Molecular Dynamics Simulations of Fusion Materials: Challenges and Opportunities (Recent Developments)

Size: px
Start display at page:

Download "Molecular Dynamics Simulations of Fusion Materials: Challenges and Opportunities (Recent Developments)"

Transcription

1 Molecular Dynamics Simulations of Fusion Materials: Challenges and Opportunities (Recent Developments) Fei Gao

2 Limitations of MD Time scales Length scales (PBC help a lot) Accuracy of forces Classical nuclei

3 Computer Simulation Multi-Scale Ø Time scale for radiation damage evolution and the corresponding simulation methods C + -Si<100> Defect properties BCA Binary Collision Approximation MD Molecular Dynamics KMC Kinetic Monte Carlo

4 Computer Simulation Multi-Scale Ø Time and length scales are always challenging for materials science

5 Can t Just Simulate Everything at Atomic Level: The Human Simulator? Person length scales Size 1 m mols atoms Person time scales Lifetime 100 years 10 9 s Time scale for atomic motions is s, so time step is s Total number of time steps Person simulation At 10 calculations per each atom per each time step we get 10 x x = calculations Present computing capability is teraflop FLOPS (floating point operations per second) Person simulation takes s years.

6 Limitations of MD Rare Events, System Size Rare Events Rare events occur very infrequently, so do not happen on MD time scales. E.g., diffusion (D cm 2 /s) has atom hops only every 10-3 s. Cannot see them with normal MD simulations (can use temperature accelerated MD, but that is an advanced topic). System size Time for a simulation scales with number of atoms, i.e, O(N). Programs can be parallelized to work by spatial decomposition of different regions on different processors Can treat up to atoms, and increasing, but still limited.

7 Need for Accelerated Molecular Dynamics Methods Many important problems lie beyond the timescales accessible to conventional MD, due to the infrequent surface or bulk diffusion mechanisms involved, including: Vapor-deposited thin film growth (metals and semiconductors) especially heteroepitaxial layers Stress-assisted diffusion of point defects, defect clusters, and dislocations Ion implantation or radiation damage annealing

8 Infrequent Event Systems

9 Transition State Theory (TST)

10 Three Recent Methods for Infrequent Events

11 Hyperdynamics: Basic Approach

12 Parallel Replica Dynamics: Basic Concept

13 Temperature Accelerated Dynamics

14 Temperature Accelerated Dynamics Key issue: As TAD relies upon harmonic TST for validity, any anharmonicity error at T high will lead to a corruption of the dynamics.

15 Example of parallel replica hyperdynamics Ag 10 /Ag(111) diffusion Cu/Cu(100) epitaxial growth A. F. Voter, Phys. Rev. Lett. 78, 3908 (1997). 10 monolayers (ML) per second

16 Example of parallel replica hyperdynamics Competing Kinetics and He Bubble Morphology in W W vacancies W interstitial Additional vacancies q Fast and slow growth regimes are defined relative to typical diffusion hopping times of W interstitials around the He bubble L. Sandoval et al. Phys. Rev. Lett. 114, (2015).

17 TAD Example: 1/4 ML Cu/Cu(111) at 150 K M.R. Sørensen and A.F. Voter, J. Chem. Phys. 112, 9599 (2000).

18 Comparison of Different Acceleration Methods

19 Accelerated Molecular Dynamics q Accelerated Dynamics v Hyperdynamics boost potential ΔV(r) v Parallel replica method for dynamics v Temperature accelerated dynamics v Long-time dynamics based on the dimer method v ABC slowly add penalty functions + static relaxation q Issues " Solve the rough potential surface problem for dynamics simulation " Coupling motion of fast and slow dynamics Energy Landscape - Rough Initial Final

20 Steady-State Accelerated MD q SSAMD method (rough potential surface and slow dynamics) Ø Add boost potentials slowly S 6 S 5 A B S 1 S2 S 1 S 2 S 4 S 1 S 3 A B Ø How to determine boost potential during MD simulation Ø In normal MD, increase T - the total vibration magnitude of atoms, driving the system to change state smoothly from A to B, and overcoming the energy barrier to state B A B

21 Basic Ideas q Vibration magnitude of atoms at a given temperature A i =! R i t! R i 0 λ = n i=1 A i λ (nm) λ of 2000 atoms at 400 K in Fe ª The system reaches an equilibrium state λ becomes a constant

22 Basic Ideas q Vibration magnitude of atoms at a given temperature A i =! R i t! R i 0 λ = n i=1 A i λ (nm) 2000 atoms ª The system occupies the different steady states at different temperatures. ª The states approach a continuum function as the increase in temperature is infinitesimal (temperatureinduced states).

23 Basic Ideas q Vibration magnitude of atoms at a given temperature A i =! R i t! R i 0 λ = n i=1 A i λ (nm) 2000 atoms ª The system occupies the different steady states at different temperatures. ª The states approach a continuum function as the increase in temperature is infinitesimal (temperatureinduced states).

24 Ø Form boost potential ΔV = F(λ S ) Basic Ideas λ S = A i,s 1) A i, S - the vibration magnitude of ith atom in S state 2) Activated volume (only boost atoms in the activated volume) AV

25 Boost Potential Ø Two conditions: 1. both the original and biased systems obey transition state theory ΔV Ab (r) = 0 k TST A = v A δ A (r)e βδv b (r) e βδv b (r) A b A b The bias potential vanishes at any dividing surface ΔV(r) Ab = 0 where δ Ab (r) 0 2. Concave boost potential!!"#$ (!!,,!!!" ;!) =!! (!) 1!!!,..,!!!"!!!!(!(!)!!!,..,!!!" )! E b is constant parameter related to state s and we slowly increase E b (t) and q(t)

26 General Picture Ø System evolves from one equilibrium state to another: λ (Å) ª The boost potential allows the system to jump from S 0 S 1 S 2. ª When the system reaches state S 1, the vibration λ reaches to q 1. ª The system can move along the corresponding constant energy contour. q k = q k 1 + dq E b,k = E b,k 1 + de

27 Transition State Ø The time processing involving the boost potential at step k " t k = t MD exp$ ΔVk # k B T % ' & t MD : normal MD time step Ø Determine initial q!!"#$ (!!,,!!!" ;!) =!! (!) 1!!!,..,!!!"!!!!(!(!)!!!,..,!!!" )! At each state, there exists an average value of total vibration magnitude of n atoms: q s0 -> initial λ at a given temperature q S1 -> state S 1 q- k = q k 1 + dq

28 Validate SSAMD q Migration of a mono vacancy in Fe and Surface Diffusion of Clusters in Cu Ø Ackland s potential for Fe and Cu, and Fe-He potential by PNNL Ø Time step 1 fs, Temperature 200 ~ 500 K. Ø MD simulation in the canonical ensemble of NVT is performed to get the initial equilibrium state and determine the initial q (initial λ at a given temperature). Ø Set appropriate dq and de, and add boost potential to system. At each state, the system is relaxed with boost potential and then evolved to next state (dq ~ A and de ~ 0.3 ev). Ø When a transition occurs, the simulation returns to normal MD which will bring the system to another equilibrium state. Ø Repeat the above steps, and explore the potential surface

29 Vacancy Migration One of the 1 st nearest neighbor jumps to vacancy site Fe atom vacancy site Ø At 300 K, a jump ~ 2.8 x 10-5 s Ø 100 jumps ~ 2.8 x 10-3 s E m ~0.6 ev E m (NEB) ~ 0.63 ev (Ackland JPCM)

30 Surface Diffusion of Cu Atom Ø Surface diffusion atoms go underground Nature Materials 2(2003)211

31 Surface Diffusion of Cu Atom Ø Surface diffusion hop-exchange of a dimer T = 300 K Simulation time ~ 5.6 x10-3 s (5.6 ms)

32 Material Issues in Fission and Fusion Reactors Radiation damage defects He accumulation alters microstructures and properties q Annual defect production in fission and fusion reactor environments Defects Fission (LWR) Fusion (3.5 MW/m 2 ) Displacement per atom/year 5 40 Helium (appm/year) Hydrogen (appm/year) Ø Helium has significant effects in fusion structure materials, affecting the global evolution of microstructures and degrading the mechanical properties of materials. Ø One of the most important issues is helium bubble formation and growth

33 HeV 2 Cluster at 400 K q Two paths Path I Fe atom He atom vacancy Ø Both paths are consistent with ab initio calculations (CC Fu, PRB) Ø Vacancy driven migration of the H n V m clusters (m>n) Path II

34 Migration of He n V m Cluster (n>m) q He 6 V 3 (He 9 V 6 ) (a) (b) v2 v1 v3 v4 v1 Vacancy He atom v2 v4 v4 v1 v3 v1 v2 v2 (c) (d) (1) Creation of SIA (2) Orientation change of the dumbbell interstitial to crowdion (3)The crowdion diffuses along the cluster surface Inters88al v3 (4) Combination with original vacancy: V +SIA->0 Ø SIA driven migration of He n V m (n>m) clusters (a two-step mechanism - creation of an SIA and recombination of the SIA with a vacancy)

35 SSAMD Migration of He-V clusters Total diffusion time is around 0.22s. He 6 V 4 T = 500 K He atom Vacancy Interstitial Mass center of He atoms Original mass center of He atoms Ø An self-interstitial atom driven migration

36 Migration of He n V m Cluster (n>m) q Migration energies of He n V m clusters (200, 300, 400 and 500 K) D = D 0 exp( E a k B T ) Ø D 0 and E a for the He 6 V 4 are e+14 and 0.88 ev, respectively. Ø D 0 and E a for the He 9 V 6 are e+13 and 0.87 ev ª The migration energy is close. ª The mechanisms are same for these two He-V clusters.

37 Growth of A He n V m cluster from Small Clusters q He 6 V 4 and He 9 V 6 He 13 V 10 (600K) He atom Vacancy Interstitial (a) He 9 V 6 He 6 V 4 (b) He 9 V 5 (c) He 10 V 7 He 6 V 5 (d) (e) He 13 V 10 (f) He 5 V µs He 2 The temporal vacancy and interstitial are formed: He 6 V 4 - >He 6 V 5 +SIA Mass transfer occurs between them.

38 SSAMD Growth of He-V clusters Total time is around 6.79µs. Interaction between He 9 V 7 and He 6 V 3 T = 600 K He atom Vacancy Interstitial Ø The small He-V disappears and transfers to the larger one Ø Ostwald Ripening (mass transportation) an important mechanism He 13 V 10 38

39 Electronic Effects: Two Temperature Model 39

40 Electronic Effects: Two Temperature Model 40

41 41

42

43

44

45

46

47

Multiscale modelling of D trapping in W

Multiscale modelling of D trapping in W CMS Multiscale modelling of D trapping in W Kalle Heinola, Tommy Ahlgren and Kai Nordlund Department of Physics and Helsinki Institute of Physics University of Helsinki, Finland Contents Background Plasma-wall

More information

3.320 Lecture 23 (5/3/05)

3.320 Lecture 23 (5/3/05) 3.320 Lecture 23 (5/3/05) Faster, faster,faster Bigger, Bigger, Bigger Accelerated Molecular Dynamics Kinetic Monte Carlo Inhomogeneous Spatial Coarse Graining 5/3/05 3.320 Atomistic Modeling of Materials

More information

Local Hyperdynamics. Arthur F. Voter Theoretical Division Los Alamos National Laboratory Los Alamos, NM, USA

Local Hyperdynamics. Arthur F. Voter Theoretical Division Los Alamos National Laboratory Los Alamos, NM, USA Local Hyperdynamics Arthur F. Voter Theoretical Division National Laboratory, NM, USA Summer School in Monte Carlo Methods for Rare Events Division of Applied Mathematics Brown University Providence, RI

More information

Joint ICTP-IAEA Workshop on Physics of Radiation Effect and its Simulation for Non-Metallic Condensed Matter.

Joint ICTP-IAEA Workshop on Physics of Radiation Effect and its Simulation for Non-Metallic Condensed Matter. 2359-16 Joint ICTP-IAEA Workshop on Physics of Radiation Effect and its Simulation for Non-Metallic Condensed Matter 13-24 August 2012 Introduction to atomistic long time scale methods Roger Smith Loughborough

More information

Kinetic Monte Carlo: from transition probabilities to transition rates

Kinetic Monte Carlo: from transition probabilities to transition rates Kinetic Monte Carlo: from transition probabilities to transition rates With MD we can only reproduce the dynamics of the system for 100 ns. Slow thermallyactivated processes, such as diffusion, cannot

More information

Molecular Dynamics and Accelerated Molecular Dynamics

Molecular Dynamics and Accelerated Molecular Dynamics Molecular Dynamics and Accelerated Molecular Dynamics Arthur F. Voter Theoretical Division National Laboratory Lecture 3 Tutorial Lecture Series Institute for Pure and Applied Mathematics (IPAM) UCLA September

More information

Time accelerated Atomic Kinetic Monte Carlo for radiation damage modelling

Time accelerated Atomic Kinetic Monte Carlo for radiation damage modelling PERFORM 60 FP7 Project Time accelerated Atomic Kinetic Monte Carlo for radiation damage modelling C. Domain, C.S. Becquart, R. Ngayam-Happy EDF R&D Dpt Matériaux & Mécanique des Composants Les Renardieres,

More information

First-Passage Kinetic Monte Carlo Algorithm for Complex Reaction-Diffusion Systems

First-Passage Kinetic Monte Carlo Algorithm for Complex Reaction-Diffusion Systems First-Passage Kinetic Monte Carlo Algorithm for Complex Reaction-Diffusion Systems Aleksandar Donev 1 Lawrence Postdoctoral Fellow Lawrence Livermore National Laboratory In collaboration with: Vasily V.

More information

Modeling the sputter deposition of thin film photovoltaics using long time scale dynamics techniques

Modeling the sputter deposition of thin film photovoltaics using long time scale dynamics techniques Loughborough University Institutional Repository Modeling the sputter deposition of thin film photovoltaics using long time scale dynamics techniques This item was submitted to Loughborough University's

More information

Interaction of ion beams with matter

Interaction of ion beams with matter Interaction of ion beams with matter Introduction Nuclear and electronic energy loss Radiation damage process Displacements by nuclear stopping Defects by electronic energy loss Defect-free irradiation

More information

Kinetic Monte Carlo (KMC)

Kinetic Monte Carlo (KMC) Kinetic Monte Carlo (KMC) Molecular Dynamics (MD): high-frequency motion dictate the time-step (e.g., vibrations). Time step is short: pico-seconds. Direct Monte Carlo (MC): stochastic (non-deterministic)

More information

Diffusion mechanisms in Cu grain boundaries

Diffusion mechanisms in Cu grain boundaries PHYSICAL REVIEW B VOLUME 62, NUMBER 6 Diffusion mechanisms in Cu grain boundaries 1 AUGUST 2000-II Mads R. So rensen Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 Yuri

More information

Comparisons of DFT-MD, TB- MD and classical MD calculations of radiation damage and plasmawallinteractions

Comparisons of DFT-MD, TB- MD and classical MD calculations of radiation damage and plasmawallinteractions CMS Comparisons of DFT-MD, TB- MD and classical MD calculations of radiation damage and plasmawallinteractions Kai Nordlund Department of Physics and Helsinki Institute of Physics University of Helsinki,

More information

J. Boisse 1,2, A. De Backer 1,3, C. Domain 4,5, C.S. Becquart 1,4

J. Boisse 1,2, A. De Backer 1,3, C. Domain 4,5, C.S. Becquart 1,4 MODELLING SELF TRAPPING AND TRAP MUTATION IN TUNGSTEN USING DFT AND MOLECULAR DYNAMICS WITH AN EMPIRICAL POTENTIAL BASED ON DFT J. Boisse 1,2, A. De Backer 1,3, C. Domain 4,5, C.S. Becquart 1,4 1 Unité

More information

SCIENCE CHINA Physics, Mechanics & Astronomy

SCIENCE CHINA Physics, Mechanics & Astronomy SCIENCE CHINA Physics, Mechanics & Astronomy Article April 2012 Vol.55 No.4: 614 618 doi: 10.1007/s11433-012-4679-8 Stability and diffusion properties of self-interstitial atoms in tungsten: a first-principles

More information

Molecular Dynamics Saddle Search Adaptive Kinetic Monte Carlo

Molecular Dynamics Saddle Search Adaptive Kinetic Monte Carlo Molecular Dynamics Saddle Search Adaptive Kinetic Monte Carlo Samuel T. Chill and Graeme Henkelman Department of Chemistry and the Institute for Computational Engineering and Sciences, The University of

More information

Cherry-Pit Structures in Binary Immiscible Alloy Under Ion Irradiation

Cherry-Pit Structures in Binary Immiscible Alloy Under Ion Irradiation Cherry-Pit Structures in Binary Immiscible Alloy Under Ion Irradiation Shipeng Shu, Kenneth Tussey May 8, 2011 Abstract We study an special microstructure (matrix atom riched small clusters inside the

More information

Kinetic Monte Carlo modelling of semiconductor growth

Kinetic Monte Carlo modelling of semiconductor growth Kinetic Monte Carlo modelling of semiconductor growth Peter Kratzer Faculty of Physics, University Duisburg-Essen, Germany Time and length scales morphology Ga As 2D islands surface reconstruction Methods

More information

Uniform-acceptance force-biased Monte Carlo: A cheap way to boost MD

Uniform-acceptance force-biased Monte Carlo: A cheap way to boost MD Dresden Talk, March 2012 Uniform-acceptance force-biased Monte Carlo: A cheap way to boost MD Barend Thijsse Department of Materials Science and Engineering Delft University of Technology, The Netherlands

More information

Radiation damage I. Steve Fitzgerald.

Radiation damage I. Steve Fitzgerald. Radiation damage I Steve Fitzgerald http://defects.materials.ox.ac.uk/ Firstly an apology Radiation damage is a vast area of research I cannot hope to cover much in any detail I will try and introduce

More information

DIFFUSION IN SOLIDS. IE-114 Materials Science and General Chemistry Lecture-5

DIFFUSION IN SOLIDS. IE-114 Materials Science and General Chemistry Lecture-5 DIFFUSION IN SOLIDS IE-114 Materials Science and General Chemistry Lecture-5 Diffusion The mechanism by which matter is transported through matter. It is related to internal atomic movement. Atomic movement;

More information

Experience with Moving from Dpa to Changes in Materials Properties

Experience with Moving from Dpa to Changes in Materials Properties Experience with Moving from Dpa to Changes in Materials Properties Meimei Li, Argonne National Laboratory N. V. Mokhov, Fermilab 46 th ICFA Advanced Beam Dynamics Workshop Sept. 27 Oct. 1, 2010 Morschach,

More information

Computing free energy: Replica exchange

Computing free energy: Replica exchange Computing free energy: Replica exchange Extending the scale Length (m) 1 10 3 Potential Energy Surface: {Ri} 10 6 (3N+1) dimensional 10 9 E Thermodynamics: p, T, V, N continuum ls Macroscopic i a t e regime

More information

Lecture 10 Thin Film Growth

Lecture 10 Thin Film Growth Lecture 10 Thin Film Growth 1/76 Announcements Homework: Homework Number 2 is returned today, please pick it up from me at the end of the class. Solutions are online. Homework 3 will be set Thursday (2

More information

MD Thermodynamics. Lecture 12 3/26/18. Harvard SEAS AP 275 Atomistic Modeling of Materials Boris Kozinsky

MD Thermodynamics. Lecture 12 3/26/18. Harvard SEAS AP 275 Atomistic Modeling of Materials Boris Kozinsky MD Thermodynamics Lecture 1 3/6/18 1 Molecular dynamics The force depends on positions only (not velocities) Total energy is conserved (micro canonical evolution) Newton s equations of motion (second order

More information

Two simple lattice models of the equilibrium shape and the surface morphology of supported 3D crystallites

Two simple lattice models of the equilibrium shape and the surface morphology of supported 3D crystallites Bull. Nov. Comp. Center, Comp. Science, 27 (2008), 63 69 c 2008 NCC Publisher Two simple lattice models of the equilibrium shape and the surface morphology of supported 3D crystallites Michael P. Krasilnikov

More information

Derivation of TTT diagrams with kinetic Monte-Carlo simulations

Derivation of TTT diagrams with kinetic Monte-Carlo simulations Derivation of TTT diagrams with kinetic Monte-Carlo simulations A. Gupta, B. Dutta, T. Hickel, J. Neugebauer Department of Computational Materials Design Düsseldorf, Germany 15. September, 2016 BRITS Workshop,

More information

Kinetic Monte Carlo (KMC) Kinetic Monte Carlo (KMC)

Kinetic Monte Carlo (KMC) Kinetic Monte Carlo (KMC) Kinetic Monte Carlo (KMC) Molecular Dynamics (MD): high-frequency motion dictate the time-step (e.g., vibrations). Time step is short: pico-seconds. Direct Monte Carlo (MC): stochastic (non-deterministic)

More information

Modelling of radiation damage in tungsten including He production

Modelling of radiation damage in tungsten including He production Modelling of radiation damage in tungsten including He production C.S. Becquart 1, C. Domain 2 A. De Backer 1 M.F. Barthe 3 M. Hou 4, C. Ortiz 5 1 Unité Matériaux Et Techniques, UMET, UMR 8207, Villeneuve

More information

Computer Simulations and Nanotechnology

Computer Simulations and Nanotechnology Computer Simulations and Nanotechnology Intro: - Making use of high speed modern computers, and therefore nanotechnology - Contributing to the development of nanotechnology Tools: A. Starting from basic

More information

Atomic-Scale Simulations in the Nanoscience of Interfaces

Atomic-Scale Simulations in the Nanoscience of Interfaces Atomic-Scale Simulations in the Nanoscience of Interfaces Kristen A. Fichthorn Departments of Chemical Engineering and Physics The Pennsylvania State University University Park, PA 16802 USA We Care About

More information

Molecular Dynamics & Adaptive Kinetic Monte Carlo Growth Study of Hydrocarbon Flakes

Molecular Dynamics & Adaptive Kinetic Monte Carlo Growth Study of Hydrocarbon Flakes Molecular Dynamics & Adaptive Kinetic Monte Carlo Growth Study of Hydrocarbon Flakes Amit R. Sharma Department of Physics Wright State University Dayton, Ohio, USA amit.sharma@wright.edu Hydrocarbon co-deposits

More information

Advanced sampling. fluids of strongly orientation-dependent interactions (e.g., dipoles, hydrogen bonds)

Advanced sampling. fluids of strongly orientation-dependent interactions (e.g., dipoles, hydrogen bonds) Advanced sampling ChE210D Today's lecture: methods for facilitating equilibration and sampling in complex, frustrated, or slow-evolving systems Difficult-to-simulate systems Practically speaking, one is

More information

Reconstruction and intermixing in thin Ge layers on Si 001

Reconstruction and intermixing in thin Ge layers on Si 001 Reconstruction and intermixing in thin Ge layers on Si 001 L. Nurminen, 1 F. Tavazza, 2 D. P. Landau, 1,2 A. Kuronen, 1 and K. Kaski 1 1 Laboratory of Computational Engineering, Helsinki University of

More information

QUASI-EQUILIBRIUM MONTE-CARLO: OFF-LATTICE KINETIC MONTE CARLO SIMULATION OF HETEROEPITAXY WITHOUT SADDLE POINTS

QUASI-EQUILIBRIUM MONTE-CARLO: OFF-LATTICE KINETIC MONTE CARLO SIMULATION OF HETEROEPITAXY WITHOUT SADDLE POINTS QUASI-EQUILIBRIUM MONTE-CARLO: OFF-LATTICE KINETIC MONTE CARLO SIMULATION OF HETEROEPITAXY WITHOUT SADDLE POINTS Henry A. Boateng University of Michigan, Ann Arbor Joint work with Tim Schulze and Peter

More information

Introduction to Accelerated Molecular Dynamics Methods

Introduction to Accelerated Molecular Dynamics Methods Introduction to Accelerated Molecular Dynamics Methods Danny Perez and Arthur F. Voter Theoretical Division, T-12 Los Alamos National Laboratory Uncertainty Quantification Workshop April 25-26, 2008 Tucson,

More information

Investigations of the effects of 7 TeV proton beams on LHC collimator materials and other materials to be used in the LHC

Investigations of the effects of 7 TeV proton beams on LHC collimator materials and other materials to be used in the LHC Russian Research Center Kurchatov Institute Investigations of the effects of 7 ev proton beams on LHC collimator materials and other materials to be used in the LHC A.I.Ryazanov Aims of Investigations:

More information

Atomistic Front-End Process Modeling

Atomistic Front-End Process Modeling Atomistic Front-End Process Modeling A Powerful Tool for Deep-Submicron Device Fabrication SISPAD 2001, Athens Martin Jaraiz University of Valladolid, Spain Thanks to: P. Castrillo (U. Valladolid) R. Pinacho

More information

Surface Physics Surface Diffusion. Assistant: Dr. Enrico Gnecco NCCR Nanoscale Science

Surface Physics Surface Diffusion. Assistant: Dr. Enrico Gnecco NCCR Nanoscale Science Surface Physics 008 8. Surface Diffusion Assistant: Dr. Enrico Gnecco NCCR Nanoscale Science Random-Walk Motion Thermal motion of an adatom on an ideal crystal surface: - Thermal excitation the adatom

More information

Accelerated Quantum Molecular Dynamics

Accelerated Quantum Molecular Dynamics Accelerated Quantum Molecular Dynamics Enrique Martinez, Christian Negre, Marc J. Cawkwell, Danny Perez, Arthur F. Voter and Anders M. N. Niklasson Outline Quantum MD Current approaches Challenges Extended

More information

Kinetic Monte Carlo: Coarsegraining

Kinetic Monte Carlo: Coarsegraining Kinetic Monte Carlo: Coarsegraining Time and Space Peter Kratzer Faculty of Physics, University Duisburg-Essen, Germany morphology Time and length scales Ga As 2D islands surface reconstruction Methods

More information

NITROGEN CONTAINING ULTRA THIN SiO 2 FILMS ON Si OBTAINED BY ION IMPLANTATION

NITROGEN CONTAINING ULTRA THIN SiO 2 FILMS ON Si OBTAINED BY ION IMPLANTATION NITROGEN CONTAINING ULTRA THIN SiO 2 FILMS ON Si OBTAINED BY ION IMPLANTATION Sashka Petrova Alexandrova 1, Evgenia Petrova Valcheva 2, Rumen Georgiev Kobilarov 1 1 Department of Applied Physics, Technical

More information

Christian Ratsch, UCLA

Christian Ratsch, UCLA Strain Dependence of Microscopic Parameters and its Effects on Ordering during Epitaxial Growth Christian Ratsch, UCLA Institute for Pure and Applied Mathematics, and Department of Mathematics Collaborators:

More information

Statistical study of defects caused by primary knockon atoms in fcc and bcc metals using molecular. dynamics simulations

Statistical study of defects caused by primary knockon atoms in fcc and bcc metals using molecular. dynamics simulations Statistical study of defects caused by primary knockon atoms in fcc and bcc metals using molecular dynamics simulations Manoj Warrier, U. Bhardwaj, H. Hemani (CAD, BARC Vizag, India) S. Bukkuru (Nuclear

More information

Introduction to Semiconductor Physics. Prof.P. Ravindran, Department of Physics, Central University of Tamil Nadu, India

Introduction to Semiconductor Physics. Prof.P. Ravindran, Department of Physics, Central University of Tamil Nadu, India Introduction to Semiconductor Physics 1 Prof.P. Ravindran, Department of Physics, Central University of Tamil Nadu, India http://folk.uio.no/ravi/cmp2013 Review of Semiconductor Physics Semiconductor fundamentals

More information

Kinetic Monte Carlo simulation of nucleation on patterned substrates

Kinetic Monte Carlo simulation of nucleation on patterned substrates PHYSICAL REVIEW B, VOLUME 63, 035407 Kinetic Monte Carlo simulation of nucleation on patterned substrates L. Nurminen, A. Kuronen, and K. Kaski Helsinki University of Technology, Laboratory of Computational

More information

MODELING DEFECT MEDIATED DOPANT DIFFUSION IN SILICON. by Brian T. Puchala

MODELING DEFECT MEDIATED DOPANT DIFFUSION IN SILICON. by Brian T. Puchala MODELING DEFECT MEDIATED DOPANT DIFFUSION IN SILICON by Brian T. Puchala A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Materials Science and

More information

Helium bubbles in bcc Fe and their interactions with irradiation

Helium bubbles in bcc Fe and their interactions with irradiation Loughborough University Institutional Repository Helium bubbles in bcc Fe and their interactions with irradiation This item was submitted to Loughborough University's Institutional Repository by the/an

More information

Kinetic lattice Monte Carlo simulations of diffusion processes in Si and SiGe alloys

Kinetic lattice Monte Carlo simulations of diffusion processes in Si and SiGe alloys Kinetic lattice Monte Carlo simulations of diffusion processes in Si and SiGe alloys, Scott Dunham Department of Electrical Engineering Multiscale Modeling Hierarchy Configuration energies and transition

More information

Atomistic simulations of point defect diffusion in Si and SiGe

Atomistic simulations of point defect diffusion in Si and SiGe Atomistic simulations of point defect diffusion in Si and SiGe P. Pochet, D. Caliste, K. Rushchanskii, F. Lançon & T. Deutsch CEA UJF INAC Institute for Nanoscience and Cryogenics Partially founded by

More information

Fast Monte-Carlo Simulation of Ion Implantation. Binary Collision Approximation Implementation within ATHENA

Fast Monte-Carlo Simulation of Ion Implantation. Binary Collision Approximation Implementation within ATHENA Fast Monte-Carlo Simulation of Ion Implantation Binary Collision Approximation Implementation within ATHENA Contents Simulation Challenges for Future Technologies Monte-Carlo Concepts and Models Atomic

More information

Andrea Morello. Nuclear spin dynamics in quantum regime of a single-molecule. magnet. UBC Physics & Astronomy

Andrea Morello. Nuclear spin dynamics in quantum regime of a single-molecule. magnet. UBC Physics & Astronomy Nuclear spin dynamics in quantum regime of a single-molecule magnet Andrea Morello UBC Physics & Astronomy Kamerlingh Onnes Laboratory Leiden University Nuclear spins in SMMs Intrinsic source of decoherence

More information

Heteroepitaxial growth of Co/ Cu 001 : An accelerated molecular dynamics simulation study

Heteroepitaxial growth of Co/ Cu 001 : An accelerated molecular dynamics simulation study PHYSICAL REVIEW B 72, 035415 2005 Heteroepitaxial growth of Co/ Cu 001 : An accelerated molecular dynamics simulation study Radu A. Miron Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6,

More information

Atomistic simulations on the mobility of di- and tri-interstitials in Si

Atomistic simulations on the mobility of di- and tri-interstitials in Si Atomistic simulations on the mobility of di- and tri-interstitials in Si related publications (since 2001): Posselt, M., Gao, F., Zwicker, D., Atomistic study of the migration of di- and tri-interstitials

More information

Why Heteroepitaxy? Difficult to Model Multiple Species Dislocations and point defects important Species Flux important

Why Heteroepitaxy? Difficult to Model Multiple Species Dislocations and point defects important Species Flux important Why Heteroepitaxy? Difficult to Model Multiple Species Dislocations and point defects important Species Flux important The Silicon Age is Ending New materials and growth required Useful in design of Devices

More information

LECTURE 11: Monte Carlo Methods III

LECTURE 11: Monte Carlo Methods III 1 LECTURE 11: Monte Carlo Methods III December 3, 2012 In this last chapter, we discuss non-equilibrium Monte Carlo methods. We concentrate on lattice systems and discuss ways of simulating phenomena such

More information

Molecular dynamics simulations of the clustering and dislocation loop punching behaviors of noble gas atoms in tungsten

Molecular dynamics simulations of the clustering and dislocation loop punching behaviors of noble gas atoms in tungsten Molecular dynamics simulations of the clustering and dislocation loop punching behaviors of noble gas atoms in tungsten J.Z.Fang, F.Zhou, H.Q.Deng, X.L.Gan, S.F.Xiao, W.Y.Hu Hunan University Contents I,

More information

Multiscale Modeling of Epitaxial Growth Processes: Level Sets and Atomistic Models

Multiscale Modeling of Epitaxial Growth Processes: Level Sets and Atomistic Models Multiscale Modeling of Epitaxial Growth Processes: Level Sets and Atomistic Models Russel Caflisch 1, Mark Gyure 2, Bo Li 4, Stan Osher 1, Christian Ratsch 1,2, David Shao 1 and Dimitri Vvedensky 3 1 UCLA,

More information

Kinetics. Rate of change in response to thermodynamic forces

Kinetics. Rate of change in response to thermodynamic forces Kinetics Rate of change in response to thermodynamic forces Deviation from local equilibrium continuous change T heat flow temperature changes µ atom flow composition changes Deviation from global equilibrium

More information

Potentials, periodicity

Potentials, periodicity Potentials, periodicity Lecture 2 1/23/18 1 Survey responses 2 Topic requests DFT (10), Molecular dynamics (7), Monte Carlo (5) Machine Learning (4), High-throughput, Databases (4) NEB, phonons, Non-equilibrium

More information

Progress Report on Chamber Dynamics and Clearing

Progress Report on Chamber Dynamics and Clearing Progress Report on Chamber Dynamics and Clearing Farrokh Najmabadi, Rene Raffray, Mark S. Tillack, John Pulsifer, Zoran Dragovlovic (UCSD) Ahmed Hassanein (ANL) Laser-IFE Program Workshop May31-June 1,

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION Supplementary Information Figure S1: (a) Initial configuration of hydroxyl and epoxy groups used in the MD calculations based on the observations of Cai et al. [Ref 27 in the

More information

Dopant and Self-Diffusion in Semiconductors: A Tutorial

Dopant and Self-Diffusion in Semiconductors: A Tutorial Dopant and Self-Diffusion in Semiconductors: A Tutorial Eugene Haller and Hughes Silvestri MS&E, UCB and LBNL FLCC Tutorial 1/26/04 1 FLCC Outline Motivation Background Fick s Laws Diffusion Mechanisms

More information

Module 16. Diffusion in solids II. Lecture 16. Diffusion in solids II

Module 16. Diffusion in solids II. Lecture 16. Diffusion in solids II Module 16 Diffusion in solids II Lecture 16 Diffusion in solids II 1 NPTEL Phase II : IIT Kharagpur : Prof. R. N. Ghosh, Dept of Metallurgical and Materials Engineering Keywords: Micro mechanisms of diffusion,

More information

FEEDBACK CONTROL OF GROWTH RATE AND SURFACE ROUGHNESS IN THIN FILM GROWTH. Yiming Lou and Panagiotis D. Christofides

FEEDBACK CONTROL OF GROWTH RATE AND SURFACE ROUGHNESS IN THIN FILM GROWTH. Yiming Lou and Panagiotis D. Christofides FEEDBACK CONTROL OF GROWTH RATE AND SURFACE ROUGHNESS IN THIN FILM GROWTH Yiming Lou and Panagiotis D. Christofides Department of Chemical Engineering University of California, Los Angeles IEEE 2003 Conference

More information

Defects and diffusion in metal oxides: Challenges for first-principles modelling

Defects and diffusion in metal oxides: Challenges for first-principles modelling Defects and diffusion in metal oxides: Challenges for first-principles modelling Karsten Albe, FG Materialmodellierung, TU Darmstadt Johan Pohl, Peter Agoston, Paul Erhart, Manuel Diehm FUNDING: ICTP Workshop

More information

Physics 53. Thermal Physics 1. Statistics are like a bikini. What they reveal is suggestive; what they conceal is vital.

Physics 53. Thermal Physics 1. Statistics are like a bikini. What they reveal is suggestive; what they conceal is vital. Physics 53 Thermal Physics 1 Statistics are like a bikini. What they reveal is suggestive; what they conceal is vital. Arthur Koestler Overview In the following sections we will treat macroscopic systems

More information

Comparison of deuterium retention for ion-irradiated and neutronirradiated

Comparison of deuterium retention for ion-irradiated and neutronirradiated 13th International Workshop on Plasma-Facing Materials and Components for Fusion Applications / 1st International Conference on Fusion Energy Materials Science Comparison of deuterium retention for ion-irradiated

More information

Dynamical simulations of radiation damage and defect mobility in MgO

Dynamical simulations of radiation damage and defect mobility in MgO PHYSICAL REVIEW B 71, 104102 2005 Dynamical simulations of radiation damage and defect mobility in MgO B. P. Uberuaga, 1 R. Smith, 1, * A. R. Cleave, 2 G. Henkelman, 1 R. W. Grimes, 2 A. F. Voter, 1 and

More information

Simple atomistic modeling of dominant B m I n clusters in boron diffusion

Simple atomistic modeling of dominant B m I n clusters in boron diffusion Molecular Simulation, Vol. 31, No. 12, 15 October 2005, 817 824 Simple atomistic modeling of dominant B m I n clusters in boron diffusion J.-H. YOO, C.-O. HWANG, B.-J. KIM and T. WON* Department of Electrical

More information

Modelling of the diffusion of self-interstitial atom clusters in Fe-Cr alloys

Modelling of the diffusion of self-interstitial atom clusters in Fe-Cr alloys Modelling of the diffusion of self-interstitial atom clusters in Fe-Cr alloys Dmitry Terentyev, Lorenzo Malerba, Alexander V Barashev To cite this version: Dmitry Terentyev, Lorenzo Malerba, Alexander

More information

Outlook: Application of Positron Annihilation for defects investigations in thin films. Introduction to Positron Annihilation Methods

Outlook: Application of Positron Annihilation for defects investigations in thin films. Introduction to Positron Annihilation Methods Application of Positron Annihilation for defects investigations in thin films V. Bondarenko, R. Krause-Rehberg Martin-Luther-University Halle-Wittenberg, Halle, Germany Outlook: Introduction to Positron

More information

Introduction To Materials Science FOR ENGINEERS, Ch. 5. Diffusion. MSE 201 Callister Chapter 5

Introduction To Materials Science FOR ENGINEERS, Ch. 5. Diffusion. MSE 201 Callister Chapter 5 Diffusion MSE 201 Callister Chapter 5 1 Goals: Diffusion - how do atoms move through solids? Fundamental concepts and language Diffusion mechanisms Vacancy diffusion Interstitial diffusion Impurities Diffusion

More information

L. Gámez a, B. Gámez a, M.J. Caturla b '*, D. Terentyev c, J.M. Perlado 3 ABSTRACT

L. Gámez a, B. Gámez a, M.J. Caturla b '*, D. Terentyev c, J.M. Perlado 3 ABSTRACT Object Kinetic Monte Carlo calculations of irradiated Fe-Cr dilute alloys: The effect of the interaction radius between substitutional Cr and self-interstitial Fe L. Gámez a, B. Gámez a, M.J. Caturla b

More information

The samples used in these calculations were arranged as perfect diamond crystal of

The samples used in these calculations were arranged as perfect diamond crystal of Chapter 5 Results 5.1 Hydrogen Diffusion 5.1.1 Computational Details The samples used in these calculations were arranged as perfect diamond crystal of a2 2 2 unit cells, i.e. 64 carbon atoms. The effect

More information

Fundamental science and synergy of multi-species surface interactions in high-plasma--flux environments

Fundamental science and synergy of multi-species surface interactions in high-plasma--flux environments Fundamental science and synergy of multi-species surface interactions in high-plasma--flux environments Our thanks to John Hogan Managed by UT-Battelle for the Department of Energy ReNew PMI, UCLA, March

More information

Lecture 1 Modeling and simulation for the growth of thin films

Lecture 1 Modeling and simulation for the growth of thin films Lecture 1 Modeling and simulation for the growth of thin films Russel Caflisch Mathematics Department Materials Science and Engineering Department UCLA & IPAM www.math.ucla.edu/~material 1 Outline Epitaxial

More information

collisions of electrons. In semiconductor, in certain temperature ranges the conductivity increases rapidly by increasing temperature

collisions of electrons. In semiconductor, in certain temperature ranges the conductivity increases rapidly by increasing temperature 1.9. Temperature Dependence of Semiconductor Conductivity Such dependence is one most important in semiconductor. In metals, Conductivity decreases by increasing temperature due to greater frequency of

More information

Study of semiconductors with positrons. Outlook:

Study of semiconductors with positrons. Outlook: Study of semiconductors with positrons V. Bondarenko, R. Krause-Rehberg Martin-Luther-University Halle-Wittenberg, Halle, Germany Introduction Positron trapping into defects Methods of positron annihilation

More information

Multi-scale Modeling of Radiation Damage: Large Scale Data Analysis

Multi-scale Modeling of Radiation Damage: Large Scale Data Analysis Journal of Physics: Conference Series PAPER OPEN ACCESS Multi-scale Modeling of Radiation Damage: Large Scale Data Analysis To cite this article: M Warrier et al 2016 J. Phys.: Conf. Ser. 759 012078 View

More information

Energy Barriers and Rates - Transition State Theory for Physicists

Energy Barriers and Rates - Transition State Theory for Physicists Energy Barriers and Rates - Transition State Theory for Physicists Daniel C. Elton October 12, 2013 Useful relations 1 cal = 4.184 J 1 kcal mole 1 = 0.0434 ev per particle 1 kj mole 1 = 0.0104 ev per particle

More information

In#uence of microstructure of substrate surface on early stage of thin "lm growth

In#uence of microstructure of substrate surface on early stage of thin lm growth Vacuum 56 (2000) 185}190 In#uence of microstructure of substrate surface on early stage of thin "lm growth Helin Wei*, Zuli Liu, Kailun Yao Department of Physics, Huazhong University of Science and Technology.

More information

Thermally Activated Processes

Thermally Activated Processes General Description of Activated Process: 1 Diffusion: 2 Diffusion: Temperature Plays a significant role in diffusion Temperature is not the driving force. Remember: DRIVING FORCE GRADIENT of a FIELD VARIALE

More information

ESE 372 / Spring 2013 / Lecture 5 Metal Oxide Semiconductor Field Effect Transistor

ESE 372 / Spring 2013 / Lecture 5 Metal Oxide Semiconductor Field Effect Transistor Metal Oxide Semiconductor Field Effect Transistor V G V G 1 Metal Oxide Semiconductor Field Effect Transistor We will need to understand how this current flows through Si What is electric current? 2 Back

More information

Nucleation theory and the early stages of thin film growth

Nucleation theory and the early stages of thin film growth Nucleation theory and the early stages of thin film growth C. Ratsch a) Department of Mathematics, University of California, Los Angeles, California 90095-1555 J. A. Venables Department of Physics and

More information

Predicting the Dislocation Nucleation Rate as a Function of Temperature and Stress. Abstract

Predicting the Dislocation Nucleation Rate as a Function of Temperature and Stress. Abstract Journal of Materials Research, Invited Feature Article, in press (2011) Predicting the Dislocation Nucleation Rate as a Function of Temperature and Stress Seunghwa Ryu 1, Keonwook Kang 2, and Wei Cai 3

More information

Available online at ScienceDirect. Physics Procedia 71 (2015 ) 30 34

Available online at  ScienceDirect. Physics Procedia 71 (2015 ) 30 34 Available online at www.sciencedirect.com ScienceDirect Physics Procedia 71 (2015 ) 30 34 18th Conference on Plasma-Surface Interactions, PSI 2015, 5-6 February 2015, Moscow, Russian Federation and the

More information

A dimer method for finding saddle points on high dimensional potential surfaces using only first derivatives

A dimer method for finding saddle points on high dimensional potential surfaces using only first derivatives JOURNAL OF CHEMICAL PHYSICS VOLUME 111, NUMBER 15 15 OCTOBER 1999 A dimer method for finding saddle points on high dimensional potential surfaces using only first derivatives Graeme Henkelman and Hannes

More information

Upper Critical Dimension for Irreversible Cluster Nucleation and Growth. Abstract

Upper Critical Dimension for Irreversible Cluster Nucleation and Growth. Abstract Upper Critical Dimension for Irreversible Cluster Nucleation and Growth Feng Shi, Yunsic Shim, and Jacques G. Amar Department of Physics & Astronomy University of Toledo, Toledo, OH 43606 (Dated: December

More information

Monte Carlo simulation of thin-film growth on a surface with a triangular lattice

Monte Carlo simulation of thin-film growth on a surface with a triangular lattice Vacuum 52 (1999) 435 440 Monte Carlo simulation of thin-film growth on a surface with a triangular lattice Wei Helin*, Liu Zuli, Yao Kailun Department of Physics, Huazhong University of Science and Technology,

More information

31704 Dynamic Monte Carlo modeling of hydrogen isotope. reactive-diffusive transport in porous graphite

31704 Dynamic Monte Carlo modeling of hydrogen isotope. reactive-diffusive transport in porous graphite 31704 Dynamic Monte Carlo modeling of hydrogen isotope reactive-diffusive transport in porous graphite * R. Schneider a, A. Rai a, A. Mutzke a, M. Warrier b,e. Salonen c, K. Nordlund d a Max-Planck-Institut

More information

Modeling the Free Energy Landscape for Janus Particle Self-Assembly in the Gas Phase. Andy Long Kridsanaphong Limtragool

Modeling the Free Energy Landscape for Janus Particle Self-Assembly in the Gas Phase. Andy Long Kridsanaphong Limtragool Modeling the Free Energy Landscape for Janus Particle Self-Assembly in the Gas Phase Andy Long Kridsanaphong Limtragool Motivation We want to study the spontaneous formation of micelles and vesicles Applications

More information

First passage time Markov chain analysis of rare events for kinetic Monte Carlo: double kink nucleation during dislocation glide

First passage time Markov chain analysis of rare events for kinetic Monte Carlo: double kink nucleation during dislocation glide INSTITUTE OF PHYSICS PUBLISHING MODELLING AND SIMULATION IN MATERIALS SCIENCE AND ENGINEERING Modelling Simul. Mater. Sci. Eng. 10 (2002) 581 596 PII: S0965-0393(02)39232-5 First passage time Markov chain

More information

Diffusion in Dilute Alloys

Diffusion in Dilute Alloys Chapter 3 Diffusion in Dilute Alloys Our discussion of the atomistic mechanisms for diffusion has been confined to the situations where the diffusing species is chemically identical to the host atom. We

More information

Kinetic Monte Carlo simulation of semiconductor quantum dot growth

Kinetic Monte Carlo simulation of semiconductor quantum dot growth Solid State Phenomena Online: 2007-03-15 ISSN: 1662-9779, Vols. 121-123, pp 1073-1076 doi:10.4028/www.scientific.net/ssp.121-123.1073 2007 Trans Tech Publications, Switzerland Kinetic Monte Carlo simulation

More information

Computational Applications in Nuclear Astrophysics using JAVA

Computational Applications in Nuclear Astrophysics using JAVA Computational Applications in Nuclear Astrophysics using JAVA Lecture: Friday 10:15-11:45 Room NB 6/99 Jim Ritman and Elisabetta Prencipe j.ritman@fz-juelich.de e.prencipe@fz-juelich.de Computer Lab: Friday

More information

Part III. Cellular Automata Simulation of. Monolayer Surfaces

Part III. Cellular Automata Simulation of. Monolayer Surfaces Part III Cellular Automata Simulation of Monolayer Surfaces The concept of progress acts as a protective mechanism to shield us from the terrors of the future. the words of Paul Muad Dib 193 Chapter 6

More information

High-Temperature Criticality in Strongly Constrained Quantum Systems

High-Temperature Criticality in Strongly Constrained Quantum Systems High-Temperature Criticality in Strongly Constrained Quantum Systems Claudio Chamon Collaborators: Claudio Castelnovo - BU Christopher Mudry - PSI, Switzerland Pierre Pujol - ENS Lyon, France PRB 2006

More information

Monte Carlo. Lecture 15 4/9/18. Harvard SEAS AP 275 Atomistic Modeling of Materials Boris Kozinsky

Monte Carlo. Lecture 15 4/9/18. Harvard SEAS AP 275 Atomistic Modeling of Materials Boris Kozinsky Monte Carlo Lecture 15 4/9/18 1 Sampling with dynamics In Molecular Dynamics we simulate evolution of a system over time according to Newton s equations, conserving energy Averages (thermodynamic properties)

More information

Theoretical Studies of Self-Diffusion and Dopant Clustering in Semiconductors

Theoretical Studies of Self-Diffusion and Dopant Clustering in Semiconductors phys. stat. sol. (b) 233, No., 24 30 (2002) Theoretical Studies of Self-Diffusion and Dopant Clustering in Semiconductors B. P. Uberuaga )(a), G. Henkelman (b), H. Jónsson (b, c), S. T. Dunham (d), W.

More information