Preparations and Starting the program

Size: px
Start display at page:

Download "Preparations and Starting the program"

Transcription

1 Preparations and Starting the program

2 1) Create a working directory on your computer for your Chemkin work, and 2) download kinetic mechanism files AAUmech.inp and AAUtherm.dat into your working directory Click to get

3 Start / launch the software Chemkin 2 3 1

4 Start a new Chemkin project

5 1) Close whatever project is by default open 2) Create New project, provide Project Name

6 Save project 1) Under Project tab, select Save Save project 2) Save in your working directory

7 Choose reactor into your project

8 As result of 1) these apperar As result of 2) this 1) From the Models panel click Plug Flow Reactor icon 2) Under Miscellaneous, click Outlet Flow icon 3) You can move the icons around in the Diagram View panel 4) To connect the Plug Flow Reactor (PFR) to the Outflow, place the mouse/cursor on the edge of the PFR icon (the mouse turns into a cross. Press down the left mouse button and draw a line from the PFR to the Outflow (see next slide for how result should look like)

9 1 PFR connected to Outflow After pressing 2) Update Project, the screen should look something like this 3 PFR with inlet and outflow connected Project tab 2

10 Import and pre-process chemistry

11 2) Browse to your working directory 1) Double-click Pre-Processing 2) When there, press Select

12 3) Select Gas-Phase Kinetics File 4) Press Open/Create 1) Click New Chemistry Set 2) Select the ÅA mechanism files that you downloaded: Gas-Phase Kinetics File, and Thermodynamics file

13 1) After selecting both mechanism files, provide a name for the new mechanism 2) Press SaveAs, and save in your working directory

14 1) Press Run Pre-Processor (Run Calculations should become black = available for use) 2) Close Pre-Processing tab 3) You are now ready to start defining calculation conditions and calculation input Before that, Save your project

15 Defining reactor parameters and input species

16 1) Double-click PFR (C1) to open selection tree. Under C1_PFR you can define reactor conditions, and C1_Inlet1 you can use to define input gas species 2) Double-click C1_PFR, and choose Fix Gas Temperature. This choice defines the PFR to have a constant temperature. Next slide shows the panel that opens after you have chosen problem type. To note: Selecting Solve Gas Energy Equation results in gas temperature changing as result of chemical reaction (heat release). Depending on the purpose of your calculation, you can choose this when needed.

17 In this panel you can define reactor conditions 1) Constant temperature or solve temperature 2) Length of reactor (and units) 3) The reactor needs to a have a numeric value for the diameter. We will later define inflow as velocity, so the diameter value does not affect our calculation results 4) Reactor temperature. This is either the fixed temperature value, or the starting temperature, depending on if the energy equation is solved or not 5) Pressure, 1 atm or 1 bar 6) To close panel

18 4) Select the Species-specific Properties panel (see next slide) 3) Set gas velocity. The gas velosity in combination with the reactor length determine the reactor residence time (sec) 1) Double-click C1_Inlet1 2) Press OK to this

19 Provide input species 1) For example a ) choose to define amounts in mole fraction / mole b) write O2 in Species field c) the amount 2 in the Data field d) press the Add button 2) Input species for methane combustion with air at air factor 1 3) You can press Normalize, which normalizes the input to sum to 1. This is equivalent to having mole fractions 4) Close the C1_Inlet1 panel (cross in upper-right corner) These correspond to stoichimetry 1 mol CH4 + 2 mol O2 + 2/21*79 mol N2 1 mol CH4 + 2 mol O mol N2

20 Running calculation and plotting results

21 2 1 1) Double-click Run Calculations 2) Press Begin

22 1) Maintain default option to Plot Results by Selecting New Settings 2) Press Nex Step

23 1) Maintan default options. If you want you can scroll down to see what options can be selected Var refers to variable, for example species mole fractions and temperature ROP refers to Rate-of-Production, which is the reaction rates 2) Press Process Solution Data

24 Options for presenting / managing results 1) Tabs for type of plot, or for export results 2) For the line plot (xy-plot) x-variable (choose distance or res. time) y-variable (choose one or several species) or temperature

25 1) To select several species have the Ctrl button pressed down while selecting the species. Select for example CH4, CO, CO2, H2, H2O, O2 (these are in different order in the menu) 2) Press Create Plot

26 You can zoom in on the profiles by pressing the mouse wheel down and selecting the area by drawing a rectangle from the top-left corner to bottom-right corner. To zoom out, do the opposite: rectangle from bottom-right to top-left You can also go back to reactor parameters and define the reactor length to be longer or shorter After testing, close plot window, and close also other windows related to result plotting.

27 Calculating by solving also the energy equation

28 3) Close C1_PFR panel 2) Choose to Solve Gas Energy Equation 1) Double-click C1_PFR

29 2) Press Begin 1) Double-click Run Calculations 3) Plot using Previous Settings (press Next Step) Here you can choose other settings as needed, but the Previous Setting should be ok for the Purpose of this exercise

30

31 Alternatives for result treatment

32 You can test plotting species mole fractions on logarithmic scale (y-axis) For example CH 4 is not in the strictest sense zero. However, for practical purposes a mole fraction of 1E-15 can be considered zero

33 To export results to, for example, be read into Excel 1) Choose Export Variables tab 2) Select variables to be exported 3) Choose where to export the data to (your working directory is default). give file name, and press Save 4) Press Export

34 You are now ready to start working on the exercise At this point, save your project before continuing. This way you have something to go back to, in case the program crashes etc.

35 Task 1: Methane combustion Methane combustion at 1000 C 1) Calculate input (mol) of CH 4, O 2, and N 2 depending on air factor 2) Set up and carry out kinetics calculations using Chemkin: - plug flow reactor length 10 m, - axial velocity 10 m/s, - constant temperature at 1000 C - species input depending on air factor 3) What is the final (chemical equilibrium) gas composition? Update the table below and plot your results in Excel (species mole fractions as function of air factor) Air factor T ( C) Mole fractions O 2 CH 4 CO CO 2 H 2 H 2 O

36 Task 2: Methane combustion Use you model to estimate how quickly a pre-mixed mixture of methane and air would burn if the initial temperature was 1000 C and the gas velocity is 10 m/s. To judge when combustion is completed, you can use as criteria that CH 4, CO, CO 2 have leveled out and their mole fractions are not changing. Note this location in the PFR in terms of distance along the PFR and as time (residence time). This correspond to having a Bunsen burner with gas flow 10 m/s, and seeing how far (or short ) the gas needs to travel from the burner nozzle before combustion is completed. The point is not to fixate on decimals, but instead to be able to say in which kind of range the time needed for complete combustion is (order of magnitude, is it 1 millisecond, 1 second, or 10 seconds) You should be able to use the model from the previous task: - Calculate methane combustion in air at air factor Test the sensitivity of your calculations to temperature by keeping temperature constant and doing calculations using temperatures of 600, 800, 1000, 1200 C

37 Task 3: study NOx chemistry Step 1: Use the model from previous tasks to study to which extent NH 3 forms NO, depending on O 2 level. Consider O 2 at 1vol-% and at 20 vol-% Chemkin input Mixture mol O mol N 2-100E-6 mol NH 3 (when you normalize this, these approximatily 100 ppm NH 3 in approximately 20 vol-% O2) Mixture mol O mol N 2-100E-6 mol NH 3 For both cases (mixtures) plot NH 3 and NO in the same plot, and note to which extent NH 3 forms NO (approximately which per cent of NH 3 forms NO)

Stoichiometric Reactor Simulation Robert P. Hesketh and Concetta LaMarca Chemical Engineering, Rowan University (Revised 4/8/09)

Stoichiometric Reactor Simulation Robert P. Hesketh and Concetta LaMarca Chemical Engineering, Rowan University (Revised 4/8/09) Stoichiometric Reactor Simulation Robert P. Hesketh and Concetta LaMarca Chemical Engineering, Rowan University (Revised 4/8/09) In this session you will learn how to create a stoichiometric reactor model

More information

Athena Visual Software, Inc. 1

Athena Visual Software, Inc. 1 Athena Visual Studio Visual Kinetics Tutorial VisualKinetics is an integrated tool within the Athena Visual Studio software environment, which allows scientists and engineers to simulate the dynamic behavior

More information

You w i ll f ol l ow these st eps : Before opening files, the S c e n e panel is active.

You w i ll f ol l ow these st eps : Before opening files, the S c e n e panel is active. You w i ll f ol l ow these st eps : A. O pen a n i m a g e s t a c k. B. Tr a c e t h e d e n d r i t e w i t h t h e user-guided m ode. C. D e t e c t t h e s p i n e s a u t o m a t i c a l l y. D. C

More information

Aspen Plus PFR Reactors Tutorial using Styrene with Pressure Drop Considerations By Robert P. Hesketh and Concetta LaMarca Spring 2005

Aspen Plus PFR Reactors Tutorial using Styrene with Pressure Drop Considerations By Robert P. Hesketh and Concetta LaMarca Spring 2005 Aspen Plus PFR Reactors Tutorial using Styrene with Pressure Drop Considerations By Robert P. Hesketh and Concetta LaMarca Spring 2005 In this laboratory we will incorporate pressure-drop calculations

More information

Objective: To Evaluate Predictions of Alternative Models

Objective: To Evaluate Predictions of Alternative Models www.optience.com Methanol Synthesis Objective: To Evaluate Predictions of Alternative Models In this example, we propose and evaluate Mass Action and Langmuir Hinshelwood (LHHW) models for methanol synthesis

More information

How to use CHEMKIN. 1. To open a Chemkin Window. 1) logon Athena. 2) At the Athena prompt, type athena % add chemkin athena % chemkin

How to use CHEMKIN. 1. To open a Chemkin Window. 1) logon Athena. 2) At the Athena prompt, type athena % add chemkin athena % chemkin 1. To open a Chemkin Window 1) logon Athena How to use CHEMKIN 2) At the Athena prompt, type athena % add chemkin athena % chemkin 3) The following Chemkin window will pop up. Figure 1 Chemkin window 4)

More information

How to Perform a Site Based Plant Search

How to Perform a Site Based Plant Search PlantSelector Help Use PlantSelector to get detailed information and photos of plants by: Searching for plants that will grow well at your planting site. How do I do this? OR Searching for plants with

More information

(THIS IS AN OPTIONAL BUT WORTHWHILE EXERCISE)

(THIS IS AN OPTIONAL BUT WORTHWHILE EXERCISE) PART 2: Analysis in ArcGIS (THIS IS AN OPTIONAL BUT WORTHWHILE EXERCISE) Step 1: Start ArcCatalog and open a geodatabase If you have a shortcut icon for ArcCatalog on your desktop, double-click it to start

More information

Getting started with BatchReactor Example : Simulation of the Chlorotoluene chlorination

Getting started with BatchReactor Example : Simulation of the Chlorotoluene chlorination Getting started with BatchReactor Example : Simulation of the Chlorotoluene chlorination 2011 ProSim S.A. All rights reserved. Introduction This document presents the different steps to follow in order

More information

NMR Predictor. Introduction

NMR Predictor. Introduction NMR Predictor This manual gives a walk-through on how to use the NMR Predictor: Introduction NMR Predictor QuickHelp NMR Predictor Overview Chemical features GUI features Usage Menu system File menu Edit

More information

General Chemistry Lab Molecular Modeling

General Chemistry Lab Molecular Modeling PURPOSE The objectives of this experiment are PROCEDURE General Chemistry Lab Molecular Modeling To learn how to use molecular modeling software, a commonly used tool in chemical research and industry.

More information

GIS Workshop UCLS_Fall Forum 2014 Sowmya Selvarajan, PhD TABLE OF CONTENTS

GIS Workshop UCLS_Fall Forum 2014 Sowmya Selvarajan, PhD TABLE OF CONTENTS TABLE OF CONTENTS TITLE PAGE NO. 1. ArcGIS Basics I 2 a. Open and Save a Map Document 2 b. Work with Map Layers 2 c. Navigate in a Map Document 4 d. Measure Distances 4 2. ArcGIS Basics II 5 a. Work with

More information

Watershed Modeling Orange County Hydrology Using GIS Data

Watershed Modeling Orange County Hydrology Using GIS Data v. 10.0 WMS 10.0 Tutorial Watershed Modeling Orange County Hydrology Using GIS Data Learn how to delineate sub-basins and compute soil losses for Orange County (California) hydrologic modeling Objectives

More information

Computational Chemistry Lab Module: Conformational Analysis of Alkanes

Computational Chemistry Lab Module: Conformational Analysis of Alkanes Introduction Computational Chemistry Lab Module: Conformational Analysis of Alkanes In this experiment, we will use CAChe software package to model the conformations of butane, 2-methylbutane, and substituted

More information

Burning a Hydrocarbon II

Burning a Hydrocarbon II Burning a Hydrocarbon II Name Lab Section Problem Statement: How are the masses of products limited by the amounts of reactants? I. Data Collection: A. Go to http://cheminfo.chem.ou.edu/~mra/home.html

More information

Tutorial: Premixed Flow in a Conical Chamber using the Finite-Rate Chemistry Model

Tutorial: Premixed Flow in a Conical Chamber using the Finite-Rate Chemistry Model Tutorial: Premixed Flow in a Conical Chamber using the Finite-Rate Chemistry Model Introduction The purpose of this tutorial is to provide guidelines and recommendations for setting up and solving the

More information

Molecular Modeling and Conformational Analysis with PC Spartan

Molecular Modeling and Conformational Analysis with PC Spartan Molecular Modeling and Conformational Analysis with PC Spartan Introduction Molecular modeling can be done in a variety of ways, from using simple hand-held models to doing sophisticated calculations on

More information

Experiment: Oscillations of a Mass on a Spring

Experiment: Oscillations of a Mass on a Spring Physics NYC F17 Objective: Theory: Experiment: Oscillations of a Mass on a Spring A: to verify Hooke s law for a spring and measure its elasticity constant. B: to check the relationship between the period

More information

Polar alignment in 5 steps based on the Sánchez Valente method

Polar alignment in 5 steps based on the Sánchez Valente method 1 Polar alignment in 5 steps based on the Sánchez Valente method Compared to the drift alignment method, this one, allows you to easily achieve a perfect polar alignment in just one step. By "perfect polar

More information

Structures in the Magnetosphere 2. Hover the curser over a point on the image. The coordinates and value at that point should appear.

Structures in the Magnetosphere 2. Hover the curser over a point on the image. The coordinates and value at that point should appear. Investigating the Magnetosphere Introduction In this investigation, you will explore the properties of the regions of the magnetosphere using simulation results from the BATS-R-US model from the magnetosphere

More information

Cantera / Stancan Primer

Cantera / Stancan Primer Cantera / Stancan Primer Matthew Campbell; A.J. Simon; Chris Edwards Introduction to Cantera and Stancan Cantera is an open-source, object-oriented software package which performs chemical and thermodynamic

More information

1. Starting of a project and entering of basic initial data.

1. Starting of a project and entering of basic initial data. PROGRAM VISIMIX TURBULENT SV. Example 1. Contents. 1. Starting of a project and entering of basic initial data. 1.1. Opening a Project. 1.2. Entering dimensions of the tank. 1.3. Entering baffles. 1.4.

More information

Esterification in a PFR with Aspen Plus V8.0

Esterification in a PFR with Aspen Plus V8.0 Esterification in a PFR with Aspen Plus V8.0 1. Lesson Objectives Use Aspen Plus to determine whether a given reaction is technically feasible using a plug flow reactor. 2. Prerequisites Aspen Plus V8.0

More information

Survey Calculations Single Surveys

Survey Calculations Single Surveys Survey Calculations Single Surveys Introduction Survey calculations are single point calculations strung together in series. They are also referred to as multiple point calculations. These calculations

More information

Date: Summer Stem Section:

Date: Summer Stem Section: Page 1 of 7 Name: Date: Summer Stem Section: Summer assignment: Build a Molecule Computer Simulation Learning Goals: 1. Students can describe the difference between a molecule name and chemical formula.

More information

Connect the Vernier spectrometer to your lap top computer and power the spectrometer if necessary. Start LoggerPro on your computer.

Connect the Vernier spectrometer to your lap top computer and power the spectrometer if necessary. Start LoggerPro on your computer. Connect the Vernier spectrometer to your lap top computer and power the spectrometer if necessary. Start LoggerPro on your computer. The screen shown in Fig. 1 may be displayed. If status line displays

More information

Working with ArcGIS: Classification

Working with ArcGIS: Classification Working with ArcGIS: Classification 2 Abbreviations D-click R-click TOC Double Click Right Click Table of Content Introduction The benefit from the use of geographic information system (GIS) software is

More information

Tutorial. Getting started. Sample to Insight. March 31, 2016

Tutorial. Getting started. Sample to Insight. March 31, 2016 Getting started March 31, 2016 Sample to Insight CLC bio, a QIAGEN Company Silkeborgvej 2 Prismet 8000 Aarhus C Denmark Telephone: +45 70 22 32 44 www.clcbio.com support-clcbio@qiagen.com Getting started

More information

Introductory WebMO Exercises

Introductory WebMO Exercises Introductory WebMO Exercises These directions assume no prior knowledge of e WebMO interface and provide detailed, click by click instructions on building molecules and setting up calculations. Use your

More information

QuantumWise. QuantumWise is now part of Synopsys

QuantumWise. QuantumWise is now part of Synopsys Table of Contents Table of Contents NiSi2 Si interface Create the NiSi2/Si device The screening region Increase the length of the central region Set-up the calculation for the undoped device Dope the device

More information

Automatic Watershed Delineation using ArcSWAT/Arc GIS

Automatic Watershed Delineation using ArcSWAT/Arc GIS Automatic Watershed Delineation using ArcSWAT/Arc GIS By: - Endager G. and Yalelet.F 1. Watershed Delineation This tool allows the user to delineate sub watersheds based on an automatic procedure using

More information

Electric Fields and Equipotentials

Electric Fields and Equipotentials OBJECTIVE Electric Fields and Equipotentials To study and describe the two-dimensional electric field. To map the location of the equipotential surfaces around charged electrodes. To study the relationship

More information

EOS 102: Dynamic Oceans Exercise 1: Navigating Planet Earth

EOS 102: Dynamic Oceans Exercise 1: Navigating Planet Earth EOS 102: Dynamic Oceans Exercise 1: Navigating Planet Earth YOU MUST READ THROUGH THIS CAREFULLY! This exercise is designed to familiarize yourself with Google Earth and some of its basic functions while

More information

Two problems to be solved. Example Use of SITATION. Here is the main menu. First step. Now. To load the data.

Two problems to be solved. Example Use of SITATION. Here is the main menu. First step. Now. To load the data. Two problems to be solved Example Use of SITATION Mark S. Daskin Department of IE/MS Northwestern U. Evanston, IL 1. Minimize the demand weighted total distance (or average distance) Using 10 facilities

More information

Learning to Use Scigress Wagner, Eugene P. (revised May 15, 2018)

Learning to Use Scigress Wagner, Eugene P. (revised May 15, 2018) Learning to Use Scigress Wagner, Eugene P. (revised May 15, 2018) Abstract Students are introduced to basic features of Scigress by building molecules and performing calculations on them using semi-empirical

More information

Designing a Quilt with GIMP 2011

Designing a Quilt with GIMP 2011 Planning your quilt and want to see what it will look like in the fabric you just got from your LQS? You don t need to purchase a super expensive program. Try this and the best part it s FREE!!! *** Please

More information

Using the Budget Features in Quicken 2008

Using the Budget Features in Quicken 2008 Using the Budget Features in Quicken 2008 Quicken budgets can be used to summarize expected income and expenses for planning purposes. The budget can later be used in comparisons to actual income and expenses

More information

SeeSAR 7.1 Beginners Guide. June 2017

SeeSAR 7.1 Beginners Guide. June 2017 SeeSAR 7.1 Beginners Guide June 2017 Part 1: Basics 1 Type a pdb code and press return or Load your own protein or already existing project, or Just load molecules To begin, let s type 2zff and download

More information

MoLE Gas Laws Activities

MoLE Gas Laws Activities MoLE Gas Laws Activities To begin this assignment you must be able to log on to the Internet using Internet Explorer (Microsoft) 4.5 or higher. If you do not have the current version of the browser, go

More information

Introduction to Computer Tools and Uncertainties

Introduction to Computer Tools and Uncertainties Experiment 1 Introduction to Computer Tools and Uncertainties 1.1 Objectives To become familiar with the computer programs and utilities that will be used throughout the semester. To become familiar with

More information

ChemSep Tutorial: Distillation with Hypothetical Components

ChemSep Tutorial: Distillation with Hypothetical Components ChemSep Tutorial: Distillation with Hypothetical Components Harry Kooijman and Ross Taylor Here we use ChemSep to solve a complex multicomponent distillation problem presented in a paper entitled Multistage

More information

Gas Pressure and Temperature Relationships *

Gas Pressure and Temperature Relationships * Gas Pressure and Temperature Relationships * MoLE Activities To begin this assignment you must be able to log on to the Internet (the software requires OSX for mac users). Type the following address into

More information

Interacting Galaxies

Interacting Galaxies Interacting Galaxies Contents Introduction... 1 Downloads... 1 Selecting Interacting Galaxies to Observe... 2 Measuring the sizes of the Galaxies... 5 Making a Colour Image in IRIS... 8 External Resources...

More information

Downloading GPS Waypoints

Downloading GPS Waypoints Downloading Data with DNR- GPS & Importing to ArcMap and Google Earth Written by Patrick Florance & Carolyn Talmadge, updated on 4/10/17 DOWNLOADING GPS WAYPOINTS... 1 VIEWING YOUR POINTS IN GOOGLE EARTH...

More information

In order to save time, the following data files have already been preloaded to the computer (most likely under c:\odmc2012\data\)

In order to save time, the following data files have already been preloaded to the computer (most likely under c:\odmc2012\data\) ODMC2012 QGIS Ex1 Schools and Public Transport In this exercise, users will learn how to a) map the location of secondary schools in and around the Southampton area; b) overlay the school location map

More information

Buffer Data Capture. Exercise 4:

Buffer Data Capture. Exercise 4: Buffer Data Capture Exercise 4: This example demonstrates some available navigation tools to locate an area of interest and apply some analysis tools to the area. The area of interest is the Baldy Batholith

More information

FireFamilyPlus Version 5.0

FireFamilyPlus Version 5.0 FireFamilyPlus Version 5.0 Working with the new 2016 NFDRS model Objectives During this presentation, we will discuss Changes to FireFamilyPlus Data requirements for NFDRS2016 Quality control for data

More information

ELEC 1908 The Electric Potential (V) March 28, 2013

ELEC 1908 The Electric Potential (V) March 28, 2013 ELEC 1908 The Electric Potential (V) March 28, 2013 1 Abstract The objective of this lab is to solve numerically Laplace s equation in order to obtain the electric potential distribution in di erent electric

More information

OCEAN/ESS 410 Lab 4. Earthquake location

OCEAN/ESS 410 Lab 4. Earthquake location Lab 4. Earthquake location To complete this exercise you will need to (a) Complete the table on page 2. (b) Identify phases on the seismograms on pages 3-6 as requested on page 11. (c) Locate the earthquake

More information

The OptiSage module. Use the OptiSage module for the assessment of Gibbs energy data. Table of contents

The OptiSage module. Use the OptiSage module for the assessment of Gibbs energy data. Table of contents The module Use the module for the assessment of Gibbs energy data. Various types of experimental data can be utilized in order to generate optimized parameters for the Gibbs energies of stoichiometric

More information

1 An Experimental and Computational Investigation of the Dehydration of 2-Butanol

1 An Experimental and Computational Investigation of the Dehydration of 2-Butanol 1 An Experimental and Computational Investigation of the Dehydration of 2-Butanol Summary. 2-Butanol will be dehydrated to a mixture of 1-butene and cis- and trans-2-butene using the method described in

More information

MoLE Gas Laws Activities *

MoLE Gas Laws Activities * MoLE Gas Laws Activities * To begin this assignment you must be able to log on to the Internet using Internet Explorer (Microsoft) 4.5 or higher. If you do not have the current version of the browser,

More information

Ammonia Synthesis with Aspen Plus V8.0

Ammonia Synthesis with Aspen Plus V8.0 Ammonia Synthesis with Aspen Plus V8.0 Part 1 Open Loop Simulation of Ammonia Synthesis 1. Lesson Objectives Become comfortable and familiar with the Aspen Plus graphical user interface Explore Aspen Plus

More information

Chapter 2 Introduction to Aqueous Speciation

Chapter 2 Introduction to Aqueous Speciation Chapter 2 Introduction to Aqueous Speciation Overview It is our belief that the predictive modeling of aqueous systems requires that the system be fully speciated. This allows for smoother extrapolation

More information

McIDAS-V Tutorial Displaying Point Observations from ADDE Datasets updated July 2016 (software version 1.6)

McIDAS-V Tutorial Displaying Point Observations from ADDE Datasets updated July 2016 (software version 1.6) McIDAS-V Tutorial Displaying Point Observations from ADDE Datasets updated July 2016 (software version 1.6) McIDAS-V is a free, open source, visualization and data analysis software package that is the

More information

Dock Ligands from a 2D Molecule Sketch

Dock Ligands from a 2D Molecule Sketch Dock Ligands from a 2D Molecule Sketch March 31, 2016 Sample to Insight CLC bio, a QIAGEN Company Silkeborgvej 2 Prismet 8000 Aarhus C Denmark Telephone: +45 70 22 32 44 www.clcbio.com support-clcbio@qiagen.com

More information

Lewis Structures and Molecular Shapes

Lewis Structures and Molecular Shapes Lewis Structures and Molecular Shapes Rules for Writing Lewis Structures 1. Determine the correct skeleton structure (connectivity of atoms). Usually, the most electronegative atoms go around the edges

More information

Application Note. U. Heat of Formation of Ethyl Alcohol and Dimethyl Ether. Introduction

Application Note. U. Heat of Formation of Ethyl Alcohol and Dimethyl Ether. Introduction Application Note U. Introduction The molecular builder (Molecular Builder) is part of the MEDEA standard suite of building tools. This tutorial provides an overview of the Molecular Builder s basic functionality.

More information

Mnova Software for Analyzing Reaction Monitoring NMR Spectra

Mnova Software for Analyzing Reaction Monitoring NMR Spectra Mnova Software for Analyzing Reaction Monitoring NMR Spectra Version 10 Chen Peng, PhD, VP of Business Development, US & China Mestrelab Research SL San Diego, CA, USA chen.peng@mestrelab.com 858.736.4563

More information

α m ! m or v T v T v T α m mass

α m ! m or v T v T v T α m mass FALLING OBJECTS (WHAT TO TURN IN AND HOW TO DO SO) In the real world, because of air resistance, objects do not fall indefinitely with constant acceleration. One way to see this is by comparing the fall

More information

Studying Topography, Orographic Rainfall, and Ecosystems (STORE)

Studying Topography, Orographic Rainfall, and Ecosystems (STORE) Introduction Studying Topography, Orographic Rainfall, and Ecosystems (STORE) Lesson: Using ArcGIS Explorer to Analyze the Connection between Topography, Tectonics, and Rainfall GIS-intensive Lesson This

More information

1 Introduction to Computational Chemistry (Spartan)

1 Introduction to Computational Chemistry (Spartan) 1 Introduction to Computational Chemistry (Spartan) Start Spartan by clicking Start / Programs / Spartan Then click File / New Exercise 1 Study of H-X-H Bond Angles (Suitable for general chemistry) Structure

More information

Mass Transfer in a Stirred Batch Reactor

Mass Transfer in a Stirred Batch Reactor Mass Transfer in a Stirred Batch Reactor In many processes, efficient reactor usage goes hand in hand with efficient mixing. The ability to accurately examine the effects of impeller placement, speed,

More information

Space Objects. Section. When you finish this section, you should understand the following:

Space Objects. Section. When you finish this section, you should understand the following: GOLDMC02_132283433X 8/24/06 2:21 PM Page 97 Section 2 Space Objects When you finish this section, you should understand the following: How to create a 2D Space Object and label it with a Space Tag. How

More information

M E R C E R W I N WA L K T H R O U G H

M E R C E R W I N WA L K T H R O U G H H E A L T H W E A L T H C A R E E R WA L K T H R O U G H C L I E N T S O L U T I O N S T E A M T A B L E O F C O N T E N T 1. Login to the Tool 2 2. Published reports... 7 3. Select Results Criteria...

More information

WMS 9.0 Tutorial GSSHA Modeling Basics Infiltration Learn how to add infiltration to your GSSHA model

WMS 9.0 Tutorial GSSHA Modeling Basics Infiltration Learn how to add infiltration to your GSSHA model v. 9.0 WMS 9.0 Tutorial GSSHA Modeling Basics Infiltration Learn how to add infiltration to your GSSHA model Objectives This workshop builds on the model developed in the previous workshop and shows you

More information

Senior astrophysics Lab 2: Evolution of a 1 M star

Senior astrophysics Lab 2: Evolution of a 1 M star Senior astrophysics Lab 2: Evolution of a 1 M star Name: Checkpoints due: Friday 13 April 2018 1 Introduction This is the rst of two computer labs using existing software to investigate the internal structure

More information

Dimerization in a Tubular Reactor

Dimerization in a Tubular Reactor Dimerization in a Tubular Reactor Tubular reactors are very common in large-scale continuous, for example in the petroleum industry. One key design and optimization parameter is the conversion, that is

More information

Introduction to MoLEs Activities Computer Simulations *

Introduction to MoLEs Activities Computer Simulations * Introduction to MoLEs Activities Computer Simulations * Molecular Level Experiments (MoLEs) are chemistry laboratory experiments based on computer simulations. There are two types of simulation programs

More information

Comparing whole genomes

Comparing whole genomes BioNumerics Tutorial: Comparing whole genomes 1 Aim The Chromosome Comparison window in BioNumerics has been designed for large-scale comparison of sequences of unlimited length. In this tutorial you will

More information

A First Course on Kinetics and Reaction Engineering Example 14.3

A First Course on Kinetics and Reaction Engineering Example 14.3 Example 14.3 Problem Purpose This problem illustrates differential analysis using data from a differentially operated PFR. Problem Statement The isomerization of cyclopropane, equation (1), was known from

More information

Kinetics of Crystal Violet Bleaching

Kinetics of Crystal Violet Bleaching Kinetics of Crystal Violet Bleaching Authors: V. C. Dew and J. M. McCormick* From Update March 12, 2013 with revisions Nov. 29, 2016 Introduction Chemists are always interested in whether a chemical reaction

More information

Exercise 6: Using Burn Severity Data to Model Erosion Risk

Exercise 6: Using Burn Severity Data to Model Erosion Risk Exercise 6: Using Burn Severity Data to Model Erosion Risk Document Updated: November 2009 Software Versions: ERDAS Imagine 9.3 and ArcGIS 9.3, Microsoft Office 2007 Introduction A common use of burn severity

More information

13. Equilibrium Module - Description of Menus and Options

13. Equilibrium Module - Description of Menus and Options 15008-ORC-J 1 (57) 13. Equilibrium Module - Description of Menus and Options 15008-ORC-J 2 (57) SUMMARY HSC Equilibrium module enables user to calculate multi-component equilibrium compositions in heterogeneous

More information

Gravity: How fast do objects fall? Teacher Advanced Version (Grade Level: 8 12)

Gravity: How fast do objects fall? Teacher Advanced Version (Grade Level: 8 12) Gravity: How fast do objects fall? Teacher Advanced Version (Grade Level: 8 12) *** Experiment with Audacity and Excel to be sure you know how to do what s needed for the lab*** Kinematics is the study

More information

Catchment Delineation Workflow

Catchment Delineation Workflow Catchment Delineation Workflow Slide 1 Given is a GPS point (Lat./Long.) for an outlet location. The outlet could be a proposed Dam site, a storm water drainage culvert on a rural highway, or any other

More information

OECD QSAR Toolbox v.4.1. Step-by-step example for building QSAR model

OECD QSAR Toolbox v.4.1. Step-by-step example for building QSAR model OECD QSAR Toolbox v.4.1 Step-by-step example for building QSAR model Background Objectives The exercise Workflow of the exercise Outlook 2 Background This is a step-by-step presentation designed to take

More information

MASSACHUSETTS INSTITUTE OF TECHNOLOGY Physics Department. Experiment 03: Work and Energy

MASSACHUSETTS INSTITUTE OF TECHNOLOGY Physics Department. Experiment 03: Work and Energy MASSACHUSETTS INSTITUTE OF TECHNOLOGY Physics Department Physics 8.01 Fall Term 2010 Experiment 03: Work and Energy Purpose of the Experiment: In this experiment you allow a cart to roll down an inclined

More information

Computer simulation of radioactive decay

Computer simulation of radioactive decay Computer simulation of radioactive decay y now you should have worked your way through the introduction to Maple, as well as the introduction to data analysis using Excel Now we will explore radioactive

More information

Using Tables and Graphing Calculators in Math 11

Using Tables and Graphing Calculators in Math 11 Using Tables and Graphing Calculators in Math 11 Graphing calculators are not required for Math 11, but they are likely to be helpful, primarily because they allow you to avoid the use of tables in some

More information

LAB 3 INSTRUCTIONS SIMPLE LINEAR REGRESSION

LAB 3 INSTRUCTIONS SIMPLE LINEAR REGRESSION LAB 3 INSTRUCTIONS SIMPLE LINEAR REGRESSION In this lab you will first learn how to display the relationship between two quantitative variables with a scatterplot and also how to measure the strength of

More information

Chem 253. Tutorial for Materials Studio

Chem 253. Tutorial for Materials Studio Chem 253 Tutorial for Materials Studio This tutorial is designed to introduce Materials Studio 7.0, which is a program used for modeling and simulating materials for predicting and rationalizing structure

More information

Methane Oxidation Reactions

Methane Oxidation Reactions Methane Oxidation Reactions CH 4 + 2 O -> CO 2 2 + 2 H 2 O Total Oxidation (Combustion) CH 4 + 0.5 O -> CO 2 + 2 H 2 CO + 0.5 O -> CO 2 2 H 2 + 0.5 O -> H 2 2 O CH 4 + H 2 O->CO + 3 H 2 Partial Oxidation

More information

CREATING A REPORT ON FIRE (April 2011)

CREATING A REPORT ON FIRE (April 2011) CREATING A REPORT ON FIRE (April 2011) The Fire Report feature on the NAFI website lets you create simple summaries of fire activity for areas of land in far northern Australia (north of 20 degrees where

More information

An area chart emphasizes the trend of each value over time. An area chart also shows the relationship of parts to a whole.

An area chart emphasizes the trend of each value over time. An area chart also shows the relationship of parts to a whole. Excel 2003 Creating a Chart Introduction Page 1 By the end of this lesson, learners should be able to: Identify the parts of a chart Identify different types of charts Create an Embedded Chart Create a

More information

Virtual Beach Building a GBM Model

Virtual Beach Building a GBM Model Virtual Beach 3.0.6 Building a GBM Model Building, Evaluating and Validating Anytime Nowcast Models In this module you will learn how to: A. Build and evaluate an anytime GBM model B. Optimize a GBM model

More information

Investigation #2 TEMPERATURE VS. HEAT. Part I

Investigation #2 TEMPERATURE VS. HEAT. Part I Name: Investigation #2 Partner(s): TEMPERATURE VS. HEAT These investigations are designed to help you distinguish between two commonly confused concepts in introductory physics. These two concepts, temperature

More information

The CSC Interface to Sky in Google Earth

The CSC Interface to Sky in Google Earth The CSC Interface to Sky in Google Earth CSC Threads The CSC Interface to Sky in Google Earth 1 Table of Contents The CSC Interface to Sky in Google Earth - CSC Introduction How to access CSC data with

More information

Gravity: How fast do objects fall? Student Advanced Version

Gravity: How fast do objects fall? Student Advanced Version Gravity: How fast do objects fall? Student Advanced Version Kinematics is the study of how things move their position, velocity, and acceleration. Acceleration is always due to some force acting on an

More information

Lesson Plan 2 - Middle and High School Land Use and Land Cover Introduction. Understanding Land Use and Land Cover using Google Earth

Lesson Plan 2 - Middle and High School Land Use and Land Cover Introduction. Understanding Land Use and Land Cover using Google Earth Understanding Land Use and Land Cover using Google Earth Image an image is a representation of reality. It can be a sketch, a painting, a photograph, or some other graphic representation such as satellite

More information

Computational Study of Chemical Kinetics (GIDES)

Computational Study of Chemical Kinetics (GIDES) Computational Study of Chemical Kinetics (GIDES) Software Introduction Berkeley Madonna (http://www.berkeleymadonna.com) is a dynamic modeling program in which relational diagrams are created using a graphical

More information

I. Introduction. II. An Introduction to Starry Night NAME: ORBITAL MOTION

I. Introduction. II. An Introduction to Starry Night NAME: ORBITAL MOTION NAME: ORBITAL MOTION What will you learn in this Lab? You will be using some special software to simulate the motion of planets in our Solar System and across the night sky. You will be asked to try and

More information

Astronomy 101 Lab: Stellarium Tutorial

Astronomy 101 Lab: Stellarium Tutorial Name: Astronomy 101 Lab: Stellarium Tutorial Please install the Stellarium software on your computer using the instructions in the procedure. If you own a laptop, please bring it to class. You will submit

More information

The data for this lab comes from McDonald Forest. We will be working with spatial data representing the forest boundary, streams, roads, and stands.

The data for this lab comes from McDonald Forest. We will be working with spatial data representing the forest boundary, streams, roads, and stands. GIS LAB 6 Using the Projection Utility. Converting Data to Oregon s Approved Lambert Projection. Determining Stand Size, Stand Types, Road Length, and Stream Length. This lab will ask you to work with

More information

Lab 1: Dynamic Simulation Using Simulink and Matlab

Lab 1: Dynamic Simulation Using Simulink and Matlab Lab 1: Dynamic Simulation Using Simulink and Matlab Objectives In this lab you will learn how to use a program called Simulink to simulate dynamic systems. Simulink runs under Matlab and uses block diagrams

More information

Create Satellite Image, Draw Maps

Create Satellite Image, Draw Maps Create Satellite Image, Draw Maps 1. The goal Using Google Earth, we want to create and import a background file into our Adviser program. From there, we will be creating paddock boundaries. The accuracy

More information

Child Opportunity Index Mapping

Child Opportunity Index Mapping Child Opportunity Index Mapping A partnership project of How to Use and Interpret the Child Opportunity Index Maps How to Use the Child Opportunity Index Maps Getting Started: How to Find and Open a Child

More information

EXERCISE 12: IMPORTING LIDAR DATA INTO ARCGIS AND USING SPATIAL ANALYST TO MODEL FOREST STRUCTURE

EXERCISE 12: IMPORTING LIDAR DATA INTO ARCGIS AND USING SPATIAL ANALYST TO MODEL FOREST STRUCTURE EXERCISE 12: IMPORTING LIDAR DATA INTO ARCGIS AND USING SPATIAL ANALYST TO MODEL FOREST STRUCTURE Document Updated: December, 2007 Introduction This exercise is designed to provide you with possible silvicultural

More information

Procedure Beckman Coulter ProteomeLabTM PA 800

Procedure Beckman Coulter ProteomeLabTM PA 800 Procedure Beckman Coulter ProteomeLabTM PA 800 Steps for sample testing using the SDS MW Method Prepared By: Rafael Hernandez, Jan 2013 Procedure: Logging in Turning on instrument PA800 Refer to Preconditioning

More information

Figure 2.1 The Inclined Plane

Figure 2.1 The Inclined Plane PHYS-101 LAB-02 One and Two Dimensional Motion 1. Objectives The objectives of this experiment are: to measure the acceleration due to gravity using one-dimensional motion, i.e. the motion of an object

More information