Electronic Supplementary Information Multilayered Shell SERS Nanotags with Highly Uniform Single-Particle Raman

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Electronic Supplementary Information Multilayered Shell SERS Nanotags with Highly Uniform Single-Particle Raman Readout for Ultrasensitive Immunoassays Renyong Liu, ianhua Liu, Guijian Guan, Changlong Jiang and Zhongping Zhang Institute of Intelligent Machines, Chinese cademy of Sciences, Hefei, nhui 2331, China. E-mail: zpzhang@iim.ac.cn EXPERIMENTL SECTION Chemicals and Materials. Human carcinoembryonic antigen (CE), alpha fetoprotein (FP), carbohydrate antigen 125 (C 125) and the matched pairs of monoclonal antibodies mouse anti-human CE (ML1C1) and CE (ML1C2), mouse anti-human FP (11) and FP (12), mouse anti-human C 125 (X36) and C 125 (X52) were purchased from Shanghai Linc-io Science Co., Ltd. Normal human serum was purchased from eijing iosynthesis iotechnology Co., Ltd. 4-aminobenzenethiol (4-T), 3-methoxybenzenethiol (3-MeOT), 2-methoxybenzenethiol (2-MeOT), 2-naphthalenethiol (2-NT) (from Sigma-ldrich) were chosen as Raman tag molecules. ovine serum albumin (S), poly(ethyleneimine) (PEI, Mw 25) and sodium borohydride (NaH 4 ) were obtained from Sigma-ldrich. Tetraethylorthosilicate (TEOS), ammonium hydroxide (25%), silver nitrate (gno 3 ), poly(vinylpyrrolidone) (PVP, Mw 4), trisodium citrate (C 6 H 5 O 7 Na 3 2H 2 O), Tween-2, glutaraldehyde (G) and ethanol were purchased from Shanghai Chemicals Ltd..1 M phosphate-buffered saline (PS, PH 7.4) solution was prepared by adding 1.22 g of K 2 HPO 4,.136 g KH 2 PO 4, and.85 g of NaCl in 1 ml of ultrapure water. The clinical serum samples were gifted from the Second ffiliated Hospital of nhui Medical University, China. S1

LL ssembly of gnps at SiO 2 Particles. 12-nm gnps were synthesized in an aqueous solution by reducing gno 3 with NaH 4 in the presence of PVP and C 6 H 5 O 7 Na 3, 1 and uniform SiO 2 particles with a size of ~3 nm were prepared according to the Stöber method. 2 SiO 2 particles were first coated with PEI by suspended in 2 mg/ml positively charged PEI solution (containing.5 M NaCl). fter centrifuged and washed with pure water, the PEI-coated SiO 2 particles were dispersed into gnps colloid and the mixture was stirred for 15 min. The particles attaching gnps at polyelectrolyte layer were separated and again dispersed in gnps colloid. fter repeating four times, a dense layer of gnps was formed at the PEI layer. The SiO 2 particles were again suspended in the PEI solution for the formation of PEI electrolyte at the gnps layer. The assembled procedure was repeated until the desired number of bilayers was reached. Preparation of SERS Nanotags and Conjugation of ntibody. 4-T, 3-MeOT, 2-MeOT and 2-NT were chosen as Raman tag molecules. 25 mg of multilayer-coated silica particles were separately suspended in 5 ml of ethanol solution containing 1 mm above molecules and incubated for 3 min at room temperature, which led to the permeation of tag molecules into the interlayers of the hybrid shell by the interactions with gnps. fter centrifuged and washed with ethanol several times, the particles with different Raman tags were then suspended in 2.5% G and shaken for 1 h at room temperature, in which the crosslinking reaction occurred between G and amino groups of PEI layers. The nanotags with different Raman tags were thus produced. Subsequently, the antibody targeting to a specific analyte was further linked onto the surface of nanotags by the conjugation reaction with residual aldehyde groups. Typically, 125 μg of detection antibody in PS buffer was S2

added into the nanotag suspension and the mixture was incubated for 1 h at room temperature. The antibody-modified nanotags were further suspended in 1% S and shaken for 1 h at 37 ºC and then washed three times with.5% Tween-2. The SERS nanotags with the ability of biological recognition for the immunoassay were finally obtained and dispersed in PS with a final concentration of 25 mg/ml and stored at 4 ºC in a refrigerator. Preparation of Paramagnetic Particles and Modification of ntibody. The paramagnetic Fe 3 O 4 particles and core-shell Fe 3 O 4 @SiO 2 particles were prepared according to the previously reported method. 3 15 mg of the core-shell Fe 3 O 4 @SiO 2 particles were first dispersed in 2 mg/ml PEI solution (containing.5 M NaCl). fter centrifuged and washed with pure water, the PEI layer adsorbed at the SiO 2 shell was crosslinked by suspending the particles in 2.5% aqueous G under shaking for 1 h at room temperature. The obtained particles were washed with PS and isolated using a magnetic field, followed by the addition of 75 μg of capture antibody in PS buffer for 1 h at room temperature. Under shaking, the capture antibody was chemically immobilized onto the PEI layer through the reaction with residual aldehyde groups. The products were thoroughly washed with.5% Tween-2, blocked with 1% S, dispersed in PS buffer with a final concentration of 25 mg/ml and stored in a refrigerator prior to use. Immunoassay Protocol. 1:1 mixture of normal human serum and PS buffer was used as the incubation solution for the SERS-based immunoassay. ntigen standard solutions were prepared by adding different amounts of antigens into the incubation solution. For each assay, 5 μl of antigen standard solutions at various concentrations were mixed with 5 μl of antibody-modified magnetic particles (25 mg/ml) and allowed to react for 1 h at 37 ºC. fter S3

isolation and washing three times with PS, the immunocomplexes were further reacted with 1 μl of SERS nanotags (25 mg/ml) for 1 h at 37 ºC. The sandwich-type immunocomplexes were separated under a magnetic field and washed three times with PS buffer and redispersed in PS buffer. The solution was sucked into a capillary tube and the sandwich-type immunocomplexes were then collected at one spot using an external magnetic field. The Raman spectra were recorded from this site. Characterization and Instruments. The shape and structure of the particles were examined by FEI Sirion-2 field emission scanning electron microscopy (SEM) and JEOL 21 transmission electron microscopy (TEM) operated at 2 kv accelerating voltage. UV-vis absorption spectra were recorded with a Shimadzu UV-255 spectrometer. Single-particle light scattering images and Raman spectra were recorded on a silicon substrate using the DXR confocal microscopy Raman system (Thermo Fisher Scientific Inc.) equipped with a dark-field illumination. Raman spectra were collected with a 532-nm excitation laser and 5-μm slit for confocality. The laser power and accumulation time were 1 mw and 1 s, respectively. Raman measurements of single particles on the silicon substrate and SERS nanotags in solution were performed with 5 and 1 objective lens, respectively. Calculation of Enhancement Factor (EF). The EF values of the single SiO 2 @(gnps/pei) n particles to 4-T were calculated by using the following equation: EF I I SERS bulk / N / N SERS bulk where I SERS and I bulk represent the intensities of the peak at 1434 cm -1 from single SiO 2 @(gnps/pei) n particles and solid powder, respectively. N SERS is the number of molecules adsorbed on the (gnps/pei) n layers, which is determined by measuring the S4

difference between the total 4-T amount and the residual amount in solution. s for SiO 2 @(gnps/pei) 5 particles, we used 5 ml 5 1-6 M of 4-T to label the particles in the EF calculation. The total number of tag molecules is 1.5 1 16. In our case, the Raman tag molecules with thiol group can strongly bind to gnps and can hardly adsorb onto other surfaces such as the hydrophilic glassware. fter the incubation for 3 min, the tag molecules were not found in the residual solution by UV-vis spectral measurements, so it can be supposed that at least 95% of molecules were adsorbed into the hybrid shells. The number of SiO 2 @(gnps/pei) 5 particles in solution is about 9.5 1 11, so N SERS can be calculated to be about 15,. N bulk is the molecule number of the neat 4-T in the laser illumination volume. We employed 532-nm laser and focused through objective lens (5, N =.5) to reduce instrumental noise. ssuming that the excitation volume as a cylinder, the diameter (d) and the height (h) were determined by the following equations: 4 d = 1.22 laser N h = 2.2n laser (N) 2 where n is the refractive index of 4-T (n 1.6). N bulk can be calculated to be about 1.7 1 1. The EFs of individual SiO 2 @(gnps/pei) 5 nanotags distributed in a very narrow range of 1.1 1 7 ~2.5 1 7 were obtained. References for Electronic Supplementary Information 1 Y. G. Sun,. Mayers and Y. N. Xia, Nano Lett., 23, 3, 675. 2 W. Stöber,. Finker and E. ohn, J. Colloid Interface Sci., 1968, 26, 62. 3 Y. H. Deng, D. W. Qi, C. H. Deng, X. M. Zhang and D. Y. Zhao, J. m. Chem. Soc., 28, 13, 28. 4 W. R. Zhang, C. Lowe and R. Smith, Progress in Organic Coatings, 29, 66, 141. S5

SiO2 (3) repeat (1) PEI (2) (1), (2) (4) gnp Raman reporter ntibody (5) crosslinkage with G (6) antibody conjugation Fig. S1 Procedure for the assembly of SERS nanotags: (1) the coating of PEI at silica particles, (2) the assembly of gnps onto the PEI layer, (3) the alternate assembly of PEI and gnps onto the silica particles, (4) the incorporation of Raman tags, (5) the crosslinkage of interlayers using glutaraldehyde (G) and (6) the conjugation of antibodies. 2 nm C 2 nm D 2 nm 2 nm Fig. S2 The evolution of the multilayered structure of gnps. () TEM images of SiO2 particles. (-D) TEM images of SiO2@(gNPs/PEI)n particles with n = 1, 3 and 5. S6

2 15 1 5 5 3 1 gnps 12 8 4 9 12 15 18 g 1 3 5 Fig. S3 Comparison of Raman signal intensity as a function of the number of assembled layers in solution. () SERS spectra of 4-T in original gnps and SiO 2 @(gnps/pei) n particles with n = 1, 3 and 5. () The comparison of corresponding SERS intensity at 1434 cm -1. The concentration of 4-T (1 mm) in colloidal gnps was the same as that used in the preparation of nanotags. 8 6 4 2 5 3 1 8 1 12 14 16 18 Fig. S4 SERS spectra of 4-T from SiO 2 @(gnps/pei) n particles with n = 1, 3 and 5. The SERS particles with different layer number were individually incubated with very low number of moles of 4-T (.1 nmol). In this case, the surface of gnps was far from the saturation by molecules. S7

16 1434 992 139 138 12 8 4 1 3 5 7 1 2 3 Time (days) Fig. S5 The stability of the SERS nanotags. The Raman intensities of the represented peaks (1434, 992, 139 and 138 cm -1, respectively) of nanotag-(4-t), (3-MeOT), -(2-MeOT) and -(2-NT) kept almost identical after they were suspended in water for one month. Fig. S6 The characterization of superparamagnetic particles. () SEM image of the prepared Fe 3 O 4 @SiO 2 particles. () Magnetization curve of the prepared Fe 3 O 4 @SiO 2 particles. The saturation magnetization value was 78 emu/g. The inset photographs were of the suspension assay before and after magnetic separation. The color of solution changed into transparent from black after the particles were highly concentrated under an external field. S8

1 5 8 4 I CE / I blank 6 4 I CE / I blank 3 2 2 R 2 =.994-13 -12-11 -1-9 -8-7 Log [CE(g/mL)] 1-13 -12-11 -1-9 Log [CE(g/mL)] Fig. S7 The Raman intensity plots for the detection of CE. () The Raman intensity ratio (I CE /I blank ) of 4-T at 1434 cm -1 with the logarithm of CE concentrations. () The linear correlation of Raman intensity (at 1434 cm -1 ) with the logarithm of CE concentrations from.1 pg/ml to 1. ng/ml. The linear regression equation is y =.724x +1.8 (R 2 =.994). 8 6 4 2 blank C125 FP CE Fig. S8 The selectivity of the immunoassay of CE (1 ng/ml ) to FP (1 ng/ml) and C125 (1 U/mL). The SERS intensity of the peak at 1434 cm -1 was used for the evaluation of Raman readout. It can be seen that the Raman readouts are similar to that of the blank sample, revealing the high selectivity of this immunoassay method. S9

2 1 2 3 Clinical blood samples 16 12 8 4 Sample 1 Sample 2 Sample 3 8 1 12 14 16 18 Fig. S9 The real detection of clinical blood samples with nanotag-(4-t). () The photograph of the three patient blood samples. () The corresponding SERS spectra obtained by nanotag-based immunoassay method after diluted by 1, 1 and 1 times with PS for sample 1, 2 and 3, respectively. ll blood samples were handled in accordance with approved Institutional Review oard (IR) protocols at the Second ffiliated Hospital of nhui Medical University, China. Peripheral venous blood was collected into the serum separation tube and allowed to clot at room temperature for 3 minutes. fter centrifuged at 2 g for 15 minutes, the serum was separated and stored at -8 ºC before analysis. Table S1. Real detection and recovery test of CE in clinical serum samples. Sample No. Referenced ECLI method (ng/ml) a Proposed SERS method (ng/ml) b Spiked CE (ng/ml) Measured CE (ng/ml) Recovery (%) 1 3.5.39.1.51 14.8 2 3.9.34.1.38 86.36 3 183.6.16.1.25 96.15 a The data represent natural CE levels in the three clinical serum samples detected by the standard electrochemiluminescent immunoassay (ECLI) method in clinical diagnostics. b The data represent the CE concentrations in the three clinical serum samples obtained by SERS nanotag-based immunoassay method after 1, 1 and 1 times dilution with PS for sample 1, 2 and 3, respectively. S1

4 2 32 24 16 8 Nanotag-(3-MeOT) 992 Nanotag-(2-MeOT) 139 Nanotag-(2-NT) 138 15 1 5 1:1: 1::1 :1:1 1:1:1 6 9 12 15 18 6 8 1 12 14 16 18 Fig. S1 () SERS spectra of nanotag-(3-meot), -(2-MeOT) and -(2-NT). The three strong peaks of the nanotags appeared at 992, 139 and 138 cm -1, respectively. () SERS spectra of a ternary mixture of nanotag-(3-meot), -(2-MeOT) and -(2-NT) with different concentration ratios. The existence of each nanotag in the mixture could clearly be indicated by the resolved peaks, as noted with red lines. 2 2 g f e d c b a 95 1 15 a b c d e f g Raman Intensity of 992 cm -1 15 1 5 (b) (a) -2-1 1 2 Log ([CE]/[FP]) 15 1 5 Raman Intensity of 139 cm -1 Fig. S11 () SERS spectra from different ratios of CE and FP in human serum: (a) :1; (b) 1:1; (c) 1:1; (d) 1:1; (e) 1:1; (f) 1:1; (g) 1:. () The corresponding Raman intensity at 992 cm -1 (a) and 139 cm -1 (b) versus the logarithmic ratio of CE and FP. The above results show that the intensity of each peak exhibits a very good linear behavior versus the corresponding analyte concentrations. S11

12 3 1 8 6 4 2 a b c d e f 1 12 14 24 18 12 6 a 992 139 138 b c d e f Fig. S12 () SERS nanotag immunoassays of CE, FP and C 125 in six human serum samples with different concentration ratios, respectivley: (a) 1. ng/ml,.1 ng/ml,.1 U/mL; (b) 1. ng/ml,.1 ng/ml,.1 U/mL; (c).1 ng/ml, 1. ng/ml,.1 U/mL; (d).1 ng/ml,.1 ng/ml, 1. U/mL; (e).1 ng/ml, 1. ng/ml,.1 U/mL; (f).1 ng/ml,.1 ng/ml, 1. U/mL. () The bar graphs of the corresponding Raman intensity at 992, 139 and 138 cm -1. S12