Cellular Electrophysiology and Biophysics

Similar documents
Computational Modeling of the Cardiovascular and Neuronal System

Modeling. EC-Coupling and Contraction

Modeling. EC-Coupling and Contraction

the axons of the nerve meet with the muscle cell.

Lecture 13, 05 October 2004 Chapter 10, Muscle. Vertebrate Physiology ECOL 437 University of Arizona Fall instr: Kevin Bonine t.a.

A Model Based Analysis of Steady-State versus Dynamic Elements in the Relationship between Calcium and Force

Muscle tissue. Types. Functions. Cardiac, Smooth, and Skeletal

PHYSIOLOGY CHAPTER 9 MUSCLE TISSUE Fall 2016

According to the diagram, which of the following is NOT true?

Electrophysiological Modeling of Membranes and Cells

UNIT 6 THE MUSCULAR SYSTEM

The molecular basis of cardiac mechanics: Regulation of motor unit recruitment.

Computer Science Department Technical Report. University of California. Los Angeles, CA

Our patient for the day...

Electrophysiological Modeling of Membranes and Cells

Membrane Potential. 1. Resting membrane potential (RMP): 2. Action Potential (AP):

Fundamentals of Neurosciences. Smooth Muscle. Dr. Kumar Sambamurti 613-SEI; ;

Muscle regulation and Actin Topics: Tropomyosin and Troponin, Actin Assembly, Actin-dependent Movement

Muscles and Muscle Tissue: Part A

BIOMECHANICS 3 Origins and consequences of forces in biological systems

Slide 1. Slide 2. Slide 3. Muscles general information. Muscles - introduction. Microtubule Function

(Be sure to clearly state the principles addressed in your discussion.)

Modelling Muscle Contraction a multiscale approach

TISSUE. A) Types. (i)

Bioelectricity Prof. Mainak Das Department of Biological Sciences, and Bioengineering Indian Institute of Technology, Kanpur.

The Molecules of Movement Musc 1 - Professor Michael Ferenczi

Active contraction of cardiac cells: a reduced model for sarcomere dynamics with cooperative interactions

Simulation Analysis of Cardiac Muscle Isotonic Contractions at Different Pre- and Afterloads

Chapter 16. Cellular Movement: Motility and Contractility. Lectures by Kathleen Fitzpatrick Simon Fraser University Pearson Education, Inc.

Chapter 2 Basic Cardiac Electrophysiology: Excitable Membranes

Introduction to Physiology IV - Calcium Dynamics

Role of the Na -Ca 2 Exchanger as an Alternative Trigger of CICR in Mammalian Cardiac Myocytes

A Mathematical Model for β1-adrenergic Regulation of the Mouse Ventricular Myocyte Contraction

Dynamical Systems for Biology - Excitability

Navigation (Chapter 16)

Lecture 13, 04 Oct 2005 Chapter 16 & 17 Navigation & Muscle Function

Frontiers in CardioVascular Biology

A Dynamic Model of Excitation-Contraction Coupling during Acidosis in Cardiac Ventricular Myocytes

Movement & Muscle. 19 th Lecture Fri 27 Feb Chapter 18. Vertebrate Physiology ECOL 437 (MCB/VetSci 437) Univ. of Arizona, spring 2009

Movement & Muscle Chapter 18

A Metabolite-Sensitive, Thermodynamically Constrained Model of Cardiac Cross-Bridge Cycling: Implications for Force Development during Ischemia

me239 mechanics of the cell - syllabus me239 mechanics of the cell me239 mechanics of the cell - grading me239 mechanics of the cell - overview

A note on discontinuous rate functions for the gate variables in mathematical models of cardiac cells

CIE Biology A-level Topic 15: Control and coordination

Ionic Charge Conservation and Long-Term Steady State in the Luo Rudy Dynamic Cell Model

A Cross-Bridge Model Describing the Mechanoenergetics of Actomyosin Interaction

لجنة الطب البشري رؤية تنير دروب تميزكم

Cardiac mechanoenergetics replicated by cross-bridge model Vendelin, M.; Bovendeerd, P.H.M.; Arts, M.G.J.; Engelbrecht, J.; van Campen, D.H.

Modeling 3-D Calcium Waves from Stochastic Calcium sparks in a Sarcomere Using COMSOL

Relaxation Kinetics Following Sudden Ca 2 Reduction in Single Myofibrils from Skeletal Muscle

thebiotutor.com A2 Biology Unit 5 Responses, Nervous System & Muscles

Calcium dynamics, 7. Calcium pumps. Well mixed concentrations

Spatially explicit, nano-mechanical models of the muscle half-sarcomere: Implications for biomechanical tuning in atrophy and fatigue

Acto-myosin: from muscles to single molecules. Justin Molloy MRC National Institute for Medical Research LONDON

Stiffness-distortion sarcomere model for muscle simulation

The Myogenic Response in Isolated Rat Cerebrovascular Arteries: Smooth Muscle Cell Model

Membrane Physiology. Dr. Hiwa Shafiq Oct-18 1

NOTE: LOOK ON MY WEBSITE FOR THE MUSCLE LABELING POWER POINT/PDF Part I. Identify the parts of the neuron that are labeled below.

Biophysik der Moleküle!

Human Motion Control Course (Wb 2407)

Sarcomere Lattice Geometry Influences Cooperative Myosin Binding in Muscle

Review Article Poorly Understood Aspects of Striated Muscle Contraction

Theeffectofmusclefatigueonthebehaviorofsinglemusclefibre

Lawrence Davis Yates*

Significant Impact on Muscle Mechanics of Small Nonlinearities in Myofilament Elasticity

Lecture Notes 8C120 Inleiding Meten en Modelleren. Cellular electrophysiology: modeling and simulation. Nico Kuijpers

Metabolism: Energy and Enzymes. February 24 th, 2012

me239 mechanics of the cell me239 mechanics of the cell - final projects 4 6 mechanotransduction downloadable layout file from coursework

Advanced Higher Biology. Unit 1- Cells and Proteins 2c) Membrane Proteins

PROPERTY OF ELSEVIER SAMPLE CONTENT - NOT FINAL. The Nervous System and Muscle

Quantitative Electrophysiology

EFFECT OF Ca ION CONCENTRATION ON CROSS- BRIDGE KINETICS IN RABBIT PSOAS FIBERS

Invariant Manifold Reductions for Markovian Ion Channel Dynamics

(pca is -log [Ca2+]) relationships in rabbit skinned psoas muscle fibres at mean

Quantitative Electrophysiology

Solution Authoring Guidelines Version 9.4 September 2016

2013 NSF-CMACS Workshop on Atrial Fibrillation

Mathematical Modeling of the American Lobster Cardiac Muscle Cell: An Investigation of Calcium Ion Permeability and Force of Contractions

Biology Slide 1 of 20

Basic mechanisms of arrhythmogenesis and antiarrhythmia

Nervous System Organization

Excitation of Skeletal Muscle: Neuromuscular Transmission and Excitation-Contraction Coupling

cycle of the isometrically contracting state); bridges; and in both cases, there was an additional

A Thesis. presented to. the Faculty of California Polytechnic State University, San Luis Obispo. In Partial Fulfillment

Membrane Protein Pumps

TABLE OF CONTENTS. Foundations of Chemistry Cells and their Membranes Homeostasis and Inheritance Bones and Joints

significant quantities are also thought to be produced by ATP splitting by the (Received 4 May 1984) length decreases below 2-20,um.

MUSCLE CONTRACTION* M. L. GREASER University of Wisconsin

SECOND PUBLIC EXAMINATION. Honour School of Physics Part C: 4 Year Course. Honour School of Physics and Philosophy Part C C7: BIOLOGICAL PHYSICS

Dynamic Systems: Ordinary Differential Equations. Ordinary Differential Equations

The Journal of Physiology

Automatic Validation and Optimisation of Biological Models

CELL BIOLOGY - CLUTCH CH. 9 - TRANSPORT ACROSS MEMBRANES.

A Spatially Explicit Nanomechanical Model of the Half-Sarcomere: Myofilament Compliance Affects Ca 2+ -Activation

CSD-TR R. Samade, B. Kogan

Chapter 02. Lecture and Animation Outline

Model of Intracellular Calcium Cycling in Ventricular Myocytes

Biomechanics. Soft Tissue Biomechanics

GPU-Enabled Spatiotemporal Model of Stochastic Cardiac Calcium Dynamics and Arrhythmias

MODEL OF CALCIUM MOVEMENTS DURING ACTIVATION

Transcription:

BIOEN 6003 Cellular Electrophysiology and Biophysics Modeling of Force Development in Myocytes II Frank B. Sachse, University of Utah

Overview Experimental Studies Sliding Filament Theory Group work Excitation-Contraction Coupling Modeling of Cellular Force Development Group work Integration with Electrophysiological Models Group work Computational Modeling of the Cardiovascular System - Page 2

Contraction of Myocyte by Electrical Stimulation Microscopic imaging of isolated ventricular cell from guinea pig http://www-ang.kfunigraz.ac.at/ schaffer Computational Modeling of the Cardiovascular System - Page 3

Measurement of Force Development in Single Cell Myocyte clued between glass plates Force transmission to measurement system Stimulator Fluid at body temperature Mechanical Fixation (variable strain) Glass plates Measured force per myocyte: 0.15-6.0 µn Computational Modeling of the Cardiovascular System - Page 4

Measurement Techniques Permeabilization of sarcolemma/skinning of myocytes by saponin or Triton X-100 Direct control of intracellular concentrations of ions, drugs etc. [ Ca 2+ ] = [ Ca 2+ ] i o Transillumination of myocyte or muscle strands with laser light Diffraction pattern ~ sarcomere length Computational Modeling of the Cardiovascular System - Page 5

Sarcomere Length Measurement via Laser Diffraction (Figures from Lecarpentier et al., Real-Time Kinetics of Sarcomere Relaxation by Laser Diffraction, AJP, 1985) Further information: http://muscle.ucsd.edu/musintro/diffraction.shtml Computational Modeling of the Cardiovascular System - Page 6

Force Development: Sliding Filament Theory Cellular force development by sliding myofilaments (Huxley 1957), i.e. actin and myosin, located in sarcomere Attachment of myosin heads to actin Filament sliding Detachment Spanning of myosin heads Computational Modeling of the Cardiovascular System - Page 7

Force Development: Sliding Filament Theory http://www.sci.sdsu.edu/movies/actin_myosin.html Computational Modeling of the Cardiovascular System - Page 8

Actin-Myosin Interaction A Actin M Myosin ADP Adenosine diphosphate ATP Adenosine triphosphate P i Phosphate (modified from Bers, Excitation-Contraction Coupling and Cardiac Contractile Force, 1991) Computational Modeling of the Cardiovascular System - Page 9

Coupling of Electrophysiology and Force Development Rest small Ca 2+ Stimulus Contraction Ca 2+ release from SR high Ca 2+ High concentration of intracellular Ca 2+ Force development Contraction of sarcomere/ cell Computational Modeling of the Cardiovascular System - Page 10

Phases of Force Development A: Actin M: Myosin Z: Z-Disc Begin of contraction Ca release Triggering Relaxation Ca uptake Filling SL: Sarcolemma TTS: Transverse tubule SPR: Sarcoplasmic Reticulum Ca 2+ Release Ca 2+ Uptake Computational Modeling of the Cardiovascular System - Page 11

Calcium Handling and EC-Coupling Transverse Tubule Cell Membrane Sarcoplasmic Reticulum Troponin NCX: Sodium-calcium exchanger ATP: Ionic pump driven by ATP-hydrolysis RyR: Calcium channel (ryanodine receptor) PLB: Phospholamban (modified from Bers, Nature Insight Review Articles, 2002) Computational Modeling of the Cardiovascular System - Page 12

Group Work Which states are important for biophysically detailed modeling of force in myocytes? Which states can be neglected for an efficient model? Computational Modeling of the Cardiovascular System - Page 13

Models of Force Development 1938 Hill Skeletal muscle Frog Huxley Skeletal muscle - - Wong Cardiac muscle - Panerai Papillary muscle Mammalian Peterson, Hunter, Berman Papillary muscle Rabbit Landesberg, Sideman Skinned cardiac - myocytes Hunter, Nash, Sands Cardiac Muscle Mammalian Noble, Varghese, Kohl, Noble Ventricular Muscle Guinea pig Rice, Winslow, Hunter Papillary muscle Guinea pig Rice, Jafri, Winslow Cardiac muscle Ferret today Glänzel, Sachse, Seemann Ventricular myocytes Human Computational Modeling of the Cardiovascular System - Page 14

Mathematical Modeling of Myofilament Sliding (Huxley) A + M f g A M A + M: Anzahl Number von of myosins bzgl. Actin not ungekoppeltem bound to actin Myosin A M: Anzahl Number Querbrücken of myosins bound (Actin/ to Myosin actin gekoppelt) f,g: Ratenkonstanten constants for für binding Bindung and bzw. unbinding Ablösung d [ A M] ( [ ] [ A M] ) g[ A M] = f Max A M dt Max[ A M]: Maximale number Anzahl of an myosin Querbrücken proteins bound to actin filament Computational Modeling of the Cardiovascular System - Page 15

Modeling of Cellular Force Development [Ca] i /µm F/F maxi t [s] Intracellular concentration of calcium Calculated with electrophysiological cell models System of coupled ordinary differential equations t [s] Processes in myofilaments State of troponins, tropomyosins and cross bridges System of coupled ordinary differential equations t [s] Force Development Computational Modeling of the Cardiovascular System - Page 16

4-State Model of Force Development: State Diagram N0 g N1 Force k l (Ca i ) k -1 (Ca i ) k m (Ca i ) k m (Ca i ) T0 Ca bound f g T1 Ca bound Force Description by set of 1st order ODEs Transfer of states N0, N1, T0, and T1 is dependent of rate coefficients Some rate coefficients are a function of intracellular calcium [Ca 2+ ] i (Model 1 of Rice 1999 et al./ Landesberg et al.1994) Computational Modeling of the Cardiovascular System - Page 17

4-State Model of Force Development Several states contribute to force development: F = α F : T1+ N1 F max Normalized force [N/N] F max : Maximal simulated force α : Myofilament overlap function Force is dependent on overlap of actin and myosin filaments. Frank-Starling Mechanism Force ~ initial length Diastolic volume ~ cardiac output α Computational Modeling of the Cardiovascular System - Page 18

4-State Model of Force Development: Matrix Notation # % t % % $ N 0 T 0 T 1 N 1 & # ( % ( = % ( % ' $ K l k l 0 g 0 + g 1 V K l f k l g 0 + g 1 V 0 0 f g 0 g 1 V k l K l 0 0 k l g 0 g 1 V K l &# (% (% (% ' $ N 0 T 0 T 1 N 1 & ( ( ( ' Ca i T0 T1 Transfer Rate constants: coefficients: K l,k l, f, g 0, g 1,k l und V States of Troponin Calcium Cross bridges N 0 unbound weak T 0 bound weak T 1 bound strong N 1 unbound strong t [s] Numerical solution e.g. with Euler- and Runge-Kutta-methods Computational Modeling of the Cardiovascular System - Page 19

Group Work Why is modeling of cellular contraction and modeling of ion channels conceptually similar? What are the differences? Computational Modeling of the Cardiovascular System - Page 20

State Diagram of 3rd Model of Rice 1999 et al. States of Troponin States of Tropomyosin and cross bridges T unbound N0 0 XB g N1 1 XB k on k off k 1 (TCa,SL) k -1 k -1 k 1 (TCa,SL) TCa bound P0 Permissive 0 XB f g P1 Permissive 1 XB Computational Modeling of the Cardiovascular System - Page 21

Matrix representation of State Diagram y =! T $ # & " TCa% # y = k on[ca] % $ k on [Ca] k off k off & ( y ' States of Troponin Transitions x =! # # # " N 0 P 0 P 1 N 1 $ & & & % x ( ) 0 g ( ) f g 0 ( ) k 1 ( ) g k 1 $ k 1 k 1 TCa,SL & & k 1 k 1 TCa,SL = & & 0 f g k 1 TCa,SL & % 0 0 k 1 TCa,SL ' ) ) ) x ) ) ( States of Tropomyosin and cross bridges Transitions Model 3 from Rice et al., 1999 Computational Modeling of the Cardiovascular System - Page 22

Force Development for Different Static Sarcomere Lengths (SL) Force normalized with maximal force [N/N] time [s] Computational Modeling of the Cardiovascular System - Page 23

Model of Glänzel et al. 2002: Activation [Ca] I, λ, XB T TCa TCa, TM on TM off TM on T TCa Troponin Troponin with bound calcium TM off Tropomyosin in nonpermissive state TM on Tropomyosin in permissive state λ Stretch XB Cross-bridges [Ca] I Free calcium in intracellular fluid Ca-binding to Troponin C Shifting of Tropomyosin (Glänzel, Diploma Thesis, IBT, Universität Karlsruhe (TH), 2002, Sachse et al, IJBC, 2003, Sachse et al, LNCS 2674, 2003) Cooperativity mechanisms XB-TN TM-TM Computational Modeling of the Cardiovascular System - Page 24

Model of Glänzel et al. 2002: Crossbridge Cycling v M ATP A M ATP v M v A M v A M ADP A Actin M Myosin ATP Adenosine triphospate ADP Adenosine diphosphate P i Phosphate λ Stretch v Velocity of filaments XB Cross-bridges weakly coupled strong binding M ADP P i v M ADP v A M ADP Cooperativity mechanism v A M ADP P i A M ADP P i XB-XB ΤΜ ον, λ, XB Computational Modeling of the Cardiovascular System - Page 25

Reconstruction of Static Measurements Study Species: rat Ventricular myocytes Resting length ~ 2µm Protocol Calcium concentration constant Stretch constant Normalized Force [N/N] Normalized Force [N/N] Calcium concentration [µm] Measurement ter Keurs et al. 00 Normalized Force [N/N] Normalized Force [N/N] Calcium concentration [µm] Model of Glänzel et al. 02 Calcium concentration [µm] Calcium concentration [µm] Model Peterson et al. 91 3rd model Rice et al. 99 Computational Modeling of the Cardiovascular System - Page 26

Reconstruction of Length Switch Experiments Study Species: rabbit Ventricular myocytes Length Switch Experiment Stretch of 4.6% in 10 ms Return to original configuration in 10 ms Measurement Peterson et al. 91 Normalized Force [N/N] Normalized Force [N/N] Normalized Force [N/N] t [s] Model of Glänzel et al. 02 t [s] t [s] Model Peterson et al. 91 3rd model Rice et al. 99 Computational Modeling of the Cardiovascular System - Page 27

Coupling of Force with Electrophysiological Models: Basics Noble-Varghese-Kohl-Noble model Rice-Winslow-Hunter model 1st Stimulus at t=35 ms Sarcomere stretch λ Computational Modeling of the Cardiovascular System - Page 28

Coupling of Force with Electrophysiological Models Luo-Rudy model (Guinea pig ventricular) Rice-Winslow-Hunter model 3rd (rabbit ventricular) Stimulus at t=35 ms Sarcomere stretch λ Species don t fit Computational Modeling of the Cardiovascular System - Page 29

Coupling of Force with Electrophysiological Models Noble-Varghese-Kohl-Noble model (Guinea pig ventricular) Rice-Winslow-Hunter model 3rd (rabbit ventricular) Stimulus at t=35 ms Sarcomere stretch λ Differences in force development due to differences of Ca transient Computational Modeling of the Cardiovascular System - Page 30

Coupling of Force with Electrophysiological Model: Human Priebe-Beuckelmann model (human ventricular) Glänzel-Sachse-Seemann model (human ventricular) Stimulus at t=35 ms with frequency Sarcomere stretch λ Validation with measured data necessary! Computational Modeling of the Cardiovascular System - Page 31

Group Work Discuss the integration of electrophysiological models with models of cellular force development. When are two models compatible? What other models will be required to reconstruct cellular contraction? Computational Modeling of the Cardiovascular System - Page 32

Summary Experimental Studies Sliding Filament Theory Excitation-Contraction Coupling Modeling of Cellular Force Development Integration with Electrophysiological Models Computational Modeling of the Cardiovascular System - Page 33