Heterocyclic Chemistry

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Heterocyclic Chemistry Third Edition Thomas L. Gilchrist University of Liverpool 1 Longman

Contents Preface to the third edition Preface to the second edition Preface to the first edition Acknowledgements xii xiii xv xvii 1 Introduction: uses of heterocyclic Compounds Aromatic heterocycles 8 2.1 The common structural types 8 2.1.1 Six-atom, six-7r-electron heterocycles 8 2.1.2 Five-atom, six-7r-electron heterocycles 12 2.1.3 Benzo-fused ring Systems 14 2.1.4 Other fused heterocycles 15 2.2 Some criteria of aromaticity in heterocycles 16 2.2.1 Bond lengths 16 2.2.2 Ring current effects and chemical shifts in 'H NMR spectra 18 2.2.3 Molecular orbitals and delocalization energy 19 2.2.4 Resonance energies 22 2.2.5 Dewar resonance energies and other calculated resonance energies 24 2.2.6 General conclusions 25 2.3 Aromatic character and other types of unsaturated heterocycles 26 2.3.1 Monocyclic Systems that conform to the Hückel rule 26 2.3.2 Other unsaturated heterocycles 28 2.4 Reactivity of heteroaromatic Compounds 29 2.5 Tautomerism of heteroaromatic Compounds 32 Summary 35 Problems 35

vi Contents Nonaromatic heterocycles 38 3.1 Introduction 38 3.2 Bond angle strain 39 3.2.1 Angle strain and bonding in small-ring heterocycles 39 3.2.2 Some consequences otbond angle strain in small rings 41 3.2.3 Angle strain in larger rings 44 3.3 Torsional energy barriers 44 3.3.1 Single bonds 44 3.3.2 Double bonds and partial double bonds 46 3.4 Influence of bond lengths and van der Waals radii: conformational preferences of flexible heterocycles 48 3.4.1 Saturated six-membered heterocycles 48 3.4.2 Four- and five-membered heterocycles 50 3.5 Other types of interaction in saturated heterocycles 51 3.5.1 Through-bond' orbital interactions: the anomeric effect 51 3.5.2 Attractive 'through-space' interactions 56 Summary 57 Problems 58 Ring synthesis 61 4.1 Introduction 61 4.2 Cyclization reactions 62 4.2.1 Reaction types 62 4.2.2 Displacement at saturated carbon 68 4.2.3 Intramolecular nucleophilic addition to carbonyl groups 70 4.2.4 Intramolecular addition of nucleophiles to other double bonds 73 4.2.5 Cyclization on to triple bonds 76 4.2.6 Radical cyclization 79 4.2.7 Carbene and nitrene cyclization 83 4.2.8 Electrocyclic reactions 84 4.3 Cycloaddition reactions 89 4.3.1 Reaction types 89 4.3.2 1,3-Dipolar cycloaddition 91 4.3.3 Hetero-Diels-Alder reactions 106 4.3.4 [2 + 2] Cycloaddition 115 4.3.5 Cheletropic reactions 118 4.3.6 Ene reactions 120 Summary 121 Problems 121

Contents vii Six-memberec 1 ring Compounds with one heteroatom 5.1 Introduction 5.2 Pyridines 5.2.1 5.2.2 5.2.3 5.3 5.4 5.5 Introduction Ring synthesis General features of the chemistry of pyridines 5.2.4 Basicity 5.2.5 Alkylation, acylation and complexation on nitrogen 5.2.6 Electrophilic Substitution at carbon 5.2.7 Nucleophilic Substitution 5.2.8 Didehydropyridines (pyridynes) 5.2.9 Radical Substitution 5.2.10 Palladium-catalysed coupling reactions and Heck reactions 5.2.11 Reduction of pyridines and pyridinium salts: dihydropyridines 5.2.12 Photochemical isomerization 5.2.13 5.2.14 5.2.15 5.2.16 Pyridine iv-oxides, 7V-imides and N-ylides Hydroxy- and aminopyridines Alkyl- and alkenylpyridines Pyridinecarboxylic acids Quinolines and isoquinolines 5.3.1 5.3.2 5.3.3 5.3.4 5.3.5 5.3.6 5.3.7 5.3.8 5.3.9 5.3.10 5.3.11 Introduction Synthesis of quinolines Synthesis of isoquinolines General features of the chemistry of quinolines and isoquinolines Electrophilic Substitution Nucleophilic Substitution Nucleophilic addition Oxidative cleavage JV-Oxides and JV-imides Properties of substituents Cyanine dyes Other fused pyridines 5.4.1 5.4.2 5.4.3 5.4.4 Quinolizines Acridines Phenanthridines Indolizines Ring Systems containing oxygen 5.5.1 5.5.2 5.5.3 5.5.4 Pyrylium salts 2i/-Pyran-2-ones 4iJ-Pyran-4-ones Benzo-fused Systems 125 125 125 125 127 133 136 137 138 142 147 149 149 150 152 153 154 156 158 158 158 159 162 164 165 167 168 169 170 170 171 172 172 173 175 175 176 176 178 181 183

viii Contents Summary 186 Problems 187 Five-membered ring Compounds with one heteroatom 192 6.1 Introduction 192 6.2 Pyrroles 193 6.2.1 Introduction 193 6.2.2 Ring synthesis 194 6.2.3 Acidity and metallation reactions 197 6.2.4 Substitution at nitrogen 197 6.2.5 Substitution at carbon 198 6.2.6 Addition and cycloaddition reactions 204 6.2.7 Properties of substituted pyrroles 205 6.2.8 Porphyrins and related pyrrolic natural products 207 6.3 Furans 208 6.3.1 Introduction 208 6.3.2 Ring synthesis 210 6.3.3 Reactions with electrophiles 212 6.3.4 Radical Substitution and nucleophilic Substitution 216 6.3.5 Cycloaddition reactions 216 6.3.6 Ring-cleavage reactions 219 6.3.7 Some properties of substituted furans 221 6.4 Thiophenes 221 6.4.1 Introduction 221 6.4.2 Ring synthesis 222 6.4.3 Electrophilic Substitution 223 6.4.4 Nucleophilic and radical Substitution 226 6.4.5 Addition and cycloaddition reactions 228 6.4.6 Reductive desulfurization 228 6.4.7 Photochemical isomerization 229 6.4.8 Properties of some substituted thiophenes 230 6.5 Indoles and related Compounds 231 6.5.1 Introduction 231 6.5.2 Ring synthesis 233 6.5.3 Reaction with electrophiles 237 6.5.4 Radical Substitution and coupling reactions 241 6.5.5 Oxidation and reduction 241 6.5.6 Properties of some substituted indoles 243 6.6 Other benzo[a]-fused heterocycles 244 6.6.1 Benzofurans 244 6.6.2 Benzo[ft]thiophenes 246 6.6.3 Carbazoles 248 6.7 Benzo[c]-fused heterocycles 249

Contents ix 6.7.1 Introduction 6.7.2 Synthesis 6.7.3 Chemical properties 6.7.4 Phthalocyanines Summary Problems 249 249 250 251 252 253 Six-membered ring Compounds with two or more heteroatoms 7.1 Introduction 7.2 General aspects of the chemistry of diazines, triazines and tetrazines 7.3 Pyrimidines and purines 7.3.1 Introduction 7.3.2 Synthesis of pyrimidines 7.3.3 Synthesis of purines 7.3.4 Reactions of pyrimidines 7.3.5 Reactions of purines 7.3.6 Pyrimidines and purines in nucleic acids 7.4 Other diazines, triazines and tetrazines 7.4.1 Introduction 7.4.2 Methods of ring synthesis 7.4.3 Chemical properties 7.5 Some fused ring Systems 7.5.1 Introduction 7.5.2 Ring synthesis 7.5.3 Chemical properties 7.6 Oxazines and thiazines 7.6.1 Introduction 7.6.2 1,3-Oxazines 7.6.3 Phenothiazines Summary Problems 257 257 257 261 261 264 266 268 274 275 276 276 278 280 284 284 285 286 288 288 289 291 292 293 Five-membered ring Compounds with two or more heteroatoms 8.1 Introduction 8.2 Imidazoles 8.2.1 Introduction 8.2.2 Ring synthesis 8.2.3 Reactions 8.3 Pyrazoles, triazoles and tetrazoles 8.3.1 Introduction 8.3.2 Ring synthesis 8.3.3 Substitution reactions 295 295 298 298 299 301 304 304 305 308

x Contents 8.3.4 Ring cleavage 311 8.3.5 Azoles as orf/io-directing groups for metallation 314 8.4 Benzodiazoles and benzotriazoles 315 8.5 Oxazoles and thiazoles and their benzo derivatives 319 8.5.1 Introduction 319 8.5.2 Ring synthesis 320 8.5.3 Chemical properties 322 8.6 Isoxazoles, isothiazoles and their benzo derivatives 328 8.6.1 Introduction 328 8.6.2 Ring synthesis 329 8.6.3 Chemical properties 332 8.7 Oxadiazoles, thiadiazoles and related Systems 335 8.7.1 Introduction 335 8.7.2 Ring synthesis 336 8.7.3 Chemical properties 336 8.8 Betaines and mesoionic Compounds 340 8.8.1 AT-Oxides and AT-imides 341 8.8.2 Mesoionic Compounds 341 Summary Problems 344 345 Three- and four-membered ring Compounds 9.1 Introduction 9.2 Aziridines 9.2.1 Introduction 9.2.2 Ring synthesis 9.2.3 Functionalization at nitrogen 9.2.4 Ring-opening reactions 9.2.5 Fragmentation reactions 9.3 Oxiranes 9.3.1 Introduction 9.3.2 Ring synthesis 9.3.3 Reactions 9.4 Thiiranes 9.5 2/f-Azirines 9.6 Diaziridines and 3//-diazirines 9.7 Oxaziridines 9.8 Azetidines and azetidinones 9.9 Other four-membered heterocycles 9.9.1 Oxetanes 9.9.2 Thietanes 9.9.3 Some unsaturated four-membered rings Summary Problems 350 350 350 350 351 352 353 354 354 354 355 357 359 360 363 364 365 367 367 368 369 370 371

Contents xi 10 Seven-membered ring Compounds 373 10.1 Introduction 373 10.2 Azepines 374 10.3 Oxepins and thiepins 376 10.4 Diazepines and benzodiazepines 379 Summary 381 Problems 382 11 Nomenclature 384 11.1 Introduction 384 11.2 Trivial names of common ring Systems 385 11.3 Systematic (Hantzsch-Widman) nomenclature for monocyclic Compounds 387 11.4 The naming of fused ring Systems 389 11.5 Replacement nomenclature 392 Summary 392 Problems 393 Answers and references to selected problems 394 Index 400