Inverse Langevin approach to time-series data analysis
|
|
- Willis Sparks
- 6 years ago
- Views:
Transcription
1 Inverse Langevin approach to time-series data analysis Fábio Macêdo Mendes Anníbal Dias Figueiredo Neto Universidade de Brasília Saratoga Springs, MaxEnt 2007
2 Outline 1 Motivation 2
3 Outline 1 Motivation 2
4 Classic Brownian motion Einstein: drunkard walk (Smoluchowski controversy) ) Lots of Brownian motions all around: physics, finance, communication etc. Random Gaussian increments (SDE s Wanier, Itô) dx = m(x; t) dt + σ(x; t) db
5 Langevin dynamics We must retain Newtonian physics: expand the state dv = a(x, v; t) dt + D(x, v; t) db dx = v dt rich set of solutions from simple equations: linear, exponential, oscillatory, etc Similar results (classic Brownian)
6 Outline 1 Motivation 2
7 What we tackle (work in progress) Wanier noise db = β dt: Fokker-Planck/forward Kolmogorov equation. (Brownian motion) Non-analytic noises, Levy, and others: Kramer-Moyal equation. (gas of rigid spheres)
8 Questions What the drift and the noise?
9 Questions What the drift and the noise? Is it Fokker-Planck or Kramer-Moyal?
10 Questions What the drift and the noise? Is it Fokker-Planck or Kramer-Moyal? Can we compare Fokker-Planck to Kramer-Moyal models?
11 Outline 1 Motivation 2
12 Markov Chain
13 Use Bayes theorem... Likelihood (µ: measurement noise, w: hidden state, η, θ: parameters of interest) p(η y) = 1 p( y) p(η)p( y η) p( y η) = d w dµ dθ p(η, θ)p(µ)p( y w, µ)p( w η, θ) Similar thing for p(θ y)
14 Outline 1 Motivation 2
15 Exactly soluble propagators A Markov process is characterized by its propagator p(w 0, w 1,..., w N ) = p(w 0 )p(w 1 w 0 )... p(w N w N 1 ) We know analytical (Gaussians!) results only for simplest cases F(x, v; t) m = γv ω 2 x + a 0
16 The parabolic method We don t know how to integrate every model Newton approximation The force at a small δt is almost constant (but depends on initial position + parameters) We can calculate the trajectory/propagator Repeat this procedure for the next step
17 Outline 1 Motivation 2
18 Delta function approximation Conjugate prior for p(µ). At some level approximation for large data sets... dµ p(µ)p( y w, µ) δ( y x) Now we have only Gaussian integrations over velocities. Φ = d v p(y 0, v 0, y 1, v 1,..., y N, v N, θ, η)
19 Main loop At each integration step, collect a bunch of coefficients η α i G i e η 2 (a i v 2 i +2b iv i +2c i v i v i 1 +d i v 2 i 1 +2e iv i 1 +f i) After each step, some coefficients must be updated before we start with the next integration Φ = d v p( y, v θ, η) = η N 1 2 η G(θ) e 2 f (θ, y)
20 Inference results Use Laplace approximation to normalize p(θ y, η), plug-in a Gamma prior p(η) p(θ y) p(θ) G(θ) [ f ( y) + f (θ, y) f ( θ, y) + δ ] N+1 2 +σ+ d 2 p(η y) is calculated analytically
21 Inference results Use Laplace approximation to normalize p(θ y, η), plug-in a Gamma prior p(η) p(θ y) p(θ) G(θ) [ f ( y) + f (θ, y) f ( θ, y) + δ ] N+1 2 +σ+ d 2 p(η y) is calculated analytically We use a flat prior p(θ) (I m ashamed!)
22 Outline 1 Motivation 2
23 Oscillatory brownian motion Force parameters vs. data length constant linear quadratic Coefficient Data length
24 Comments Works pretty well with artificially generated time series Still, it does not get the diffusion coefficient quite right in some cases It is also somewhat robust to the existence of dissipative forces
25 Some results η(1) θ 1 (0) θ 2 (0.1) Simple 0.96(0.03) 0.07(0.02) ( ) Harmonic 0.78(0.03) 0.04(0.08) 0.099(0.003) Dissipative 1.06(0.03) 0.08(0.02) ( ) D-H 1.07(0.03) 0.04(0.08) 0.096(0.004)
26 Outline 1 Motivation 2
27 You will not win any money! There is no force. This will NOT make you win money!
28 You will not win any money! There is no force. This will NOT make you win money! But this is the expected behavior, of course Things to explore (speculation-crash patterns): noise may not be Wanier volatility time we can introduce trends as a time-dependent force
29 The time series data GE closing values log2-return year
30 Given f (x, θ), it is possible to infer θ and the intensity of the noise which governs a Langevin system
31 Given f (x, θ), it is possible to infer θ and the intensity of the noise which governs a Langevin system Open possibilities: better linear approximations, time-dependent parameters, linear diffusion coefficient.
32 Given f (x, θ), it is possible to infer θ and the intensity of the noise which governs a Langevin system Open possibilities: better linear approximations, time-dependent parameters, linear diffusion coefficient. Open issues Work out a decent prior p(θ) (and calculate the evidence!)
33 Given f (x, θ), it is possible to infer θ and the intensity of the noise which governs a Langevin system Open possibilities: better linear approximations, time-dependent parameters, linear diffusion coefficient. Open issues Work out a decent prior p(θ) (and calculate the evidence!) Treatment of noise is not really satisfactory
34 Given f (x, θ), it is possible to infer θ and the intensity of the noise which governs a Langevin system Open possibilities: better linear approximations, time-dependent parameters, linear diffusion coefficient. Open issues Work out a decent prior p(θ) (and calculate the evidence!) Treatment of noise is not really satisfactory Dissipative forces (easy) and non-wanier and Levy noises (potentially very hard)
The Smoluchowski-Kramers Approximation: What model describes a Brownian particle?
The Smoluchowski-Kramers Approximation: What model describes a Brownian particle? Scott Hottovy shottovy@math.arizona.edu University of Arizona Applied Mathematics October 7, 2011 Brown observes a particle
More informationLangevin Methods. Burkhard Dünweg Max Planck Institute for Polymer Research Ackermannweg 10 D Mainz Germany
Langevin Methods Burkhard Dünweg Max Planck Institute for Polymer Research Ackermannweg 1 D 55128 Mainz Germany Motivation Original idea: Fast and slow degrees of freedom Example: Brownian motion Replace
More informationA path integral approach to the Langevin equation
A path integral approach to the Langevin equation - Ashok Das Reference: A path integral approach to the Langevin equation, A. Das, S. Panda and J. R. L. Santos, arxiv:1411.0256 (to be published in Int.
More informationLecture 2: From Linear Regression to Kalman Filter and Beyond
Lecture 2: From Linear Regression to Kalman Filter and Beyond Department of Biomedical Engineering and Computational Science Aalto University January 26, 2012 Contents 1 Batch and Recursive Estimation
More informationIntroduction to nonequilibrium physics
Introduction to nonequilibrium physics Jae Dong Noh December 18, 2016 Preface This is a note for the lecture given in the 2016 KIAS-SNU Physics Winter Camp which is held at KIAS in December 17 23, 2016.
More informationLecture 2: From Linear Regression to Kalman Filter and Beyond
Lecture 2: From Linear Regression to Kalman Filter and Beyond January 18, 2017 Contents 1 Batch and Recursive Estimation 2 Towards Bayesian Filtering 3 Kalman Filter and Bayesian Filtering and Smoothing
More informationTable of Contents [ntc]
Table of Contents [ntc] 1. Introduction: Contents and Maps Table of contents [ntc] Equilibrium thermodynamics overview [nln6] Thermal equilibrium and nonequilibrium [nln1] Levels of description in statistical
More information16. Working with the Langevin and Fokker-Planck equations
16. Working with the Langevin and Fokker-Planck equations In the preceding Lecture, we have shown that given a Langevin equation (LE), it is possible to write down an equivalent Fokker-Planck equation
More informationLocal vs. Nonlocal Diffusions A Tale of Two Laplacians
Local vs. Nonlocal Diffusions A Tale of Two Laplacians Jinqiao Duan Dept of Applied Mathematics Illinois Institute of Technology Chicago duan@iit.edu Outline 1 Einstein & Wiener: The Local diffusion 2
More informationSTOCHASTIC PROCESSES IN PHYSICS AND CHEMISTRY
STOCHASTIC PROCESSES IN PHYSICS AND CHEMISTRY Third edition N.G. VAN KAMPEN Institute for Theoretical Physics of the University at Utrecht ELSEVIER Amsterdam Boston Heidelberg London New York Oxford Paris
More informationHandbook of Stochastic Methods
C. W. Gardiner Handbook of Stochastic Methods for Physics, Chemistry and the Natural Sciences Third Edition With 30 Figures Springer Contents 1. A Historical Introduction 1 1.1 Motivation I 1.2 Some Historical
More information1 Introduction. 2 Diffusion equation and central limit theorem. The content of these notes is also covered by chapter 3 section B of [1].
1 Introduction The content of these notes is also covered by chapter 3 section B of [1]. Diffusion equation and central limit theorem Consider a sequence {ξ i } i=1 i.i.d. ξ i = d ξ with ξ : Ω { Dx, 0,
More informationLecture 4: Introduction to stochastic processes and stochastic calculus
Lecture 4: Introduction to stochastic processes and stochastic calculus Cédric Archambeau Centre for Computational Statistics and Machine Learning Department of Computer Science University College London
More informationThe Kramers problem and first passage times.
Chapter 8 The Kramers problem and first passage times. The Kramers problem is to find the rate at which a Brownian particle escapes from a potential well over a potential barrier. One method of attack
More information1/f Fluctuations from the Microscopic Herding Model
1/f Fluctuations from the Microscopic Herding Model Bronislovas Kaulakys with Vygintas Gontis and Julius Ruseckas Institute of Theoretical Physics and Astronomy Vilnius University, Lithuania www.itpa.lt/kaulakys
More informationBayesian Regression Linear and Logistic Regression
When we want more than point estimates Bayesian Regression Linear and Logistic Regression Nicole Beckage Ordinary Least Squares Regression and Lasso Regression return only point estimates But what if we
More informationSession 1: Probability and Markov chains
Session 1: Probability and Markov chains 1. Probability distributions and densities. 2. Relevant distributions. 3. Change of variable. 4. Stochastic processes. 5. The Markov property. 6. Markov finite
More informationGaussian processes for inference in stochastic differential equations
Gaussian processes for inference in stochastic differential equations Manfred Opper, AI group, TU Berlin November 6, 2017 Manfred Opper, AI group, TU Berlin (TU Berlin) inference in SDE November 6, 2017
More informationPattern Recognition and Machine Learning. Bishop Chapter 2: Probability Distributions
Pattern Recognition and Machine Learning Chapter 2: Probability Distributions Cécile Amblard Alex Kläser Jakob Verbeek October 11, 27 Probability Distributions: General Density Estimation: given a finite
More informationLikelihood-free MCMC
Bayesian inference for stable distributions with applications in finance Department of Mathematics University of Leicester September 2, 2011 MSc project final presentation Outline 1 2 3 4 Classical Monte
More informationIntroduction to Systems Analysis and Decision Making Prepared by: Jakub Tomczak
Introduction to Systems Analysis and Decision Making Prepared by: Jakub Tomczak 1 Introduction. Random variables During the course we are interested in reasoning about considered phenomenon. In other words,
More informationMathematical Methods for Neurosciences. ENS - Master MVA Paris 6 - Master Maths-Bio ( )
Mathematical Methods for Neurosciences. ENS - Master MVA Paris 6 - Master Maths-Bio (2014-2015) Etienne Tanré - Olivier Faugeras INRIA - Team Tosca November 26th, 2014 E. Tanré (INRIA - Team Tosca) Mathematical
More informationHomogenization with stochastic differential equations
Homogenization with stochastic differential equations Scott Hottovy shottovy@math.arizona.edu University of Arizona Program in Applied Mathematics October 12, 2011 Modeling with SDE Use SDE to model system
More informationMarkov Chain Monte Carlo
Department of Statistics The University of Auckland https://www.stat.auckland.ac.nz/~brewer/ Emphasis I will try to emphasise the underlying ideas of the methods. I will not be teaching specific software
More informationDiffusion in the cell
Diffusion in the cell Single particle (random walk) Microscopic view Macroscopic view Measuring diffusion Diffusion occurs via Brownian motion (passive) Ex.: D = 100 μm 2 /s for typical protein in water
More informationLecture 6: Bayesian Inference in SDE Models
Lecture 6: Bayesian Inference in SDE Models Bayesian Filtering and Smoothing Point of View Simo Särkkä Aalto University Simo Särkkä (Aalto) Lecture 6: Bayesian Inference in SDEs 1 / 45 Contents 1 SDEs
More informationRiemann Manifold Methods in Bayesian Statistics
Ricardo Ehlers ehlers@icmc.usp.br Applied Maths and Stats University of São Paulo, Brazil Working Group in Statistical Learning University College Dublin September 2015 Bayesian inference is based on Bayes
More informationUnsupervised Learning
Unsupervised Learning Bayesian Model Comparison Zoubin Ghahramani zoubin@gatsby.ucl.ac.uk Gatsby Computational Neuroscience Unit, and MSc in Intelligent Systems, Dept Computer Science University College
More informationThis is a Gaussian probability centered around m = 0 (the most probable and mean position is the origin) and the mean square displacement m 2 = n,or
Physics 7b: Statistical Mechanics Brownian Motion Brownian motion is the motion of a particle due to the buffeting by the molecules in a gas or liquid. The particle must be small enough that the effects
More informationNotes on pseudo-marginal methods, variational Bayes and ABC
Notes on pseudo-marginal methods, variational Bayes and ABC Christian Andersson Naesseth October 3, 2016 The Pseudo-Marginal Framework Assume we are interested in sampling from the posterior distribution
More informationDifferent approaches to model wind speed based on stochastic differential equations
1 Universidad de Castilla La Mancha Different approaches to model wind speed based on stochastic differential equations Rafael Zárate-Miñano Escuela de Ingeniería Minera e Industrial de Almadén Universidad
More informationHandbook of Stochastic Methods
Springer Series in Synergetics 13 Handbook of Stochastic Methods for Physics, Chemistry and the Natural Sciences von Crispin W Gardiner Neuausgabe Handbook of Stochastic Methods Gardiner schnell und portofrei
More informationNonparametric Drift Estimation for Stochastic Differential Equations
Nonparametric Drift Estimation for Stochastic Differential Equations Gareth Roberts 1 Department of Statistics University of Warwick Brazilian Bayesian meeting, March 2010 Joint work with O. Papaspiliopoulos,
More information08. Brownian Motion. University of Rhode Island. Gerhard Müller University of Rhode Island,
University of Rhode Island DigitalCommons@URI Nonequilibrium Statistical Physics Physics Course Materials 1-19-215 8. Brownian Motion Gerhard Müller University of Rhode Island, gmuller@uri.edu Follow this
More informationCLASS NOTES Models, Algorithms and Data: Introduction to computing 2018
CLASS NOTES Models, Algorithms and Data: Introduction to computing 208 Petros Koumoutsakos, Jens Honore Walther (Last update: June, 208) IMPORTANT DISCLAIMERS. REFERENCES: Much of the material (ideas,
More informationGaussian Process Approximations of Stochastic Differential Equations
Gaussian Process Approximations of Stochastic Differential Equations Cédric Archambeau Centre for Computational Statistics and Machine Learning University College London c.archambeau@cs.ucl.ac.uk CSML
More informationHierarchical models. Dr. Jarad Niemi. August 31, Iowa State University. Jarad Niemi (Iowa State) Hierarchical models August 31, / 31
Hierarchical models Dr. Jarad Niemi Iowa State University August 31, 2017 Jarad Niemi (Iowa State) Hierarchical models August 31, 2017 1 / 31 Normal hierarchical model Let Y ig N(θ g, σ 2 ) for i = 1,...,
More informationState-Space Methods for Inferring Spike Trains from Calcium Imaging
State-Space Methods for Inferring Spike Trains from Calcium Imaging Joshua Vogelstein Johns Hopkins April 23, 2009 Joshua Vogelstein (Johns Hopkins) State-Space Calcium Imaging April 23, 2009 1 / 78 Outline
More informationmacroscopic view (phenomenological) microscopic view (atomistic) computing reaction rate rate of reactions experiments thermodynamics
Rate Theory (overview) macroscopic view (phenomenological) rate of reactions experiments thermodynamics Van t Hoff & Arrhenius equation microscopic view (atomistic) statistical mechanics transition state
More informationLecture on Parameter Estimation for Stochastic Differential Equations. Erik Lindström
Lecture on Parameter Estimation for Stochastic Differential Equations Erik Lindström Recap We are interested in the parameters θ in the Stochastic Integral Equations X(t) = X(0) + t 0 µ θ (s, X(s))ds +
More informationNew Physical Principle for Monte-Carlo simulations
EJTP 6, No. 21 (2009) 9 20 Electronic Journal of Theoretical Physics New Physical Principle for Monte-Carlo simulations Michail Zak Jet Propulsion Laboratory California Institute of Technology, Advance
More informationBrownian Motion and Langevin Equations
1 Brownian Motion and Langevin Equations 1.1 Langevin Equation and the Fluctuation- Dissipation Theorem The theory of Brownian motion is perhaps the simplest approximate way to treat the dynamics of nonequilibrium
More informationGraphical Models for Collaborative Filtering
Graphical Models for Collaborative Filtering Le Song Machine Learning II: Advanced Topics CSE 8803ML, Spring 2012 Sequence modeling HMM, Kalman Filter, etc.: Similarity: the same graphical model topology,
More informationPatterns of Scalable Bayesian Inference Background (Session 1)
Patterns of Scalable Bayesian Inference Background (Session 1) Jerónimo Arenas-García Universidad Carlos III de Madrid jeronimo.arenas@gmail.com June 14, 2017 1 / 15 Motivation. Bayesian Learning principles
More information2012 NCTS Workshop on Dynamical Systems
Barbara Gentz gentz@math.uni-bielefeld.de http://www.math.uni-bielefeld.de/ gentz 2012 NCTS Workshop on Dynamical Systems National Center for Theoretical Sciences, National Tsing-Hua University Hsinchu,
More informationStatistical Mechanics of Active Matter
Statistical Mechanics of Active Matter Umberto Marini Bettolo Marconi University of Camerino, Italy Naples, 24 May,2017 Umberto Marini Bettolo Marconi (2017) Statistical Mechanics of Active Matter 2017
More informationApplied Probability and Stochastic Processes
Applied Probability and Stochastic Processes In Engineering and Physical Sciences MICHEL K. OCHI University of Florida A Wiley-Interscience Publication JOHN WILEY & SONS New York - Chichester Brisbane
More informationDensity Estimation. Seungjin Choi
Density Estimation Seungjin Choi Department of Computer Science and Engineering Pohang University of Science and Technology 77 Cheongam-ro, Nam-gu, Pohang 37673, Korea seungjin@postech.ac.kr http://mlg.postech.ac.kr/
More informationLinear Systems Theory
ME 3253 Linear Systems Theory Review Class Overview and Introduction 1. How to build dynamic system model for physical system? 2. How to analyze the dynamic system? -- Time domain -- Frequency domain (Laplace
More informationAnomalous Lévy diffusion: From the flight of an albatross to optical lattices. Eric Lutz Abteilung für Quantenphysik, Universität Ulm
Anomalous Lévy diffusion: From the flight of an albatross to optical lattices Eric Lutz Abteilung für Quantenphysik, Universität Ulm Outline 1 Lévy distributions Broad distributions Central limit theorem
More informationIntroduction to Algorithmic Trading Strategies Lecture 4
Introduction to Algorithmic Trading Strategies Lecture 4 Optimal Pairs Trading by Stochastic Control Haksun Li haksun.li@numericalmethod.com www.numericalmethod.com Outline Problem formulation Ito s lemma
More informationLecture 21: Physical Brownian Motion II
Lecture 21: Physical Brownian Motion II Scribe: Ken Kamrin Department of Mathematics, MIT May 3, 25 Resources An instructie applet illustrating physical Brownian motion can be found at: http://www.phy.ntnu.edu.tw/jaa/gas2d/gas2d.html
More informationBrownian Motion. An Undergraduate Introduction to Financial Mathematics. J. Robert Buchanan. J. Robert Buchanan Brownian Motion
Brownian Motion An Undergraduate Introduction to Financial Mathematics J. Robert Buchanan 2010 Background We have already seen that the limiting behavior of a discrete random walk yields a derivation of
More informationMATH 56A SPRING 2008 STOCHASTIC PROCESSES 197
MATH 56A SPRING 8 STOCHASTIC PROCESSES 197 9.3. Itô s formula. First I stated the theorem. Then I did a simple example to make sure we understand what it says. Then I proved it. The key point is Lévy s
More informationNonparametric Bayesian Methods (Gaussian Processes)
[70240413 Statistical Machine Learning, Spring, 2015] Nonparametric Bayesian Methods (Gaussian Processes) Jun Zhu dcszj@mail.tsinghua.edu.cn http://bigml.cs.tsinghua.edu.cn/~jun State Key Lab of Intelligent
More informationGAUSSIAN PROCESS REGRESSION
GAUSSIAN PROCESS REGRESSION CSE 515T Spring 2015 1. BACKGROUND The kernel trick again... The Kernel Trick Consider again the linear regression model: y(x) = φ(x) w + ε, with prior p(w) = N (w; 0, Σ). The
More informationFoundations of Statistical Inference
Foundations of Statistical Inference Julien Berestycki Department of Statistics University of Oxford MT 2016 Julien Berestycki (University of Oxford) SB2a MT 2016 1 / 32 Lecture 14 : Variational Bayes
More informationSequential Monte Carlo and Particle Filtering. Frank Wood Gatsby, November 2007
Sequential Monte Carlo and Particle Filtering Frank Wood Gatsby, November 2007 Importance Sampling Recall: Let s say that we want to compute some expectation (integral) E p [f] = p(x)f(x)dx and we remember
More informationIntroduction to Bayesian Inference
University of Pennsylvania EABCN Training School May 10, 2016 Bayesian Inference Ingredients of Bayesian Analysis: Likelihood function p(y φ) Prior density p(φ) Marginal data density p(y ) = p(y φ)p(φ)dφ
More informationProbabilistic Graphical Models
Probabilistic Graphical Models Lecture 11 CRFs, Exponential Family CS/CNS/EE 155 Andreas Krause Announcements Homework 2 due today Project milestones due next Monday (Nov 9) About half the work should
More informationSome Tools From Stochastic Analysis
W H I T E Some Tools From Stochastic Analysis J. Potthoff Lehrstuhl für Mathematik V Universität Mannheim email: potthoff@math.uni-mannheim.de url: http://ls5.math.uni-mannheim.de To close the file, click
More informationDUBLIN CITY UNIVERSITY
DUBLIN CITY UNIVERSITY SAMPLE EXAMINATIONS 2017/2018 MODULE: QUALIFICATIONS: Simulation for Finance MS455 B.Sc. Actuarial Mathematics ACM B.Sc. Financial Mathematics FIM YEAR OF STUDY: 4 EXAMINERS: Mr
More informationBayesian inference. Fredrik Ronquist and Peter Beerli. October 3, 2007
Bayesian inference Fredrik Ronquist and Peter Beerli October 3, 2007 1 Introduction The last few decades has seen a growing interest in Bayesian inference, an alternative approach to statistical inference.
More informationσ(a) = a N (x; 0, 1 2 ) dx. σ(a) = Φ(a) =
Until now we have always worked with likelihoods and prior distributions that were conjugate to each other, allowing the computation of the posterior distribution to be done in closed form. Unfortunately,
More informationExercises Tutorial at ICASSP 2016 Learning Nonlinear Dynamical Models Using Particle Filters
Exercises Tutorial at ICASSP 216 Learning Nonlinear Dynamical Models Using Particle Filters Andreas Svensson, Johan Dahlin and Thomas B. Schön March 18, 216 Good luck! 1 [Bootstrap particle filter for
More informationSloppy derivations of Ito s formula and the Fokker-Planck equations
Sloppy derivations of Ito s formula and the Fokker-Planck equations P. G. Harrison Department of Computing, Imperial College London South Kensington Campus, London SW7 AZ, UK email: pgh@doc.ic.ac.uk April
More informationNon-Parametric Bayes
Non-Parametric Bayes Mark Schmidt UBC Machine Learning Reading Group January 2016 Current Hot Topics in Machine Learning Bayesian learning includes: Gaussian processes. Approximate inference. Bayesian
More informationState Space and Hidden Markov Models
State Space and Hidden Markov Models Kunsch H.R. State Space and Hidden Markov Models. ETH- Zurich Zurich; Aliaksandr Hubin Oslo 2014 Contents 1. Introduction 2. Markov Chains 3. Hidden Markov and State
More informationLearning Bayesian network : Given structure and completely observed data
Learning Bayesian network : Given structure and completely observed data Probabilistic Graphical Models Sharif University of Technology Spring 2017 Soleymani Learning problem Target: true distribution
More informationStochastic (intermittent) Spikes and Strong Noise Limit of SDEs.
Stochastic (intermittent) Spikes and Strong Noise Limit of SDEs. D. Bernard in collaboration with M. Bauer and (in part) A. Tilloy. IPAM-UCLA, Jan 2017. 1 Strong Noise Limit of (some) SDEs Stochastic differential
More informationBayesian Machine Learning
Bayesian Machine Learning Andrew Gordon Wilson ORIE 6741 Lecture 2: Bayesian Basics https://people.orie.cornell.edu/andrew/orie6741 Cornell University August 25, 2016 1 / 17 Canonical Machine Learning
More informationVariational Scoring of Graphical Model Structures
Variational Scoring of Graphical Model Structures Matthew J. Beal Work with Zoubin Ghahramani & Carl Rasmussen, Toronto. 15th September 2003 Overview Bayesian model selection Approximations using Variational
More informationFrom Random Numbers to Monte Carlo. Random Numbers, Random Walks, Diffusion, Monte Carlo integration, and all that
From Random Numbers to Monte Carlo Random Numbers, Random Walks, Diffusion, Monte Carlo integration, and all that Random Walk Through Life Random Walk Through Life If you flip the coin 5 times you will
More informationA thorough derivation of back-propagation for people who really want to understand it by: Mike Gashler, September 2010
A thorough derivation of back-propagation for people who really want to understand it by: Mike Gashler, September 2010 Define the problem: Suppose we have a 5-layer feed-forward neural network. (I intentionally
More information10. Composite Hypothesis Testing. ECE 830, Spring 2014
10. Composite Hypothesis Testing ECE 830, Spring 2014 1 / 25 In many real world problems, it is difficult to precisely specify probability distributions. Our models for data may involve unknown parameters
More informationHypothesis Testing. Econ 690. Purdue University. Justin L. Tobias (Purdue) Testing 1 / 33
Hypothesis Testing Econ 690 Purdue University Justin L. Tobias (Purdue) Testing 1 / 33 Outline 1 Basic Testing Framework 2 Testing with HPD intervals 3 Example 4 Savage Dickey Density Ratio 5 Bartlett
More informationStatistical learning. Chapter 20, Sections 1 4 1
Statistical learning Chapter 20, Sections 1 4 Chapter 20, Sections 1 4 1 Outline Bayesian learning Maximum a posteriori and maximum likelihood learning Bayes net learning ML parameter learning with complete
More informationModel Specification Testing in Nonparametric and Semiparametric Time Series Econometrics. Jiti Gao
Model Specification Testing in Nonparametric and Semiparametric Time Series Econometrics Jiti Gao Department of Statistics School of Mathematics and Statistics The University of Western Australia Crawley
More informationStat 451 Lecture Notes Markov Chain Monte Carlo. Ryan Martin UIC
Stat 451 Lecture Notes 07 12 Markov Chain Monte Carlo Ryan Martin UIC www.math.uic.edu/~rgmartin 1 Based on Chapters 8 9 in Givens & Hoeting, Chapters 25 27 in Lange 2 Updated: April 4, 2016 1 / 42 Outline
More informationSparse Bayesian Logistic Regression with Hierarchical Prior and Variational Inference
Sparse Bayesian Logistic Regression with Hierarchical Prior and Variational Inference Shunsuke Horii Waseda University s.horii@aoni.waseda.jp Abstract In this paper, we present a hierarchical model which
More informationManifold Monte Carlo Methods
Manifold Monte Carlo Methods Mark Girolami Department of Statistical Science University College London Joint work with Ben Calderhead Research Section Ordinary Meeting The Royal Statistical Society October
More informationLecture 1: Pragmatic Introduction to Stochastic Differential Equations
Lecture 1: Pragmatic Introduction to Stochastic Differential Equations Simo Särkkä Aalto University, Finland (visiting at Oxford University, UK) November 13, 2013 Simo Särkkä (Aalto) Lecture 1: Pragmatic
More informationLinear Models A linear model is defined by the expression
Linear Models A linear model is defined by the expression x = F β + ɛ. where x = (x 1, x 2,..., x n ) is vector of size n usually known as the response vector. β = (β 1, β 2,..., β p ) is the transpose
More informationDavid Giles Bayesian Econometrics
David Giles Bayesian Econometrics 1. General Background 2. Constructing Prior Distributions 3. Properties of Bayes Estimators and Tests 4. Bayesian Analysis of the Multiple Regression Model 5. Bayesian
More informationStat 451 Lecture Notes Numerical Integration
Stat 451 Lecture Notes 03 12 Numerical Integration Ryan Martin UIC www.math.uic.edu/~rgmartin 1 Based on Chapter 5 in Givens & Hoeting, and Chapters 4 & 18 of Lange 2 Updated: February 11, 2016 1 / 29
More information5 Applying the Fokker-Planck equation
5 Applying the Fokker-Planck equation We begin with one-dimensional examples, keeping g = constant. Recall: the FPE for the Langevin equation with η(t 1 )η(t ) = κδ(t 1 t ) is = f(x) + g(x)η(t) t = x [f(x)p
More informationA brief introduction to Conditional Random Fields
A brief introduction to Conditional Random Fields Mark Johnson Macquarie University April, 2005, updated October 2010 1 Talk outline Graphical models Maximum likelihood and maximum conditional likelihood
More informationPhysics 403. Segev BenZvi. Parameter Estimation, Correlations, and Error Bars. Department of Physics and Astronomy University of Rochester
Physics 403 Parameter Estimation, Correlations, and Error Bars Segev BenZvi Department of Physics and Astronomy University of Rochester Table of Contents 1 Review of Last Class Best Estimates and Reliability
More informationBayesian RL Seminar. Chris Mansley September 9, 2008
Bayesian RL Seminar Chris Mansley September 9, 2008 Bayes Basic Probability One of the basic principles of probability theory, the chain rule, will allow us to derive most of the background material in
More informationPart 1: Expectation Propagation
Chalmers Machine Learning Summer School Approximate message passing and biomedicine Part 1: Expectation Propagation Tom Heskes Machine Learning Group, Institute for Computing and Information Sciences Radboud
More informationCPSC 540: Machine Learning
CPSC 540: Machine Learning MCMC and Non-Parametric Bayes Mark Schmidt University of British Columbia Winter 2016 Admin I went through project proposals: Some of you got a message on Piazza. No news is
More informationStochastic Modelling in Climate Science
Stochastic Modelling in Climate Science David Kelly Mathematics Department UNC Chapel Hill dtbkelly@gmail.com November 16, 2013 David Kelly (UNC) Stochastic Climate November 16, 2013 1 / 36 Why use stochastic
More informationLecture 10: Powers of Matrices, Difference Equations
Lecture 10: Powers of Matrices, Difference Equations Difference Equations A difference equation, also sometimes called a recurrence equation is an equation that defines a sequence recursively, i.e. each
More informationAuxiliary Particle Methods
Auxiliary Particle Methods Perspectives & Applications Adam M. Johansen 1 adam.johansen@bristol.ac.uk Oxford University Man Institute 29th May 2008 1 Collaborators include: Arnaud Doucet, Nick Whiteley
More informationParticle Filtering a brief introductory tutorial. Frank Wood Gatsby, August 2007
Particle Filtering a brief introductory tutorial Frank Wood Gatsby, August 2007 Problem: Target Tracking A ballistic projectile has been launched in our direction and may or may not land near enough to
More informationComputer Intensive Methods in Mathematical Statistics
Computer Intensive Methods in Mathematical Statistics Department of mathematics johawes@kth.se Lecture 16 Advanced topics in computational statistics 18 May 2017 Computer Intensive Methods (1) Plan of
More informationComputationalToolsforComparing AsymmetricGARCHModelsviaBayes Factors. RicardoS.Ehlers
ComputationalToolsforComparing AsymmetricGARCHModelsviaBayes Factors RicardoS.Ehlers Laboratório de Estatística e Geoinformação- UFPR http://leg.ufpr.br/ ehlers ehlers@leg.ufpr.br II Workshop on Statistical
More informationGWAS IV: Bayesian linear (variance component) models
GWAS IV: Bayesian linear (variance component) models Dr. Oliver Stegle Christoh Lippert Prof. Dr. Karsten Borgwardt Max-Planck-Institutes Tübingen, Germany Tübingen Summer 2011 Oliver Stegle GWAS IV: Bayesian
More informationRemarks on Improper Ignorance Priors
As a limit of proper priors Remarks on Improper Ignorance Priors Two caveats relating to computations with improper priors, based on their relationship with finitely-additive, but not countably-additive
More informationPath integrals for classical Markov processes
Path integrals for classical Markov processes Hugo Touchette National Institute for Theoretical Physics (NITheP) Stellenbosch, South Africa Chris Engelbrecht Summer School on Non-Linear Phenomena in Field
More information