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Supporting Information Polarization-dependent Surface Enhanced Raman Scattering Activity of Anisotropic Plasmonic Nanorattles Keng-Ku Liu, Sirimuvva Tadepalli, Gayatri Kumari, Progna Banerjee, Limei Tian, Prashant K. Jain * and Srikanth Singamaneni *. Department of Mechanical Engineering and Materials Science, Institute of Materials Science and Engineering, Washington University in St. Louis, St Louis, Missouri 63130, USA. Department of Chemistry, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA. Department of Physics, University of Illinois at Urbana Champaign, Urbana, Illinois 61801, USA *To whom correspondence should be addressed: Phone: +1 314-935-5407. E-mail: singamaneni@wustl.edu (SS) Phone: +1 217-333-3417. E-mail: jain@illinois.edu (PKJ) S1

SERS intensity Raman intensity 1100 1200 1300 1400 1500 1600 Raman shift (cm -1 ) Figure S1. Raman spectrum of bulk 2-NT. 200 counts Au nanorattles AuNR@Ag 1100 1200 1300 1400 1500 1600 Raman shift (cm -1 ) Figure S2. Surface enhanced Raman scattering (SERS) spectra collected from 2-NT adsorbed on Au nanorattles and AuNR@Ag nanocuboids in aqueous media using 785 nm laser excitation. S2

SERS intensity 2000 counts Au nanorattles AuNR@Ag 1100 1200 1300 1400 1500 1600 Raman shift (cm -1 ) Figure S3. SERS spectra collected from 2-NT adsorbed on Au nanorattles and AuNR@Ag nanocuboids in aqueous media using 514.5 nm laser excitation. Figure S4. DDA simulated extinction spectra of AuNR@Ag nanocuboids in water (black) and on a Si substrate in air (red). Inset shows schematic of the nanostructure with dimensions. Data points obtained from calculation are connected by a spline curve. S3

A B 1 2 1 2 3 3 2 µm C 1 2 3 1 µm Figure S5. (A) Dark-field optical image of Au nanorattles adsorbed on a silicon substrate. Labels 1, 2 and 3 each identify a representative Au nanorattle for polarization-dependent SERS measurement. (B) SEM image of Au nanorattles adsorbed on a silicon substrate from the region marked by the white dashed box in (A). (C) Enlarged SEM image clearly identifying the three representative Au nanorattles from (B). S4

A 1 2 3 B 1 2 3 4 4 6 5 6 5 2 µm C 1 2 3 4 5 6 1 µm S5

Figure S6. (A) Dark-field optical image of AuNR@Ag nanocuboids adsorbed on a silicon substrate. Labels 1-6 each identify a representative AuNR@Ag nanocuboid for polarization-dependent SERS measurement. (B) SEM image of AuNR@Ag nanocuboids adsorbed on a silicon substrate from the entire region shown in (A). (C) Enlarged SEM image clearly identifying the six representative AuNR@Ag nanocuboids from (B). S6

Normalized SERS intensity SERS intensity (counts) 2400 2000 1600 1200 800 400 0 1066 cm -1 1381 cm -1 1 2 3 4 5 6 7 8 9 10 Number of measurement Figure S7. Stability of SERS signal at 1066 cm -1 and 1381 cm -1 peaks obtained from an individual Au nanorattle at a polarization angle of 0. 1.2 1.0 0.8 0.6 0.4 0.2 0.0-90 -60-30 0 30 60 90 Angle (degree) Figure S8. Normalized SERS intensity (at the 1381 cm -1 peak) of an individual Au nanorattle as a function of polarization angle. The blue line is a fit to the cos 2 function. The error bars represent the standard deviation of five identical measurements performed at each polarization angle. S7

Figure S9. Finite-difference time-domain (FDTD) simulations showing the electric field distribution around a AuNR@Ag nanocuboid under various incident polarization angles using 880 nm excitation wavelength. The incident polarization angle is 0, 15, 30, 45, 60, 75 and 90 in (i)-(vii) respectively. Figure S10. FDTD simulations showing the electric field distribution around an Au nanorattle under various incident polarization angles using 880 nm excitation wavelength. The incident polarization angle is 0, 15, 30, 45, 60,75 and 90 in (i)-(vii) respectively. S8

The SERS enhancement factor (EF) for each Au nanostructure was calculated by using the equation 1,2 : EF = I SERS NSERS I bulk Nbulk where I SERS and I bulk are intensities of the same Raman band in the SERS and bulk spectra, N SERS is the number of the 2-napthalnethiol molecules bound to the surface of the Au nanostructure and N bulk is the number of the 2-napthalnethiol molecules in the excitation volume. For the Au nanorattle, I SERS is ~1545 counts and I bulk is ~125 counts. A Raman spectrum of 2-napthalnethiol in the bulk was collected using a 20x microscopy objective with a numerical aperture (NA) of 0.4. The approximate laser spot size with the 20x objective was obtained using the following expression: (1) ω 0 = 4λ πna (2) where ω 0 is the minimum waist diameter for a laser beam of a wavelength λ focused by an objective with a numerical aperture NA. So for the 20x objective, ω 0 = (4)(0.785) π(0.4) z 0 = 2πω 0 2 λ = 2π(2.5)2 0.785 = 2.5 µm. = 50 µm So, the focal volume (τ) = ( π 2 )1.5 ω 0 2 z 0 = ( π 2 )1.5 2.5 2 50 = 614.75 µm 2. Density of the 2-napthalnethiol is 1.55 g cm 3 and the molecular mass of 2-napthalnethiol is 160.24 (g/mol). Therefore, N bulk = (1.55g/cm3 )(614.75µm 3 ) 160.24 (g/mol) = 5.95 10 12 mol The volume of an individual Au nanorattle with edge dimension of 89.3 x 60.6 x 60.6 nm and a AuNR core with length of 49.9 nm and width of 14.4 nm is estimated to be (89.3 13)(60.6 13) 2 [π(7.2) 2 35.5 + 4 3 π (7.2)3 ] = 165533.3 nm 3 N SERS = (1.55g/cm3 ) 165533.3nm 3 160.24 EF = I SERS NSERS I bulk Nbulk = 1545 1.60 10 18 125 5.95 10 12 = 1.60 10 18 mol = 4.60 10 7 S9

Supporting Information References: 1. Itoh, T.; Iga, M.; Tamaru, H.; Yoshida, K.-i.; Biju, V.; Ishikawa, M., Quantitative evaluation of blinking in surface enhanced resonance Raman scattering and fluorescence by electromagnetic mechanism. The Journal of Chemical Physics 2012, 136 (2), 024703. 2. Tian, L.; Gandra, N.; Singamaneni, S., Monitoring controlled release of payload from gold nanocages using surface enhanced Raman scattering. ACS Nano 2013, 7 (5), 4252-4260. S10