Chapter 5 Biological Concepts

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1 Chapter 5 Biological Concepts Karleskint Turner Small

2 Key Concepts All living organisms are composed of cells. Cells can be either prokaryotic or eukaryotic Cells produce new cells by the process of cell division Evolution is the process by which the genetic composition of populations of organisms changes over time Natural selection favors the survival and reproduction of those organisms that possess variations that are best suited to their environment

3 Key Concepts A species is a group of physically similar, potentially interbreeding organisms that share a gene pool, are reproductively isolated from other such groups, and are able to produce viable offspring. The binomial system of nomenclature uses two words, the genus and the species epithet, to identify an organism.

4 Key Concepts Most biologists classify organisms into one of three domains, categories that reflect theories about evolutionary relationships. Phylogenetic trees and cladograms indicate evolutionary relationships among groups of organisms

5 What makes you a Human? IQ#1: What are humans composed of???

6 CELLS: Fundamental Unit for Life and Death.

7 Cells All cells are capable of: metabolism Growth (mitosis)- cells grow and replicate ex. Skin cells regrow. Reproduction (meiosis)- egg and sperm cells combine to create a new cell an offspring

8 Types of Cells Prokaryotic cells Eukaryotic cells

9 Prokaryotic Cell Architecture Prokaryotic Diversity Prokaryotic cells are diverse and classified in two domains: Archaea (Archaebacteria) and Bacteria (Eubacteria) Prokaryotes come in all shapes and sizes, and all are single cell organisms They can live in social groups, and form chains, clusters or films. Ex. Biofilm in your bath tub

10 Prokaryotes Prokaryotes: Contain a cell wall made of peptidoglycan Lack internal membranes membrane bound organelles Contain a primitive cytoskeleton Move simply through their flagellum

11 IQ#2 Antibiotic medicine kill bacterial cells Scenario: You have a flu which is caused by a virus, however you take an antibiotic to help cure yourself what do you think happens?

12 Common Misconceptions DO you know the difference between a virus and a bacterial cell? Virus are even smaller than bacteria! Viruses require a living host to multiply. Otherwise they cant survive. Therefore, you can conclude that virus are asleep until they meet a host. When a virus enters your body, it hijacks some of your cells and takes over the cell machinery, redirecting it to produce the virus.

13 Prokaryotic genetic Features DNA storage, structure and replication for division are distinguishing features for prokaryotic cells Prokaryotes: contain a circular nucleoid where DNA is packed No organelles Small amounts of DNA Some have plasmids that contain extra DNA Binary fission is the process through which cells divide A complete copy of DNA is passed on to a daughter cell Genetic information can be shared between organism's aka bacteria can have sex

14 IQ#3 Are Viruses prokaryotes or eukaryotes? Can you explain why?

15 3 points learned Reflection 3 points confused

16 Organelles Nucleus and ribosomes Nucleus: contains the cell s DNA and acts as the control center Ribosomes endoplasmic reticulum rough ER smooth ER

17 Organelles Golgi apparatus lysosomes Vacuoles chloroplasts mitochondria Flagella Cilia

18 Animal Cell Organelles

19 CYTOSKELETON Structurally supports, imparts shape to cell; moves cell and its components microtubules microfilaments intermediate filaments nuclear membrane nucleolus DNA in nucleoplasm NUCLEUS Keeps DNA and its transcription into RNA away from potentially damaging reactions in cytoplasm MITOCHONDRION Energy powerhouse; produces much ATP by aerobic respiration CENTRIOLES Special centers that produce and organize microtubules CELL MEMBRANE Selectively controls the kinds and amounts of substances moving into and out of cell; helps maintain cytoplasmic volume, composition ROUGH ER Modifies new polypeptide chains SMOOTH ER Diverse roles; e. g., makes lipids, degrades fats, inactivates toxins GOLGI BODY Modifies, sorts, ships proteins and lipids for export or for insertion into cell membranes LYSOSOME Digests, recycles materials Figure 5-7b p102

20 Plant Cell Organelles

21 CYTOSKELETON Structurally supports, imparts shape to cell; moves cell and its components CELL WALL Protects, structurally supports cell microtubules microfilaments intermediate filaments (not shown) MITOCHONDRION Energy powerhouse; produces much ATP by aerobic respiration CELL MEMBRANE Selectively controls the kinds and amounts of substances moving into and out of cell; helps maintain cytoplasmic volume, composition CHLOROPLAST Specializes in photosynthesis CENTRAL VACUOLE Increases cell surface area, stores metabolic wastes LYSOSOME-LIKE VESICLE Digests, recycles materials nuclear membrane nucleolus DNA in nucleoplasm NUCLEUS Keeps DNA and its transcription into RNA away from potentially damaging reactions in cytoplasm ROUGH ER Modifies new polypeptide chains SMOOTH ER Diverse roles; e. g., makes lipids, degrades fats, inactivates toxins GOLGI BODY Modifies, sorts, ships proteins and lipids for export or for insertion into cell membranes Figure 5-7a p102

22 Energy Transfer in Cells Photosynthesis low-energy molecules combine to form highenergy food molecules chloroplasts

23 Two outer membranes Thylakoids (inner membrane system folded into flattened disks) Figure 5-10a p105

24 Energy Transfer in Cells

25 Sun O 2 Glucose (energy-rich) Algae and phytoplankton (autotrophs) Animals (heterotrophs) Seagrass and seaweed (autotrophs) PHOTOSYNTHESIS CELLULAR RESPIRATION CO 2 + H 2 O (energy-poor) Figure 5-9 p104

26 Energy Transfer in Cells Cellular respiration releases energy from food molecules most occurs within mitochondria food molecules are broken down to create ATP and release CO 2 as a waste product

27 Outer membrane Outer compartment Inner compartment Inner membrane Figure 5-10b p105

28 Cellular Reproduction Cell division in prokaryotes single chromosome binary fission

29 Chromosome Chromosome is duplicated Two new cells (a) Prokaryote Figure 5-11a p106

30 Cellular Reproduction Cell division in eukaryotes Mitosis Cytokinesis

31 Chromosomes separating Chromosomes (b) Eukaryote Two new nuclei Figure 5-11b p106

32 Levels of Organization cells are grouped into tissues different tissues combine into organs groups of organs make up organ systems

33 a cell Smallest unit that can live and reproduce on its own or as part of a multicelled organism. It has an outer membrane, DNA, and other components. Figure 5-12a p107

34 b tissue Structural unit of certain types and proportions of cells interacting in some task. Many cells ( white ) made this bone tissue from their own secretions. Figure 5-12b p107

35 c organ Structural unit of two or more tissues interacting in some task. A parrotfish eye is a sensory organ used in vision. Figure 5-12c p107

36 d organ system Organs interacting physically, chemically, or both in some task. Parrotfish skin is an integumentary system with tissue layers, organs such as glands, and other parts. Figure 5-12d p107

37 e multicelled organism Individual made of different types of cells. Cells of most organisms, including this Red Sea parrotfish, are organized as tissues, organs, and organ systems. Figure 5-12e p107

38 3D ANIMATION: Tour of an Animal Cell

39 3D ANIMATION: Photosynthesis Bio Experience 3D

40 3D ANIMATION: Mitosis

41 ANIMATION: Common eukaryotic organelles To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

42 ANIMATED FIGURE: Flagella structure To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

43 ANIMATED FIGURE: Structure of a mitochondrion To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

44 INTERACTION: Structure of a chloroplast To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

45 INTERACTION: Structure of a mitochondrion To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

46 ANIMATION: Sites of photosynthesis To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

47 ANIMATED FIGURE: Overview of aerobic respiration To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

48 ANIMATED FIGURE: Prokaryotic fission To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

49 ANIMATED FIGURE: Typical prokaryotic cell To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

50 ANIMATION: Generalized animal cell

51 ANIMATION: Generalized plant cell

52 Evolution and Natural Selection Evolution the process by which populations of organisms change over time Evolutionary biology investigates: how and when organisms evolved what role the environment plays in determining the characteristics of organisms that can live in a given area

53 Darwin and the Theory for Evolution Voyage of discovery Darwin traveled on the HMS Beagle for 5 years, beginning in 1831 Darwin was influenced by Charles Lyell and other geologists who concluded that: since geological change is slow and continuous, the earth is very old slow and subtle changes become substantial when they continue for centuries/millennia

54 Darwin and the Theory for Evolution Formulating a theory for evolution Darwin was inspired by Thomas Malthus Darwin developed his hypothesis evolution by natural selection Published On the Origin of Species by Means of Natural Selection

55 Darwin and the Theory for Evolution Theory of evolution by natural selection artificial selection similar process was occurring in nature? natural selection favors survival and reproduction of those organisms best suited to their environment

56 Darwin and the Theory for Evolution Four basic premises of Darwin s theory 1. All organisms produce more offspring than can possibly survive to reproduce. 2. Variation in inherited traits 3. Resources are limited 4. Traits that make individuals better adapted to their environment are more successful, and pass on those traits to their offspring.

57 Genes and Natural Selection Modern evolutionary theory Darwin s 1858 idea refined by modern genetics genes produce traits can exist in alleles the offspring receives 1 allele for a trait from each parent, producing many possible combinations

58 a A pair of homologous chromosomes, each in the unduplicated state (most often, one from a male parent and its partner from a female parent) b c A pair of alleles (each being a certain molecular form of a gene) on a pair of homologous chromosomes Three genes; regions of DNA that code for specific proteins. Figure 5-15 p110

59 Genes and Natural Selection Role of reproduction in asexual reproduction, offspring are clones variation results from mutation only

60 ASEXUAL REPRODUCTION Figure 5-16a p111

61 Genes and Natural Selection Role of reproduction in sexual reproduction, chromosomes from 2 parents are combined

62 Fertilized egg Sperm Egg SEXUAL REPRODUCTION Figure 5-16b p111

63 Genes and Natural Selection Role of reproduction meiosis forms haploid cells called gametes

64 Genes and Natural Selection Population genetics Organisms adapt to survive ability to adapt is limited by the gene pool Only individuals that have combinations of genes and alleles that allow adaptations to their surroundings are likely to survive and reproduce Reproduction is success

65 Evolution of New Species Typological definition of species based on morphology

66 Evolution of New Species Modern species definition a species is one or more populations of potentially interbreeding organisms that are reproductively isolated from other such groups reproductive isolation: members of a different species are not in the same place at the same time or are physically incapable of breeding, so genes from different species are not mixed

67 Evolution of New Species Modern species definition isolating mechanisms that prevent fertilization habitat isolation anatomical isolation behavioral isolation temporal isolation biochemical isolation

68 Evolution of New Species Post fertilization isolating mechanisms incompatible genes or biochemical differences the hybrid offspring may survive but be infertile or weak

69 Evolution of New Species Allopatric speciation

70 Single population of spotted cowry (ancestral species) Figure 5-19a p114

71 Species B (measled cowry) Species A (Little deer cowry) Figure 5-19b p114

72 3D ANIMATION: Meiosis

73 ANIMATED FIGURE: Genetic terms To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

74 ANIMATED FIGURE: Reproductive isolating mechanisms To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

75 ANIMATION: Models of speciation To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

76 ANIMATED FIGURE: Allopatric speciation on an archipelago To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

77 Classification: Bringing Order to Diversity Linnaeus and the binomial system

78 Classification: Bringing Order to Diversity Taxonomic categories Early schemes of classification all living things were classified into 1 of 2 kingdoms, Animalia and Plantae, until 1960s

79 Classification: Bringing Order to Diversity Modern classification major categories: domain, kingdom, phylum, class, order, family, genus, and species domains: Archaea, Eubacteria, Eukarya kingdoms: Eukarya contains 3 kingdoms, Fungi, Plantae and Animalia protists: eukaryotic organisms that do not fit the definition of animal, plant or fungus

80 Classification: Bringing Order to Diversity Modern classification

81 Bacteria Archaea Protista Plantae Protista Animalia Fungi Common ancestor of all eukaryotes Common ancestor of all living organisms Figure 5-22 p116

82 Classification: Bringing Order to Diversity Phylogeny: phylogenetic tree phenetics cladistics

83 Lungfishes Amphibians Turtles Lizards, snakes Tuataras Crocodiles Birds Mammals Coelacanths Bony fishes Cartilaginous fishes Lampreys Hagfish Figure 5-24a p119

84 Hagfish Shark Sea turtle Seal Hair, mammary glands 4 Limbs Jaws Common vertebrate ancestor Figure 5-24b p119

85 ANIMATED FIGURE: Classification systems To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

86 ANIMATED FIGURE: Interpreting a cladogram To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE

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