tert-butyl 2-(3-acetylamino-2-oxo-1,2-dihydro-1- pyridyl)acetate Author Published Journal Title DOI Copyright Statement Downloaded from

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Transcription:

tert-butyl 2-(3-acetylamino-2-oxo-1,2-dihydro-1- pyridyl)acetate Author Karis, David, Loughlin, Wendy, Jenkins, Ian, Healy, Peter Published 2008 Journal Title Acta Crystallographica. Section E, Structure reports online DOI https://doi.org/10.1107/s1600536808039810 Copyright Statement The Author(s) 2008. For information about this journal please refer to the journal's website. All articles published in Acta Crystallographica Section E are open access and distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. See http:// creativecommons.org/licenses/by/2.0/uk/legalcode Downloaded from http://hdl.handle.net/10072/21285 Link to published version http://journals.iucr.org/e/journalhomepage.html Griffith Research Online https://research-repository.griffith.edu.au

ISSN 1600-5368 Inorganic compounds Metal-organic compounds Organic compounds Acta Crystallographica Section E Structure Reports Online ISSN 1600-5368 Editors: W.T. A. Harrison, J. Simpson and M. Weil tert-butyl 2-(3-acetylamino-2-oxo-1,2-dihydro-1-pyridyl)acetate N. David Karis, Wendy A. Loughlin, Ian D. Jenkins and Peter C. Healy Acta Cryst. (2008). E64, o2492 o2493 This open-access article is distributed under the terms of the Creative Commons Attribution Licence http://creativecommons.org/licenses/by/2.0/uk/legalcode, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. Volume 61 Part 11 November 2005 Acta Crystallographica Section E Structure Reports Online Editors: W. Clegg and D. G. Watson Acta Crystallographica Section E: Structure Reports Online is the IUCr s highly popular open-access structural journal. It provides a simple and easily accessible publication mechanism for the growing number of inorganic, metal-organic and organic crystal structure determinations. The electronic submission, validation, refereeing and publication facilities of the journal ensure very rapid and high-quality publication, whilst key indicators and validation reports provide measures of structural reliability. In 2007, the journal published over 5000 structures. The average publication time is less than one month. journals.iucr.org International Union of Crystallography * Chester Crystallography Journals Online is available from journals.iucr.org Acta Cryst. (2008). E64, o2492 o2493 Karis et al. C 13 H 18 N 2 O 4

organic compounds Acta Crystallographica Section E Structure Reports Online ISSN 1600-5368 tert-butyl 2-(3-acetylamino-2-oxo-1,2- dihydro-1-pyridyl)acetate N. David Karis, a Wendy A. Loughlin, b Ian D. Jenkins a and Peter C. Healy b * Data collection Rigaku AFC-7R diffractometer Absorption correction: none 2731 measured reflections 2428 independent reflections 1482 reflections with I > 2(I) Refinement R[F 2 >2(F 2 )] = 0.052 wr(f 2 ) = 0.162 S = 1.02 2428 reflections R int = 0.046 3 standard reflections every 150 reflections intensity decay: 0.6% 176 parameters H-atom parameters constrained max = 0.27 e Å 3 min = 0.27 e Å 3 a Eskitis Institute for Cell and Molecular Therapies, Griffith University, Nathan, Brisbane 4111, Australia, and b School of Biomolecular and Physical Sciences and Eskitis Institute for Cell and Molecular Therapies, Griffith University, Nathan, Brisbane 4111, Australia Correspondence e-mail: P.Healy@griffith.edu.au Received 24 November 2008; accepted 25 November 2008 Key indicators: single-crystal X-ray study; T = 295 K; mean (C C) = 0.004 Å; R factor = 0.052; wr factor = 0.162; data-to-parameter ratio = 13.8. The title compound, C 13 H 18 N 2 O 4, crystallizes as discrete molecules associated as N HO hydrogen-bonded dimers disposed about a crystallographic inversion centre. The structure is the first solid-state structure for a 3-acetylpyridone without C-4 to C-6 substituents. The amide subsituent at C-3 is coplanar with the pyridone ring, while the tert-butyl ester group is orthogonal to the pyridine ring. The amide and ester carbonyl O atoms are not involved in strong hydrogen bonding with only a number of intramolecular and intermolecular C HO interactions apparent in the structure. Related literature For general background, see: Bernstein et al. (1994); Dragovich et al. (2002); Hu et al. (2008); Karis et al. (2007); Kim et al. (2008); Loughlin et al. (2004); Reiner et al. (1999); Semple et al. (1998); Veale et al. (1995). For the synthesis, see: Sanderson et al. (1997); Tamura et al. (1996). For related structures. see: Karis et al. (2006); Yang & Craven (1998). Experimental Crystal data C 13 H 18 N 2 O 4 M r = 266.29 Monoclinic, P2 1 =c a = 13.9417 (15) Å b = 5.585 (1) Å c = 17.861 (2) Å = 97.039 (9) V = 1380.3 (3) Å 3 Z =4 Mo K radiation = 0.10 mm 1 T = 295 (2) K 0.40 0.30 0.20 mm Table 1 Hydrogen-bond geometry (Å, ). D HA D H HA DA D HA N3 H3O2 i 0.86 2.34 3.164 (3) 161 C4 H4O3 0.95 2.23 2.830 (3) 120 C14 H14AO3 ii 0.96 2.56 3.465 (4) 157 C15 H15AO11 0.96 2.44 2.980 (4) 115 C16 H16AO11 0.96 2.44 2.978 (5) 115 C32 H32CO2 i 0.96 2.33 3.222 (3) 155 Symmetry codes: (i) x þ 2; y þ 1; z; (ii) x 1; y; z. Data collection: MSC/AFC7 Diffractometer Control Software (Molecular Structure Corporation, 1999); cell refinement: MSC/ AFC7 Diffractometer Control Software; data reduction: TEXSAN for Windows (Molecular Structure Corporation, 2001); program(s) used to solve structure: TEXSAN for Windows; program(s) used to refine structure: TEXSAN for Windows and SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: TEXSAN for Windows and PLATON (Spek, 2003). We acknowledge financial support of this work by Griffith University, Eskitis Institute for Cell and Molecular Therapies, Griffith University, and Natural Product Discovery, Griffith University. We also thank Alan White for professional support in this work. Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT2816). References Bernstein, P. R., Andisik, D., Bradley, P. K., Bryant, C. B., Ceccarelli, C., Damewood, J. R. Jr, Earley, R., Edwards, P. D., Feeney, S., Gomes, B. C., Kosmider, B. J., Steelman, G. B., Thomas, R. M., Vacek, E. P., Veale, C. A., Williams, J. C., Wolanin, D. J. & Woolson, S. A. (1994). J. Med. Chem. 37, 3313 3326. Dragovich, P. S., Prins, T. J., Zhou, R., Brown, E. L., Maldonado, F. C., Fuhrman, S. A., Zalman, L. S., Tuntland, T., Lee, C. A., Patick, A. K., Matthews, D. A., Hendrickson, T. F., Kosa, M. B., Liu, B., Batugo, M. R., Gleeson, J.-P. R., Sakata, S. K., Chen, L., Guzman, M. C., Meador, J. W., Ferre, R. A. & Worland, S. T. (2002). J. Med. Chem. 45, 1607 1623. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. Hu, E., Tasker, A., White, R. D., Kunz, R. K., Human, J., Chen, N., Burli, R., Hungate, R., Novak, P., Itano, A., Zhang, X., Yu, V., Nguyen, Y., Tudor, Y., Plant, M., Flynn, S., Xu, Y., Meagher, K. L., Whittington, D. A. & Ng, G. Y. (2008). J. Med. Chem. 51, 3065 3068. Karis, N. D., Loughlin, W. A. & Jenkins, I. D. (2007). Tetrahedron, 63, 12303 12309. Karis, N. D., Loughlin, W. A., Jenkins, I. D. & Healy, P. C. (2006). Acta Cryst. E62, o2714 o2716. o2492 Karis et al. doi:10.1107/s1600536808039810 Acta Cryst. (2008). E64, o2492 o2493

organic compounds Kim, K. S., Zhang, L., Schmidt, R., Cai, Z.-W., Wei, D., Williams, D. K., Lombardo, L. J., Trainor, G. L., Xie, D., Zhang, Y., An, Y., Sack, J. S., Tokarski, J. S., Darienzo, C., Kamath, A., Marathe, P., Zhang, Y., Lippy, J., Jeyaseelan, R., Wautlet, B., Henley, B., Gullo-Brown, J., Manne, V., Hunt, J. T., Fargnoli, J. & Borzilleri, R. M. (2008). J. Med. Chem. 51, 5330 5341. Loughlin, W. A., Tyndall, J. D. A., Glenn, M. P. & Fairlie, D. P. (2004). Chem. Rev. 104, 6085 6117. Molecular Structure Corporation (1999). MSC/AFC7 Diffractometer Control for Windows. MSC, The Woodlands, Texas, USA. Molecular Structure Corporation. (2001). TEXSAN for Windows. MSC, The Woodlands, Texas, USA. Reiner, J. E., Lim-Wilby, M. S., Brunck, T. K., Ha-Uong, T., Goldman, E. A., Abelman, M. A., Nutt, R. F., Semple, J. E. & Tamura, S. Y. (1999). Bioorg. Med. Chem. Lett. 9, 895 900. Sanderson, P. E., Naylor-Olsen, A. M., Dyer, D. L., Vacca, J. P., Isaacs, R. C. A., Dorsey, B. D. & Frayler, M. E. (1997). PCT Int. Appl. WO 9 701 338. Semple, G., Ashwoth, D. M., Batt, A. R., Baxter, A. J., Benzies, D. W. M., Elliot, L. H., Evans, D. M., Franklin, R. J., Hudson, P., Jenkins, P. D., Pitt, G. R., Rooker, D. P., Yamamoto, S. & Isomura, Y. (1998). Bioorg. Med. Chem. Lett. 8, 959 964. Sheldrick, G. M. (2008). Acta Cryst. A64, 112 122. Spek, A. L. (2003). J. Appl. Cryst. 36, 7 13. Tamura, S. Y., Semple, J. E., Ripka, W. C., Ardecky, R. J., Ge, Y., Carpenter, S. H., Brunck, T. K., Lim-Wilby, M. S., Nutt, R. F. & Abelman, M. M. (1996). PCT Int. Appl. WO 9 618 644. Veale, C. A., Bernstein, P. R., Bryant, C., Ceccarelli, C., Damewood, J. R. Jr, Earley, R., Feeney, S. W., Gomes, B., Kosmider, B. J., Steelman, G. B., Thomas, R. M., Vacek, E. P., Williams, J. C., Wolanin, D. J. & Woolson, S. A. (1995). J. Med. Chem. 38, 98 108. Yang, H. W. & Craven, B. M. (1998). Acta Cryst. B54, 912 920. Acta Cryst. (2008). E64, o2492 o2493 Karis et al. C 13 H 18 N 2 O 4 o2493