WOODS HOLE OCEANOGRAPHIC INSTITUTION. Applied Ocean Physics and Engineering Department

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WOODS HOLE OCEANOGRAPHIC INSTITUTION Applied Ocean Physics and Engineering Department July 16, 2014 Dr. Thomas Drake Office of Naval Research, Code 322 One Liberty Center 875 North Randolph Street Arlington, VA 22203-1995 Dear Dr. Drake: Enclosed is the Final Report for ONR Grant No. N00014-13-1-0197 entitled "Sediment Transport at Density Fronts in Shallow Water," Principal Investigator Dr. David Ralston. Sincerely, i^yyj lyiuhfarfortuu, Gretchen McManamin Administrative Assistant to Dr. David Ralston Enclosure cc: Administrative Grants Officer v.defense Technical Information Office Naval Research Laboratory Grant and Contract Services (WHOI) AOPE Department Office (WHOI) MS#12 Woods Hole, MA 02543 USA 508.289.2587 Fax 508.457.2194

REPORT DOCUMENTATION PAGE Form Approved OMB No. 0704-0188 The public reporting burden for this collection of information is estimated to average 1 hour per response, including the time for reviewing instructions, searching existing data sources, gathering and maintaining the data needed, and completing and reviewing the collection of information. Send comments regarding this burden estimate or any other aspect of this collection of information, including suggestions for reducing the burden, to Department of Defense, Washington Headquarters Services, Directorate for Information Operations and Reports (0704-0188), 1215 Jefferson Davis Highway, Suite 1204, Arlington, VA 22202-4302. Respondents should be aware that notwithstanding any other provision of law, no person shall be subject to any penalty for failing to comply with a collection of information if it does not display a currently valid OMB control number. PLEASE DO NOT RETURN YOUR FORM TO THE ABOVE ADDRESS. 1. REPORT DATE (DD-MM-YYYY) 16/07/2014 2. REPORT TYPE Final 4. TITLE AND SUBTITLE Sediment Transport at Density Fronts in Shallow Water 6. AUTHOR(S) David Ralston 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Woods Hole Oceanographic Institution 569 Woods Hole Road, MS #14 Woods Hole, MA 02543-1041 3. DATES COVERED (From - To) 06/01/2008-12/31/2013 5a. CONTRACT NUMBER 5b. GRANT NUMBER N00014-13-1-0197 5c. PROGRAM ELEMENT NUMBER 5d. PROJECT NUMBER 13PR02578-00 5e. TASK NUMBER 5f. WORK UNIT NUMBER 8. PERFORMING ORGANIZATION REPORT NUMBER 9. SPONSORING/MONITORING AGENCY NAME(S) AND ADDRESS(ES) Office of Naval Research (ONR) Office of Naval Research, Code 322 One Liberty Center, Room 1076 875 N. Randolph Street, Suite 1425 Arlington, VA 22203-1995 12. DISTRIBUTIOVAILABILITY STATEMENT Approved for public release; distribution is unlimited. 10. SPONSOR/MONITOR'S ACRONYM(S) 11. SPONSOR/MONITOR'S REPORT NUMBER(S) 13. SUPPLEMENTARY NOTES None 14. ABSTRACT See Attached 15. SUBJECT TERMS Skagit Tidal Flats, Finite Volume Coastal Ocean Model (FVCOM), Community Sediment Transport Model System (CSTMS) 16. SECURITY CLASSIFICATION OF: a. REPORT u b. ABSTRACT u C. THIS PAGE u 17. LIMITATION OF ABSTRACT UU ^öw<miös# 18. NUMBER OF PAGES 5 19a. NAME OF RESPONSIBLE PERSON Dr. David Ralston 19b. TELEPHONE NUMBER (Include area code) 508-289-2587 Standard Form 298 (Rev. 8/98) Prescribed by ANSI Std. 239.18

Final Report Sediment transport at density fronts in shallow water: A Continuation of N00014-08-1-0846 David K. Ralston Applied Ocean Physics and Engineering, MS #12 Woods Hole, MA 02543 phone: (508) 289-2587 fax: (508) 457-2194 email: dralston@whoi.edu Award Number: N00014-13-1-0197 LONG-TERM GOALS The goal of the overall research was to quantify through observations and modeling how density fronts in shallow estuarine flows impact the mobilization, redistribution, trapping, and deposition of suspended sediment. This current award was a continuation of the original YIP award in order to deliver a remaining increment of funds that had not been allocated. The focus of this continuation was to examine how stratification on the tidal flats varies in parameter space as a function of dimensionless numbers. OBJECTIVES The objectives of this continuation award were to analyze results from a high-resolution, 3-dimensional, finite-volume hydrodynamic model of the Skagit tidal flats to examine processes leading to the creation and destruction of stratification, - use the Simpson number to represent the balance between tidal straining and tidal mixing to place the physical processes on the tidal flats in a more general context of estuarine and coastal stratification dynamics APPROACH The research builds off an extensive observation and modeling field program on the tidal flats of the Skagit River delta. In the field, we measured velocity, stratification, and suspended sediment at high resolution in shallow flows, tracking the evolution of salinity fronts through the tidal cycle. A major field effort occurred in June 2009 on the Skagit Tidal flats in Puget Sound, coordinated with other researchers in the Tidal Flats DRI. Focused observations of the shallow density front and its evolution through the tidal cycle were complemented by a large scale array of moored instruments deployed during the same period (along with Geyer and Traykovski). These observations, along with observations collected by other investigators (Raubenheimer and Elgar) on other parts of the Skagit tidal flats were used to assess the validity of the numerical model results. In parallel with the observations, we developed a numerical model of the Skagit tidal flats. The model used the Finite Volume Coastal Ocean Model (FVCOM), but was modified to incorporate recent advancements in sediment transport modeling with the Community Sediment Transport Model System

(CSTMS). The unstructured grid of FVCOM allows the model to simulate conditions the Skagit flats with enhanced grid resolution near the observations. The observations were used to calibrate the model and to evaluate how well the model represents sharp salinity gradients at fronts, both across the tidal flats and at lateral fronts coinciding with channel-shoal bathymetry. Collectively, analyses of the observations and model were used to quantify how local frontal processes on scales of 10's to 100's of meters impact retention, redistribution, and export of sediment over tidal flats on scales of kilometers. Model results from simulations of the observation periods in 2009 and idealized tidal and river forcing conditions provide the basis for the analysis of stratification on the tidal flats in this current project. The analysis was done in collaboration with V. Pavel, a recent graduate of the WHOI joint program, and her advisor B. Raubenheimer. Figure 1. Bathymetry of the Skagit Bay tidal flats (left) with a zoom on the study area on the southern flats (right). Red dots indicate frame locations and lines show across-flats and across-channel survey lines. WORK COMPLETED Extensive field efforts and model development occurred under related projects, but here the focus was on assessing the proceses governing stratification on the tidal flats (Fig. 2). Data collected during field campaigns on the Skagit tidal flats in 2009 were compared with the model results for those periods. Several manuscripts have been published recently related to this effort. Topics included quantifying impacts of estuarine and fluvial process on sediment fluxes (Ralston et al., 2013), an analyses of generation mechanisms for tidal asymmetries on the tidal flats (Nidzieko and Ralston, 2012), and an evaluation of effects of complex topography on wind correlation length scales and implications for coastal ocean modeling (Raubenheimer et al., 2013). We also worked on applying to the model results analytical approaches to assess mechancisms of stratification creation and destruction on the tidal flats. This work is in collaboration with V. Pavel, who recently completed her Ph.D. at WHOI working with B. Raubenheimer on stratification dynamics on the Skagit tidal flats based predominantly on field obsercvations. The model provided the opportunity to generalize her observational results to other parts of the tidal flats and to link the Skagit findings to coastal settings with similar forcing regimes.

OBSERVATIONS MODEL 3 km east Figure 2. Across-shore transects of salinity on the Skagit flats, from observations (left) and model (right). Top 2 rows are during a flood tide, with a relatively strong horizontal salinity gradient and little stratification in the front; in both the model and observations a near surface layer of fresher water can be seen behind the front. Bottom 2 rows are during an ebb, when stratification was strong even in water as shallow as ~1 m. Location of transect is shown in Fig. 1. RESULTS From the Skagit model results, we found that the rate of change of stratification, quantified as the integrated potential energy anomaly O (Simpson et al. 1990), varied with the Simpson number, Si. _ '/*%** Bi dp CdU*, where g is gravity, dp/dx is the horizontal density gradient, H is the water depth, Cd is a drag coefficient, and U is the tidal velocity (Fig. 3). The Simpson number represents a dimensionless balance between the creation of stratification by straining of the horizontal density gradient versus destruction of stratification due turbulent mixing associated with tidal bottom stresses (Stacey et al. 2001). These preliminary results were from conditions focused during the period of observations and in the region where instruments were deployed were extend over a longer time series that includes a wider array of forcing conditions, and the model was used to assess how the results varied spatially with mean water depth and proximity to the river mouth. The Skagit results were compared with results from models of other estuaries, including the Hudson, Merrimack, and

Connecticut Rivers, to assess how the stratification and the Simpson number transitions found on the tidal flats fits into estuarine parameters space. The dimensionless number approach demonstrated that the Skagit stratification dynamics were similar to those in the Merrimack River estuary. While the Merrimack is much deeper (-5-10 m) than the intertidal Skagit delta, it also has strong horizontal salinity gradients and tidally asymmetric stratification found in tidal salt wedge estuaries. The results of this analysis were presented with a poster that the Physics of Estuaries and Coastal Seas Conference. 10 Simpson number Figure 3. Rate of change of stratification (d@/dt) on the Skagit tidal flats vs. Simpson number, from numerical model results (Pavel, 2012). Type 1 tides are weaker and predominantly semi-diurnal, while Type 2 tides are more energetic and have a greater diurnal component. IMPACT/APPLICATIONS Results from this project may be used to enhance hydrodynamic and morphological models of estuaries and deltas, with applications to environmental assessment for the Navy. Trapping and deposition of sediment associated with stratification and density fronts could introduce spatial and temporal variability in bed consolidation and bathymetric relief on tidal flats. The project will also help to evaluate the skill of coastal hydrodynamic models at resolving density fronts and stratification, including the surface expressions that can be assessed with remote sensing. RELATED PROJECTS This a continuation of the YIP awarded to Ralston (N00014-08-1-0846), and is closely linked to the Tidal Flats DRI. The field efforts on the Skagit were done in conjunction with Geyer and Traykovski. The model and grid development has been in collaboration with Geoff Cowles. Collaborations with others involved in the DRI include Raubenheimer and Elgar (for bathymetry, observations for model calibration, and use of the model to interpret water column and wind observations), Lerczak (model

simulations at seasonal time scales), Signell and Sherwood (CSTM implementation), and Thomson and Chickadel (bathymetry). REFERENCES Nidzieko, NJ, and DK Ralston, 2012. Tidal asymmetry and velocity skew over tidal flats and shallow channels within a macrotidal river delta. J. Geophys. Res., 117, C03001, 17 pp, doi:l 0.1029/2011JC007384. Pavel, V., 2012. Stratification on the Skagit Bay tidal flats. WHOI/MIT Joint Program thesis. Ralston, DK, WR Geyer, PA Traykovski, and NJ Nidzieko, 2013. Effects of estuarine and fluvial processes on sediment transport over deltaic tidal flats, Contintental Shelf Res., 60, S40-S57, doi: 10.1016/j.csr.2012.02.004. Raubenheimer, B., DK Ralston, S Elgar, D Giffen, and R Signell, 2013.Winds on the Skagit tidal flats, Continental Shelf Research, 60, S13-S21, doi:10.1016/j.csr.2012.02.001. Simpson, J.H., Brown, J., Matthews, J., Allen, G, 1990. Tidal straining, density currents, and stirring in the control of estuarine stratification. Estuaries, 13(2), 125-132. Stacey, M.T., Burau, J.R., Monismith, S.G., 2001. Creation of residual flows in a partially stratified estuary. Journal of Geophysical Research, 106(C8), 17,013-17,037, doi:10.1029/2000jc000576.