Most important reference followed in this lecture Magnetism in Condensed Matter Physics Stephen Blundell Oxford Master Series in Condensed Matter Physics

More information

Determining Factors for the Accuracy of DMRG in Chemistry

Determining Factors for the Accuracy of DMRG in Chemistry Determining Factors for the Accuracy of DMRG in Chemistry Sebastian F. Keller and Markus Reiher* submitted to Chimia, 21.01.2014 *Correspondence: Prof. Dr. Markus Reiher ETH Zürich Laboratorium für Physikalische

More information

arxiv: v1 [cond-mat.str-el] 17 Aug 2016

arxiv: v1 [cond-mat.str-el] 17 Aug 2016 arxiv:1608.04901v1 [cond-mat.str-el] 17 Aug 2016 Evolutionary algorithm based configuration interaction approach Rahul Chakraborty 1 1, a) and Debashree Ghosh Physical and Materials Chemistry Division,

More information

Orbital entanglement in bond-formation processes

Orbital entanglement in bond-formation processes Orbital entanglement in bond-formation processes Katharina Boguslawski a, Pawel Tecmer a, Gergely Barcza b, Örs Legezab,1, and Markus Reiher a,2 arxiv:10.20v2 [physics.chem-ph] 11 May 201 a ETH Zurich,

More information

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2 The Delocalized Approach to Bonding: The localized models for bonding we have examined (Lewis and VBT) assume that all electrons are restricted to specific bonds between atoms or in lone pairs. In contrast,

More information

QUANTUM CHEMISTRY FOR TRANSITION METALS

QUANTUM CHEMISTRY FOR TRANSITION METALS QUANTUM CHEMISTRY FOR TRANSITION METALS Outline I Introduction II Correlation Static correlation effects MC methods DFT III Relativity Generalities From 4 to 1 components Effective core potential Outline

More information

Supporting Information

Supporting Information Supporting Information Computational Evidence of Inversion of 1 L a and 1 L b -Derived Excited States in Naphthalene Excimer Formation from ab Initio Multireference Theory with Large Active Space: DMRG-CASPT2

More information

Accurate ab Initio Spin Densities

Accurate ab Initio Spin Densities pubs.acs.org/jctc Accurate ab Initio Spin Densities Katharina Boguslawski, Konrad H. Marti, O rs Legeza, and Markus Reiher*, ETH Zurich, Laboratorium fu r Physikalische Chemie, Wolfgang-Pauli-Str. 10,

More information

Beyond the Hartree-Fock Approximation: Configuration Interaction

Beyond the Hartree-Fock Approximation: Configuration Interaction Beyond the Hartree-Fock Approximation: Configuration Interaction The Hartree-Fock (HF) method uses a single determinant (single electronic configuration) description of the electronic wavefunction. For

More information

Momentum-space and Hybrid Real- Momentum Space DMRG applied to the Hubbard Model

Momentum-space and Hybrid Real- Momentum Space DMRG applied to the Hubbard Model Momentum-space and Hybrid Real- Momentum Space DMRG applied to the Hubbard Model Örs Legeza Reinhard M. Noack Collaborators Georg Ehlers Jeno Sólyom Gergely Barcza Steven R. White Collaborators Georg Ehlers

More information

Entanglement in Many-Body Fermion Systems

Entanglement in Many-Body Fermion Systems Entanglement in Many-Body Fermion Systems Michelle Storms 1, 2 1 Department of Physics, University of California Davis, CA 95616, USA 2 Department of Physics and Astronomy, Ohio Wesleyan University, Delaware,

More information

Automated Selection of Active Orbital Spaces

Automated Selection of Active Orbital Spaces Automated Selection of Active Orbital Spaces Christopher J. Stein and Markus Reiher February 12, 2016 arxiv:1602.03835v1 [physics.chem-ph] 11 Feb 2016 ETH Zürich, Laboratory of Physical Chemistry, Vladimir-Prelog-Weg

More information

Luigi Paolasini

Luigi Paolasini Luigi Paolasini paolasini@esrf.fr LECTURE 4: MAGNETIC INTERACTIONS - Dipole vs exchange magnetic interactions. - Direct and indirect exchange interactions. - Anisotropic exchange interactions. - Interplay

More information

CHEM J-5 June 2014

CHEM J-5 June 2014 CHEM1101 2014-J-5 June 2014 The molecular orbital energy level diagrams for H 2, H 2 +, H 2 and O 2 are shown below. Fill in the valence electrons for each species in its ground state and label the types

More information

Calculation of excitation energies for heavy-element systems

Calculation of excitation energies for heavy-element systems Calculation of excitation energies for heavy-element systems Stefan Knecht ETH Zürich, Laboratorium für Physikalische Chemie, Switzerland http://www.reiher.ethz.ch/people/knechste stefan.knecht@phys.chem.ethz.ch

More information

Citation for published version (APA): Sadoc, A. G. J. (2008). Charge disproportionation in transition metal oxides s.n.

Citation for published version (APA): Sadoc, A. G. J. (2008). Charge disproportionation in transition metal oxides s.n. University of Groningen Charge disproportionation in transition metal oxides Sadoc, Aymeric Gaël Jocelyn IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish

More information

arxiv:quant-ph/ v5 10 Feb 2003

arxiv:quant-ph/ v5 10 Feb 2003 Quantum entanglement of identical particles Yu Shi Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA, United Kingdom and Theory of

More information

Lecture B6 Molecular Orbital Theory. Sometimes it's good to be alone.

Lecture B6 Molecular Orbital Theory. Sometimes it's good to be alone. Lecture B6 Molecular Orbital Theory Sometimes it's good to be alone. Covalent Bond Theories 1. VSEPR (valence shell electron pair repulsion model). A set of empirical rules for predicting a molecular geometry

More information

Quantum dissection of a covalent bond

Quantum dissection of a covalent bond Quantum dissection of a covalent bond Norm M. Tubman 1 and D. ChangMo Yang 1 1 University of Illinois at Urbana-Champaign, Urbana, Illinois, USA arxiv:1412.1495v1 [cond-mat.str-el] 3 Dec 2014 We propose

More information

Multiconfigurational Quantum Chemistry. Björn O. Roos as told by RL Department of Theoretical Chemistry Chemical Center Lund University Sweden

Multiconfigurational Quantum Chemistry. Björn O. Roos as told by RL Department of Theoretical Chemistry Chemical Center Lund University Sweden Multiconfigurational Quantum Chemistry Björn O. Roos as told by RL Department of Theoretical Chemistry Chemical Center Lund University Sweden April 20, 2009 1 The Slater determinant Using the spin-orbitals,

More information

Hints on Using the Orca Program

Hints on Using the Orca Program Computational Chemistry Workshops West Ridge Research Building-UAF Campus 9:00am-4:00pm, Room 009 Electronic Structure - July 19-21, 2016 Molecular Dynamics - July 26-28, 2016 Hints on Using the Orca Program

More information

Lecture 5. Hartree-Fock Theory. WS2010/11: Introduction to Nuclear and Particle Physics

Lecture 5. Hartree-Fock Theory. WS2010/11: Introduction to Nuclear and Particle Physics Lecture 5 Hartree-Fock Theory WS2010/11: Introduction to Nuclear and Particle Physics Particle-number representation: General formalism The simplest starting point for a many-body state is a system of

More information

Molecular Term Symbols

Molecular Term Symbols Molecular Term Symbols A molecular configuration is a specification of the occupied molecular orbitals in a molecule. For example, N : σ gσ uπ 4 uσ g A given configuration may have several different states

More information

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2

Be H. Delocalized Bonding. Localized Bonding. σ 2. σ 1. Two (sp-1s) Be-H σ bonds. The two σ bonding MO s in BeH 2. MO diagram for BeH 2 The Delocalized Approach to Bonding: The localized models for bonding we have examined (Lewis and VBT) assume that all electrons are restricted to specific bonds between atoms or in lone pairs. In contrast,

More information

Lecture 4: Hartree-Fock Theory

Lecture 4: Hartree-Fock Theory Lecture 4: Hartree-Fock Theory One determinant to rule them all, One determinant to find them, One determinant to bring them all and in the darkness bind them Second quantization rehearsal The formalism

More information

arxiv:quant-ph/ v2 24 Dec 2003

arxiv:quant-ph/ v2 24 Dec 2003 Quantum Entanglement in Heisenberg Antiferromagnets V. Subrahmanyam Department of Physics, Indian Institute of Technology, Kanpur, India. arxiv:quant-ph/0309004 v2 24 Dec 2003 Entanglement sharing among

More information

Density matrix renormalization group calculations on relative energies of transition metal complexes and clusters

Density matrix renormalization group calculations on relative energies of transition metal complexes and clusters THE JOURNAL OF CHEMICAL PHYSICS 128, 014104 2008 Density matrix renormalization group calculations on relative energies of transition metal complexes and clusters Konrad H. Marti, Irina Malkin Ondík, Gerrit

More information

Valence bond theory accounts, at least qualitatively, for the stability of the covalent bond in terms of overlapping atomic orbitals.

Valence bond theory accounts, at least qualitatively, for the stability of the covalent bond in terms of overlapping atomic orbitals. Molecular Orbital Theory Valence bond theory accounts, at least qualitatively, for the stability of the covalent bond in terms of overlapping atomic orbitals. Using the concept of hybridization, valence

More information

MO theory is better for spectroscopy (Exited State Properties; Ionization)

MO theory is better for spectroscopy (Exited State Properties; Ionization) CHEM 2060 Lecture 25: MO Theory L25-1 Molecular Orbital Theory (MO theory) VB theory treats bonds as electron pairs. o There is a real emphasis on this point (over-emphasis actually). VB theory is very

More information

Special 5: Wavefunction Analysis and Visualization

Special 5: Wavefunction Analysis and Visualization Special 5: Wavefunction Analysis and Visualization Felix Plasser Institute for Theoretical Chemistry, University of Vienna COLUMBUS in China Tianjin, October 10 14, 2016 F. Plasser Wavefunction Analysis

More information

Organic Chemistry Lecture I. Dr. John D. Spence

Organic Chemistry Lecture I. Dr. John D. Spence HEMISTRY 3 Organic hemistry Lecture I Dr. John D. Spence jdspence@scu.edu jspence@csus.eduedu http://www.csus.edu/indiv/s/spencej What is Organic hemistry? 780 s hemistry of compounds from living organisms

More information

Hartree, Hartree-Fock and post-hf methods

Hartree, Hartree-Fock and post-hf methods Hartree, Hartree-Fock and post-hf methods MSE697 fall 2015 Nicolas Onofrio School of Materials Engineering DLR 428 Purdue University nonofrio@purdue.edu 1 The curse of dimensionality Let s consider a multi

More information

Electronic structure of correlated electron systems. Lecture 2

Electronic structure of correlated electron systems. Lecture 2 Electronic structure of correlated electron systems Lecture 2 Band Structure approach vs atomic Band structure Delocalized Bloch states Fill up states with electrons starting from the lowest energy No

More information

Electronic communication through molecular bridges Supporting Information

Electronic communication through molecular bridges Supporting Information Electronic communication through molecular bridges Supporting Information Carmen Herrmann and Jan Elmisz Institute of Inorganic and Applied Chemistry, University of Hamburg, Martin-Luther-King-Platz 6,

More information

Supplemental Material for Giant exchange interaction in mixed lanthanides. Abstract

Supplemental Material for Giant exchange interaction in mixed lanthanides. Abstract Supplemental Material for Giant exchange interaction in mixed lanthanides Veacheslav Vieru, Naoya Iwahara, Liviu Ungur, and Liviu F. Chibotaru Theory of Nanomaterials Group, Katholieke Universiteit Leuven,

More information

Supplemental Material: Experimental and Theoretical Investigations of the Electronic Band Structure of Metal-Organic Framework of HKUST-1 Type

Supplemental Material: Experimental and Theoretical Investigations of the Electronic Band Structure of Metal-Organic Framework of HKUST-1 Type Supplemental Material: Experimental and Theoretical Investigations of the Electronic Band Structure of Metal-Organic Framework of HKUST-1 Type Zhigang Gu, a Lars Heinke, a,* Christof Wöll a, Tobias Neumann,

More information

Bridging Scales Through Wavefunction Analysis

Bridging Scales Through Wavefunction Analysis Bridging Scales Through Wavefunction Analysis Felix Plasser Institute for Theoretical Chemistry, University of Vienna Excited States Bridging Scales Marseille, November 7 10, 2016 F. Plasser Wavefunction

More information

5.4. Electronic structure of water

5.4. Electronic structure of water 5.4. Electronic structure of water Water belongs to C 2v point group, we have discussed the corresponding character table. Here it is again: C 2v E C 2 σ v (yz) σ v (xz) A 1 1 1 1 1 A 2 1 1-1 -1 B 1 1-1

More information

Introduction to Second-quantization I

Introduction to Second-quantization I Introduction to Second-quantization I Jeppe Olsen Lundbeck Foundation Center for Theoretical Chemistry Department of Chemistry, University of Aarhus September 19, 2011 Jeppe Olsen (Aarhus) Second quantization

More information

Introduction to Computational Chemistry

Introduction to Computational Chemistry Introduction to Computational Chemistry Vesa Hänninen Laboratory of Physical Chemistry Chemicum 4th floor vesa.hanninen@helsinki.fi September 10, 2013 Lecture 3. Electron correlation methods September

More information

Supporting Information

Supporting Information Supporting Information Improved Segmented All-Electron Relativistically Contracted Basis Sets for the Lanthanides Daniel Aravena, Frank Neese, Dimitrios A. Pantazis CONTENTS Table S1. SAHF total energies

More information

Quantum mechanics can be used to calculate any property of a molecule. The energy E of a wavefunction Ψ evaluated for the Hamiltonian H is,

Quantum mechanics can be used to calculate any property of a molecule. The energy E of a wavefunction Ψ evaluated for the Hamiltonian H is, Chapter : Molecules Quantum mechanics can be used to calculate any property of a molecule The energy E of a wavefunction Ψ evaluated for the Hamiltonian H is, E = Ψ H Ψ Ψ Ψ 1) At first this seems like

More information

Chapter 10: Chemical Bonding II. Bonding Theories

Chapter 10: Chemical Bonding II. Bonding Theories Chapter 10: Chemical Bonding II Dr. Chris Kozak Memorial University of Newfoundland, Canada Bonding Theories Previously, we saw how the shapes of molecules can be predicted from the orientation of electron

More information

I. CSFs Are Used to Express the Full N-Electron Wavefunction

I. CSFs Are Used to Express the Full N-Electron Wavefunction Chapter 11 One Must be Able to Evaluate the Matrix Elements Among Properly Symmetry Adapted N- Electron Configuration Functions for Any Operator, the Electronic Hamiltonian in Particular. The Slater-Condon

More information

A CHEMIST'S GUIDE TO VALENCE BOND THEORY

A CHEMIST'S GUIDE TO VALENCE BOND THEORY A CHEMIST'S GUIDE TO VALENCE BOND THEORY Sason Shaik The Hebrew University Jerusalem, Israel Philippe C. Hiberty Universite de Paris-Sud Orsay, France BICENTENNIAL 3ICCNTENNIAL WILEY-INTERSCIENCE A JOHN

More information

1 Rayleigh-Schrödinger Perturbation Theory

1 Rayleigh-Schrödinger Perturbation Theory 1 Rayleigh-Schrödinger Perturbation Theory All perturbative techniques depend upon a few simple assumptions. The first of these is that we have a mathematical expression for a physical quantity for which

More information

Lecture 3: Quantum Satis*

Lecture 3: Quantum Satis* Lecture 3: Quantum Satis* Last remarks about many-electron quantum mechanics. Everything re-quantized! * As much as needed, enough. Electron correlation Pauli principle Fermi correlation Correlation energy

More information

Molecular Orbital Theory This means that the coefficients in the MO will not be the same!

Molecular Orbital Theory This means that the coefficients in the MO will not be the same! Diatomic molecules: Heteronuclear molecules In heteronuclear diatomic molecules, the relative contribution of atomic orbitals to each MO is not equal. Some MO s will have more contribution from AO s on

More information

LUMO + 1 LUMO. Tómas Arnar Guðmundsson Report 2 Reikniefnafræði G

LUMO + 1 LUMO. Tómas Arnar Guðmundsson Report 2 Reikniefnafræði G Q1: Display all the MOs for N2 in your report and classify each one of them as bonding, antibonding or non-bonding, and say whether the symmetry of the orbital is σ or π. Sketch a molecular orbital diagram

More information

Problem Set 2 Due Thursday, October 1, & & & & # % (b) Construct a representation using five d orbitals that sit on the origin as a basis:

Problem Set 2 Due Thursday, October 1, & & & & # % (b) Construct a representation using five d orbitals that sit on the origin as a basis: Problem Set 2 Due Thursday, October 1, 29 Problems from Cotton: Chapter 4: 4.6, 4.7; Chapter 6: 6.2, 6.4, 6.5 Additional problems: (1) Consider the D 3h point group and use a coordinate system wherein

More information

A trigonal prismatic mononuclear cobalt(ii) complex showing single-molecule magnet behavior

A trigonal prismatic mononuclear cobalt(ii) complex showing single-molecule magnet behavior Supplementary information for A trigonal prismatic mononuclear cobalt(ii) complex showing single-molecule magnet behavior by Valentin V. Novikov*, Alexander A. Pavlov, Yulia V. Nelyubina, Marie-Emmanuelle

More information

Exchange Mechanisms. Erik Koch Institute for Advanced Simulation, Forschungszentrum Jülich. lecture notes:

Exchange Mechanisms. Erik Koch Institute for Advanced Simulation, Forschungszentrum Jülich. lecture notes: Exchange Mechanisms Erik Koch Institute for Advanced Simulation, Forschungszentrum Jülich lecture notes: www.cond-mat.de/events/correl Magnetism is Quantum Mechanical QUANTUM MECHANICS THE KEY TO UNDERSTANDING

More information

Lecture 9. Hartree Fock Method and Koopman s Theorem

Lecture 9. Hartree Fock Method and Koopman s Theorem Lecture 9 Hartree Fock Method and Koopman s Theorem Ψ(N) is approximated as a single slater determinant Φ of N orthogonal One electron spin-orbitals. One electron orbital φ i = φ i (r) χ i (σ) χ i (σ)

More information

Lecture 12. Symmetry Operations. NC State University

Lecture 12. Symmetry Operations. NC State University Chemistry 431 Lecture 12 Group Theory Symmetry Operations NC State University Wave functions as the basis for irreducible representations The energy of the system will not change when symmetry Operations

More information

LS coupling. 2 2 n + H s o + H h f + H B. (1) 2m

LS coupling. 2 2 n + H s o + H h f + H B. (1) 2m LS coupling 1 The big picture We start from the Hamiltonian of an atomic system: H = [ ] 2 2 n Ze2 1 + 1 e 2 1 + H s o + H h f + H B. (1) 2m n e 4πɛ 0 r n 2 4πɛ 0 r nm n,m Here n runs pver the electrons,

More information

Supporting Information. Nonclassical Single-State Reactivity of an Oxo- Iron(IV) Complex Confined to Triplet Pathways

Supporting Information. Nonclassical Single-State Reactivity of an Oxo- Iron(IV) Complex Confined to Triplet Pathways Supporting Information for Nonclassical Single-State Reactivity of an Oxo- Iron(IV) Complex Confined to Triplet Pathways Claudia Kupper, ǁ Bhaskar Mondal, ǁ Joan Serrano-Plana, Iris Klawitter, Frank Neese,

More information

Chapter 2. Model Problems That Form Important Starting Points

Chapter 2. Model Problems That Form Important Starting Points Chapter 2. Model Problems That Form Important Starting Points The model problems discussed in this Chapter form the basis for chemists understanding of the electronic states of atoms, molecules, nano-clusters,

More information

PAPER:2, PHYSICAL CHEMISTRY-I QUANTUM CHEMISTRY. Module No. 34. Hückel Molecular orbital Theory Application PART IV

PAPER:2, PHYSICAL CHEMISTRY-I QUANTUM CHEMISTRY. Module No. 34. Hückel Molecular orbital Theory Application PART IV Subject PHYSICAL Paper No and Title TOPIC Sub-Topic (if any), PHYSICAL -II QUANTUM Hückel Molecular orbital Theory Module No. 34 TABLE OF CONTENTS 1. Learning outcomes. Hückel Molecular Orbital (HMO) Theory

More information

ELEMENTARY BAND THEORY

ELEMENTARY BAND THEORY ELEMENTARY BAND THEORY PHYSICIST Solid state band Valence band, VB Conduction band, CB Fermi energy, E F Bloch orbital, delocalized n-doping p-doping Band gap, E g Direct band gap Indirect band gap Phonon

More information

Lec20 Fri 3mar17

Lec20 Fri 3mar17 564-17 Lec20 Fri 3mar17 [PDF]GAUSSIAN 09W TUTORIAL www.molcalx.com.cn/wp-content/uploads/2015/01/gaussian09w_tutorial.pdf by A Tomberg - Cited by 8 - Related articles GAUSSIAN 09W TUTORIAL. AN INTRODUCTION

More information

Photoinduced Water Oxidation at the Aqueous. GaN Interface: Deprotonation Kinetics of. the First Proton-Coupled Electron-Transfer Step

Photoinduced Water Oxidation at the Aqueous. GaN Interface: Deprotonation Kinetics of. the First Proton-Coupled Electron-Transfer Step Supporting Information Photoinduced Water Oxidation at the Aqueous Interface: Deprotonation Kinetics of the First Proton-Coupled Electron-Transfer Step Mehmed Z. Ertem,,,* eerav Kharche,,* Victor S. Batista,

More information

Density matrix functional theory vis-á-vis density functional theory

Density matrix functional theory vis-á-vis density functional theory Density matrix functional theory vis-á-vis density functional theory 16.4.007 Ryan Requist Oleg Pankratov 1 Introduction Recently, there has been renewed interest in density matrix functional theory (DMFT)

More information

Chemical Bonding in "Simple" Compounds. Valence Bond Analysis of Carbon Monoxide, Dioxide and Suboxide. Francesca Perolari

Chemical Bonding in Simple Compounds. Valence Bond Analysis of Carbon Monoxide, Dioxide and Suboxide. Francesca Perolari Chemical Bonding in "Simple" Compounds Valence Bond Analysis of Carbon Monoxide, Dioxide and Suboxide Francesca Perolari First supervisor: dr. Remco W.A. Havenith Second supervisor: prof. dr. Shirin S.

More information

MOLECULAR ORBITAL THEORY Chapter 10.8, Morrison and Boyd

MOLECULAR ORBITAL THEORY Chapter 10.8, Morrison and Boyd MOLECULAR ORBITAL THEORY Chapter 10.8, Morrison and Boyd more understanding: why oxygen is paramagnetic, why H2 + exists; explanation of excited electronic states (e.g., visible spectra) eliminates need

More information

Section 3 Electronic Configurations, Term Symbols, and States

Section 3 Electronic Configurations, Term Symbols, and States Section 3 Electronic Configurations, Term Symbols, and States Introductory Remarks- The Orbital, Configuration, and State Pictures of Electronic Structure One of the goals of quantum chemistry is to allow

More information

Supporting Information

Supporting Information Supporting Information Synthesis and Characterization of Quarteranthene: Elucidating the Characteristics of the Edge State of Graphene Nanoribbons at the Molecular Level Akihito Konishi, Yasukazu Hirao,

More information

Hartree-Fock-Roothan Self-Consistent Field Method

Hartree-Fock-Roothan Self-Consistent Field Method Hartree-Fock-Roothan Self-Consistent Field Method 1. Helium Here is a summary of the derivation of the Hartree-Fock equations presented in class. First consider the ground state of He and start with with

More information

Chemistry 3211 Coordination Chemistry Part 3 Ligand Field and Molecular Orbital Theory

Chemistry 3211 Coordination Chemistry Part 3 Ligand Field and Molecular Orbital Theory Chemistry 3211 Coordination Chemistry Part 3 Ligand Field and Molecular Orbital Theory Electronic Structure of Six and Four-Coordinate Complexes Using Crystal Field Theory, we can generate energy level

More information

Theoretical study of the unusual potential energy curve of the A [sup 1]Σ[sup +] state of AgH

Theoretical study of the unusual potential energy curve of the A [sup 1]Σ[sup +] state of AgH Theoretical study of the unusual potential energy curve of the A [sup 1]Σ[sup +] state of AgH Henryk A. Witek, Dmitri G. Fedorov, Kimihiko Hirao, Alexandra Viel, Per-Olof Widmark To cite this version:

More information

Organic Chemistry. Review Information for Unit 1. Atomic Structure MO Theory Chemical Bonds

Organic Chemistry. Review Information for Unit 1. Atomic Structure MO Theory Chemical Bonds Organic Chemistry Review Information for Unit 1 Atomic Structure MO Theory Chemical Bonds Atomic Structure Atoms are the smallest representative particle of an element. Three subatomic particles: protons

More information

DFT EXERCISES. FELIPE CERVANTES SODI January 2006

DFT EXERCISES. FELIPE CERVANTES SODI January 2006 DFT EXERCISES FELIPE CERVANTES SODI January 2006 http://www.csanyi.net/wiki/space/dftexercises Dr. Gábor Csányi 1 Hydrogen atom Place a single H atom in the middle of a largish unit cell (start with a

More information

Three Lectures on DMRG in Quantum Chemistry

Three Lectures on DMRG in Quantum Chemistry Three Lectures on DMRG in Quantum Chemistry Markus Reiher Laboratorium für Physikalische Chemie, ETH Zürich, Switzerland http://www.reiher.ethz.ch February 2014 Version: 1.2 17/02/2014 DMRG in Quantum

More information

Insights on Spin Polarization through the Spin Density Source Function. Electronic Supplementary Information (ESI)

Insights on Spin Polarization through the Spin Density Source Function. Electronic Supplementary Information (ESI) Electronic Supplementary Material (ESI) for Chemical Science. This journal is The Royal Society of Chemistry 2015 Insights on Spin Polarization through the Spin Density Source Function Carlo Gatti*,,,

More information

Simulating Chemistry using Quantum Computers, Annu. Rev. Phys. Chem. 62, 185 (2011).

Simulating Chemistry using Quantum Computers, Annu. Rev. Phys. Chem. 62, 185 (2011). I. Kassal, J. D. Whitfield, A. Perdomo-Ortiz, M-H. Yung, A. Aspuru-Guzik, Simulating Chemistry using Quantum Computers, Annu. Rev. Phys. Chem. 6, 185 (011). Martes Cuántico Universidad de Zaragoza, 19th

More information

Extended Wavefunction Analysis for Multireference Methods

Extended Wavefunction Analysis for Multireference Methods Extended Wavefunction Analysis for Multireference Methods Felix Plasser González Research Group Institute for Theoretical Chemistry, University of Vienna, Austria Vienna, 1 st April 2016 Introduction Analysis

More information

Supplementary information

Supplementary information Electronic Supplementary Material (ESI) for ChemComm. This journal is The Royal Society of Chemistry 2018 Supplementary information Computational Methodology The def2-tzpp basis set 1 (obtained from the

More information

v(r i r j ) = h(r i )+ 1 N

v(r i r j ) = h(r i )+ 1 N Chapter 1 Hartree-Fock Theory 1.1 Formalism For N electrons in an external potential V ext (r), the many-electron Hamiltonian can be written as follows: N H = [ p i i=1 m +V ext(r i )]+ 1 N N v(r i r j

More information

This is called a singlet or spin singlet, because the so called multiplicity, or number of possible orientations of the total spin, which is

This is called a singlet or spin singlet, because the so called multiplicity, or number of possible orientations of the total spin, which is 9. Open shell systems The derivation of Hartree-Fock equations (Chapter 7) was done for a special case of a closed shell systems. Closed shell means that each MO is occupied by two electrons with the opposite

More information

Symmetry and Molecular Orbitals (I)

Symmetry and Molecular Orbitals (I) Symmetry and Molecular Orbitals (I) Simple Bonding Model http://chiuserv.ac.nctu.edu.tw/~htchiu/chemistry/fall-2005/chemical-bonds.htm Lewis Structures Octet Rule Resonance Formal Charge Oxidation Number

More information

CHEM3023: Spins, Atoms and Molecules

CHEM3023: Spins, Atoms and Molecules CHEM3023: Spins, Atoms and Molecules Lecture 5 The Hartree-Fock method C.-K. Skylaris Learning outcomes Be able to use the variational principle in quantum calculations Be able to construct Fock operators

More information

Exercise 2.4 Molecular Orbital Energy Level Diagrams: Homonuclear Diatomics

Exercise 2.4 Molecular Orbital Energy Level Diagrams: Homonuclear Diatomics Exercise 2.4 Molecular rbital Energy Level Diagrams: Homonuclear Diatomics This exercise assumes that you are familiar with the count and sort algorithm described in Exercise 2.3. The table of atomic orbital

More information

Spin liquids on ladders and in 2d

Spin liquids on ladders and in 2d Spin liquids on ladders and in 2d MPA Fisher (with O. Motrunich) Minnesota, FTPI, 5/3/08 Interest: Quantum Spin liquid phases of 2d Mott insulators Background: Three classes of 2d Spin liquids a) Topological

More information

Chemistry 431. Lecture 14. Wave functions as a basis Diatomic molecules Polyatomic molecules Huckel theory. NC State University

Chemistry 431. Lecture 14. Wave functions as a basis Diatomic molecules Polyatomic molecules Huckel theory. NC State University Chemistry 431 Lecture 14 Wave functions as a basis Diatomic molecules Polyatomic molecules Huckel theory NC State University Wave functions as the basis for irreducible representations The energy of the

More information

Chemistry 2. Lecture 1 Quantum Mechanics in Chemistry

Chemistry 2. Lecture 1 Quantum Mechanics in Chemistry Chemistry 2 Lecture 1 Quantum Mechanics in Chemistry Your lecturers 8am Assoc. Prof Timothy Schmidt Room 315 timothy.schmidt@sydney.edu.au 93512781 12pm Assoc. Prof. Adam J Bridgeman Room 222 adam.bridgeman@sydney.edu.au

More information

Spin Peierls Effect in Spin Polarization of Fractional Quantum Hall States. Surface Science (2) P.1040-P.1046

Spin Peierls Effect in Spin Polarization of Fractional Quantum Hall States. Surface Science (2) P.1040-P.1046 Title Author(s) Spin Peierls Effect in Spin of Fractional Quantum Hall States Sasaki, Shosuke Citation Surface Science. 566-568(2) P.1040-P.1046 Issue Date 2004-09-20 Text Version author URL http://hdl.handle.net/11094/27149

More information

problem very complex is applied to bonding in a molecule as a whole i.e., includes interaction of all nuclei & e s

problem very complex is applied to bonding in a molecule as a whole i.e., includes interaction of all nuclei & e s CB VII Molecular Orbital (MO) Theory Ref 11: 5 14-1 General further improvement on Lewis, VSEPR & VB theory; resulting in better info on: bond energy bond order magnetic properties of molecules...... 14-2

More information

Molecular-Orbital Theory

Molecular-Orbital Theory Prof. Dr. I. Nasser atomic and molecular physics -551 (T-11) April 18, 01 Molecular-Orbital Theory You have to explain the following statements: 1- Helium is monatomic gas. - Oxygen molecule has a permanent

More information

Molecular Orbital Theory and Charge Transfer Excitations

Molecular Orbital Theory and Charge Transfer Excitations Molecular Orbital Theory and Charge Transfer Excitations Chemistry 123 Spring 2008 Dr. Woodward Molecular Orbital Diagram H 2 Antibonding Molecular Orbital (Orbitals interfere destructively) H 1s Orbital

More information

Electronic Supplementary Information Contents

Electronic Supplementary Information Contents Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is the Owner Societies 2017 Electronic Supplementary Information Contents 1. Cartesian coordinates of M(acac)

More information

Lecture 26: Qualitative Molecular Orbital Theory: Hückel Theory

Lecture 26: Qualitative Molecular Orbital Theory: Hückel Theory MASSACHUSETTS INSTITUTE OF TECHNOLOGY 5.6 Physical Chemistry I Fall, 07 Professor Robert W. Field Lecture 6: Qualitative Molecular Orbital Theory: Hückel Theory Models in Physical Chemistry Our job is

More information

CHAPTER 11 MOLECULAR ORBITAL THEORY

CHAPTER 11 MOLECULAR ORBITAL THEORY CHAPTER 11 MOLECULAR ORBITAL THEORY Molecular orbital theory is a conceptual extension of the orbital model, which was so successfully applied to atomic structure. As was once playfuly remarked, a molecue

More information

F Orbitals and Metal-Ligand Bonding in Octahedral Complexes Ken Mousseau

F Orbitals and Metal-Ligand Bonding in Octahedral Complexes Ken Mousseau F Orbitals and Metal-Ligand Bonding in Octahedral Complexes Ken Mousseau I. Abstract The independent study will compare metal-ligand bonding in octahedral complexes with rare lanthanide metals. A comparison

More information

Chemistry 543--Final Exam--Keiderling May 5, pm SES

Chemistry 543--Final Exam--Keiderling May 5, pm SES Chemistry 543--Final Exam--Keiderling May 5,1992 -- 1-5pm -- 174 SES Please answer all questions in the answer book provided. Make sure your name is clearly indicated and that the answers are clearly numbered,

More information

Chem Spring, 2017 Assignment 5 - Solutions

Chem Spring, 2017 Assignment 5 - Solutions Page 1 of 10 Chem 370 - Spring, 2017 Assignment 5 - Solutions 5.1 Additional combinations are p z ± d z 2, p x ±d xz, and p y ±d yz. p z ± d z 2 p x ±d xz or p y ±d yz 5.2 a. Li 2 has the configuration

More information

Molecular Orbital Theory and Charge Transfer Excitations

Molecular Orbital Theory and Charge Transfer Excitations Molecular Orbital Theory and Charge Transfer Excitations Chemistry 123 Spring 2008 Dr. Woodward Molecular Orbital Diagram H 2 Antibonding Molecular Orbital (Orbitals interfere destructively) H 1s Orbital

More information

The symmetry properties & relative energies of atomic orbitals determine how they react to form molecular orbitals. These molecular orbitals are then

The symmetry properties & relative energies of atomic orbitals determine how they react to form molecular orbitals. These molecular orbitals are then 1 The symmetry properties & relative energies of atomic orbitals determine how they react to form molecular orbitals. These molecular orbitals are then filled with the available electrons according to

More information

Density Functional Theory for Electrons in Materials

Density Functional Theory for Electrons in Materials Density Functional Theory for Electrons in Materials Richard M. Martin Department of Physics and Materials Research Laboratory University of Illinois at Urbana-Champaign 1 Density Functional Theory for

More information

Summary lecture II. Graphene exhibits a remarkable linear and gapless band structure

Summary lecture II. Graphene exhibits a remarkable linear and gapless band structure Summary lecture II Bloch theorem: eigen functions of an electron in a perfectly periodic potential have the shape of plane waves modulated with a Bloch factor that possess the periodicity of the potential

More information

Principles of Quantum Mechanics

Principles of Quantum Mechanics Principles of Quantum Mechanics - indistinguishability of particles: bosons & fermions bosons: total wavefunction is symmetric upon interchange of particle coordinates (space,spin) fermions: total wavefuncftion

More information