Mathematics and Signal Processing for Biomechanics

Transcription

1 KAAP686 Mathematics and Signal Processing for Biomechanics More on Matrices Now we discuss the topic of matrix division and apply this idea to solve a system of linear equations. We will define the inverse* of a matrix, for example B -1 =inverse of B. Then, instead of dividing one matrix by another (C=A/B), w we will multiply by the inverse (C=B -1 A). *It is really the multiplicative inverse of a matrix. A matrix also has an additive inverse, which is its negative. However, it is customary to say inverse instead of multiplicative inverse. Only a mathematician would talk about the additive inverse of a matrix. 1. Matrix inverse A is the inverse of B (and vice versa) iff AB = BA = I Example: A=[1 2; 3 5] B=[-5 2; 3-1]. Show AB = I and BA = I. Not all matrices have inverses: for example the zero matrix, and the matrix [1 0; 0 0]. Matrix with no inverse is noninvertible or singular. Symbol for inverse: A -1. If A has an inverse, it has only 1 inverse. Set up eqn for inverse of a 2x2 matrix, then show that it ends up being 4 eqns in 4 unknowns. A=[a b; c d]; A -1 =[e f; g h]; A A -1 = I Then show that for 2x2 matrix, A -1 = (1/detA)*[d -b; -c a] is true, because this solution to the inverse makes A A -1 = I. Use Matlab to do example: >> A=[2 1 3;2 1 1;4 5 1] >> B=inv(A) >> C=A*B >> D=B*A Inverses and solution to a linear system of equations The solution to the system Ax = b, where A is a matrix and x, b are vectors, is x = A -1 b. Example: Same equations as above, but now define >>b=[6; -12; 3] >> x=inv(a)*b and check by doing >> c=a*x Inverse of product of matrices If A, B are invertible, so is AB, and inv(ab) = inv(b)*inv(a) 2. Special Matrices & Additional Properties

2 Diagonal matrix: square matrix with off-diagonal elements = 0. Transpose of a matrix: denoted A T or A. Interchange the rows and columns. Transpose of n-bym matrix is m-by-n. Properties of transposes: (A T ) T = A (AB) T = B T A T (A T ) -1 = (A -1 ) T Symmetric matrices: A is symmetric if A = A T 3. Matrices as maps [In notes below, when I refer to vector (1 0) or (a c), etc., I mean the corresponding column vectors, but I write them (1 0) because it s easier to write.] 2x2 matrix = linear transformation = mapping from x-y plane into another x-y plane (call it x -y if you wish). The linear 2x2 mapping sends straight lines into straight lines, parallel lines into parallel lines, but generally does not preserve angles between lines, which means lines at right angles in the starting plane may not be mapped into lines at right angles in the new plane. Consider and show how vectors (1,0) and (0,1) get mapped to vectors (a,c) and (b,d) by the transformation A whose matrix is A=[a b; c d]. Unit square mapped into parallelogram; its area =side x side x sinθ which is computed by taking cross product of the 2 vectors (as if they were 3D vectors with z coordinates = 0). The cross product of (a,c,0) and (b,d,0) is found by taking determinant of 3x3 matrix with rows (i, j, k); (a, c, 0); (b, d, 0). This gives vector 0i+0j+ (ad-bc)k, whose length is (ad-bc). This length is the area of the parallelogram. So the original unit square gets mapped into a parallelogram with area = ad-bc = det(a). det(a) is the area magnification factor for the transformation A. If det(a) < 0, then the unit square in the original x-y plane gets flipped by the transformation, and the direction of the cross product of (a c) with (b d) is opposite to the direction of the cross product of (1 0) with (0 1). If det(a) = 0 then the whole x-y plane gets mapped into a line (so the area of the original unit square becomes 0 after transformation). Inverse of the A matrix (A -1 ) is a matrix that undoes what A does. Therefore A -1 acting on (a c) maps it to (1,0), and A -1 maps (b d) to (0 1). If det(a)=0, which means whole plane gets mapped into a line, then many points are being mapped into same point, and there s no way to go backwards because a given point on the line in the new plane could have come from an infinite number of points in the starting plane, and there s no way to tell which one to go back to. This explains, in terms of mapping, why a matrix with det(a)=0 does not have an inverse: because there s no way to undo the mapping corresponding to A. 4. Uses of matrices in biomechanics 4a. Rotations.

3 Rotations are covered in a separate set of notes. 4b. Statistics. The covariance matrix arises when analyzing multidimensional data. An example of multi- (two-)dimensional data is the center of pressure (x- and y-coordinates) measured as a function of time. Another example of multidimensional data is the EMG activity from several muscles measured at the same time, such as leg muscles during walking. The covariance matrix measures how much the variables vary in synchrony with one another. Analysis of the covariance matrix can sometimes give deeper insight into the data. For example, the covariance matrix is used in principle component analysis (which we will not discuss here). If there are 2 variables, the covariance matrix is 2x2; if there are 6 variables, the covariance matrix is 6x6. The covariance matrix for two-dimensional data is measured at n time points [var(x) cov(x,y)] Cov(x,y)= [cov(x,y) var(y)] where var(x) = (1/(n-1)) Sum(x i -x bar ) 2 var(y) = (1/(n-1)) Sum(y i -y bar ) 2 cov(x,y) = (1/(n-1)) Sum(x i -x bar )(y i -y bar ). Cov(x, y) = var(x) cov(x, y) cov(y, x) var(y) where var(x) = 1 n n 1 (x i x ) 2 i=1 var(y) = 1 n n 1 (y i y ) 2 i=1 cov(x, y) = cov(y, x) = 1 n n 1 (x i x ) (y i y ) The diagonal elements of the covariance matrix are just the usual variances of x(t) and of y(t). The covariance matrix is symmetric. If x(t) and y(t) are the coordinates of the body s center of mass during standing, then the covariance matrix can be useful for understanding normal and abnormal balance. If there are m variables and n measurement times, arrange the data in an array X with m columns and n rows. Then the covariance matrix can be computed by array multiplication: Cov(X) = (1/(n-1)) X T X Cov(X) = 1 n 1 XT X i=1

4 Since we have multiplied (m n) (n m), the result is (m m). (Remember that when the dimensions of multiplied arrays are written this way, the inner dimensions, n and n in this case, must match each other, and the resulting matrix has dimensions given by the outer dimensions.) 4c. Mechanics The deformation of an object, or of a little cube of material within that object, in response to applied forces, can be represented by a 3x3 matrix (i.e. a 2-dimensional array) called the strain tensor. It turns out that this matrix is symmetric. Forces on an object can be represented by another symmetric 3x3 matrix called the stress tensor. For many materials, including biological materials, the relation between stress (applied force) and strain (deformation) is linear, as long as the applied force is not too great. In this linear range, stress and strain are related to one another by a 4-dimensional array, the 3x3x3x3 elasticity tensor, which represents the properties of the material. For convenience, the strain and stress tensors (which have 6 independent elements each, since they are symmetric 3x3 matrices) are sometimes represented as 6-element vectors. This allows the elasticity tensor to be represented as a 6x6 matrix. Take a course in solid mechanics to understand these ideas more fully. 4d. Force Plate Calibration A force plate is a black box with six inputs (3 forces, 3 moments) and six outputs. On some force plates, including all older models, the outputs are voltages. (Newer models may have digital outputs which are numbers with units of N or N-m.) The user measures the outputs and wants to know the inputs. The ideal force plate has one output uniquely associated with each input, and a linear input/output relation for each such channel. In other words, the ideal force plate is linear and has no crosstalk. Actual force plates are not ideal. Manufacturers work hard to eliminate nonlinearity. Nonetheless, nonlinearities are sometimes noticeable, especially if a force plate has been damaged, is mounted incorrectly, or has debris in the mounting chamber. Crosstalk describes the situation where the output signal for one input also contains components from other inputs. For example, the output signal for Fx might be slightly corrupted by contributions from the other inputs. If the system is linear, each output signal is a (different) linear combination of all the inputs: Channel 1 (volts) = V Fx = a 11 F x + a 12 F y + a 13 F z + a 14 M x + a 15 M y + a 16 M z, Channel 2 (volts) = V Fy = a 21 F x + a 22 F y + a 23 F z + a 24 M x + a 25 M y + a 26 M z, and so on. We can write this with vectors and a matrix: VFx a11 a12 a13 a14 a15 a16 Fx V Fy F y a a a a a a V Fz a31 a32 a33 a34 a35 a 36 F = x VMx a41 a42 a43 a44 a45 a46 M x V a My 51 a52 a53 a54 a55 a 56 M y V a Mz 61 a62 a63 a64 a65 a 66 M z which we write compactly as V = A F. An ideal forceplate with no crosstalk will have values of zero for all off-diagonal matrix elements. The user can find the individual forces and moments, even if there is crosstalk, if the elements of A are known. V = A F (from above)

5 A -1 V = (A -1 A) F (pre-multiply by inverse of A on both sides) A -1 V = I F (I=identity matrix) F = A -1 V (desired solution: the vector of forces and moments) In other words, to get the individual forces and moments, multiply the inverse of A by the voltage vector. Newer force plates do this matrix multiplication internally, and provide voltage outputs that are pure (free of crosstalk) and require only scalar multiplication to get the forces and moments. On older models, the user must do the matrix multiplication, using values for the elements of A or A -1 provided by the manufacturer. Example from AMTI forceplate, model OR , s/n 3233, assuming 10 V excitation. A= (Values are μv/n in columns 1-3 and μv/(n-m) in columns 4-6.) See Appendix A of Vicon_workstation_reference.pdf in reserve section of course web site. (File also available (as of ) at 4e. Change of Coordinate System Often we have data in one coordinate system and we need to convert it to another coordinate system. For example, we might obtain the location of the center of pressure in force place coordinates (a coordinate system local to the force plate, set by the manufacturer) and we need to convert it to laboratory coordinates. The diagram shows the two coordinate systems. Vector r denote the origin of system 1 in the coordinates of system 2. The unit vectors of coordinate system 1 are u 1 1, u 2 1, and u 3 1. The unit vectors of coordinate system 2 are u 1 2, u 2 2,

6 and u 2 3. The angle between unit vectors u 1 i (in system 1) and u 2 j (in system 2) is θ ij. We use these angles to create the direction cosines matrix R as follows: cos θ 11 cos θ 12 cos θ 13 R = cos θ 21 cos θ 22 cos θ 23 cos θ 31 cos θ 32 cos θ 33 A location in system 1 coordinates is denoted x 1 = y 1. The same location expressed in z 1 x 2 system 2 coordinates is x 2 = y 2. The two are related by a rotation and a translation: z 2 x 2 = R x 1 + r Consider, for example, the figure below, which was modified from a force plate manual (retrieved from It shows the force plate coordinate system (subscript f), and the lab coordinate system (subscript L), which is offset and rotated. If we know the center of pressure location in force plate coordinates, COP f = x f y f, we will want to convert it to lab coordinates. In this case, the vector r, which describes z f 20 the origin of the force plate system in the lab system coordinates, is r = 30. The angles 0.25 θ ij.between unit vector i in system 1 and unit vector j in system 2 are θ 11 (between x f and x L )=180, θ 12 (between x f and y L )= 90, θ 13 = 90, θ 21 = 90, θ 22 (between y f and y L )= 0, θ 23 = 90, θ 31 = 90, θ 32 = 90, θ 33 = 180. Therefore the direction cosines matrix R is R = The center of pressure location in lab coordinates is 1 COP L = R COP f + r x 1

7 Note that the equation above for transforming locations is NOT correct for transforming forces or torques from one coordinate system to another. This is because force vectors and torque vectors are not anchored to one spot, and so are not affected by translations of the coordinate system. They are affected by rotations of the coordinate system, however. The equation for transforming a force vector from system1 to system 2 coordinates is f 2 = R f 1 where f 1 and f 2 are the force vector expressed in the two coordinate systems, and R is the matrix of direction cosines given above. The same equation can be used to transform torque vectors. Copyright 2013 William C. Rose