Neurite initiation. Neurite formation begins with a bud that sprouts from the cell body. One or several neurites can sprout at a time.

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Neurite initiation. Neuronal maturation initiation f-actin polarization and maturation tubulin stage 1: "spherical" neuron stage 2: neurons extend several neurites stage 3: one neurite accelerates its growth rate and matures to form the axon. stage 4: dendrites begin to elongate and branch stage 5: synaptogenesis Neurite formation begins with a bud that sprouts from the cell body. One or several neurites can sprout at a time. 1

Neurite initiation. Time lapse imaging of neurite initiation The formation of actin-based filopodia is the first step in neurite initiation Dent et al. (2007) neuron 2

25 nm Actin filaments (F-actin) Polymers of actin monomers (globular (g) actin) Have intrinsic polarity: monomers add onto barbed (+) end and depolymerize from pointed (-) end. Polarity important in organizing networks & transport Polymerization requires bound ATP (actin is an ATPase) Actin polymerization uses ~50% of the ATP in neurons (Bernstein and Bamburg (2003)) Microtubules polymers of tubulin dimers Have intrinsic polarity - important in transport Polymerization requires GTP bound to tubulin dimers Plus ends alternate between states of growing and resting. Minus ends depolymerize catastrophe = "peeling apart" of filament strands A critical step in neurite initiation is the establishment of an axis of microtubule orientation and transport Symmetry of perikaryon The symmetry is broken! Microtubules enter the neurite bud. F-actin Microtubules 3

Microtubules break the sphere and drive neurite initiation Ena/VASP KO mutant lacking filopodia F-actin microtubules mmvvee=mena/vasp/evl triple ko Dent et al. (2007) Nature Neuroscience 9(12):1347. Over expression of EGFP-Map2c induces neurite formation in Neuro2A cells Dehmelt J Neurosci. 2003 Oct 22;23(29):9479-90. 4

Functions of actin filaments in neurons Provide structural integrity to filopodia and dendritic spines Regulate organization of membrane proteins and associated protein complexes Polymerization drives protrusion of filopodia and lamellipodia Substrate for intracellular transport Involved in targeting of neuronal components Transmission of mechanical force Involved in synaptic endocytosis & exocytosis Actin-binding proteins capping protein cofilin Ena/VASP ERMs Regulate actin polymerization and organization Functional outcome depends on localization relative concentration of other regulatory proteins profilin fascin myosin filamin Arp2/3 5

Mechanisms of actin nucleation Trimer formation is rate-limiting step Addition of monomers at (+) end Formation of branches and new (+) end Side binding and stabilizing monomers and new (+) end Regulation of Arp2/3: Activation receptor activation intracellular signal Nucleation promoting factor (NPF) activation Inhibiting factor Arp2/3 activation actin branching 6

Regulation of cofilin activity Rho, Rac & cdc42: collapse vs. extension GTP Exchange Factor * = kinase * GTPase Activating Protein * * * an activation/inhibition step may be 1:1 or can amplify the signal 7

Actin based motors: myosins Each myosin molecule: binds/moves on a single filament moves in only one direction on the filament (most myosins move toward the (+) end, myosin VI moves toward (-) end) BUT, the outcome of the motor activity depends on motor and cargo anchoring cytoskeletal orientation cargo tail = cargo binding myosin head = motor domain Regulation of myosin activity Myosin light chain (MLC) regulates myosin movement (in non-muscle myosins) Phosphorylation of MLC at ser19 leads to increased myosin activity (i.e. movement along actin filament) MLC kinase (MLCK) is activated by binding to the Ca+2-calmodulin complex. Phosphorylation of MLC Kinase by Pak (downstream of Rac/cdc42) reduces PLCK activity, thus reducing MLC activity Phosphorylation of MLC Phosphatase by Rho Kinase reduces PLCP activity, thus increasing MLC activity & contraction 8

Microtubules in axons and dendrites Axons have MTs with (+) end distal Dendrites have mixed polarity MTs Required for movement of nucleus during cell migration Provide structural rigidity to axons and dendrites Major substrate for long distance transport Important for targeting of neuronal organelles metabolites Microtubule Associated Proteins (MAPs) http://reasonandscience.heavenforum.org/t2096-the-astonishing-language-written-on-microtubules-amazing-evidence-of-design 9

Microtubule based motors - + Can move either the cargo or the MT depends on which is more anchored Microtubule dynamics can be visualized using EB3-EGFP "comets" Sarah Wanner 10

Using GFP-EB1 to characterize mixed dendritic microtubule organization in vitro, ex vivo, and in vivo. Kah Wai Yau et al. J. Neurosci. 2016;36:1071-1085 2016 by Society for Neuroscience Neurite formation requires tension Local application of tension to the (external) edge of a cell soma can induce neurite formation, suggesting that local (internal) tensions generated in the actin cortex may promote neurite formation. source of tension: internal- push external - pull requires coupling (adhesion) cytoskeleton-membrane membrane-substrate Fass & Odde (2003) Biophys 85(1):623-36 11

Cell Adhesion Molecules (CAMs) can be involved in cell-cell adhesion cell-substrate adhesion are physically inked to the cytoskeleton (usually to f-actin) "engagement" of a CAM triggers intracellular signaling events CAM di/oligomerization will affect ligand binding and intracellular linkage Adhesion dynamic can be visualized using Interference Reflection Microscopy (IRM) darker = more adherent 12

Neurite initiation. Adhesion patterns depend on substrate Cellular adhesions to in vitro surfaces are seen with interference reflection microscopy, appearing as discrete dark regions beneath the cell membrane. Membrane protrusion is coupled to retrograde flow 13

Neurite initiation. Retrograde flow During membrane protrusion, filamentous actin at the leading edge of the cell undergoes continuous retrograde flow movie of fluorescently labeled actin Retrograde flow stops, and filopodia protrusion is enhanced, when the force is applied via adhesion to the cell surface A sticky bead places on the cell surface moves retrograde (left). If the bead is retrained with a laser trap (right), filopodia anterograde to the bead are able to protrude/ extend. Actin retrograde flow requires myosin II activity and is blocked by application of the myosin inhibitor BDM Meideros et al (2006) Nat. Cell Biol Lin et al (1997) Biol Bull Lin et al (1996) Neuron The Clutch hypothesis Filopodial protrusion is driven by actin assembly at the filopodial tip A clutch mechanism holds the F-actin linked to the substratum. When the clutch is not engaged, retrograde flow, powered by myosin II, pulls F-actin back. When the clutch is engaged, actin polymerization leads to protrusion and movement by other motors brings material (e.g., microtubules, membrane, actin monomers) toward the leading edge. Different myosin motors are involved in these movements in different directions. 14

The roles of myosin II in substrate adhesion and retrograde flow are distinct and substrate dependent Effect of myosin II inhibition retrograde flow reduced adhesion reduced actin polymerization not sufficient to drive filopodia protrusion, may even get retraction retrograde flow reduced no change in adhesion actin polymerization sufficient to drive filopodia protrusion, growth cone advances Ketschek et al. (2007) Developmental Neurobiology 67(10):1395 Ena/VASP protein anti-capping is required for filopodia formation Edna/VASP KO mutant lacking filopodia Edna/VASP KO mutant lacking filopodia Dent et al. (2007) neuron 15

Neurite initiation requires dynamic microtubules Neurite initiation: coupling protrusion and adhesion Defects in Ena/VASP triple KO: Rescued by: plating on laminin & engaging integrins overexpressing mdia or myosin X (F-actin barbed end binding) inhibiting myosin II (reduced retrograde flow) Mimicked by: actin capping drug overexpressing capping protein Ena/VASP actin-binding proteins (anti-capping) proteins are critical for filopodia initiation, but... The requirement for Ena/VASP proteins in filopodia formation is substrate dependent (e.g. CNS vs. PNS) Requirement for Ena/VASP proteins can be rescued by treatments that enhance filopodia formation OR decrease retrograde flow Dent et al. (2007) Nature Neuroscience 9(12):1347. 16

Neurite initiation: coupling protrusion, adhesion and exocytosis Different substrates may activate different intracellular signaling cascades and activate different actin-binding proteins that can drive filopodia formation VAMP2 & VAMP7 are vsnares that are involved in different types of exocytosis ena/vasp dependent neurite initiation is integrin-independent and requires VAMP2 in the absence of ena/vasp, Arp2/3 can drive neurite initiation, but this requires integrin activity (& substrate) and VAMP7 exocytosis its critical, but what "substrate" is exocytosed not known... secreted, membrane associated and transmembrane This is not the first time we've seen substrate dependence Dent et al. (2007) Nature Neuroscience 9(12):1347. Gupton & Gertler, Dev Cell 18, 725 736 (2010) Neurite Initiation Filopodia formation is the first step Actin dynamics must be coupled to dynamic microtubules substrate adhesion a clutch exocytosis retrograde flow The actual proteins required for neurite initiation is context dependent e.g. effects of Ena/VASP depletion would not be apparent if the experiment is done in cortical neurons plated on laminin (a very common method) or in a neuron type that expressed mdia. 17