A fluorescent ph probe for acidic organelle in living cells

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Electronic Supplementary Material (ESI) for rganic & Biomolecular Chemistry. This journal is The Royal Society of Chemistry 2017 Supporting Information for A fluorescent ph probe for acidic organelle in living cells

General procedure for the synthesis of naphthalimide derivatives (Scheme 1). Synthesis of the naphthalimide derivative is shown in the steps (i), (ii) of Scheme 1. The first stage of the reaction, in which commercial starting material 4-bromo-1,8- naphthalic anhydride was reacted with N,N-dimethylethane-1,2-diamine or N- butylamine, was performed conveniently in ethanol under room temperature. Next, the samples were subjected to the Heck coupling reaction with 4-vinylaniline or 4- methoxystyrene under catalyst Pd(Ac) 2. Details of the synthesis of NIM-1 1 and ABN 2 are described in the previous results. N N N N (ii) (i) Br 1 R 1 Br (i) N (ii) N Br 2 R 2 R 1 = NH 2 CH 3 R 2 = NH2 ADA NIM-1 ANB Scheme 1 Reagents and conditions: (i) N,N-dimethylethane-1,2-diamine (ADA, NIM-1) or n-butylamine (ANB), EtH, r.t. 24 h; (ii) Pd(Ac) 2 /(o-tol) 3 P, 4-vinylaniline (ADA, ANB), 4-methoxystyrene (NIM-1), Et 3 N/MeCN, N 2, reflux, 48 h. (ref: (1) H. H. Lin, Y. C. Chan, J. W. Chen and C. C. Chang, J. Mater. Chem., 2011, 21, 3170-3177. (2) Y. T. Tung, C. C. Chang, Y. L. Lin, S. L. Hsieh, G. J. Wang, Biosensors and Bioelectronics, 2016, 77, 90 98.) 2-(6-bromo-1, 3-dioxo-1H-benzo[de] isoquinolin-2(3h)-yl)-n, N-dimethyl ethanamine (compound 1): 4-Bromo-1, 8-naphthalic anhydride (10 mmole) and N, N-dimethylethane-1, 2- diamine (12 mmole) was stirred in ethanol solution (20 ml) under room temperature for 12h. The system was filtered to remove the excess N, N-dimethylethane-1, 2-diamine and the collected precipitate was crystallized from acetone/ethanol to get white solid (yield: 70%). Data for compound 1: 1 HNMR (400Hz, CDCl 3, δ in ppm)= 8.65 (d, J = 8

Hz, 1H), 8.56 (d, J = 8 Hz, 1H), 8.41 (d, J = 8 Hz, 1H), 8.03 (d, J = 8 Hz, 1H), 7.84 (t, J = 8 Hz, 1H), 4.34 (t, J = 8 Hz, 2H), 2.72 (t, J = 8 Hz, 2H), 2.40 (s, 6H). N-butyl-4-bromo-1,8-naphthalimide (compound 2): 4-Bromo-1, 8-naphthalic anhydride (10 mmole) and N-butylamine (12 mmole) was stirred in ethanol solution (20 ml) under room temperature for 12h. The system was filtered to remove the excess amine and the collected precipitate was crystallized from acetone/ethanol to get white solid (yield: 78%). Data for compound 2: 1 HNMR (400Hz, CDCl 3, δ in ppm)= 8.65 (d, J = 8 Hz, 1H), 8.56 (d, J = 8 Hz, 1H), 8.41 (d, J = 8 Hz, 1H), 8.03 (d, J = 8 Hz, 1H), 7.85 (t, J = 8 Hz, 1H), 4.17 (t, J = 8 Hz, 2H), 1.69 (m, 2H), 1.44 (m, 2H), 0.97 (t, J = 8 Hz, 3H). 2-(6-(4-aminostyryl)-1,3-dioxo-1H-benzo[de] isoquinolin-2(3h)-yl)-n, N- dimethylethanamine (ADA): Compound 1 (5 mmole) was added into to a high pressure bottle containing the a mixture of palladium (II) acetate (8 mg, Strem) and tri-o-tolyl phosphine (80 mg, Aldrich), then to which was added the solvent pair (triethylamine 5 ml / acetonitrile 15 ml) and 4-vinylaniline (7 mmole, Acros). The bottle was then sealed after bubbling with nitrogen for 10 min. After keeping the system under ~105 C for 48 h, the system was cooled to room temperature and then extracted with CH 2 Cl 2 / H 2 twice. The organic layer was then dried by with MgS 4 and evaporated in vacuum. The residue was subjected to chromatography on a silica gel by using acetone / hexane (1/2, Rf = 0.4). The deep-red solid was then obtained by recrystallizing with acetone / hexane (yield: 50%). Data for ADA: 1 H NMR(400 Hz, DMS-d 6 ):δ = 8.96 (d, J = 8 Hz, 1H), 8.51 (d, J = 8 Hz, 1H), 8.41 (d, J = 8 Hz, 1H), 8.15 (d, J = 8 Hz, 1H), 7.86 (d, J = 8 Hz, 1H), 7.86 (t, J = 16 Hz, 1H), 7.55 (d, J = 6.8 Hz, 2H), 7.47 (d, J = 16 Hz, 1H), 6.61 (d, J = 6.8 Hz, 2H), 5.59 (s, 2H), 4.15 (t, J = 8 Hz, 2H), 2.50 (t, J = 8 Hz, 2H), 2.20 (s, 6H) ppm. 13 C NMR (400.00 MHz, DMS-d6): δ= 164.10, 163.77, 152.06, 150.76, 142.76, 140.77, 137.72, 136.89, 136.64, 131.48, 129.98, 129.67, 129.30, 128.80, 127.28, 127.01, 124.96, 122.80, 122.54, 119.72, 117.44, 117.18, 114.99, 114.57, 114.35, 110.37, 106.46, 101.15, 57.38, 57.16, 46.38, 46.16, 45.95 ppm. HRMS (ESI, m/z): [M+H] + 386.18; found, 386.7. EA: Anal. Calcd. For C 24 H 23 N 3 2 : C, 74.78; H, 6.01; N, 10.90 (%). Found: C, 73.75; H, 6.09; N, 10.75 (%).

Figure S1 Figure S1: Solvent effects of compounds (a) NIM-1 and (b) ANB in neutral conditions, represented by extinction coefficient for absorbance and quantum yield for emission spectra.

Figure S2 Absorbance (a.u.) 0.6 0.4 0.2 (a) 395 460 Absorbance (a.u.) 1 2 3 4 5 6 7 1 2 3 4 5 6 7 8 pka 395 nm 460 nm Emission Intensity pka 495nm 1.5 1.0 0.5 Emission (a.u.) Ansorbance (a.u.) 0.0 0.6 0.4 0.2 (b) 400 400 500 600 700 476-485 Ansorbance (a.u.) 400 nm 480 nm 400 500 600 700 800 495 2 3 4 5 6 7 8 2 3 4 5 6 7 8 Pka 600 Emission Intensity Pka2 Pka1 Pka 495nm 600nm 2 1 0.0 4 3 2 1 Emission (a.u.) 0.0 400 500 600 700 400 500 600 700 800 0 Figure S2: ADA (30 M) absorption (left) and emission (right) spectral variations as a function of addition of [H + ] in (a) DMS/H 2 =1/1 and (b) DMS/H 2 =1000/1 in v/v. Inserts show peak intensities plots against ph. (Excited wavelength= 400 nm).

Figure S3 Absorbance (a.u.) Photon counting (X10 6 ) 1.0 0.5 0.0 8 6 4 2 0 (a) [H + ] 0 um [H + ]-12.5 [H + ]-25 [H + ]-50 [H + ]-100 [H + ]-150 [H + ]-200 [H + ]-300 [H + ]-400 [H + ]-700 [H + ]-1000 [H + ]-1.5x 10 3 [H + ]-2x 10 3 [H + ]-3x 10 3 [H + ]-4x 10 3 [H + ]-7x 10 3 300 400 500 600 700 [H + ] 0 um [H + ]-12.5 [H + ]-25 [H + ]-50 [H + ]-100 [H + ]-150 [H + ]-200 [H + ]-300 [H + ]-400 [H + ]-700 [H + ]-1000 [H + ]-1.5x 10 3 [H + ]-2x 10 3 [H + ]-3x 10 3 [H + ]-4x 10 3 [H + ]-7x 10 3 (b) 400 500 600 700 800 Figure S3: Compound NIM-1 (30 M) absorption (a) and emission (b) spectral variations as a function of adding [H + ] in DMS. (excited wavelength= 420 nm in (b))

Figure S4 Absorbance (a.u.) 1.2 1.0 0.8 0.6 0.4 0.2 (a) [H + ]-0 um [H + ]-50 [H + ]-250 [H + ]-500 [H + ]-1000 [H + ]-1.5*10 3 [H + ]-2*10 3 [H + ]-3*10 3 [H + ]-4*10 3 [H + ]-5*10 3 [H + ]-7*10 3 [H + ]-10*10 3 [H + ]-16*10 3 [H + ]-48*10 3 [H + ]-72*10 3 um Photon counting (X10 6 ) 0.0 15 10 5 0 20 15 10 5 0 300 400 500 600 700 [H + ]-0 um [H + ]-50 [H + ]-250 [H + ]-500 [H + ]-1000 [H + ]-1.5*10 3 [H + ]-2*10 3 [H + ]-3*10 3 [H + ]-4*10 3 [H + ]-5*10 3 [H + ]-7*10 3 [H + ]-10*10 3 [H + ]-16*10 3 [H + ]-48*10 3 [H + ]-72*10 3 um 400 500 600 700 800 (c) [H + ]-0 um [H + ]-50 [H + ]-250 [H + ]-500 [H + ]-1000 [H + ]-1.5*10 3 [H + ]-2*10 3 [H + ]-3*10 3 [H + ]-4*10 3 [H + ]-5*10 3 [H + ]-7*10 3 [H + ]-10*10 3 [H + ]-16*10 3 [H + ]-48*10 3 [H + ]-72*10 3 um 400 500 600 700 800 (b) Figure S4: Compound ANB (30 M) absorption (a) and emission (b) (c) spectral variations as a function of adding [H + ] in DMS. Inserts show the peak intensity plots against ph. (excited wavelength= 480 nm in (b); 400 nm in (c))

Figure S5 Absorbance (a.u.) PL intensity (a.u.) 0.6 0.4 0.2 0.0 300 400 500 600 700 3 2 1 0 3 2 1 (a) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol (b) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol (c) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol 0.6 0.4 0.2 0.0 300 400 500 600 700 20 15 10 5 0 20 10 (d) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol (e) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol (f) 100% ethanol 85% ethanol 70% ethanol 55% ethanol 40% ethanol 20% ethanol 0% ethanol 0 500 600 700 800 0 500 600 700 800 Figure S5: Compound ADA (30 M) absorption (a) and emission (b) (c) spectral in variable ratios of neutral ethanol/glycerol solutions. (d)(e)(f) Represent the ADA in variable ratios of 0.1 M [H + ] ethanol/glycerol solutions. (excited wavelength= 460 nm in (b); 400 nm in (c))

Figure S6 Figure S6: Fluorescent images of HeLa, CL1-0 cancer cells and MRC-5 normal cell stained with (a) NIM-1 and (b) ANB (5 M) for 4 hour. (cube for (a): ex, 390/10 nm; em, 410 nm lp filter); (cube for (b): ex, 470/20 nm; em, 515 nm lp filter)

Figure S7 Figure S7. Sub-cellular localization of 5 M ADA in MRC-5 normal cells (a) (b) and CL1-0 cancer cells (c) (d). The images of tracker red were excited by a green light cube that passed light through a 530±20 nm bp filter and emission was collected through a 590 nm lp filter. The green images of the compound ADA were excited by a UV light cube that passed light through a 390±10 nm bp filter and emission was collected through a 410 nm lp filter. Co localization was analyzed by the Pearson correlation coefficient (PCC)

Figure S8 Figure S8: A time-dependent intracellular accumulation illustration of 5 M NIM- 1 in MRC-5 normal cells, HeLa cancer cells and CL1-0 cancer cell, respectively. The UV cube (ex 390/10 nm, 410 long pass filter) was used to collect images.

Figure S9 Figure S9: A time-dependent intracellular accumulation illustration of 5 M ANB in MRC-5 normal cells, HeLa cancer cells and CL1-0 cancer cell, respectively. The blue cube (ex 470/20 nm, 515 long pass filter) was used to collect images.

Figure S10

Table S1: Solvent effect of compound ADA in neutral and 150, 400 and 3000 M of [H + ] acidic conditions, represented by emission wavelengths and intensities. [H + ] (μm) solvent Fluo(nm)/int. H 2 (Ex:440) MeH (Ex:445) EtH (Ex:450) MeCN (Ex:440) DMS (Ex:480) Acetone (Ex:450) EA (Ex:440) THF (Ex:450) Chloroform (Ex:435) Toluene (Ex:430) 0 150 400 3000 nd 520/11903 515/17428 515/50218 (Em/Intensity) 670/14486 nd nd nd 675/42853 675/21342 675/20864 nd 670/205700 675/41982 675/37068 480/104324 695/59646 700/27380 700/27379 600/92586 665/570345 600,665/ 595,665/ 490/215950 270415,203594 174390,127773 630/1859730 635/113240 555/101656 nd 630/2816900 640/1756388 640/1319990 540/250632 605/3167790 610/1636480 610/1294440 515/38445 575/2104045 570/716793 570/655714 nd

APPENDIX