Monte Carlo in Bayesian Statistics

Riemann Manifold Methods in Bayesian Statistics

Ricardo Ehlers ehlers@icmc.usp.br Applied Maths and Stats University of São Paulo, Brazil Working Group in Statistical Learning University College Dublin September 2015 Bayesian inference is based on Bayes

Manifold Monte Carlo Methods

Manifold Monte Carlo Methods Mark Girolami Department of Statistical Science University College London Joint work with Ben Calderhead Research Section Ordinary Meeting The Royal Statistical Society October

Markov Chain Monte Carlo methods

Markov Chain Monte Carlo methods Tomas McKelvey and Lennart Svensson Signal Processing Group Department of Signals and Systems Chalmers University of Technology, Sweden November 26, 2012 Today s learning

BAYESIAN METHODS FOR VARIABLE SELECTION WITH APPLICATIONS TO HIGH-DIMENSIONAL DATA

BAYESIAN METHODS FOR VARIABLE SELECTION WITH APPLICATIONS TO HIGH-DIMENSIONAL DATA Intro: Course Outline and Brief Intro to Marina Vannucci Rice University, USA PASI-CIMAT 04/28-30/2010 Marina Vannucci

Bayesian Estimation of DSGE Models 1 Chapter 3: A Crash Course in Bayesian Inference

1 The views expressed in this paper are those of the authors and do not necessarily reflect the views of the Federal Reserve Board of Governors or the Federal Reserve System. Bayesian Estimation of DSGE

Bayesian Inference and MCMC

Bayesian Inference and MCMC Aryan Arbabi Partly based on MCMC slides from CSC412 Fall 2018 1 / 18 Bayesian Inference - Motivation Consider we have a data set D = {x 1,..., x n }. E.g each x i can be the

Efficient adaptive covariate modelling for extremes

Efficient adaptive covariate modelling for extremes Slides at www.lancs.ac.uk/ jonathan Matthew Jones, David Randell, Emma Ross, Elena Zanini, Philip Jonathan Copyright of Shell December 218 1 / 23 Structural

Bayesian Phylogenetics:

Bayesian Phylogenetics: an introduction Marc A. Suchard msuchard@ucla.edu UCLA Who is this man? How sure are you? The one true tree? Methods we ve learned so far try to find a single tree that best describes

Machine Learning. Probabilistic KNN.

Machine Learning. Mark Girolami girolami@dcs.gla.ac.uk Department of Computing Science University of Glasgow June 21, 2007 p. 1/3 KNN is a remarkably simple algorithm with proven error-rates June 21, 2007

Afternoon Meeting on Bayesian Computation 2018 University of Reading

Gabriele Abbati 1, Alessra Tosi 2, Seth Flaxman 3, Michael A Osborne 1 1 University of Oxford, 2 Mind Foundry Ltd, 3 Imperial College London Afternoon Meeting on Bayesian Computation 2018 University of

CSC 2541: Bayesian Methods for Machine Learning

CSC 2541: Bayesian Methods for Machine Learning Radford M. Neal, University of Toronto, 2011 Lecture 10 Alternatives to Monte Carlo Computation Since about 1990, Markov chain Monte Carlo has been the dominant

Markov Chain Monte Carlo, Numerical Integration

Markov Chain Monte Carlo, Numerical Integration (See Statistics) Trevor Gallen Fall 2015 1 / 1 Agenda Numerical Integration: MCMC methods Estimating Markov Chains Estimating latent variables 2 / 1 Numerical

Riemann manifold Langevin and Hamiltonian Monte Carlo methods

J. R. Statist. Soc. B (2011) 73, Part 2, pp. 123 214 Riemann manifold Langevin and Hamiltonian Monte Carlo methods Mark Girolami and Ben Calderhead University College London, UK [Read before The Royal

(5) Multi-parameter models - Gibbs sampling. ST440/540: Applied Bayesian Analysis

Summarizing a posterior Given the data and prior the posterior is determined Summarizing the posterior gives parameter estimates, intervals, and hypothesis tests Most of these computations are integrals

an introduction to bayesian inference

with an application to network analysis http://jakehofman.com january 13, 2010 motivation would like models that: provide predictive and explanatory power are complex enough to describe observed phenomena

Parameter estimation and forecasting. Cristiano Porciani AIfA, Uni-Bonn

Parameter estimation and forecasting Cristiano Porciani AIfA, Uni-Bonn Questions? C. Porciani Estimation & forecasting 2 Temperature fluctuations Variance at multipole l (angle ~180o/l) C. Porciani Estimation

Who was Bayes? Bayesian Phylogenetics. What is Bayes Theorem?

Who was Bayes? Bayesian Phylogenetics Bret Larget Departments of Botany and of Statistics University of Wisconsin Madison October 6, 2011 The Reverand Thomas Bayes was born in London in 1702. He was the

Bayesian Phylogenetics

Bayesian Phylogenetics Bret Larget Departments of Botany and of Statistics University of Wisconsin Madison October 6, 2011 Bayesian Phylogenetics 1 / 27 Who was Bayes? The Reverand Thomas Bayes was born

MCMC algorithms for fitting Bayesian models

MCMC algorithms for fitting Bayesian models p. 1/1 MCMC algorithms for fitting Bayesian models Sudipto Banerjee sudiptob@biostat.umn.edu University of Minnesota MCMC algorithms for fitting Bayesian models

Learning the hyper-parameters. Luca Martino

Learning the hyper-parameters Luca Martino 2017 2017 1 / 28 Parameters and hyper-parameters 1. All the described methods depend on some choice of hyper-parameters... 2. For instance, do you recall λ (bandwidth

A Review of Pseudo-Marginal Markov Chain Monte Carlo

A Review of Pseudo-Marginal Markov Chain Monte Carlo Discussed by: Yizhe Zhang October 21, 2016 Outline 1 Overview 2 Paper review 3 experiment 4 conclusion Motivation & overview Notation: θ denotes the

Risk Estimation and Uncertainty Quantification by Markov Chain Monte Carlo Methods

Risk Estimation and Uncertainty Quantification by Markov Chain Monte Carlo Methods Konstantin Zuev Institute for Risk and Uncertainty University of Liverpool http://www.liv.ac.uk/risk-and-uncertainty/staff/k-zuev/

MCMC and Gibbs Sampling. Kayhan Batmanghelich

MCMC and Gibbs Sampling Kayhan Batmanghelich 1 Approaches to inference l Exact inference algorithms l l l The elimination algorithm Message-passing algorithm (sum-product, belief propagation) The junction

Statistical Methods in Particle Physics Lecture 1: Bayesian methods

Statistical Methods in Particle Physics Lecture 1: Bayesian methods SUSSP65 St Andrews 16 29 August 2009 Glen Cowan Physics Department Royal Holloway, University of London g.cowan@rhul.ac.uk www.pp.rhul.ac.uk/~cowan

Bayesian inference for multivariate extreme value distributions

Bayesian inference for multivariate extreme value distributions Sebastian Engelke Clément Dombry, Marco Oesting Toronto, Fields Institute, May 4th, 2016 Main motivation For a parametric model Z F θ of

Markov Chain Monte Carlo

Markov Chain Monte Carlo Recall: To compute the expectation E ( h(y ) ) we use the approximation E(h(Y )) 1 n n h(y ) t=1 with Y (1),..., Y (n) h(y). Thus our aim is to sample Y (1),..., Y (n) from f(y).

Slice Sampling with Adaptive Multivariate Steps: The Shrinking-Rank Method

Slice Sampling with Adaptive Multivariate Steps: The Shrinking-Rank Method Madeleine B. Thompson Radford M. Neal Abstract The shrinking rank method is a variation of slice sampling that is efficient at

Gradient-based Monte Carlo sampling methods

Gradient-based Monte Carlo sampling methods Johannes von Lindheim 31. May 016 Abstract Notes for a 90-minute presentation on gradient-based Monte Carlo sampling methods for the Uncertainty Quantification

Nested Sampling. Brendon J. Brewer. brewer/ Department of Statistics The University of Auckland

Department of Statistics The University of Auckland https://www.stat.auckland.ac.nz/ brewer/ is a Monte Carlo method (not necessarily MCMC) that was introduced by John Skilling in 2004. It is very popular

19 : Slice Sampling and HMC

10-708: Probabilistic Graphical Models 10-708, Spring 2018 19 : Slice Sampling and HMC Lecturer: Kayhan Batmanghelich Scribes: Boxiang Lyu 1 MCMC (Auxiliary Variables Methods) In inference, we are often

Answers and expectations

Answers and expectations For a function f(x) and distribution P(x), the expectation of f with respect to P is The expectation is the average of f, when x is drawn from the probability distribution P E

Likelihood-free MCMC

Bayesian inference for stable distributions with applications in finance Department of Mathematics University of Leicester September 2, 2011 MSc project final presentation Outline 1 2 3 4 Classical Monte

Down by the Bayes, where the Watermelons Grow

Down by the Bayes, where the Watermelons Grow A Bayesian example using SAS SUAVe: Victoria SAS User Group Meeting November 21, 2017 Peter K. Ott, M.Sc., P.Stat. Strategic Analysis 1 Outline 1. Motivating

Bayesian Inference in GLMs. Frequentists typically base inferences on MLEs, asymptotic confidence

Bayesian Inference in GLMs Frequentists typically base inferences on MLEs, asymptotic confidence limits, and log-likelihood ratio tests Bayesians base inferences on the posterior distribution of the unknowns

Tutorial on ABC Algorithms

Tutorial on ABC Algorithms Dr Chris Drovandi Queensland University of Technology, Australia c.drovandi@qut.edu.au July 3, 2014 Notation Model parameter θ with prior π(θ) Likelihood is f(ý θ) with observed

VCMC: Variational Consensus Monte Carlo

VCMC: Variational Consensus Monte Carlo Maxim Rabinovich, Elaine Angelino, Michael I. Jordan Berkeley Vision and Learning Center September 22, 2015 probabilistic models! sky fog bridge water grass object

Metropolis-Hastings Algorithm

Strength of the Gibbs sampler Metropolis-Hastings Algorithm Easy algorithm to think about. Exploits the factorization properties of the joint probability distribution. No difficult choices to be made to

Quasi-Newton Methods for Markov Chain Monte Carlo

Quasi-Newton Methods for Markov Chain Monte Carlo Yichuan Zhang and Charles Sutton School of Informatics University of Edinburgh Y.Zhang-60@sms.ed.ac.uk, csutton@inf.ed.ac.uk Abstract The performance of

arxiv: v4 [stat.co] 4 May 2016

Hamiltonian Monte Carlo Acceleration using Surrogate Functions with Random Bases arxiv:56.5555v4 [stat.co] 4 May 26 Cheng Zhang Department of Mathematics University of California, Irvine Irvine, CA 92697

Bayes Factors, posterior predictives, short intro to RJMCMC. Thermodynamic Integration

Bayes Factors, posterior predictives, short intro to RJMCMC Thermodynamic Integration Dave Campbell 2016 Bayesian Statistical Inference P(θ Y ) P(Y θ)π(θ) Once you have posterior samples you can compute

Markov Chain Monte Carlo

1 Motivation 1.1 Bayesian Learning Markov Chain Monte Carlo Yale Chang In Bayesian learning, given data X, we make assumptions on the generative process of X by introducing hidden variables Z: p(z): prior

LECTURE 15 Markov chain Monte Carlo

LECTURE 15 Markov chain Monte Carlo There are many settings when posterior computation is a challenge in that one does not have a closed form expression for the posterior distribution. Markov chain Monte

CPSC 540: Machine Learning

CPSC 540: Machine Learning MCMC and Non-Parametric Bayes Mark Schmidt University of British Columbia Winter 2016 Admin I went through project proposals: Some of you got a message on Piazza. No news is

Log Gaussian Cox Processes. Chi Group Meeting February 23, 2016

Log Gaussian Cox Processes Chi Group Meeting February 23, 2016 Outline Typical motivating application Introduction to LGCP model Brief overview of inference Applications in my work just getting started

Large Scale Bayesian Inference

Large Scale Bayesian I in Cosmology Jens Jasche Garching, 11 September 2012 Introduction Cosmography 3D density and velocity fields Power-spectra, bi-spectra Dark Energy, Dark Matter, Gravity Cosmological

1 Geometry of high dimensional probability distributions

Hamiltonian Monte Carlo October 20, 2018 Debdeep Pati References: Neal, Radford M. MCMC using Hamiltonian dynamics. Handbook of Markov Chain Monte Carlo 2.11 (2011): 2. Betancourt, Michael. A conceptual

Bayesian Estimation with Sparse Grids

Bayesian Estimation with Sparse Grids Kenneth L. Judd and Thomas M. Mertens Institute on Computational Economics August 7, 27 / 48 Outline Introduction 2 Sparse grids Construction Integration with sparse

ComputationalToolsforComparing AsymmetricGARCHModelsviaBayes Factors. RicardoS.Ehlers

ComputationalToolsforComparing AsymmetricGARCHModelsviaBayes Factors RicardoS.Ehlers Laboratório de Estatística e Geoinformação- UFPR http://leg.ufpr.br/ ehlers ehlers@leg.ufpr.br II Workshop on Statistical

Efficient Bayesian Inference for Conditionally Autoregressive Models. Justin Angevaare. A Thesis presented to The University of Guelph

Efficient Bayesian Inference for Conditionally Autoregressive Models by Justin Angevaare A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Master of

Bayesian Estimation of Input Output Tables for Russia

Bayesian Estimation of Input Output Tables for Russia Oleg Lugovoy (EDF, RANE) Andrey Polbin (RANE) Vladimir Potashnikov (RANE) WIOD Conference April 24, 2012 Groningen Outline Motivation Objectives Bayesian

STA 4273H: Statistical Machine Learning

STA 4273H: Statistical Machine Learning Russ Salakhutdinov Department of Computer Science! Department of Statistical Sciences! rsalakhu@cs.toronto.edu! h0p://www.cs.utoronto.ca/~rsalakhu/ Lecture 7 Approximate

Notes on pseudo-marginal methods, variational Bayes and ABC

Notes on pseudo-marginal methods, variational Bayes and ABC Christian Andersson Naesseth October 3, 2016 The Pseudo-Marginal Framework Assume we are interested in sampling from the posterior distribution

MONTE CARLO METHODS. Hedibert Freitas Lopes

MONTE CARLO METHODS Hedibert Freitas Lopes The University of Chicago Booth School of Business 5807 South Woodlawn Avenue, Chicago, IL 60637 http://faculty.chicagobooth.edu/hedibert.lopes hlopes@chicagobooth.edu

Calibration of Stochastic Volatility Models using Particle Markov Chain Monte Carlo Methods

Calibration of Stochastic Volatility Models using Particle Markov Chain Monte Carlo Methods Jonas Hallgren 1 1 Department of Mathematics KTH Royal Institute of Technology Stockholm, Sweden BFS 2012 June

Kernel Adaptive Metropolis-Hastings

Kernel Adaptive Metropolis-Hastings Arthur Gretton,?? Gatsby Unit, CSML, University College London NIPS, December 2015 Arthur Gretton (Gatsby Unit, UCL) Kernel Adaptive Metropolis-Hastings 12/12/2015 1

Infer relationships among three species: Outgroup:

Infer relationships among three species: Outgroup: Three possible trees (topologies): A C B A B C Model probability 1.0 Prior distribution Data (observations) probability 1.0 Posterior distribution Bayes

Monte Carlo Techniques for Regressing Random Variables. Dan Pemstein. Using V-Dem the Right Way

: Monte Carlo Techniques for Regressing Random Variables Workshop Goals (Re)familiarize you with Monte Carlo methods for estimating functions of random variables, integrating/marginalizing (Re)familiarize

TEORIA BAYESIANA Ralph S. Silva

TEORIA BAYESIANA Ralph S. Silva Departamento de Métodos Estatísticos Instituto de Matemática Universidade Federal do Rio de Janeiro Sumário Numerical Integration Polynomial quadrature is intended to approximate

Bagging During Markov Chain Monte Carlo for Smoother Predictions

Bagging During Markov Chain Monte Carlo for Smoother Predictions Herbert K. H. Lee University of California, Santa Cruz Abstract: Making good predictions from noisy data is a challenging problem. Methods

SC7/SM6 Bayes Methods HT18 Lecturer: Geoff Nicholls Lecture 2: Monte Carlo Methods Notes and Problem sheets are available at http://www.stats.ox.ac.uk/~nicholls/bayesmethods/ and via the MSc weblearn pages.

Bayesian Inference for Discretely Sampled Diffusion Processes: A New MCMC Based Approach to Inference

Bayesian Inference for Discretely Sampled Diffusion Processes: A New MCMC Based Approach to Inference Osnat Stramer 1 and Matthew Bognar 1 Department of Statistics and Actuarial Science, University of

Lecture 8: Bayesian Estimation of Parameters in State Space Models

in State Space Models March 30, 2016 Contents 1 Bayesian estimation of parameters in state space models 2 Computational methods for parameter estimation 3 Practical parameter estimation in state space

Density Estimation. Seungjin Choi

Density Estimation Seungjin Choi Department of Computer Science and Engineering Pohang University of Science and Technology 77 Cheongam-ro, Nam-gu, Pohang 37673, Korea seungjin@postech.ac.kr http://mlg.postech.ac.kr/

MCMC for big data. Geir Storvik. BigInsight lunch - May Geir Storvik MCMC for big data BigInsight lunch - May / 17

MCMC for big data Geir Storvik BigInsight lunch - May 2 2018 Geir Storvik MCMC for big data BigInsight lunch - May 2 2018 1 / 17 Outline Why ordinary MCMC is not scalable Different approaches for making

Introduction to Bayesian Statistics 1

Introduction to Bayesian Statistics 1 STA 442/2101 Fall 2018 1 This slide show is an open-source document. See last slide for copyright information. 1 / 42 Thomas Bayes (1701-1761) Image from the Wikipedia

Bayesian Methods for Machine Learning

Bayesian Methods for Machine Learning CS 584: Big Data Analytics Material adapted from Radford Neal s tutorial (http://ftp.cs.utoronto.ca/pub/radford/bayes-tut.pdf), Zoubin Ghahramni (http://hunch.net/~coms-4771/zoubin_ghahramani_bayesian_learning.pdf),

Metropolis-Hastings sampling

Metropolis-Hastings sampling Gibbs sampling requires that a sample from each full conditional distribution. In all the cases we have looked at so far the conditional distributions were conjugate so sampling

Reminder of some Markov Chain properties:

Reminder of some Markov Chain properties: 1. a transition from one state to another occurs probabilistically 2. only state that matters is where you currently are (i.e. given present, future is independent

Phylogenetics: Bayesian Phylogenetic Analysis. COMP Spring 2015 Luay Nakhleh, Rice University

Phylogenetics: Bayesian Phylogenetic Analysis COMP 571 - Spring 2015 Luay Nakhleh, Rice University Bayes Rule P(X = x Y = y) = P(X = x, Y = y) P(Y = y) = P(X = x)p(y = y X = x) P x P(X = x 0 )P(Y = y X

17 : Markov Chain Monte Carlo

10-708: Probabilistic Graphical Models, Spring 2015 17 : Markov Chain Monte Carlo Lecturer: Eric P. Xing Scribes: Heran Lin, Bin Deng, Yun Huang 1 Review of Monte Carlo Methods 1.1 Overview Monte Carlo

eqr094: Hierarchical MCMC for Bayesian System Reliability

eqr094: Hierarchical MCMC for Bayesian System Reliability Alyson G. Wilson Statistical Sciences Group, Los Alamos National Laboratory P.O. Box 1663, MS F600 Los Alamos, NM 87545 USA Phone: 505-667-9167

ST 740: Markov Chain Monte Carlo

ST 740: Markov Chain Monte Carlo Alyson Wilson Department of Statistics North Carolina State University October 14, 2012 A. Wilson (NCSU Stsatistics) MCMC October 14, 2012 1 / 20 Convergence Diagnostics:

arxiv: v1 [stat.ml] 23 Jan 2019

arxiv:1901.08045v1 [stat.ml] 3 Jan 019 Abstract We consider the problem of sampling from posterior distributions for Bayesian models where some parameters are restricted to be orthogonal matrices. Such

Markov Chain Monte Carlo Methods

Markov Chain Monte Carlo Methods John Geweke University of Iowa, USA 2005 Institute on Computational Economics University of Chicago - Argonne National Laboaratories July 22, 2005 The problem p (θ, ω I)

17 : Optimization and Monte Carlo Methods

10-708: Probabilistic Graphical Models Spring 2017 17 : Optimization and Monte Carlo Methods Lecturer: Avinava Dubey Scribes: Neil Spencer, YJ Choe 1 Recap 1.1 Monte Carlo Monte Carlo methods such as rejection

Bayesian covariate models in extreme value analysis

Bayesian covariate models in extreme value analysis David Randell, Philip Jonathan, Kathryn Turnbull, Mathew Jones EVA 2015 Ann Arbor Copyright 2015 Shell Global Solutions (UK) EVA 2015 Ann Arbor June

On Markov chain Monte Carlo methods for tall data

On Markov chain Monte Carlo methods for tall data Remi Bardenet, Arnaud Doucet, Chris Holmes Paper review by: David Carlson October 29, 2016 Introduction Many data sets in machine learning and computational

Multivariate Normal & Wishart

Multivariate Normal & Wishart Hoff Chapter 7 October 21, 2010 Reading Comprehesion Example Twenty-two children are given a reading comprehsion test before and after receiving a particular instruction method.

Session 5B: A worked example EGARCH model

Session 5B: A worked example EGARCH model John Geweke Bayesian Econometrics and its Applications August 7, worked example EGARCH model August 7, / 6 EGARCH Exponential generalized autoregressive conditional

MCMC Methods: Gibbs and Metropolis

MCMC Methods: Gibbs and Metropolis Patrick Breheny February 28 Patrick Breheny BST 701: Bayesian Modeling in Biostatistics 1/30 Introduction As we have seen, the ability to sample from the posterior distribution

MCMC: Markov Chain Monte Carlo

I529: Machine Learning in Bioinformatics (Spring 2013) MCMC: Markov Chain Monte Carlo Yuzhen Ye School of Informatics and Computing Indiana University, Bloomington Spring 2013 Contents Review of Markov

Bayesian Analysis of Massive Datasets Via Particle Filters

Bayesian Analysis of Massive Datasets Via Particle Filters Bayesian Analysis Use Bayes theorem to learn about model parameters from data Examples: Clustered data: hospitals, schools Spatial models: public

Approximate Bayesian Computation: a simulation based approach to inference

Approximate Bayesian Computation: a simulation based approach to inference Richard Wilkinson Simon Tavaré 2 Department of Probability and Statistics University of Sheffield 2 Department of Applied Mathematics

Lecture 7 and 8: Markov Chain Monte Carlo

Lecture 7 and 8: Markov Chain Monte Carlo 4F13: Machine Learning Zoubin Ghahramani and Carl Edward Rasmussen Department of Engineering University of Cambridge http://mlg.eng.cam.ac.uk/teaching/4f13/ Ghahramani

Item Parameter Calibration of LSAT Items Using MCMC Approximation of Bayes Posterior Distributions

R U T C O R R E S E A R C H R E P O R T Item Parameter Calibration of LSAT Items Using MCMC Approximation of Bayes Posterior Distributions Douglas H. Jones a Mikhail Nediak b RRR 7-2, February, 2! " ##$%#&

Mix & Match Hamiltonian Monte Carlo

Mix & Match Hamiltonian Monte Carlo Elena Akhmatskaya,2 and Tijana Radivojević BCAM - Basque Center for Applied Mathematics, Bilbao, Spain 2 IKERBASQUE, Basque Foundation for Science, Bilbao, Spain MCMSki

STA 4273H: Sta-s-cal Machine Learning

STA 4273H: Sta-s-cal Machine Learning Russ Salakhutdinov Department of Computer Science! Department of Statistical Sciences! rsalakhu@cs.toronto.edu! h0p://www.cs.utoronto.ca/~rsalakhu/ Lecture 2 In our

The University of Auckland Applied Mathematics Bayesian Methods for Inverse Problems : why and how Colin Fox Tiangang Cui, Mike O Sullivan (Auckland),

The University of Auckland Applied Mathematics Bayesian Methods for Inverse Problems : why and how Colin Fox Tiangang Cui, Mike O Sullivan (Auckland), Geoff Nicholls (Statistics, Oxford) fox@math.auckland.ac.nz

Particle Metropolis-Hastings using gradient and Hessian information

Particle Metropolis-Hastings using gradient and Hessian information Johan Dahlin, Fredrik Lindsten and Thomas B. Schön September 19, 2014 Abstract Particle Metropolis-Hastings (PMH) allows for Bayesian

Bayesian Nonparametric Regression for Diabetes Deaths

Bayesian Nonparametric Regression for Diabetes Deaths Brian M. Hartman PhD Student, 2010 Texas A&M University College Station, TX, USA David B. Dahl Assistant Professor Texas A&M University College Station,

Part 1: Expectation Propagation

Chalmers Machine Learning Summer School Approximate message passing and biomedicine Part 1: Expectation Propagation Tom Heskes Machine Learning Group, Institute for Computing and Information Sciences Radboud

Computational statistics

Computational statistics Markov Chain Monte Carlo methods Thierry Denœux March 2017 Thierry Denœux Computational statistics March 2017 1 / 71 Contents of this chapter When a target density f can be evaluated

Principles of Bayesian Inference

Principles of Bayesian Inference Sudipto Banerjee University of Minnesota July 20th, 2008 1 Bayesian Principles Classical statistics: model parameters are fixed and unknown. A Bayesian thinks of parameters

Variational Scoring of Graphical Model Structures

Variational Scoring of Graphical Model Structures Matthew J. Beal Work with Zoubin Ghahramani & Carl Rasmussen, Toronto. 15th September 2003 Overview Bayesian model selection Approximations using Variational

Bayesian inference: what it means and why we care

Bayesian inference: what it means and why we care Robin J. Ryder Centre de Recherche en Mathématiques de la Décision Université Paris-Dauphine 6 November 2017 Mathematical Coffees Robin Ryder (Dauphine)

Computer Vision Group Prof. Daniel Cremers. 10a. Markov Chain Monte Carlo

Group Prof. Daniel Cremers 10a. Markov Chain Monte Carlo Markov Chain Monte Carlo In high-dimensional spaces, rejection sampling and importance sampling are very inefficient An alternative is Markov Chain

Eco517 Fall 2013 C. Sims MCMC. October 8, 2013

Eco517 Fall 2013 C. Sims MCMC October 8, 2013 c 2013 by Christopher A. Sims. This document may be reproduced for educational and research purposes, so long as the copies contain this notice and are retained

Introduction to Stochastic Gradient Markov Chain Monte Carlo Methods

Introduction to Stochastic Gradient Markov Chain Monte Carlo Methods Changyou Chen Department of Electrical and Computer Engineering, Duke University cc448@duke.edu Duke-Tsinghua Machine Learning Summer

Bayes Nets: Sampling

Bayes Nets: Sampling [These slides were created by Dan Klein and Pieter Abbeel for CS188 Intro to AI at UC Berkeley. All CS188 materials are available at http://ai.berkeley.edu.] Approximate Inference:

Lecture 2: From Linear Regression to Kalman Filter and Beyond

Lecture 2: From Linear Regression to Kalman Filter and Beyond January 18, 2017 Contents 1 Batch and Recursive Estimation 2 Towards Bayesian Filtering 3 Kalman Filter and Bayesian Filtering and Smoothing