Processing of Cry3Bb1 and Cry34Ab1/Cry35Ab1 in the Diabrotica midgut

Size: px
Start display at page:

Download "Processing of Cry3Bb1 and Cry34Ab1/Cry35Ab1 in the Diabrotica midgut"

Transcription

1 COST Action 862 Bacterial Toxins for Insect Control Working Group 3 Integrated Pest Management Workshop Bt-toxins against Diabrotica: Potential and prospective use in Europe University of Kiel, Salzau Castle, Germany 27 th March 2009 Processing of Cry3Bb1 and Cry34Ab1/Cry35Ab1 in the Diabrotica midgut Renate Kaiser-Alexnat Julius Kühn-Institute Institute for Biological Control Darmstadt, Germany

2 Potential resistance mechanisms Depending on the mode of action, the resistance of insects to B.t. toxins can occur at any step of the toxic pathway. This includes as its main steps the enzymatic digestion of B.t. toxins with proteases present in the midgut fluid and the binding of B.t. toxins to specific receptors of the midgut epithelium. Protease-mediated resistance qualitative and quantitative changes in protease activities in the midgut fluid Receptor-mediated resistance alternate toxin binding to specific receptors in the midgut epithelium

3 Studies on the processing of B.t. toxins in the midgut of Western corn rootworm third instar larvae Protease activities in the midgut fluid Proteolytic processing of B.t. toxins with midgut fluid Binding of B.t. toxins to receptors of the midgut epithelium (binding analysis)

4 Preparation of Diabrotica midguts foregut midgut hindgut Digestive system of Chrysomelidae The average of the ph values of the midgut fluid was 5.75.

5 Studies on the processing of B.t. toxins in the midgut of Western corn rootworm third instar larvae Protease activities in the midgut fluid Proteolytic processing of B.t. toxins with midgut fluid Binding of B.t. toxins to receptors of the midgut epithelium (binding analysis)

6 Photometrical tests pna substrate processing [nmol/ml/min] For the identification and quantification of protease activities in the midgut fluid, photometric tests with specific chromogenic substrates, mainly peptidyl-p-nitroanilide (pna) substrates, and specific inhibitors were conducted. Inhibitor concentration [µm]

7 Processing of pna substrates

8 Comparison of pna substrate processing activities Serine endopeptidases Cysteine endopeptidases Metallo endopeptidases Exopeptidases

9 Aspartic endopeptidase pepsin Pepsin-activity in midgut fluid of susceptible WCR 3 rd instar larvae

10 Studies on the processing of B.t. toxins in the midgut of Western corn rootworm third instar larvae Protease activities in the midgut fluid Proteolytic processing of B.t. toxins with midgut fluid Binding of B.t. toxins to receptors of the midgut epithelium (binding analysis)

11 Proteolytic processing of Cry3Bb1 with midgut fluid 60 min incubation Proteolytic processing of B.t. corn-toxin Cry3Bb1 with midgut fluid (DS) of third instar WCR larvae

12 Proteolytic processing of Cry34Ab1/Cry35Ab1 with midgut fluid 30 min incubation 30 min incubation Proteolytic processing of the binary B.t. toxin Cry34Ab1/Cry35Ab1 with midgut fluid (DS) of third instar WCR larvae

13 Studies on the processing of B.t. toxins in the midgut of Western corn rootworm third instar larvae Protease activities in the midgut fluid Proteolytic processing of B.t. toxins with midgut fluid Binding of B.t. toxins to receptors of the midgut epithelium (binding analysis)

14 Binding analysis - method Objectives proof of the binding of B.t. toxins to the midgut epithelium characterization of receptors studies on binding site competition between B.t. toxins Steps preparation of intact BBMV s separation with SDS-PAGE transfer to a membrane (western-blot) incubation with the B.t. toxins (ligand-blot) Proof of the binding biotinylation of the B.t. toxins streptavidin-horseradish-peroxidaseconjugat and ECL-system

15 Binding analysis test system

16 Binding analysis Cry3Bb1 vs. Cry34Ab1/Cry35Ab1

17 Acknowledgments Monsanto Cry3Bb1 ARS Patent Culture Collection DOW AgroSciences Cry34Ab1/Cry35Ab1 Rearing Diabrotica larvae, Preparation of midguts Kai Gloyna, Ines Rogotzki BTL Bio-Test Labor GmbH Biochemical work Simon Feiertag JKI Darmstadt

European corn borer (Ostrinia nubilalis): Studies on proteinase activity and proteolytical processing of the B.t.-toxin Cry1Ab in transgenic corn

European corn borer (Ostrinia nubilalis): Studies on proteinase activity and proteolytical processing of the B.t.-toxin Cry1Ab in transgenic corn GMOs in Integrated Production IOBC wprs Bulletin Vol. 27 (3) 2004 pp. 97-102 European corn borer (Ostrinia nubilalis): Studies on proteinase activity and proteolytical processing of the B.t.-toxin Cry1Ab

More information

Ch 4: Cellular Metabolism, Part 1

Ch 4: Cellular Metabolism, Part 1 Developed by John Gallagher, MS, DVM Ch 4: Cellular Metabolism, Part 1 Energy as it relates to Biology Energy for synthesis and movement Energy transformation Enzymes and how they speed reactions Metabolism

More information

Leptinotarsa decemlineata (Say) (Col., Chrysomelidae)

Leptinotarsa decemlineata (Say) (Col., Chrysomelidae) h ttp:/ / jer.entomology.ir Leptinotarsa decemlineata (Say) (Col., Chrysomelidae) * Leptinotarsa decemlineata (Say) farazmand@entomology.ir * Leptinotarsa decemlineata (Say) (Col., Chrysomelidae) ( (Hoffmann

More information

Binary Bacterial Toxins

Binary Bacterial Toxins Binary Bacterial Toxins C2- and VIP-Toxin Michael Leuber Biotechnology University Würzburg 1 Bacterial Toxins (1) Porin-like toxins (2) Toxins that bind to or modify existing ion channels (3) Toxins with

More information

Supplemental Information. The Mitochondrial Fission Receptor MiD51. Requires ADP as a Cofactor

Supplemental Information. The Mitochondrial Fission Receptor MiD51. Requires ADP as a Cofactor Structure, Volume 22 Supplemental Information The Mitochondrial Fission Receptor MiD51 Requires ADP as a Cofactor Oliver C. Losón, Raymond Liu, Michael E. Rome, Shuxia Meng, Jens T. Kaiser, Shu-ou Shan,

More information

The Caspase System: a potential role in muscle proteolysis and meat quality? Tim Parr

The Caspase System: a potential role in muscle proteolysis and meat quality? Tim Parr The Caspase System: a potential role in muscle proteolysis and meat quality? Tim Parr Caroline Kemp, Ron Bardsley,, Peter Buttery Division of Nutritional Sciences, School of Biosciences, University of

More information

C a h p a t p e t r e r 6 E z n y z m y e m s

C a h p a t p e t r e r 6 E z n y z m y e m s Chapter 6 Enzymes 4. Examples of enzymatic reactions acid-base catalysis: give and take protons covalent catalysis: a transient covalent bond is formed between the enzyme and the substrate metal ion catalysis:

More information

targets. clustering show that different complex pathway

targets. clustering show that different complex pathway Supplementary Figure 1. CLICR allows clustering and activation of cytoplasmic protein targets. (a, b) Upon light activation, the Cry2 (red) and LRP6c (green) components co-cluster due to the heterodimeric

More information

Biochemistry. Lecture 8 Enzyme Kinetics

Biochemistry. Lecture 8 Enzyme Kinetics Biochemistry Lecture 8 Enzyme Kinetics Why Enzymes? igher reaction rates Greater reaction specificity Milder reaction conditions Capacity for regulation C - - C N 2 - C N 2 - C - C Chorismate mutase -

More information

Preparation of Tritium Labeled Compounds and Their Scintillation Proximity Assays

Preparation of Tritium Labeled Compounds and Their Scintillation Proximity Assays Preparation of Tritium Labeled Compounds and Their Scintillation Proximity Assays Michael P. O'Malley*, Yui S. Tang, and Nadine M. Gan PerkinElmer Health Sciences, Inc. * Main author: e-mail Mike.O Malley@Perkinelmer.com

More information

HISTO-MORPHOLOGY OF THE LARVAE OF Aedes aeygypti (L.) (DIPTERA: CULICIDAE) Begum, M.

HISTO-MORPHOLOGY OF THE LARVAE OF Aedes aeygypti (L.) (DIPTERA: CULICIDAE) Begum, M. HISTO-MORPHOLOGY OF THE LARVAE OF Aedes aeygypti (L.) (DIPTERA: CULICIDAE) Begum, M. Department of Zoology, University of Dhaka, Dhaka-1000, Bangladesh Abstract The external morphology fo the fourth instar

More information

ISSN: International Journal of Advanced Research in Science, Engineering and Technology. Vol. 3, Issue 12, December 2016

ISSN: International Journal of Advanced Research in Science, Engineering and Technology. Vol. 3, Issue 12, December 2016 Changes in Cytochrome P450 activity in 4 th and 5 th instar larvae of Samiaricini on exposure to the two organophosphorous pesticides, malathion and dimethoate- A comparative study NavanitaBhagawati, Rita

More information

Physiological impact of a Bacillus thuringiensis toxin on the black cutworm that enhances baculovirus pathogenicity

Physiological impact of a Bacillus thuringiensis toxin on the black cutworm that enhances baculovirus pathogenicity Graduate Theses and Dissertations Graduate College 2009 Physiological impact of a Bacillus thuringiensis toxin on the black cutworm that enhances baculovirus pathogenicity Nina Schmidt Iowa State University

More information

Lecture 11: Enzyme Kinetics, Part I

Lecture 11: Enzyme Kinetics, Part I Biological Chemistry Laboratory Biology 3515/Chemistry 3515 Spring 2018 Lecture 11: Enzyme Kinetics, Part I 13 February 2018 c David P. Goldenberg University of Utah goldenberg@biology.utah.edu Back to

More information

Enzyme Catalysis & Biotechnology

Enzyme Catalysis & Biotechnology L28-1 Enzyme Catalysis & Biotechnology Bovine Pancreatic RNase A Biochemistry, Life, and all that L28-2 A brief word about biochemistry traditionally, chemical engineers used organic and inorganic chemistry

More information

Pesticide Lesson Plan

Pesticide Lesson Plan Chemical Control of Insect Pests Cultural Mechanical Biological Chemical Pesticide Lesson Plan Theory (Lecture) Issues surrounding pesticide use Kinds of pesticides How they are named Insecticide families

More information

(kilo ) or heat energy (kilo ) C. Organisms carry out conversions between potential energy and kinetic energy 1. Potential energy is energy;

(kilo ) or heat energy (kilo ) C. Organisms carry out conversions between potential energy and kinetic energy 1. Potential energy is energy; I. Biological work requires energy A. Energy is the to do work B. Energy is expressed in units of work (kilo ) or heat energy (kilo ) C. Organisms carry out conversions between potential energy and kinetic

More information

pharmaceutical industry- drug discovery

pharmaceutical industry- drug discovery ombinatorial hemistry: molecular diversity "Synthesis and pplications of Small Molecule Libraries." Thompson, L..; llman, J.. hem. ev.,, -00. "esign, Synthesis, and valuation of Small-Molecule Libraries.

More information

Gürol M. Süel, Steve W. Lockless, Mark A. Wall, and Rama Ra

Gürol M. Süel, Steve W. Lockless, Mark A. Wall, and Rama Ra Gürol M. Süel, Steve W. Lockless, Mark A. Wall, and Rama Ranganathan, Evolutionarily conserved networks of residues mediate allosteric communication in proteins, Nature Structural Biology, vol. 10, no.

More information

Paraquat ELISA Kit. Catalog Number KA assays Version: 17. Intended for research use only.

Paraquat ELISA Kit. Catalog Number KA assays Version: 17. Intended for research use only. Paraquat ELISA Kit Catalog Number KA1424 96 assays Version: 17 Intended for research use only www.abnova.com Table of Contents Introduction... 3 Background... 3 Principle of the Assay... 3 General Information...

More information

Programmed Cell Death

Programmed Cell Death Programmed Cell Death Dewajani Purnomosari Department of Histology and Cell Biology Faculty of Medicine Universitas Gadjah Mada d.purnomosari@ugm.ac.id What is apoptosis? a normal component of the development

More information

An Introduction to Metabolism

An Introduction to Metabolism Chapter 8 An Introduction to Metabolism Dr. Wendy Sera Houston Community College Biology 1406 Key Concepts in Chapter 8 1. An organism s metabolism transforms matter and energy, subject to the laws of

More information

Analysis of Escherichia coli amino acid transporters

Analysis of Escherichia coli amino acid transporters Ph.D thesis Analysis of Escherichia coli amino acid transporters Presented by Attila Szvetnik Supervisor: Dr. Miklós Kálmán Biology Ph.D School University of Szeged Bay Zoltán Foundation for Applied Research

More information

The Mode of Action of the Bacillus thuringiensis Vegetative Insecticidal Protein Vip3A Differs from That of Cry1Ab -Endotoxin

The Mode of Action of the Bacillus thuringiensis Vegetative Insecticidal Protein Vip3A Differs from That of Cry1Ab -Endotoxin APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2003, p. 4648 4657 Vol. 69, No. 8 0099-2240/03/$08.00 0 DOI: 10.1128/AEM.69.8.4648 4657.2003 Copyright 2003, American Society for Microbiology. All Rights Reserved.

More information

ABSTRACT: 390 GENETIC VARIABILITY OF MTDNA FROM DIABROTICA SPECIOSA (GERMAR, 1824) (COLEOPTERA: CHYSOMELIDAE) BRAZILIAN POPULATIONS

ABSTRACT: 390 GENETIC VARIABILITY OF MTDNA FROM DIABROTICA SPECIOSA (GERMAR, 1824) (COLEOPTERA: CHYSOMELIDAE) BRAZILIAN POPULATIONS ABSTRACT: 390 GENETIC VARIABILITY OF MTDNA FROM DIABROTICA SPECIOSA (GERMAR, 1824) (COLEOPTERA: CHYSOMELIDAE) BRAZILIAN POPULATIONS YANO S A C¹, SILVA-BRANDÃO K L², AFONSO A P S³, MARTINELLI S 4 & SOSA-GÓMEZ

More information

MICROBIOLOGY REVIEWS. Introduction REVIEW ARTICLE. Liliana Pardo-López, Mario Soberón & Alejandra Bravo. Abstract

MICROBIOLOGY REVIEWS. Introduction REVIEW ARTICLE. Liliana Pardo-López, Mario Soberón & Alejandra Bravo. Abstract REVIEW ARTICLE Bacillus thuringiensis insecticidal three-domain Cry toxins: mode of action, insect resistance and consequences for crop protection Liliana Pardo-López, Mario Soberón & Alejandra Bravo Instituto

More information

MCB137: Physical Biology of the Cell Spring 2017 Homework 5: Statistical mechanics and Regulatory Biology (Due 3/14/17)

MCB137: Physical Biology of the Cell Spring 2017 Homework 5: Statistical mechanics and Regulatory Biology (Due 3/14/17) MCB137: Physical Biology of the Cell Spring 2017 Homework 5: Statistical mechanics and Regulatory Biology (Due 3/14/17) Hernan G Garcia March 9, 2017 1 A Feeling for the Numbers in Biology, Round Two Now

More information

Quantitative Proteomics

Quantitative Proteomics Quantitative Proteomics Quantitation AND Mass Spectrometry Condition A Condition B Identify and quantify differently expressed proteins resulting from a change in the environment (stimulus, disease) Lyse

More information

It s the amino acids!

It s the amino acids! Catalytic Mechanisms HOW do enzymes do their job? Reducing activation energy sure, but HOW does an enzyme catalysis reduce the energy barrier ΔG? Remember: The rate of a chemical reaction of substrate

More information

Supplementary Information

Supplementary Information Supplementary Information MAP2/Hoechst Hyp.-AP ph 6.5 Hyp.-SD ph 7.2 Norm.-SD ph 7.2 Supplementary Figure 1. Mitochondrial elongation in cortical neurons by acidosis. Representative images of neuronal

More information

BIOLOGY 10/11/2014. An Introduction to Metabolism. Outline. Overview: The Energy of Life

BIOLOGY 10/11/2014. An Introduction to Metabolism. Outline. Overview: The Energy of Life 8 An Introduction to Metabolism CAMPBELL BIOLOGY TENTH EDITION Reece Urry Cain Wasserman Minorsky Jackson Outline I. Forms of Energy II. Laws of Thermodynamics III. Energy and metabolism IV. ATP V. Enzymes

More information

MOLECULAR CELL BIOLOGY

MOLECULAR CELL BIOLOGY 1 Lodish Berk Kaiser Krieger scott Bretscher Ploegh Matsudaira MOLECULAR CELL BIOLOGY SEVENTH EDITION CHAPTER 13 Moving Proteins into Membranes and Organelles Copyright 2013 by W. H. Freeman and Company

More information

Structure based drug design and LIE models for GPCRs

Structure based drug design and LIE models for GPCRs Structure based drug design and LIE models for GPCRs Peter Kolb kolb@docking.org Shoichet Lab ACS 237 th National Meeting, March 24, 2009 p.1/26 [Acknowledgements] Brian Shoichet John Irwin Mike Keiser

More information

Kinetics Catalysis y Enzymes

Kinetics Catalysis y Enzymes Kinetics Catalysis Enzymes Catalysis involves lowering of the energy barrier ΔH ΔH A catalyst provides an alternative reaction pathway A catalyst provides an alternative reaction pathway with a lower activation

More information

Ch. 3 Metabolism and Enzymes

Ch. 3 Metabolism and Enzymes Ch. 3 Metabolism and Enzymes Originally prepared by Kim B. Foglia. Revised and adapted by Nhan A. Pham Flow of energy through life Life is built on chemical reactions that enable energy to flow through

More information

Challenges of Single Ion-Channel Biosensors

Challenges of Single Ion-Channel Biosensors Vanderbilt Institute for Integrative Biosystems Research and Education Instrumenting and Control the Single Cell Challenges of Single Ion-Channel Biosensors Fredrick Sachs (SUNY Buffalo) John P. Wikswo

More information

Techniques in Molecular Genetics Spectroscopy and Enzyme Assays

Techniques in Molecular Genetics Spectroscopy and Enzyme Assays Techniques in Molecular Genetics Spectroscopy and Enzyme Assays H.E. Schellhorn Spectroscopy Chromophore Molar Extinction Coefficient Absorbance Transmittance Spectroscopy Many biological materials have

More information

Chemical Reactions and the enzimes

Chemical Reactions and the enzimes Chemical Reactions and the enzimes LESSON N. 6 - PSYCHOBIOLOGY Chemical reactions consist of interatomic interactions that take place at the level of their orbital, and therefore different from nuclear

More information

An Introduction to Metabolism

An Introduction to Metabolism Chapter 8 An Introduction to Metabolism PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from

More information

An Introduction to Metabolism

An Introduction to Metabolism Chapter 8 An Introduction to Metabolism PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from

More information

Virulence of Emerging Clostridium difficile

Virulence of Emerging Clostridium difficile Virulence of Emerging Clostridium difficile Jimmy D. Ballard, Ph.D. Professor and Chairman Department of Microbiology and Immunology University of Oklahoma HSC TcdB 027/NAP1/BI A Toxin Better Than a Very

More information

5A Effects of receptor clustering and rebinding on intracellular signaling

5A Effects of receptor clustering and rebinding on intracellular signaling 5A Effects of receptor clustering and rebinding on intracellular signaling In the analysis of bacterial chemotaxis, we showed how receptor clustering can amplify a biochemical signal through cooperative

More information

Serine-7 but not serine-5 phosphorylation primes RNA polymerase II CTD for P-TEFb recognition

Serine-7 but not serine-5 phosphorylation primes RNA polymerase II CTD for P-TEFb recognition Supplementary Information to Serine-7 but not serine-5 phosphorylation primes RNA polymerase II CTD for P-TEFb recognition Nadine Czudnochowski 1,2, *, Christian A. Bösken 1, * & Matthias Geyer 1 1 Max-Planck-Institut

More information

Flow of Energy. Flow of Energy. Energy and Metabolism. Chapter 6

Flow of Energy. Flow of Energy. Energy and Metabolism. Chapter 6 Energy and Metabolism Chapter 6 Flow of Energy Energy: the capacity to do work -kinetic energy: the energy of motion -potential energy: stored energy Energy can take many forms: mechanical electric current

More information

Patrick: An Introduction to Medicinal Chemistry 5e Chapter 03

Patrick: An Introduction to Medicinal Chemistry 5e Chapter 03 01) Which of the following statements is not true regarding the active site of an enzyme? a. An active site is normally on the surface of an enzyme. b. An active site is normally hydrophobic in nature.

More information

Presentation Microcalorimetry for Life Science Research

Presentation Microcalorimetry for Life Science Research Presentation Microcalorimetry for Life Science Research MicroCalorimetry The Universal Detector Heat is either generated or absorbed in every chemical process Capable of thermal measurements over a wide

More information

An Introduction to Metabolism

An Introduction to Metabolism Chapter 8 An Introduction to Metabolism PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from

More information

Mathematical model for fragmentation of bacterial inclusion bodies 1

Mathematical model for fragmentation of bacterial inclusion bodies 1 Mathematical model for fragmentation of bacterial inclusion bodies 1 R. Cubarsi, M.M. Carrió 2 and A. Villaverde 2 Dept. Matemàtica Aplicada i Telemàtica Universitat Politècnica de Catalunya, Barcelona,

More information

An Introduction to Metabolism

An Introduction to Metabolism LECTURE PRESENTATIONS For CAMPBELL BIOLOGY, NINTH EDITION Jane B. Reece, Lisa A. Urry, Michael L. Cain, Steven A. Wasserman, Peter V. Minorsky, Robert B. Jackson Chapter 8 An Introduction to Metabolism

More information

Richik N. Ghosh, Linnette Grove, and Oleg Lapets ASSAY and Drug Development Technologies 2004, 2:

Richik N. Ghosh, Linnette Grove, and Oleg Lapets ASSAY and Drug Development Technologies 2004, 2: 1 3/1/2005 A Quantitative Cell-Based High-Content Screening Assay for the Epidermal Growth Factor Receptor-Specific Activation of Mitogen-Activated Protein Kinase Richik N. Ghosh, Linnette Grove, and Oleg

More information

Lecture 13: Data Analysis and Interpretation of the Michaelis-Menten Parameters

Lecture 13: Data Analysis and Interpretation of the Michaelis-Menten Parameters Biological Chemistry Laboratory Biology 3515/Chemistry 3515 Spring 2019 Lecture 13: Data Analysis and Interpretation of the Michaelis-Menten Parameters 19 February 2019 c David P. Goldenberg University

More information

Cystatin C ELISA. For the quantitative determination of cystatin C in human biological samples.

Cystatin C ELISA. For the quantitative determination of cystatin C in human biological samples. Cystatin C ELISA For the quantitative determination of cystatin C in human biological samples. Please read carefully due to Critical Changes, e.g., Calibrator concentration, Standard preparation. Please

More information

Quantification of Protein Half-Lives in the Budding Yeast Proteome

Quantification of Protein Half-Lives in the Budding Yeast Proteome Supporting Methods Quantification of Protein Half-Lives in the Budding Yeast Proteome 1 Cell Growth and Cycloheximide Treatment Three parallel cultures (17 ml) of each TAP-tagged strain were grown in separate

More information

SECOND PUBLIC EXAMINATION. Honour School of Physics Part C: 4 Year Course. Honour School of Physics and Philosophy Part C C7: BIOLOGICAL PHYSICS

SECOND PUBLIC EXAMINATION. Honour School of Physics Part C: 4 Year Course. Honour School of Physics and Philosophy Part C C7: BIOLOGICAL PHYSICS 2757 SECOND PUBLIC EXAMINATION Honour School of Physics Part C: 4 Year Course Honour School of Physics and Philosophy Part C C7: BIOLOGICAL PHYSICS TRINITY TERM 2011 Monday, 27 June, 9.30 am 12.30 pm Answer

More information

AP Biology. Metabolism & Enzymes

AP Biology. Metabolism & Enzymes Metabolism & Enzymes From food webs to the life of a cell energy energy energy Flow of energy through life: Life is built on chemical reactions transforming energy from one form to another organic molecules

More information

For the rapid, sensitive and accurate detection of active Caspase 9 in living cells

For the rapid, sensitive and accurate detection of active Caspase 9 in living cells ab65615 Caspase 9 (active) FITC Staining Kit Instructions for Use For the rapid, sensitive and accurate detection of active Caspase 9 in living cells This product is for research use only and is not intended

More information

Human papillomavirus,hpv ELISA Kit

Human papillomavirus,hpv ELISA Kit Human papillomavirus,hpv ELISA Kit Catalog No: E0787h 96 Tests Operating instructions www.eiaab.com FOR RESEARCH USE ONLY; NOT FOR THERAPEUTIC OR DIAGNOSTIC APPLICATIONS! PLEASE READ THROUGH ENTIRE PROCEDURE

More information

Chapter 6. Ground Rules Of Metabolism

Chapter 6. Ground Rules Of Metabolism Chapter 6 Ground Rules Of Metabolism Alcohol Dehydrogenase An enzyme Breaks down ethanol and other toxic alcohols Allows humans to drink Metabolism Is the totality of an organism s chemical reactions Arises

More information

From cell biology to Petri nets. Rainer Breitling, Groningen, NL David Gilbert, London, UK Monika Heiner, Cottbus, DE

From cell biology to Petri nets. Rainer Breitling, Groningen, NL David Gilbert, London, UK Monika Heiner, Cottbus, DE From cell biology to Petri nets Rainer Breitling, Groningen, NL David Gilbert, London, UK Monika Heiner, Cottbus, DE Biology = Concentrations Breitling / 2 The simplest chemical reaction A B irreversible,

More information

C. Introduction to Multicellularity

C. Introduction to Multicellularity C. Introduction to Multicellularity 1. Regulation of Organism Size by Cell Mass 2. Regulation of Extracellular Structure 3. Regulation of Cell Adhesion 4. Regulation of the Internal Aqueous Environment

More information

Protease Activation of the Entomocidal Protoxin of Bacillus thuringiensis subsp. kurstakit

Protease Activation of the Entomocidal Protoxin of Bacillus thuringiensis subsp. kurstakit APPLIED AND ENVIRONMENTAL MICROBIOLOGY, OCt. 1985, p. 737-742 99-224/85/1737-6$2./ Copyright X 1985, American Society for Microbiology Vol. 5, No. 4 Protease Activation of the Entomocidal Protoxin of Bacillus

More information

return in class, or Rm B

return in class, or Rm B Last lectures: Genetic Switches and Oscillators PS #2 due today bf before 3PM return in class, or Rm. 68 371B Naturally occurring: lambda lysis-lysogeny decision lactose operon in E. coli Engineered: genetic

More information

Drug binding and subtype selectivity in G-protein-coupled receptors

Drug binding and subtype selectivity in G-protein-coupled receptors Drug binding and subtype selectivity in G-protein-coupled receptors Albert C. Pan The Aspect of Time in Drug Design Schloss Rauischholzhausen Marburg, Germany Thursday, March 27 th, 2014 D. E. Shaw Research

More information

Identification of Early Intermediates of Caspase Activation Using Selective Inhibitors and Activity-Based Probes

Identification of Early Intermediates of Caspase Activation Using Selective Inhibitors and Activity-Based Probes Molecular Cell 23, 509 521, August 18, 2006 ª2006 Elsevier Inc. DOI 10.1016/j.molcel.2006.06.021 Identification of Early Intermediates of Caspase Activation Using Selective Inhibitors and Activity-Based

More information

Caspase 3 (active) Red Staining Kit

Caspase 3 (active) Red Staining Kit ab65617 Caspase 3 (active) Red Staining Kit Instructions for Use For the rapid, sensitive and accurate detection of activated Caspase 3 in living cells. This product is for research use only and is not

More information

Aplicació de la proteòmica a la cerca de Biomarcadors proteics Barcelona, 08 de Juny 2010

Aplicació de la proteòmica a la cerca de Biomarcadors proteics Barcelona, 08 de Juny 2010 Aplicació de la proteòmica a la cerca de Biomarcadors proteics Barcelona, 8 de Juny 21 Eliandre de Oliveira Plataforma de Proteòmica Parc Científic de Barcelona Protein Chemistry Proteomics Hypothesis-free

More information

Cell Death & Trophic Factors II. Steven McLoon Department of Neuroscience University of Minnesota

Cell Death & Trophic Factors II. Steven McLoon Department of Neuroscience University of Minnesota Cell Death & Trophic Factors II Steven McLoon Department of Neuroscience University of Minnesota 1 Remember? Neurotrophins are cell survival factors that neurons get from their target cells! There is a

More information

Unit 3. Enzymes. Catalysis and enzyme kinetics.

Unit 3. Enzymes. Catalysis and enzyme kinetics. Unit 3 Enzymes. Catalysis and enzyme kinetics. OUTLINE 3.1. Characteristics of biological catalysts. Coenzymes, cofactors, vitamins Enzyme nomenclature and classification 3.2. Enzyme catalysis. Transition

More information

Caspase 8 (active) Red Staining Kit

Caspase 8 (active) Red Staining Kit ab65618 Caspase 8 (active) Red Staining Kit Instructions for Use For the rapid, sensitive and accurate detection of activated Caspase 8 in living cells This product is for research use only and is not

More information

2013 W. H. Freeman and Company. 6 Enzymes

2013 W. H. Freeman and Company. 6 Enzymes 2013 W. H. Freeman and Company 6 Enzymes CHAPTER 6 Enzymes Key topics about enzyme function: Physiological significance of enzymes Origin of catalytic power of enzymes Chemical mechanisms of catalysis

More information

OXFORD BIOMEDICAL RESEARCH

OXFORD BIOMEDICAL RESEARCH Colorimetric Assay for Glutathione Product No. GT 10 For Research Use Only INTRODUCTION Glutathione (gamma-glutamylcysteinylglycine or GSH) is a naturally occuring tripeptide whose nucleophilic and reducing

More information

Bacterial strains, plasmids, and growth conditions. Bacterial strains and

Bacterial strains, plasmids, and growth conditions. Bacterial strains and I Text I Materials and Methods acterial strains, plasmids, and growth conditions. acterial strains and plasmids used in this study are listed in I Table. almonella enterica serovar Typhimurium strains

More information

Systems Biology Across Scales: A Personal View XIV. Intra-cellular systems IV: Signal-transduction and networks. Sitabhra Sinha IMSc Chennai

Systems Biology Across Scales: A Personal View XIV. Intra-cellular systems IV: Signal-transduction and networks. Sitabhra Sinha IMSc Chennai Systems Biology Across Scales: A Personal View XIV. Intra-cellular systems IV: Signal-transduction and networks Sitabhra Sinha IMSc Chennai Intra-cellular biochemical networks Metabolic networks Nodes:

More information

Cry toxin mode of action in susceptible and resistant Heliothis virescens larvae

Cry toxin mode of action in susceptible and resistant Heliothis virescens larvae Journal of Invertebrate Pathology 92 (2006) 166 171 www.elsevier.com/locate/yjipa Cry toxin mode of action in susceptible and resistant Heliothis virescens larvae Juan Luis Jurat-Fuentes a, Michael J.

More information

Supplementary Information. Synthesis and biological activity of a CXCR4-targeting bis(cyclam) lipid

Supplementary Information. Synthesis and biological activity of a CXCR4-targeting bis(cyclam) lipid Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry. This journal is The Royal Society of Chemistry 2018 Supplementary Information Synthesis and biological activity of a CXCR4-targeting

More information

CHEM 251 (4 credits): Description

CHEM 251 (4 credits): Description CHEM 251 (4 credits): Intermediate Reactions of Nucleophiles and Electrophiles (Reactivity 2) Description: An understanding of chemical reactivity, initiated in Reactivity 1, is further developed based

More information

C a h p a t p e t r e r 6 E z n y z m y e m s

C a h p a t p e t r e r 6 E z n y z m y e m s Chapter 6 Enzymes 1. An Introduction to Enzymes Enzymes are catalytically active biological macromolecules Enzymes are catalysts of biological systems Almost every biochemical reaction is catalyzed by

More information

Biol2174 Cell Physiology in Health & Disease

Biol2174 Cell Physiology in Health & Disease Biol2174 Cell Physiology in Health & Disease Lecture 4: Membrane Transport Proteins Kiaran Kirk Research School of Biology Learning objectives To understand: The need for membrane transport proteins in

More information

For the rapid, sensitive and accurate measurement of Caspase 9 activity in cell and tissue lysates.

For the rapid, sensitive and accurate measurement of Caspase 9 activity in cell and tissue lysates. ab65608 Caspase 9 Assay Kit (Colorimetric) Instructions for Use For the rapid, sensitive and accurate measurement of Caspase 9 activity in cell and tissue lysates. This product is for research use only

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION doi:10.1038/nature10244 a O07391_MYCAV/127-243 NLPC_HAEIN/80-181 SPR_SHIFL/79-183 P74160_SYNY3/112-245 O24914_HELPY/301-437 Q51835_PORGI/68-178 DPP6_BACSH/163-263 YKFC_BACSU/185-292 YDHO_ECOLI/153-263

More information

Catalysis. Instructor: Dr. Tsung-Lin Li Genomics Research Center Academia Sinica

Catalysis. Instructor: Dr. Tsung-Lin Li Genomics Research Center Academia Sinica Catalysis Instructor: Dr. Tsung-Lin Li Genomics Research Center Academia Sinica References: Biochemistry" by Donald Voet and Judith G. Voet Biochemistry" by Christopher K. Mathews, K. E. Van Hold and Kevin

More information

Human IL-1 beta ELISA Kit

Human IL-1 beta ELISA Kit For detection and measurement of human interleukin 1 beta Catalog #02004 Catalog #02005 2 Plates 10 Plates Product Description The Human Interleukin 1 beta (IL-1β) ELISA Kit is designed for the quantitative

More information

BMB Lecture 7. Allostery and Cooperativity

BMB Lecture 7. Allostery and Cooperativity BMB 178 2017 Lecture 7 October 18, 2017 Allostery and Cooperativity A means for exquisite control Allostery: the basis of enzymatic control From the Greek: allos = other stereos = solid or space Action

More information

Enzymes and Enzyme Kinetics I. Dr.Nabil Bashir

Enzymes and Enzyme Kinetics I. Dr.Nabil Bashir Enzymes and Enzyme Kinetics I Dr.Nabil Bashir Enzymes and Enzyme Kinetics I: Outlines Enzymes - Basic Concepts and Kinetics Enzymes as Catalysts Enzyme rate enhancement / Enzyme specificity Enzyme cofactors

More information

An Introduction to Metabolism

An Introduction to Metabolism Chapter 8 An Introduction to Metabolism Edited by Shawn Lester PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley

More information

Petri net models. tokens placed on places define the state of the Petri net

Petri net models. tokens placed on places define the state of the Petri net Petri nets Petri net models Named after Carl Adam Petri who, in the early sixties, proposed a graphical and mathematical formalism suitable for the modeling and analysis of concurrent, asynchronous distributed

More information

Retrieving hits through in silico screening and expert assessment M. N. Drwal a,b and R. Griffith a

Retrieving hits through in silico screening and expert assessment M. N. Drwal a,b and R. Griffith a Retrieving hits through in silico screening and expert assessment M.. Drwal a,b and R. Griffith a a: School of Medical Sciences/Pharmacology, USW, Sydney, Australia b: Charité Berlin, Germany Abstract:

More information

9/25/2011. Outline. Overview: The Energy of Life. I. Forms of Energy II. Laws of Thermodynamics III. Energy and metabolism IV. ATP V.

9/25/2011. Outline. Overview: The Energy of Life. I. Forms of Energy II. Laws of Thermodynamics III. Energy and metabolism IV. ATP V. Chapter 8 Introduction to Metabolism Outline I. Forms of Energy II. Laws of Thermodynamics III. Energy and metabolism IV. ATP V. Enzymes Overview: The Energy of Life Figure 8.1 The living cell is a miniature

More information

Toxicological Targets. Russell L. Carr Department of Basic Sciences College of Veterinary Medicine

Toxicological Targets. Russell L. Carr Department of Basic Sciences College of Veterinary Medicine Toxicological Targets Russell L. Carr Department of Basic Sciences College of Veterinary Medicine Toxicology Definitions = study of poisons Poison = any agent capable of producing a deleterious response

More information

Catalysis is Necessary for Life. Chapter 6 Enzymes. Why Study Enzymes? Enzymes are Biological Catalysts

Catalysis is Necessary for Life. Chapter 6 Enzymes. Why Study Enzymes? Enzymes are Biological Catalysts Chapter 6 Enzymes Catalysis is Necessary for Life Definition: a catalyst is a substance that speeds up a chemical reaction, while emerging unchanged at the end Corollary A: a catalyst is never used up,

More information

Protease Inhibitor Cocktail A (1 tablet / 7 10 ml, Roche Cat# ) Protease inhibitor Cocktail B (0.5ml per 250ml, Calbiochem Cat# )

Protease Inhibitor Cocktail A (1 tablet / 7 10 ml, Roche Cat# ) Protease inhibitor Cocktail B (0.5ml per 250ml, Calbiochem Cat# ) Protocol for Western Blotting Tissue/Cell Sample Preparation Lysis Buffer 1 (ph8.0) o 50mM Tris-Cl o 150mM NaCl o 1% v/v NP40 o protease inhibitor cocktail A/B Lysis Buffer 2 (RIPA) (ph 8.0) o 50mM Tris-Cl

More information

PRODUCTION AND CHARACTERIZATION OF BT CRY1AC RESISTANCE IN BOLLWORM, HELICOVERPA ZEA (BODDIE) Konasale Jayaramu Anilkumar. Sakuntala Sivasupramaniam

PRODUCTION AND CHARACTERIZATION OF BT CRY1AC RESISTANCE IN BOLLWORM, HELICOVERPA ZEA (BODDIE) Konasale Jayaramu Anilkumar. Sakuntala Sivasupramaniam PRODUCTION AND CHARACTERIZATION OF BT CRY1AC RESISTANCE IN BOLLWORM, HELICOVERPA ZEA (BODDIE) Except where reference is made to the work of others, the work described in this dissertation is my own or

More information

Since its inception in 1984, the

Since its inception in 1984, the on Target Since its inception in 1984, the University of Illinois Insect Management and Insecticide Efficacy Program has provided the producers of Illinois complete and informative evaluations of registered

More information

SPA for quantitative analysis: Lecture 6 Modelling Biological Processes

SPA for quantitative analysis: Lecture 6 Modelling Biological Processes 1/ 223 SPA for quantitative analysis: Lecture 6 Modelling Biological Processes Jane Hillston LFCS, School of Informatics The University of Edinburgh Scotland 7th March 2013 Outline 2/ 223 1 Introduction

More information

Enrichment Media and Kits

Enrichment Media and Kits Enrichment Media and Kits Innovative Biotin/Streptavidin-free Tools for Capturing Azide- or Alkyne-tagged Proteins Enrichment Media and Kits Protein Enrichment Kits Far superior digest purity compared

More information

Lecture 7: Enzymes and Energetics

Lecture 7: Enzymes and Energetics Lecture 7: Enzymes and Energetics I. Biological Background A. Biological work requires energy 1. Energy is the capacity to do work a. Energy is expressed in units of work (kilojoules) or heat energy (kilocalories)

More information

Bicyclic helical peptides as dual inhibitors selective. for Bcl2A1 and Mcl-1 proteins

Bicyclic helical peptides as dual inhibitors selective. for Bcl2A1 and Mcl-1 proteins Supporting Inormation Bicyclic helical peptides as dual inhibitors selective or Bcl2A1 and Mcl-1 proteins de Araujo A.D.; Lim, J.; Wu, K-C.; Xiang, Y.; Good, A. C.; Skerlj, R.; Fairlie, D. P.* Contents

More information

An Introduction to Metabolism

An Introduction to Metabolism CAMPBELL BIOLOGY IN FOCUS Urry Cain Wasserman Minorsky Jackson Reece 6 An Introduction to Metabolism Lecture Presentations by Kathleen Fitzpatrick and Nicole Tunbridge Overview: The Energy of Life The

More information

Free Energy. because H is negative doesn't mean that G will be negative and just because S is positive doesn't mean that G will be negative.

Free Energy. because H is negative doesn't mean that G will be negative and just because S is positive doesn't mean that G will be negative. Biochemistry 462a Bioenergetics Reading - Lehninger Principles, Chapter 14, pp. 485-512 Practice problems - Chapter 14: 2-8, 10, 12, 13; Physical Chemistry extra problems, free energy problems Free Energy

More information

Generation Date: 12/07/2015 Generated By: Tristan Wiley Title: Bio I Winter Packet

Generation Date: 12/07/2015 Generated By: Tristan Wiley Title: Bio I Winter Packet Generation Date: 12/07/2015 Generated By: Tristan Wiley Title: Bio I Winter Packet 1. Many natural ecosystems have been destroyed by human activity. To better manage our remaining natural ecosystems, we

More information