Major Concepts Lecture #11 Rigoberto Hernandez. TST & Transport 1

Similar documents
Major Concepts Langevin Equation

Major Concepts Kramers Turnover

Major Concepts. Brownian Motion & More. Chemical Kinetics Master equation & Detailed Balance Relaxation rate & Inverse Phenomenological Rate

Linear Response and Onsager Reciprocal Relations

Non-equilibrium phenomena and fluctuation relations

Lecture 6: Irreversible Processes

Collective Effects. Equilibrium and Nonequilibrium Physics

Collective Effects. Equilibrium and Nonequilibrium Physics

Non equilibrium thermodynamics: foundations, scope, and extension to the meso scale. Miguel Rubi

F(t) equilibrium under H 0

Stochastic equations for thermodynamics

TSTC Lectures: Theoretical & Computational Chemistry

Introduction to a few basic concepts in thermoelectricity

12. MHD Approximation.

G : Statistical Mechanics

Irreversibility and the arrow of time in a quenched quantum system. Eric Lutz Department of Physics University of Erlangen-Nuremberg

Effective Temperatures in Driven Systems near Jamming

COARSE-GRAINING AND THERMODYNAMICS IN FAR-FROM-EQUILIBRIUM SYSTEMS

Physics 562: Statistical Mechanics Spring 2003, James P. Sethna Homework 5, due Wednesday, April 2 Latest revision: April 4, 2003, 8:53 am

CHAPTER V. Brownian motion. V.1 Langevin dynamics

This is a Gaussian probability centered around m = 0 (the most probable and mean position is the origin) and the mean square displacement m 2 = n,or

Brownian motion and the Central Limit Theorem

Symmetry of the Dielectric Tensor

5.74 Introductory Quantum Mechanics II

Semiclassical Electron Transport

Symmetry of the linearized Boltzmann equation: Entropy production and Onsager-Casimir relation

Preface. Preface to the Third Edition. Preface to the Second Edition. Preface to the First Edition. 1 Introduction 1

Topics in Nonequilibrium Physics. Nicolas Borghini

t = no of steps of length s

BAE 820 Physical Principles of Environmental Systems

Linear Response in Classical Physics

The First Principle Calculation of Green Kubo Formula with the Two-Time Ensemble Technique

Analysis of MD Results Using Statistical Mechanics Methods. Molecular Modeling

Phase Equilibria and Molecular Solutions Jan G. Korvink and Evgenii Rudnyi IMTEK Albert Ludwig University Freiburg, Germany

1 The fundamental equation of equilibrium statistical mechanics. 3 General overview on the method of ensembles 10

The Phase Field Method

Noise, AFMs, and Nanomechanical Biosensors

MD Thermodynamics. Lecture 12 3/26/18. Harvard SEAS AP 275 Atomistic Modeling of Materials Boris Kozinsky

Derivation of the GENERIC form of nonequilibrium thermodynamics from a statistical optimization principle

Onsager theory: overview

Molecular Dynamics and Accelerated Molecular Dynamics

Linear-response theory and the fluctuation-dissipation theorem: An executive summary

Thermodynamics for small devices: From fluctuation relations to stochastic efficiencies. Massimiliano Esposito

Organization of NAMD Tutorial Files

macroscopic view (phenomenological) microscopic view (atomistic) computing reaction rate rate of reactions experiments thermodynamics

4. The Green Kubo Relations

Diffusive Transport Enhanced by Thermal Velocity Fluctuations

Collective Effects. Equilibrium and Nonequilibrium Physics

Hydrodynamics. Stefan Flörchinger (Heidelberg) Heidelberg, 3 May 2010

IV. Classical Molecular Dynamics

in order to insure that the Liouville equation for f(?; t) is still valid. These equations of motion will give rise to a distribution function f(?; t)

1 Introduction to Governing Equations 2 1a Methodology... 2

1 What is energy?

Diffusion in multicomponent solids. Anton Van der Ven Department of Materials Science and Engineering University of Michigan Ann Arbor, MI

2. Molecules in Motion

Winter College on Optics and Energy February Photophysics for photovoltaics. G. Lanzani CNST of Milano Italy

ONSAGER S VARIATIONAL PRINCIPLE AND ITS APPLICATIONS. Abstract

macroscopic view (phenomenological) microscopic view (atomistic) computing reaction rate rate of reactions experiments thermodynamics

Quantum measurement theory and micro-macro consistency in nonequilibrium statistical mechanics

Measures of irreversibility in quantum phase space

Tutorial School on Fluid Dynamics: Aspects of Turbulence Session I: Refresher Material Instructor: James Wallace

NMR Dynamics and Relaxation

Continuum Mechanics Fundamentals

Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences

arxiv: v1 [cond-mat.stat-mech] 28 Jul 2015

Hydrodynamics, Thermodynamics, and Mathematics

Thermodynamics and Kinetics

Quantum Molecular Dynamics Basics

NON-EQUILIBRIUM THERMODYNAMICS

Friction Coefficient Analysis of Multicomponent Solute Transport Through Polymer Membranes

Fokker-Planck Equation with Detailed Balance

15.3 The Langevin theory of the Brownian motion

arxiv:physics/ v2 [physics.class-ph] 18 Dec 2006

On the Asymptotic Convergence. of the Transient and Steady State Fluctuation Theorems. Gary Ayton and Denis J. Evans. Research School Of Chemistry

Thermodynamically Coupled Transport in Simple Catalytic Reactions

3.320 Lecture 23 (5/3/05)

Carriers Concentration and Current in Semiconductors

NMR: Formalism & Techniques

Ionization Detectors. Mostly Gaseous Detectors

Mutual diffusion in the ternary mixture of water + methanol + ethanol: Experiments and Molecular Simulation

Thermodynamics of nuclei in thermal contact

Diffusion in the cell

Large deviations of the current in a two-dimensional diffusive system

Linear response theory

12.2 MARCUS THEORY 1 (12.22)

MSE 360 Exam 1 Spring Points Total

Biomolecular hydrodynamics

The Thermodynamics of Nonlinear Bolometers Near Equilibrium

Mass transfer by migration & diffusion (Ch. 4)

Non-Equilibrium Thermodynamics: Foundations and Applications. Lecture 9: Modelling the polymer electrolyte fuel cell

MD simulation: output

Chapter 17.3 Entropy and Spontaneity Objectives Define entropy and examine its statistical nature Predict the sign of entropy changes for phase

Ab Ini'o Molecular Dynamics (MD) Simula?ons

INTRODUCTION TO MODERN THERMODYNAMICS

PHYS 390 Lecture 23 - Photon gas 23-1

Information to energy conversion in an electronic Maxwell s demon and thermodynamics of measurements.

Thermodynamics of diffusion (extracurricular material - not tested)

Collective Effects. Equilibrium and Nonequilibrium Physics


Determination of Statistically Reliable Transport Diffusivities from Molecular Dynamics Simulation

Transcription:

Major Concepts Onsager s Regression Hypothesis Relaxation of a perturbation Regression of fluctuations Fluctuation-Dissipation Theorem Proof of FDT & relation to Onsager s Regression Hypothesis Response Functions Kinetics & TST Phenomenology & Transport C.f. BH Sections 9.1 & 9.2 Entropy Production, Affinities & Onsager Reciprocity Relations The Diffusion Equation (driven by density fluctuations) Cahn-Hillard Equation (density and energy fluctuations) TST & Transport 1

Onsager s Regression Hypothesis Concepts: An equilibrium system has fluctuations An equilibrium system which is instantaneously in an fluctuation looks like a non-equilibrated system that must relax to equilibrium Onsager: The relaxation of macroscopic non-equilibrium disturbances is governed by the same laws as the regression of spontaneous microscopic fluctuations in an equilibrium system. 1968 Nobel Prize in Chemistry But note that Callen & Welton [PRB 83, 34-40 (1951)] proved the FDT for microscopic disturbances TST & Transport 2

Onsager s Regression Hypothesis Spontaneous fluctuations: Relaxation of a disturbance: correlation function Onsager s hypothesis: TST & Transport 3

Onsager s Regression Hypothesis Examples: Velocity autocorrelation function: Relaxation in chemical kinetics: C(t)/C(0) TST & Transport K.M. Solntsev, D. Huppert, N. Agmon, J. Phys. Chem. A 105(2001)5868 4

Onsager s Regression Hypothesis Limiting behavior of the correlation function: Note: TST & Transport 5

Fluctuation Dissipation Theorem Equilibrium average value of a variable A: Given a small (microscopic) disturbance: such that calculate initial value TST & Transport 7

Fluctuation Dissipation Theorem Average value of a dynamical variable A(t): But TST & Transport 8

Fluctuation Dissipation Theorem Average value of A(t): because TST & Transport 9

Result: Fluctuation Dissipation Theorem If ΔH = fa(0) then ΔA (t) = βfc(t) Onsager s regression hypothesis TST & Transport 10

Fluctuation Dissipation Theorem Given a small (microscopic) disturbance: This is equivalent to the Onsager s Regression Hypothesis when the latter is applied to small perturbations. TST & Transport 11

Chemical Kinetics Simple Kinetics Phenomenology Master Equation Detailed Balance 1 E.g.: apparent rate for isomerization : τ rxn = kab + k BA Microscopic Rate Formula Relaxation time Plateau time TST & Transport 13

Rates The rate is: 1 E.g., in the apparent rate for isomerization : τ rxn = k AB + k BA k(0) is the transition state theory rate After an initial relaxation, k(t) plateaus (Chandler): the plateau or saddle time: t s k(t s ) is the rate (and it satisfies the TST Variational Principle) After a further relaxation, k(t) relaxes to 0 Other rate formulas: Miller s flux-flux correlation function Langer s Im F TST & Transport 14

Transition State Theory Objective: Calculate reaction rates Obtain insight on reaction mechanism Eyring, Wigner, Others.. 1. Existence of Born-Oppenheimer V(x) 2. Classical nuclear motions 3. No dynamical recrossings of TST Keck,Marcus,Miller,Truhlar, Others... Extend to phase space Variational Transition State Theory Formal reaction rate formulas Pechukas, Pollak... PODS 2-Dimensional non-recrossing DS Full-Dimensional Non-Recrossing Surfaces Miller, Hernandez developed good action-angle variables at the TS using CVPT/Lie PT to construct semiclassical rates Jaffé, Uzer, Wiggins, Berry, Others... extended to NHIM s, etc (Marcus: Science 256 (1992) 1523) TST & Transport 15

Fluxes, Affinities & Transport Coefficients, I (Barat & Hansen, Section 9.1) Local Thermal Equilibrium (LTE) Allows for separation between mesoscopic subsystems in LTE and nonequilibrium macroscopic variables Defines, e.g., ρ(r,t) and T(r,t) We now aim to construct (Non-Eq) phenomenological evolution equations based on LTE at the mesoscale TST & Transport 17

Fluxes, Affinities & Transport Coefficients, II Suppose a Solution: With conserved quantities, U, and N s solutes Entropy Production, S(U,N s ) Recognize the affinities γ as the S-conjugate variables: $ γ E = S ' & ) % E ( N s $ γ Ns = S ' & ) % N s ( E = 1 T = µ S T Out of equilibrium local fields, ρ S (r,t) and u(r,t) 2 nd Law of thermodynamics implies that differences in affinities drives fluxes: j E j N ( r,t) = L EE γ E ( r,t) + L EN γ N ( r,t) ( r,t) = L NE γ E ( r,t) + L NN γ N ( r,t) TST & Transport 18

Fluxes, Affinities & Transport Coefficients, I The Transport Equation in this Linear Response Regime for solutes are: j E j N ( r,t) = L EE γ E ( r,t) + L EN γ N ( r,t) ( r,t) = L NE γ E ( r,t) + L NN γ N ( r,t) Limits: Constant N Fourier s law for heat conduction j E = λ T with thermal conductivity : λ = L EE T 2 µ = k B T ln ρ Constant T & nearly dilute Fick s Law: j N = D ρ with diffusion constant : D = L NN k B ρ In general, Temperature and Particle gradients can drive each other! The coefficients L ij are the Onsager Coefficients The Onsager Reciprocity Relations simply say that L is diagonal, i.e., that L ij = L ji for all I and j. Diagonal terms capture the usual spread or diffusion of the corresponding property directly TST & Transport 19

The Diffusion Equation, I Mass transport equation: j N = L NN γ N Mass conservation equation (aka Equation of Continuity) without sources or sinks: The general Diffusion Equation: The usual Diffusion Equation: at low solute concentration, γ N = k B ln ρ$ assuming Fick s Law, D = L k & % NN B ρ '& ρ r,t ρ t = j N ( ) t ρ( r,t) t = L NN γ N ( r,t) = D 2 ρ( r,t) TST & Transport 20

The Diffusion Equation, II In the Diffusion Equation: at low solute concentration, γ N = k B ln ρ$ assuming Fick s Law, D = L & NNk B % ρ '& we observed that D is proportional to L NN Is this an accident? No, it is an example of the Fluctuation-Dissipation Theorem we already discussed That is, it arises from the fact that the mobility λ in response to a drift current is related to the Diffusion constant through the Einstein relation, D = λk B T ρ( r,t) t = D 2 ρ( r,t) TST & Transport 21

The Diffusion Equation, III The Diffusion Equation: ρ( r,t) t In Fourier space w.r.t. wave vector k: ( ) ρ k,t Which can be solved for a given BC, e.g., ρ k,0 : ( ) = N S And then inverse Fourier transformed: ρ( r,t) = N S ( 4πDt) 3 / 2 exp r r 0 ' 2Dt % & ( ) 2 t = D 2 ρ( r,t) ( ) = Dk 2 ρ k,t ρ( k,t) = N S exp( k 2 Dt) ( ) * 1 dr r r 3 0 ( ) 2 ρ( r,t) = 2Dt TST & Transport 22