Data Modelling, Spatial Technology & Operations in the National Banana Freckle Presentation Title Eradication Program (NBFEP) Presenter name Date of presentation San Kham Hornby, Hock Lee, Shane Penny and Miguel Tovar-Valencia 18/05/2016 DEPARTMENT OF PRIMARY INDUSTRY AND FISHERIES
What is Banana Freckle A disease caused by a fungus (Phyllosticta cavendishii), which infects leaves and fruits of bananas. Banana tree is the only host. Yield reduction, Increased fungicide use, reduced storage life but more important affects Australia s advantageous pest and disease status
BioSecurity Response August 2013 to September 2014 National Banana Freckle Eradication Program (NBFEP) 3 years : October 2014 to May 2017 Phase 1 October 2014 to May 2015 Six areas declared quarantine (Red Zones). Surveillance on 41,500 addresses, >50,0000 plants destroyed. 1/6 self destroyed by owners Phase 2 June 2015- April 2016 Fallow period 6 months with full wet season of no banana plants including regrowth. Movement restrictions of banana fruit and plants into and within 6 quarantine zones. Phase 3 May 2016- April 2017 Replanting period (Sentinel Phase) on a random stratified selection of 3,000 addresses. Only by permit. Inspections at 60-90 days intervals. Movement continues. Surveillance on areas where the disease has not been found (Green Zone). Rest on NT (Katherine)
Zone 1 One of the largest Biosecurity Response in Australia for Area (more than 5 000 km 2 ), Duration (almost 4 years) and premises (addresses) thus people affected ACT 45,000 Premises surveyed 9,500 Premises with bananas 250 Infected Premises (IPs) 158 staff on Phase 1 3,000 Sentinel Premises
The NBFEP prerequisite spatial data & analysis for each of its Incident Control Functions: Local Incident Control State Policy Finance & Admin Logistics Planning Operations Public Information GIS, mapping, data analysis
BioSIRT Application BioSIRT (Biosecurity Surveillance I ncident Response & Tracing) Web-based national biosecurity information management system For use in emergency response and routine surveillance in the plant, animal, aquatic, disease and pest All Jurisdictions
BioSIRT 3 Main Components 1. CRIS (Client Resource Information System) - Record the spatial detail about land and party details 2. SQCR (Surveillance Quarantine Control Recovery) - Record the routine and emergency incident activities and their property status 3. RMP (Resource Management Package) - Manage resource use, team roster, consumables
BioSIRT context and scalability
Advantages National consistency in recording, reporting, managing outbreaks Reduce time for action in a response All jurisdictions using the same program Users can be deployed to assist in emergency interstate Control centres able to use the system immediately Cover emergency and routine Can move from routine to emergency easily Preparation for emergency use Flows from daily use in routine operations
Disadvantages Does not suit the business needs Complex and difficult to use No mapping geoprocessing and analysis tools Stop funding for further development on 2013 therefore the NT is testing and preparing to implement MAX (Maximum Disease and Pest Management) a BioSecurity web enable data base
BioSIRT Data Model (tables and views)
The GIS Realm Semi-automatic Spatial System Need daily production of numerous maps within time constraint (surveillance and destruction) Staff members at various locations need a portable system Able to grab and combine spatial and non-spatial from BioSIRT for analysis Provision for semi-automation maps production
Workspace & File Names Need to be fixed and unchanging. Just need to refresh the data to the latest Printed Map changes automatically with the refreshed data Use producing daily field maps as an example to elaborate on the system.
Daily Maps
Daily Maps
Daily Maps
Fixed Workspace & File Names Base Data Input Output Razor_SQL Access DB Request e.g. RIVERS_LAKES_line.shp, ROAD_line.shp e.g. CULTIVARS_LAB.xlsx, ARP_Export.xls, Localities_s1_to_26_P.shp, Section1.shp Localities_s1_to_26_L.shp, Daily_Map.mxd, Section_MapL.mxd Section_MapP.mxd, BananaFreckle.tbx e.g. Export_poly.shp, Export_pt.shp Cadastre_RA.xls, Cadastre_RA.shp, Cadastre_ARP_S1.shp e.g. Cavendish.sql, Biosirt_data.sql e.g. Conversion.xls, StatusValue.xls, StemDes.xls e.g. BF250_20140628_Daily_Map_All, BF245_20140625_Gazette_Map Banana Freckle Mapping Procedures 2014.pdf
RazorSQL 3 scripts - Weekly_Ups, ARP_Export.sql, and Cavendish_sql. Run the scripts and export them as Weekly_UPs.xls, ARP_Export.xls, and Cavendish_sql.xls respectively. Data Extraction ArcGIS Database Connection Connect to Biosirt Oracle Database (Oracle sql view) via ArcGIS Connection to DCSORA04_BIOP.NT.GOV.A U.sde Export the latest poly and pt shape file, BIOSIRT.V_SPATIAL_EVEN TSLATEST_POLY And BIOSIRT.V_SPATIAL_EVEN TSLATEST_POINT into the output folder:
Custom Toolbox - model builder Run automations in ArcCatalog Run 1, 2, 3, 4 BananaFreckle.tbx Mapping Tools Outputs Analysis results in excel files, various layer data - cadastre info + lab results + survey data + analysis data
Model Design Mapping Tools
Mapping Tools Data Driven Pages - Definition Use dynamic Page Name & Date Export to automate printing map in pdfs
Mapping Tools Microsoft Access Database for joining many data tables
Mapping Tools Non-relevant Premises Data Integrity Reducing target premises No bananas on boats
Spatial Data Life Cycle Phase 1 Surveillance /Destruction BioSIRT Phase 2 Monitoring /Regrowth Phase 3 Sentinel/ Surveillance Each demanding distinct data Input & Outputs (maps and reports) GIS OPERATIONS Data Validation Data Integrity Data Completeness
Phase 1. Surveillance/Destruction FIELD OPERATIONS Crew teams required daily maps by sectors Re-surveillance
Phase 1: Field validation to GIS into BioSirt Remote communities don t have parcels
Phase 2. GIS to Operation to BioSirt Aerial Surveillance Flying Plan
Phase 2. Field Operation into BioSirt Data Validation Crew teams ground knowledge
Phase 3: GIS to other systems GIS Layers into NT Visualizer Two Weekly Shapefile to KMZ Primary Colours combination Orange Violet
All Phases: GIS to Media and Community Engagement with the Community Weekly summary of field advances
Post Phase 2: GIS and Risk Zone 1 Risk Assessment Map on subdivisions
GIS to SharePoint, an internal reporting tool SharePoint a browser-based collaboration and document management platform enabling reporting
In a nutshell.. A Biosecurity Response needs to address as early as possible all their spatial needs (know your data) making use, and adapting, easy and simple but at the same time robust and reliable tools (automation) where data validation is achievable during all phases of its life cycle, hence reporting and spatial products are in sync BUT more important are:
NBFEP February 2016 Edition 2016 National Recognition Best on the government category
Thank you