Supplemental Data. Yang et al. (2012). Plant Cell /tpc

Size: px
Start display at page:

Download "Supplemental Data. Yang et al. (2012). Plant Cell /tpc"

Transcription

1 Supplemental Figure 1. Mature flowers of P. heterotricha. (A) An inflorescence of P. heterotricha showing the front view of a zygomorphic flower characterized by two small dorsal petals and only two fertile ventral stamens. (B) The dissected flower showing the abortion of dorsal and lateral stamens (one dorsal stamen stops growth so early that it forms an almost invisible vestige). Dp/lp/vp represent dorsal/lateral/ventral petals, and lst/vst represent lateral/ ventral stamens. Bars = 1 cm. 1

2 Supplemental Figure 2. Overexpression of P. heterotricha CYC1C represses the vegetative growth of Arabidopsis T2 plants. (A) 7-day-old of T2 transgenic seedlings (right) have smaller cotyledons and poorly developed roots compared with wild-type plants (left). (B) 14-day-old of T2 transgenic plants (right) showing retarded growth compared with wild-type plants (left). (C) CYC1C overexpression continues to inhibit Arabidopsis growth. The plants were photographed 21 days after germination. (D) The much smaller leaves of T2 transgenic plants (right) than those of wild-type plants (left). (E) Strong expression of CYC1C in leaves of T2 transgenic plants (tg) but no expression in those of wild-type plants (wt). Bars = 5 cm. 2

3 Supplemental Figure 3. P. heterotricha CYC1C constitutive expression delays the flowering time of Arabidopsis T2 plants. (A) One wild-type plant photographed 35 days after germination. (B) One typical T2 transgenic plant photographed 55 days after germination. (C) The flowering time of wild-type (wt) and T2 transgenic (tg) plants determined by counting rosette leaf numbers and recording days of flowering after germination. At least three wild-type plants were measured (the data shown are their mean values). Bars = 1 cm. 3

4 Supplemental Figure 4. P. heterotricha CYC1C overexpression enhances the outgrowth of lateral branches in Arabidopsis T2 plants. The left is a wild-type plant, and the right is one representative T2 transgenic plant. Bar = 5 cm. 4

5 Supplemental Figure 5. Arabidopsis plants overexpressing P. heterotricha CYC1C produce smaller flowers than wide-type Arabidopsis. (A) Flowers of wide-type (left) and T2 transgenic (right) plants. (B) Petals of wide-type (bottom) and T2 transgenic (up) plants. (C) Stamens and carpels of wide-type (left) and T2 transgenic (right) plants. Bars = 2 mm. 5

6 Supplemental Figure 6. P. heterotricha CYC1C overexpression reduces Arabidopsis petal areas mainly by reducing petal cell sizes. The petal cells of Arabidopsis T2 plants (right) are obviously smaller than those of wide-type plants (left). Bars = µm on the SEM images, and 1 mm on the whole petals. The same numbers of petal cells are highlighted in yellow. 6

7 Supplemental Figure 7. The P. heterotricha CYC1C and CYC1D promoters contain sequences matching the consensus CYC-binding sites. (A) The promoter sequence of CYC1C showing the putative CYC-binding site (cbs1, boxed). (B) The promoter sequence of CYC1D showing the putative CYC-binding site (cbs2, boxed). 7

8 CYC1C MFGKSSYLHPPQVSQSLQSRGSTSAIDIVNGDEILLHDHQQQQDMLSSHYLATN-APFIETSTLYN------QDVGG-SNEDP-SALAST 81 CYC1D MLSKSSYLHPRQVSQSLESRGSTSAVDLVNGAEILLHDHHHHQDMLSDHYLAEN-VSFLEVSTLYN------QDVGG-SNEDP-SALANT 81 CYC2A CYC1C MFGKSPYLQLPHVSSSLQSRASTSVVDLN-DAEFLLHQHHH--DILSGQLVATN-APFLEASTLYN------QDVLGGINEDPNATMANT MFGKSSYLHPPQVSQSLQSRGSTSAIDIVNGDEILLHDHQQQQDMLSSHYLATN-APFIETSTLYN------QDVGG-SNEDP-SALAST CYC2B CYC1D MFSKSTYLQLPQVSTSLQSHASTSVVDLN-GAEFLLHQHHH--DILAGHFVGTN-APFLEASTLYN------QDVIGEVNEDPNFTMANT MLSKSSYLHPRQVSQSLESRGSTSAVDLVNGAEILLHDHHHHQDMLSDHYLAEN-VSFLEVSTLYN------QDVGG-SNEDP-SALANT CYC2A CYC1C MFGKNTYLHLPQVSSSLHSRAATSVVDLN-GNEIQLH------DMLSGHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDP----SPT MFGKSPYLQLPHVSSSLQSRASTSVVDLN-DAEFLLHQHHH--DILSGQLVATN-APFLEASTLYN------QDVLGGINEDPNATMANT MFGKSSYLHPPQVSQSLQSRGSTSAIDIVNGDEILLHDHQQQQDMLSSHYLATN-APFIETSTLYN------QDVGG-SNEDP-SALAST CYC2B CYC1D MFSKSTYLQLPQVSTSLQSHASTSVVDLN-GAEFLLHQHHH--DILAGHFVGTN-APFLEASTLYN------QDVIGEVNEDPNFTMANT MLSKSSYLHPRQVSQSLESRGSTSAVDLVNGAEILLHDHHHHQDMLSDHYLAEN-VSFLEVSTLYN------QDVGG-SNEDP-SALANT CYC1C CYC2A CYC1C FSIKQMVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLAHTKKS----SSARSTPLPSECEV MFGKNTYLHLPQVSSSLHSRAATSVVDLN-GNEIQLH------DMLSGHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDP----SPT MFGKSPYLQLPHVSSSLQSRASTSVVDLN-DAEFLLHQHHH--DILSGQLVATN-APFLEASTLYN------QDVLGGINEDPNATMANT MFGKSSYLHPPQVSQSLQSRGSTSAIDIVNGDEILLHDHQQQQDMLSSHYLATN-APFIETSTLYN------QDVGG-SNEDP-SALAST CYC1D CYC2B CYC1D FSRNQTVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLVHTKKS----SSARSTSSPSECEV MFSKSTYLQLPQVSTSLQSHASTSVVDLN-GAEFLLHQHHH--DILAGHFVGTN-APFLEASTLYN------QDVIGEVNEDPNFTMANT MLSKSSYLHPRQVSQSLESRGSTSAVDLVNGAEILLHDHHHHQDMLSDHYLAEN-VSFLEVSTLYN------QDVGG-SNEDP-SALANT BASIC HELIX I LOOP HELIX II CYC2A CYC1C CYC2A FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLGFDKPSKTLEWLLTKSKAAIKDLVQMKKSDATTCTNKSISSPSECEI FSIKQMVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLAHTKKS----SSARSTPLPSECEV MFGKNTYLHLPQVSSSLHSRAATSVVDLN-GNEIQLH------DMLSGHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDP----SPT MFGKSPYLQLPHVSSSLQSRASTSVVDLN-DAEFLLHQHHH--DILSGQLVATN-APFLEASTLYN------QDVLGGINEDPNATMANT CYC2B CYC1D CYC2B FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLAFDKPSKTLEWLLTKSKAAIKELVQLKKSDASTCTNKSISSPSECEV FSRNQTVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLVHTKKS----SSARSTSSPSECEV MFSKSTYLQLPQVSTSLQSHASTSVVDLN-GAEFLLHQHHH--DILAGHFVGTN-APFLEASTLYN------QDVIGEVNEDPNFTMANT Am CYC2A CYC1C FPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKST-----KSNSSSPCDDCEE FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLGFDKPSKTLEWLLTKSKAAIKDLVQMKKSDATTCTNKSISSPSECEI FSIKQMVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLAHTKKS----SSARSTPLPSECEV MFGKNTYLHLPQVSSSLHSRAATSVVDLN-GNEIQLH------DMLSGHYLTTANAPVLESTALFNNNNNFNHDVVNGLNRDP----SPT CYC2B CYC1D FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLAFDKPSKTLEWLLTKSKAAIKELVQLKKSDASTCTNKSISSPSECEV FSRNQTVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLVHTKKS----SSARSTSSPSECEV CYC1C CYC2A CYC1C VLNGEAFEHGSCLLPADSKRKSVLMNANQCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNM NNL FPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKST-----KSNSSSPCDDCEE FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLGFDKPSKTLEWLLTKSKAAIKDLVQMKKSDATTCTNKSISSPSECEI FSIKQMVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLAHTKKS----SSARSTPLPSECEV CYC1D CYC2B CYC1D VLNGEAFENGNCLLGEDSKRKWVSINANKCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNMGSNLNPSVPIQR-NNL FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLAFDKPSKTLEWLLTKSKAAIKELVQLKKSDASTCTNKSISSPSECEV FSRNQTVKKDRHSKIVTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLVHTKKS----SSARSTSSPSECEV CYC2A CYC1C CYC2A IE----LENGN-YLDADSNGNFVLANTYRCIRAKDPQQDVLNLAKESRAKARARARERTREKMCMKKFTESRNMVPDLNPSIPIQARNSF VLNGEAFEHGSCLLPADSKRKSVLMNANQCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNM NNL FPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKST-----KSNSSSPCDDCEE FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLGFDKPSKTLEWLLTKSKAAIKDLVQMKKSDATTCTNKSISSPSECEI TCP domain CYC2B CYC1D CYC2B IE----LENGN-YLDADYNGNLVPANTYRCRRAKDTQQDILNLAKESRAKARARARERTREKLCMKKFTESSNMASDLNRSIPIQARNSL VLNGEAFENGNCLLGEDSKRKWVSINANKCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNMGSNLNPSVPIQR-NNL FQAKQTVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLAFDKPSKTLEWLLTKSKAAIKELVQLKKSDASTCTNKSISSPSECEV Am CYC2A CYC1C VVS---VDSEN--VTDHSKGKSLKAN-NKCKEAMDSHQAA---AKESRAKARARARERTKEKMCIKQLNEAIVLR NHQ IE----LENGN-YLDADSNGNFVLANTYRCIRAKDPQQDVLNLAKESRAKARARARERTREKMCMKKFTESRNMVPDLNPSIPIQARNSF VLNGEAFEHGSCLLPADSKRKSVLMNANQCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNM NNL FPTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKST-----KSNSSSPCDDCEE CYC2B CYC1D IE----LENGN-YLDADYNGNLVPANTYRCRRAKDTQQDILNLAKESRAKARARARERTREKLCMKKFTESSNMASDLNRSIPIQARNSL VLNGEAFENGNCLLGEDSKRKWVSINANKCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNMGSNLNPSVPIQR-NNL CYC1C CYC2A CYC1C FEVCRPSASNSQLILHCPITDEATAATVTAT-DHIIQESNVVKRMLRHHPSFFGFHCSLPSPNINENWDVSSLTSQSN-FCDILDQQHKF VVS---VDSEN--VTDHSKGKSLKAN-NKCKEAMDSHQAA---AKESRAKARARARERTKEKMCIKQLNEAIVLR NHQ IE----LENGN-YLDADSNGNFVLANTYRCIRAKDPQQDVLNLAKESRAKARARARERTREKMCMKKFTESRNMVPDLNPSIPIQARNSF VLNGEAFEHGSCLLPADSKRKSVLMNANQCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNM NNL CYC1D CYC2B CYC1D FEVCRPSASN----IHCPITNEATTATVAATPEDLIQESNVIKRMLRHHSSFFGFHCSLPSPNVNENWDVSSLTSQSN-FCDILD-QHKF IE----LENGN-YLDADYNGNLVPANTYRCRRAKDTQQDILNLAKESRAKARARARERTREKLCMKKFTESSNMASDLNRSIPIQARNSL VLNGEAFENGNCLLGEDSKRKWVSINANKCKGAKDPTQSASTLAKESRAKARARARERTKEKMCIKKLNESRNMGSNLNPSVPIQR-NNL CYC2A CYC1C CYC2A SEVCKLPPSNTEPSLHFPLANTAAAT------EDLIQESLVIRRMLKNN-SIFGFQQ-----NVNQNWDISSLTAQSN-LCDILD-QHKF FEVCRPSASNSQLILHCPITDEATAATVTAT-DHIIQESNVVKRMLRHHPSFFGFHCSLPSPNINENWDVSSLTSQSN-FCDILDQQHKF VVS---VDSEN--VTDHSKGKSLKAN-NKCKEAMDSHQAA---AKESRAKARARARERTKEKMCIKQLNEAIVLR NHQ IE----LENGN-YLDADSNGNFVLANTYRCIRAKDPQQDVLNLAKESRAKARARARERTREKMCMKKFTESRNMVPDLNPSIPIQARNSF CYC2B CYC1D CYC2B SEVCEVPPSNTEPSFHFPLANTAAAT------EELIQESLVIRRILKHN-SMLGFQQ-----NVNQNCDISSLTAQSN-LCDILD-QHRF FEVCRPSASN----IHCPITNEATTATVAATPEDLIQESNVIKRMLRHHSSFFGFHCSLPSPNVNENWDVSSLTSQSN-FCDILD-QHKF IE----LENGN-YLDADYNGNLVPANTYRCRRAKDTQQDILNLAKESRAKARARARERTREKLCMKKFTESSNMASDLNRSIPIQARNSL Am CYC2A CYC1C FEVSGTREAFVHPVFGFHQQNYGNAS HENWDQSNLSSQSNQLCAILN-QHKF SEVCKLPPSNTEPSLHFPLANTAAAT------EDLIQESLVIRRMLKNN-SIFGFQQ-----NVNQNWDISSLTAQSN-LCDILD-QHKF FEVCRPSASNSQLILHCPITDEATAATVTAT-DHIIQESNVVKRMLRHHPSFFGFHCSLPSPNINENWDVSSLTSQSN-FCDILDQQHKF VVS---VDSEN--VTDHSKGKSLKAN-NKCKEAMDSHQAA---AKESRAKARARARERTKEKMCIKQLNEAIVLR NHQ R domain CYC2B CYC1D SEVCEVPPSNTEPSFHFPLANTAAAT------EELIQESLVIRRILKHN-SMLGFQQ-----NVNQNCDISSLTAQSN-LCDILD-QHRF FEVCRPSASN----IHCPITNEATTATVAATPEDLIQESNVIKRMLRHHSSFFGFHCSLPSPNVNENWDVSSLTSQSN-FCDILD-QHKF CYC1C CYC2A CYC1C INR---- FEVSGTREAFVHPVFGFHQQNYGNAS HENWDQSNLSSQSNQLCAILN-QHKF SEVCKLPPSNTEPSLHFPLANTAAAT------EDLIQESLVIRRMLKNN-SIFGFQQ-----NVNQNWDISSLTAQSN-LCDILD-QHKF FEVCRPSASNSQLILHCPITDEATAATVTAT-DHIIQESNVVKRMLRHHPSFFGFHCSLPSPNINENWDVSSLTSQSN-FCDILDQQHKF CYC1D CYC2B CYC1D INR---- SEVCEVPPSNTEPSFHFPLANTAAAT------EELIQESLVIRRILKHN-SMLGFQQ-----NVNQNCDISSLTAQSN-LCDILD-QHRF FEVCRPSASN----IHCPITNEATTATVAATPEDLIQESNVIKRMLRHHSSFFGFHCSLPSPNVNENWDVSSLTSQSN-FCDILD-QHKF CYC2A CYC1C CYC2A INSSSNM INR---- FEVSGTREAFVHPVFGFHQQNYGNAS HENWDQSNLSSQSNQLCAILN-QHKF SEVCKLPPSNTEPSLHFPLANTAAAT------EDLIQESLVIRRMLKNN-SIFGFQQ-----NVNQNWDISSLTAQSN-LCDILD-QHKF CYC2B CYC1D CYC2B INSSSNM INR---- SEVCEVPPSNTEPSFHFPLANTAAAT------EELIQESLVIRRILKHN-SMLGFQQ-----NVNQNCDISSLTAQSN-LCDILD-QHRF Am CYC2A CYC1C IN----- INSSSNM INR---- FEVSGTREAFVHPVFGFHQQNYGNAS HENWDQSNLSSQSNQLCAILN-QHKF CYC2B CYC1D INSSSNM INR CYC2A CYC1C IN----- INSSSNM INR CYC2B CYC1D INSSSNM INR CYC2A IN----- INSSSNM CYC2B INSSSNM 338 Am CYC IN Supplemental Figure 8. Alignment of protein sequences of P. heterotricha CYC and Antirrhinum CYC. TCP (comprising BASIC, HELIX I, LOOP, and HELIX II regions) and R domains are underlined. The TCP domain of CYC1C is identical to that of CYC1D. 8

9 98 At TCP4 CIN At TCP2 CYC1 82 At TCP18 Lj CYC1 Floral CYC-binding symmetry site TCP-C Glyma08g28690 Glyma13g07480 Yes Glyma19g05910 Lj CYC2 ECE Mt CYC1A Lj CYC3 Glyma10g39140 Vvi Loc Yes Yes No Am CYC Am DICH 82 CYC1C CYC1D Yes CYC2 90 Mg CYC Sl TCP7 Yes No 63 CYC3 At TCP1 Br TCP1 At TCP12 No No Os PCF1 TCP-P Os PCF2 Supplemental Figure 9. The neighbor-joining tree of CYC2 clade genes using MEGA 4. Distance calculations are based on the protein sequences exclusive of the regions between TCP and R domains. Sequences were subjected to the neighbor-joining analysis. All fragments analyzed (bold) cluster within the CYC2 clade with a high bootstrap. Bootstrap values higher than 50% are shown. Am, Antirrhinum majus; At, Arabidopsis thaliana; Br, Brassica rapa; Glyma, Glycine max; Lj, Lotus japonicus; Mg, Mimulus guttatus; Mt, Medicago truncatula;, Primulina heterotricha; Sl, Solanum lycopersicum; Vvi, Vitis vinifera. Accession numbers for these sequences are: Am CYC: Y16313; Am DICH: AF199465; At TCP1: NM_ ; At TCP2: NM_ ; At TCP4: NM_ ; At TCP12: NM_105554; At TCP16: NM_114384; At TCP18: NM_112741; Br TCP1: AC189200; Vvi LOC256607: XM_ ; Mg CYC: AC182570; Mt CYC1A: XM_ ; Sl TCP7: NM_ ; Lj CYC1: DQ202475; Lj CYC2: DQ202476; Lj CYC3: DQ202477; PCF1: DE7260; PCF2: D87261; CYC1C: JX020500; CYC1D: JX020501; CYC2A: JX020502; CYC2B: JX

10 Supplemental Table 1. Putative TCP-binding sites found in other ECE genes in the monocots. Species Gene a Sequence b Reference Oryza REP1 (EU702407) tctgggcccctctccg (-2991) Yuan et al., 2009 sativa agtagtgggcccttag (-1490) TB1 (AB088343) gggtggcccacggtt (-2215) Navaud et al., 2007 tttagtcccacatcg (-1919) tttagtcccacattg (-1837) tttagtcccacatcg (-1710) tttagtcccacatcg (-1584) ggttggcccacggtt (-1429) ccaaggccccacgtcg (-941) Zea TB1 (AF415151) ggaggaggcccaggt (-2947) Doebley et al., 1997 mays aacagggcccactacc (-1635) tacaggtcccatatg (-834) a The number in the bracket represent the accession number of each gene. b The sequences with capital letters representing the consensus CYC-binding sites. 3 kb upstream region of respective gene is analysed in this study. The number in the bracket represents the position of each site relative to the start codon of respective gene. 10

11 Supplemental Table 2. Primers used in this study. Primer name Sequence (from 5 to 3 ) CYC1C-F1 CYC1C-R1 CYC1D-F1 CYC1D-R1 CYC1C-F2 CYC1C-R2 CYC1D-F2 CYC1D-R2 CYC1C-F2 CYC1C-R2 CYC1D-F2 CYC1D-R2 CYC1C-F3 CYC1C-R3 CYC1C-F4 CYC1C-R4 CYC1D-F3 CYC1D-R3 CYC1C-F5 CYC1C-R5 CYC1C-F6 CYC1C-R6 ACTIN-F ACTIN-R AtEF1α-F AtEF1α-R CGCCGTTTATTGAGACTTCAACC CTAGAACTCTTCTTTGTATGAG TGTCATTTCTTGAGGTTTCAACA CTGGAACTTTTCTTTGTATGAA CAGACCATCGGCATCTAATAGCCAG CGAAAAACGAAGGATGGTGCCTCAG TGCTGTAGACCTCGTTAATGGAGC CTCAAGAAATGACACATTTTCTGC CTCGGATCCATGTTTGGCAAGAG CTTGAATTCTCACATTTTCTCCTTC CTGGATCCCTGGCCAACACAT CAAAAGCTTCGCCATTTAACAC TAACCCATGGCAACAATGTTTGGCAAGAGCTC CACTAGTCGCAGCAGCAGCAGCAGCAGCAGCAGCTATGTTTGAAGAT CATGAGTTGTTCACTGGCATACC GCTGAGATTAGAGCAGATTAAAGACCC GGTGAGTCGTTCACTGTCATACCAG GCTGTGATTAGAGCAGATT TAAGGG TGTCGTTAAAAGGATGCTGAGGCACC CTTGTGCTGCTGATCCAAAATGTCAC AGACCATGGTTGGCAAGAGCTCATAC AGAACTAGTGATGAACTTGTGCTGCTG TGTGTTGGACTCTGGTGATG TCCTCCAATCCAGACACTG TGAGCACGCTCTTCTTGCTTTCA GGTGGTGGCATCCATCTTGTTACA 11

12 Supplemental References: Doebley J, Stec A, Hubbard L. (1997) The evolution of apical dominance in maize. Nature. 386: Navaud O, Dabos P, Carnus E, Tremousaygue D, HervéC. (2007) TCP transcription factors predate the emergence of land plants. J. Mol. Evol. 65: Yuan Z, Gao S, Xue D-W, Luo D, Li L-T, Ding S-Y, Yao X, Wilson ZA, Qian Q, Zhang D-B. (2009) RETARDED PALEA1 controls palea development and floral zygomorphy in rice. Plant ysiol. 149:

Supplementary Figure S1. Amino acid alignment of selected monocot FT-like and TFL-like sequences. Sequences were aligned using ClustalW and analyzed

Supplementary Figure S1. Amino acid alignment of selected monocot FT-like and TFL-like sequences. Sequences were aligned using ClustalW and analyzed Supplementary Figure S1. Amino acid alignment of selected monocot FT-like and TFL-like sequences. Sequences were aligned using ClustalW and analyzed using the Geneious software. Accession numbers of the

More information

The Plant Cell, November. 2017, American Society of Plant Biologists. All rights reserved

The Plant Cell, November. 2017, American Society of Plant Biologists. All rights reserved The Genetics of Floral Development Teaching Guide Overview The development of flowers in angiosperm plants provided a critical evolutionary advantage, allowing more options for pollen dispersal and seed

More information

Supplemental Table 1. Primers used for cloning and PCR amplification in this study

Supplemental Table 1. Primers used for cloning and PCR amplification in this study Supplemental Table 1. Primers used for cloning and PCR amplification in this study Target Gene Primer sequence NATA1 (At2g393) forward GGG GAC AAG TTT GTA CAA AAA AGC AGG CTT CAT GGC GCC TCC AAC CGC AGC

More information

Genome-wide Identification of Lineage Specific Genes in Arabidopsis, Oryza and Populus

Genome-wide Identification of Lineage Specific Genes in Arabidopsis, Oryza and Populus Genome-wide Identification of Lineage Specific Genes in Arabidopsis, Oryza and Populus Xiaohan Yang Sara Jawdy Timothy Tschaplinski Gerald Tuskan Environmental Sciences Division Oak Ridge National Laboratory

More information

Supplemental Figure 1. Comparison of Tiller Bud Formation between the Wild Type and d27. (A) and (B) Longitudinal sections of shoot apex in wild-type

Supplemental Figure 1. Comparison of Tiller Bud Formation between the Wild Type and d27. (A) and (B) Longitudinal sections of shoot apex in wild-type A B 2 3 3 2 1 1 Supplemental Figure 1. Comparison of Tiller Bud Formation between the Wild Type and d27. (A) and (B) Longitudinal sections of shoot apex in wild-type (A) and d27 (B) seedlings at the four

More information

Nature Genetics: doi: /ng Supplementary Figure 1. The phenotypes of PI , BR121, and Harosoy under short-day conditions.

Nature Genetics: doi: /ng Supplementary Figure 1. The phenotypes of PI , BR121, and Harosoy under short-day conditions. Supplementary Figure 1 The phenotypes of PI 159925, BR121, and Harosoy under short-day conditions. (a) Plant height. (b) Number of branches. (c) Average internode length. (d) Number of nodes. (e) Pods

More information

Supplemental Data. Wang et al. (2014). Plant Cell /tpc

Supplemental Data. Wang et al. (2014). Plant Cell /tpc Supplemental Figure1: Mock and NPA-treated tomato plants. (A) NPA treated tomato (cv. Moneymaker) developed a pin-like inflorescence (arrowhead). (B) Comparison of first and second leaves from mock and

More information

Supplemental Data. Perea-Resa et al. Plant Cell. (2012) /tpc

Supplemental Data. Perea-Resa et al. Plant Cell. (2012) /tpc Supplemental Data. Perea-Resa et al. Plant Cell. (22)..5/tpc.2.3697 Sm Sm2 Supplemental Figure. Sequence alignment of Arabidopsis LSM proteins. Alignment of the eleven Arabidopsis LSM proteins. Sm and

More information

Supplementary Figure 3

Supplementary Figure 3 Supplementary Figure 3 7.0 Col Kas-1 Line FTH1A 8.4 F3PII3 8.9 F26H11 ATQ1 T9I22 PLS8 F26B6-B 9.6 F27L4 9.81 F27D4 9.92 9.96 10.12 10.14 10.2 11.1 0.5 Mb T1D16 Col % RGR 83.3 101 227 93.5 75.9 132 90 375

More information

TCP genes: a family snapshot ten years later

TCP genes: a family snapshot ten years later Review TCP genes: a family snapshot ten years later Mar Martín-Trillo 1 and Pilar Cubas 2 1 Facultad de Ciencias del Medio Ambiente, Campus Tecnológico de la Fábrica de Armas, Avda. Carlos III, s/n E-45071,

More information

Supplemental Data. Hou et al. (2016). Plant Cell /tpc

Supplemental Data. Hou et al. (2016). Plant Cell /tpc Supplemental Data. Hou et al. (216). Plant Cell 1.115/tpc.16.295 A Distance to 1 st nt of start codon Distance to 1 st nt of stop codon B Normalized PARE abundance 8 14 nt 17 nt Frame1 Arabidopsis inflorescence

More information

Supplemental Data. Perrella et al. (2013). Plant Cell /tpc

Supplemental Data. Perrella et al. (2013). Plant Cell /tpc Intensity Intensity Intensity Intensity Intensity Intensity 150 50 150 0 10 20 50 C 150 0 10 20 50 D 0 10 20 Distance (μm) 50 20 40 E 50 F 0 10 20 50 0 15 30 Distance (μm) Supplemental Figure 1: Co-localization

More information

Genome-wide discovery of G-quadruplex forming sequences and their functional

Genome-wide discovery of G-quadruplex forming sequences and their functional *Correspondence and requests for materials should be addressed to R.G. (rohini@nipgr.ac.in) Genome-wide discovery of G-quadruplex forming sequences and their functional relevance in plants Rohini Garg*,

More information

Regulatory Change in YABBY-like Transcription Factor Led to Evolution of Extreme Fruit Size during Tomato Domestication

Regulatory Change in YABBY-like Transcription Factor Led to Evolution of Extreme Fruit Size during Tomato Domestication SUPPORTING ONLINE MATERIALS Regulatory Change in YABBY-like Transcription Factor Led to Evolution of Extreme Fruit Size during Tomato Domestication Bin Cong, Luz Barrero, & Steven Tanksley 1 SUPPORTING

More information

Supplemental Data. Fernández-Calvo et al. Plant Cell. (2011) /tpc

Supplemental Data. Fernández-Calvo et al. Plant Cell. (2011) /tpc Supplemental Data. Fernández-Calvo et al. Plant Cell. (2011). 10.1105/tpc.110.080788 Supplemental Figure S1. Phylogenetic tree of MYC2-related proteins from Arabidopsis and other plants. Phenogram representation

More information

Figure 1. Identification of UGT74E2 as an IBA glycosyltransferase. (A) Relative conversion rates of different plant hormones to their glucosylated

Figure 1. Identification of UGT74E2 as an IBA glycosyltransferase. (A) Relative conversion rates of different plant hormones to their glucosylated Figure 1. Identification of UGT74E2 as an IBA glycosyltransferase. (A) Relative conversion rates of different plant hormones to their glucosylated form by recombinant UGT74E2. The naturally occurring auxin

More information

Supplementary Information

Supplementary Information Supplementary Information Rice APC/C TE controls tillering through mediating the degradation of MONOCULM 1 Qibing Lin 1*, Dan Wang 1*, Hui Dong 2*, Suhai Gu 1, Zhijun Cheng 1, Jie Gong 2, Ruizhen Qin 1,

More information

Supplemental Figure 1: Increased Fe deficiency gene expression in roots of nas4x-2

Supplemental Figure 1: Increased Fe deficiency gene expression in roots of nas4x-2 Supplemental Figure 1: Increased Fe deficiency gene expression in roots of nas4x-2 IRT1, FRO2 and FIT expression levels in roots of the wild-type, nas4x- 1 and nas4x-2, showing that in both nas mutants

More information

** LCA LCN PCA

** LCA LCN PCA % of wild type value % of wild type value a 12 1 8 2 b 12 1 8 2 LCA LCN PCA Col- sod3-1 Supplementary Figure 1 sod3-1 influences cell proliferation. (a) Fifth leaf cell area (LCA) and leaf cell number

More information

Table S1 List of primers used for genotyping and qrt-pcr.

Table S1 List of primers used for genotyping and qrt-pcr. Table S1 List of primers used for genotyping and qrt-pcr. genotyping! allele! ligomer*! 5'-sequence-3'! rice! d10-2! F! TTGGCTTTGCCTCGTTTC!!! R! AGCCTCCACTTGTACTGTG! Arabidopsis! max2-3, max2-4! F! ACTCTCTCCGACCTCCCTGACG!!!

More information

Supplemental Data. Chen and Thelen (2010). Plant Cell /tpc

Supplemental Data. Chen and Thelen (2010). Plant Cell /tpc Supplemental Data. Chen and Thelen (2010). Plant Cell 10.1105/tpc.109.071837 1 C Total 5 kg 20 kg 100 kg Transmission Image 100 kg soluble pdtpi-gfp Plastid (PDH-alpha) Mito (PDH-alpha) GFP Image vector

More information

Computational identification and analysis of MADS box genes in Camellia sinensis

Computational identification and analysis of MADS box genes in Camellia sinensis www.bioinformation.net Hypothesis Volume 11(3) Computational identification and analysis of MADS box genes in Camellia sinensis Madhurjya Gogoi*, Sangeeta Borchetia & Tanoy Bandyopadhyay Department of

More information

. Supplementary Information

. Supplementary Information . Supplementary Information Supplementary Figure S1. Mature embryo sac observations. Supplementary Figure S2. STT observations. Supplementary Figure S3. Comparison of the PTB1 cdna with that of the mutant.

More information

Expression differentiation of CYC-like floral symmetry genes correlated with their protein sequence divergence in Chirita heterotricha (Gesneriaceae)

Expression differentiation of CYC-like floral symmetry genes correlated with their protein sequence divergence in Chirita heterotricha (Gesneriaceae) Dev Genes Evol (2008) 218:341 351 DOI 10.1007/s00427-008-0227-y ORIGINAL ARTICLE Expression differentiation of CYC-like floral symmetry genes correlated with their protein sequence divergence in Chirita

More information

The mode of development in animals and plants is different

The mode of development in animals and plants is different The mode of development in animals and plants is different Outcome of animal embryogenesis is a mini edition of the adult Outcome of plant embryogenesis is a simple structure with -root apical meristem

More information

Flower symmetry and shape in Antirrhinum

Flower symmetry and shape in Antirrhinum Int. J. Dev. Biol. 49: 527-537 (2005) doi: 10.1387/ijdb.041967ja Flower symmetry and shape in ntirrhinum JORGE LMEID*,1,2 and LISETE GLEGO 2 1 Instituto Superior de gronomia (IS), Lisboa, Portugal and

More information

GFP GAL bp 3964 bp

GFP GAL bp 3964 bp Supplemental Data. Møller et al. (2009) Shoot Na + exclusion and increased salinity tolerance engineered by cell type-specific alteration of Na + transport in Arabidopsis Supplemental Figure 1. Salt-sensitive

More information

Bioinformatics tools to analyze complex genomes. Yves Van de Peer Ghent University/VIB

Bioinformatics tools to analyze complex genomes. Yves Van de Peer Ghent University/VIB Bioinformatics tools to analyze complex genomes Yves Van de Peer Ghent University/VIB Detecting colinearity and large-scale gene duplications A 1 2 3 4 5 6 7 8 9 10 11 Speciation/Duplicatio n S1 S2 1

More information

Development 143: doi: /dev : Supplementary information

Development 143: doi: /dev : Supplementary information Supplementary Materials and Methods Plant materials The mutants and transgenic plants used in the present study were as follows: E361 (from Alex Webb s laboratory); tmm-1, ptmm::tmm-gfp and flp-1 (from

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION doi:10.1038/nature12791 Supplementary Figure 1 (1/3) WWW.NATURE.COM/NATURE 1 RESEARCH SUPPLEMENTARY INFORMATION Supplementary Figure 1 (2/3) 2 WWW.NATURE.COM/NATURE SUPPLEMENTARY

More information

Supplementary Information for: The genome of the extremophile crucifer Thellungiella parvula

Supplementary Information for: The genome of the extremophile crucifer Thellungiella parvula Supplementary Information for: The genome of the extremophile crucifer Thellungiella parvula Maheshi Dassanayake 1,9, Dong-Ha Oh 1,9, Jeffrey S. Haas 1,2, Alvaro Hernandez 3, Hyewon Hong 1,4, Shahjahan

More information

State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, Shaanxi, China

State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, Shaanxi, China Molecular cloning and expression of the male sterility-related CtYABBY1 gene in flowering Chinese cabbage (Brassica campestris L. ssp chinensis var. parachinensis) X.L. Zhang 1,2,3 and L.G. Zhang 1,2,3

More information

Is targeted modification of cytokinin regulatory gene activity in Rapid Cycling Brassica rapa an appropriate model for forage brassica, B. napus?

Is targeted modification of cytokinin regulatory gene activity in Rapid Cycling Brassica rapa an appropriate model for forage brassica, B. napus? Is targeted modification of cytokinin regulatory gene activity in Rapid Cycling Brassica rapa an appropriate model for forage brassica, B. napus? P.E. Jameson, D.J. O Keefe and J. Song School of Biological

More information

Biological Roles of Cytokinins

Biological Roles of Cytokinins Direct Control of Shoot Meristem Activity by a Cytokinin-Activating Enzyme By Kurakawa et. Al. Published in Nature Presented by Boyana Grigorova Biological Roles of Cytokinins Cytokinins are positive regulators

More information

Supplementary Figure 1. Phenotype of the HI strain.

Supplementary Figure 1. Phenotype of the HI strain. Supplementary Figure 1. Phenotype of the HI strain. (A) Phenotype of the HI and wild type plant after flowering (~1month). Wild type plant is tall with well elongated inflorescence. All four HI plants

More information

Plant Molecular and Cellular Biology Lecture 10: Plant Cell Cycle Gary Peter

Plant Molecular and Cellular Biology Lecture 10: Plant Cell Cycle Gary Peter Plant Molecular and Cellular Biology Lecture 10: Plant Cell Cycle Gary Peter 9/10/2008 1 Learning Objectives Explain similarities and differences between fungal, mammalian and plant cell cycles Explain

More information

Molecular Genetics of. Plant Development STEPHEN H. HOWELL CAMBRIDGE UNIVERSITY PRESS

Molecular Genetics of. Plant Development STEPHEN H. HOWELL CAMBRIDGE UNIVERSITY PRESS Molecular Genetics of Plant Development STEPHEN H. HOWELL CAMBRIDGE UNIVERSITY PRESS Contents Preface A Word on Genetic Nomenclature page xiii xvii 1 Approaches to the Study of Plant Development 1 Pattern

More information

MAIZE AND SORGHUM. ALMUM SORGHUM, COLUMBUS GRASS (Sorghum almum Parodi)

MAIZE AND SORGHUM. ALMUM SORGHUM, COLUMBUS GRASS (Sorghum almum Parodi) MAIZE AND SORGHUM ALMUM SORGHUM, COLUMBUS GRASS (Sorghum almum Parodi) number # At time of ear emergence - time of ear emergence (first spikelet visible on 50% of plants) - plant: height - leaf: colour

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION doi:10.1038/nature13082 Supplementary Table 1. Examination of nectar production in wild-type and atsweet9 flowers. No. of flowers with detectable nectar out of the total observed

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION doi:10.1038/nature10534 Supplementary Fig. 1. Diagrammatic representation of the N-end rule pathway of targeted proteolysis (after Graciet and Wellmer 2010 9 ). Tertiary, secondary

More information

AUXIN CONJUGATE HYDROLYSIS DURING PLANT-MICROBE INTERACTION AND EVOLUTION

AUXIN CONJUGATE HYDROLYSIS DURING PLANT-MICROBE INTERACTION AND EVOLUTION AUXIN CONJUGATE HYDROLYSIS DURING PLANT-MICROBE INTERACTION AND EVOLUTION J. Ludwig-Müller 1, A. Schuller 1, A.F. Olajide 2, V. Bakllamaja 2, J.J. Campanella 2 ABSTRACT Plants regulate auxin balance through

More information

Three TOB1-related YABBY genes are required to maintain proper function of the spikelet and branch meristems in rice

Three TOB1-related YABBY genes are required to maintain proper function of the spikelet and branch meristems in rice Research Three TOB1-related YABBY genes are required to maintain proper function of the spikelet and branch meristems in rice Wakana Tanaka, Taiyo Toriba and Hiro-Yuki Hirano Department of Biological Sciences,

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION doi:1.138/nature111 cytosol Model: PILS function in cellular auxin homeostasis ER nucleus IAA degradation? sequestration? conjugation? storage? signalling? PILS IAA ER cytosol Supplemental Figure 1 Model

More information

Supplemental Figures. Supplemental Data. Sugliani et al. Plant Cell (2016) /tpc Clades RSH1. Rsh1[HS] RSH2 RSH3. Rsh4[HS] HYD TGS ACT

Supplemental Figures. Supplemental Data. Sugliani et al. Plant Cell (2016) /tpc Clades RSH1. Rsh1[HS] RSH2 RSH3. Rsh4[HS] HYD TGS ACT Supplemental Figures Clades RSH1 TP - HYD TGS ACT Rsh1[HS] RSH2 TP HYD SYN TGS Rsh2[HS] RSH3 TP HYD SYN TGS CRSH TP - SYN EFh Rsh4[HS] Supplemental Figure 1. Arabidopsis RSH domain structure. Schematic

More information

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 Supplementary Figure 1. HSP21 expression in 35S:HSP21 and hsp21 knockdown plants. (a) Since no T- DNA insertion line for HSP21 is available in the publicly available T-DNA collections,

More information

BIOLOGY 317 Spring First Hourly Exam 4/20/12

BIOLOGY 317 Spring First Hourly Exam 4/20/12 Name: Lab sect. (TA name/time): BIOLOGY 317 Spring 2012 First Hourly Exam 4/20/12 1) (24 pts) Match the letter of the family given on the right with the characteristics for a plant described on the left.

More information

Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids

Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids Plant growth conditions The soil was a 1:1 v/v mixture of loamy soil and organic compost. Initial soil water content was determined

More information

A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development

A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development Xuemei Chen Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA. E-mail: xuemei@waksman.rutgers.edu Plant

More information

UNIVERSITY OF YORK BIOLOGY. Developmental Biology

UNIVERSITY OF YORK BIOLOGY. Developmental Biology Examination Candidate Number: UNIVERSITY OF YORK BSc Stage 2 Degree Examinations 2017-18 Department: BIOLOGY Title of Exam: Developmental Biology Desk Number: Time allowed: 1 hour and 30 minutes Total

More information

CEREALS. OATS and NAKED OATS (Avena sativa L. et Avens nuda L)

CEREALS. OATS and NAKED OATS (Avena sativa L. et Avens nuda L) CEREALS OATS and NAKED OATS (Avena sativa L. et Avens nuda L) At earing 4 time of spikelet emergence (first spikelet visible on 50% of panicles) 5 flag leaf: attitude 8 panicle: orientation of branches

More information

Outline. Leaf Development. Leaf Structure - Morphology. Leaf Structure - Morphology

Outline. Leaf Development. Leaf Structure - Morphology. Leaf Structure - Morphology Outline 1. Leaf Structure: Morphology & Anatomy 2. Leaf Development A. Anatomy B. Sector analysis C. Leaf Development Leaf Structure - Morphology Leaf Structure - Morphology 1 Leaf Structure - Morphology

More information

Level 2 Part II. MSU Extension Horticulture Associate Specialist. Pages Montana Master Gardener Handbook

Level 2 Part II. MSU Extension Horticulture Associate Specialist. Pages Montana Master Gardener Handbook Plant Growth and Development Level 2 Part II Toby Day MSU Extension Horticulture Associate Specialist Pages 24-48 Montana Master Gardener Handbook Vegetative parts of a plant Definitions Apical bud or

More information

AtTIL-P91V. AtTIL-P92V. AtTIL-P95V. AtTIL-P98V YFP-HPR

AtTIL-P91V. AtTIL-P92V. AtTIL-P95V. AtTIL-P98V YFP-HPR Online Resource 1. Primers used to generate constructs AtTIL-P91V, AtTIL-P92V, AtTIL-P95V and AtTIL-P98V and YFP(HPR) using overlapping PCR. pentr/d- TOPO-AtTIL was used as template to generate the constructs

More information

Supplementary Methods

Supplementary Methods Supplementary Methods Microarray analysis Grains of 7 DAP of the wild-type and gif1 were harvested for RNA preparation. Microarray analysis was performed with the Affymetrix (Santa Clara, CA) GeneChip

More information

?Annu. Rev. Plant Physiol. Plant Mol. Biol :349 70

?Annu. Rev. Plant Physiol. Plant Mol. Biol :349 70 ?Annu. Rev. Plant Physiol. Plant Mol. Biol. 2000. 51:349 70 Copyright c 2000 by Annual Reviews. All rights reserved asymmetry, axes, embryogenesis, lateral organs, flowers Plant development involves specification

More information

23-. Shoot and root development depend on ratio of IAA/CK

23-. Shoot and root development depend on ratio of IAA/CK Balance of Hormones regulate growth and development Environmental factors regulate hormone levels light- e.g. phototropism gravity- e.g. gravitropism temperature Mode of action of each hormone 1. Signal

More information

Leucine-rich repeat receptor-like kinases (LRR-RLKs), HAESA, ERECTA-family

Leucine-rich repeat receptor-like kinases (LRR-RLKs), HAESA, ERECTA-family Leucine-rich repeat receptor-like kinases (LRR-RLKs), HAESA, ERECTA-family GENES & DEVELOPMENT (2000) 14: 108 117 INTRODUCTION Flower Diagram INTRODUCTION Abscission In plant, the process by which a plant

More information

Developmental Biology

Developmental Biology Developmental Biology 332 (2009) 25 35 Contents lists available at ScienceDirect Developmental Biology journal homepage: www.elsevier.com/developmentalbiology Review Old dogs, new tricks: Regulatory evolution

More information

Prospecting for Green Revolution Genes

Prospecting for Green Revolution Genes Learning Objectives: Prospecting for Green Revolution Genes 1) Discover how changes in individual genes produce phenotypic change 2) Learn to apply bioinformatics tools to identify groups of related genes

More information

Functional Conservation between CRABS CLAW Orthologues from Widely Diverged Angiosperms

Functional Conservation between CRABS CLAW Orthologues from Widely Diverged Angiosperms Annals of Botany 100: 651 657, 2007 doi:10.1093/aob/mcm136, available online at www.aob.oxfordjournals.org Functional Conservation between CRABS CLAW Orthologues from Widely Diverged Angiosperms CHLOE

More information

PLANTS FORM AND FUNCTION PLANT MORPHOLOGY PART I: BASIC MORPHOLOGY. Plant Form & Function Activity #1 page 1

PLANTS FORM AND FUNCTION PLANT MORPHOLOGY PART I: BASIC MORPHOLOGY. Plant Form & Function Activity #1 page 1 AP BIOLOGY PLANTS FORM AND FUNCTION ACTIVITY #1 NAME DATE HOUR PLANT MORPHOLOGY PART I: BASIC MORPHOLOGY Plant Form & Function Activity #1 page 1 PART II: ROOTS 1. Examine the examples of the two root

More information

Nature Genetics: doi: /ng Supplementary Figure 1. The FIN and FAB genes act separately from the meristem maturation pathway.

Nature Genetics: doi: /ng Supplementary Figure 1. The FIN and FAB genes act separately from the meristem maturation pathway. Supplementary Figure 1 The FIN and FAB genes act separately from the meristem maturation pathway. (a) Representative inflorescence from the compound inflorescence (s, defective in the homolog of Arabidopsis

More information

The unfolding drama of flower development:

The unfolding drama of flower development: REVIEW The unfolding drama of flower development: recent results from genetic and molecular analyses Hong Ma Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724-2212 USA There has been an

More information

From basic research to crop improvement. Dirk Inze VIB-UGent Center for Plant Systems Biology

From basic research to crop improvement. Dirk Inze VIB-UGent Center for Plant Systems Biology From basic research to crop improvement Dirk Inze VIB-UGent Center for Plant Systems Biology Oct 2017 The Great Challenge By 2050 70% more food on the same land area Growing world population Climate change

More information

EXPRESSION OF THE FIS2 PROMOTER IN ARABIDOPSIS THALIANA

EXPRESSION OF THE FIS2 PROMOTER IN ARABIDOPSIS THALIANA EXPRESSION OF THE FIS2 PROMOTER IN ARABIDOPSIS THALIANA Item Type text; Electronic Thesis Authors Bergstrand, Lauren Janel Publisher The University of Arizona. Rights Copyright is held by the author. Digital

More information

Divergent Regulatory OsMADS2 Functions Control Size, Shape and Differentiation of the Highly Derived Rice Floret Second-Whorl Organ

Divergent Regulatory OsMADS2 Functions Control Size, Shape and Differentiation of the Highly Derived Rice Floret Second-Whorl Organ Copyright Ó 2007 by the Genetics Society of America DOI: 10.1534/genetics.107.071746 Divergent Regulatory OsMADS2 Functions Control Size, Shape and Differentiation of the Highly Derived Rice Floret Second-Whorl

More information

Supplemental Data. Gao et al. (2012). Plant Cell /tpc

Supplemental Data. Gao et al. (2012). Plant Cell /tpc Supplemental Figure 1. Plant EMP Proteins. (A) The Accession numbers of the 12 EMP members from Arabidopsis. (B) Phylogenetic analysis of EMP proteins from Arabidopsis, human and yeast using the Mac Vector

More information

Linking floral symmetry genes to breeding system evolution

Linking floral symmetry genes to breeding system evolution Opinion TRENDS in Plant Science Vol.11 No.12 Linking floral symmetry genes to breeding system evolution Susan Kalisz 1, Richard H. Ree 2 and Risa D. Sargent 3 1 Department of Biological Sciences, University

More information

Arabidopsis BRANCHED1 Acts as an Integrator of Branching Signals within Axillary Buds W

Arabidopsis BRANCHED1 Acts as an Integrator of Branching Signals within Axillary Buds W The Plant Cell, Vol. 19: 458 472, February 2007, www.plantcell.org ª 2007 American Society of Plant Biologists Arabidopsis BRANCHED1 Acts as an Integrator of Branching Signals within Axillary Buds W José

More information

Plant Development. Chapter 31 Part 1

Plant Development. Chapter 31 Part 1 Plant Development Chapter 31 Part 1 Impacts, Issues Foolish Seedlings, Gorgeous Grapes Gibberellin and other plant hormones control the growth and development of plants environmental cues influence hormone

More information

Miloš Duchoslav and Lukáš Fischer *

Miloš Duchoslav and Lukáš Fischer * Duchoslav and Fischer BMC Plant Biology (2015) 15:133 DOI 10.1186/s12870-015-0523-4 RESEARCH ARTICLE Open Access Parallel subfunctionalisation of PsbO protein isoforms in angiosperms revealed by phylogenetic

More information

Control of corolla monosymmetry in the Brassicaceae Iberis amara

Control of corolla monosymmetry in the Brassicaceae Iberis amara Control of corolla monosymmetry in the Brassicaceae Iberis amara Andrea Busch* and Sabine Zachgo* *Max Planck Institute for Plant Breeding Research, Carl-von-Linné Weg 10, 50829 Köln, Germany; and Department

More information

Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis

Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis Stirnberg et al. BMC Plant Biology 2012, 12:160 RESEARCH ARTICLE Mutation of the cytosolic ribosomal protein-encoding RPS10B gene affects shoot meristematic function in Arabidopsis Petra Stirnberg 1, Jin-Ping

More information

Divergent regulatory OsMADS2 functions control size, shape and differentiation of

Divergent regulatory OsMADS2 functions control size, shape and differentiation of Genetics: Published Articles Ahead of Print, published on April 3, 2007 as 10.1534/genetics.107.071746 Divergent regulatory OsMADS2 functions control size, shape and differentiation of the highly derived

More information

This article was originally published in a journal published by Elsevier, and the attached copy is provided by Elsevier for the author s benefit and for the benefit of the author s institution, for non-commercial

More information

Plant Growth and Development

Plant Growth and Development Plant Growth and Development Concept 26.1 Plants Develop in Response to the Environment Factors involved in regulating plant growth and development: 1. Environmental cues (e.g., day length) 2. Receptors

More information

Functional diversification of duplicated CYC2 clade genes in regulation of. inflorescence development in Gerbera hybrida (Asteraceae)

Functional diversification of duplicated CYC2 clade genes in regulation of. inflorescence development in Gerbera hybrida (Asteraceae) Page 1 of 56 1 Functional diversification of duplicated CYC2 clade genes in regulation of inflorescence development in Gerbera hybrida (Asteraceae) Inka Juntheikki-Palovaara 1*, Sari Tähtiharju 1*, Tianying

More information

The Balance between the MIR164A and CUC2 Genes Controls Leaf Margin Serration in Arabidopsis W

The Balance between the MIR164A and CUC2 Genes Controls Leaf Margin Serration in Arabidopsis W The Plant Cell, Vol. 18, 2929 2945, November 2006, www.plantcell.org ª 2006 American Society of Plant Biologists The Balance between the MIR164A and CUC2 Genes Controls Leaf Margin Serration in Arabidopsis

More information

Supplemental Figure 1. Phenotype of ProRGA:RGAd17 plants under long day

Supplemental Figure 1. Phenotype of ProRGA:RGAd17 plants under long day Supplemental Figure 1. Phenotype of ProRGA:RGAd17 plants under long day conditions. Photo was taken when the wild type plant started to bolt. Scale bar represents 1 cm. Supplemental Figure 2. Flowering

More information

I. GREGOR MENDEL - father of heredity

I. GREGOR MENDEL - father of heredity GENETICS: Mendel Background: Students know that Meiosis produces 4 haploid sex cells that are not identical, allowing for genetic variation. Essential Question: What are two characteristics about Mendel's

More information

Lotus Flower. Lotus Flower Seeds OBJECTIVES SOMETHING TO SPROUT ABOUT. Something to Sprout About Grades 3 rd 5 th

Lotus Flower. Lotus Flower Seeds OBJECTIVES SOMETHING TO SPROUT ABOUT. Something to Sprout About Grades 3 rd 5 th CHECK WITH TEACHER TO MAKE SURE THERE ARE TRAYS TO GO UNDER PLANTING CUPS. OBJECTIVES SOMETHING TO SPROUT ABOUT Ppt 2 * Poster in the bag State the objectives. And tell students you will be asking them

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION Figure S1. Haploid plant produced by centromere-mediated genome elimination Chromosomes containing altered CENH3 in their centromeres (green dots) are eliminated after fertilization in a cross to wild

More information

Epigenetics and Flowering Any potentially stable and heritable change in gene expression that occurs without a change in DNA sequence

Epigenetics and Flowering Any potentially stable and heritable change in gene expression that occurs without a change in DNA sequence Epigenetics and Flowering Any potentially stable and heritable change in gene expression that occurs without a change in DNA sequence www.plantcell.org/cgi/doi/10.1105/tpc.110.tt0110 Epigenetics Usually

More information

Plant Structure, Growth, and Development

Plant Structure, Growth, and Development Plant Structure, Growth, and Development Plant hierarchy: Cells Tissue: group of similar cells with similar function: Dermal, Ground, Vascular Organs: multiple kinds of tissue, very diverse function Organ

More information

Leaf and Internode. Introduction. Parts of the Monocot and Dicot Leaf. Introductory article

Leaf and Internode. Introduction. Parts of the Monocot and Dicot Leaf. Introductory article Andrew Hudson, University of Edinburgh, Edinburgh, UK Christopher Jeffree, University of Edinburgh, Edinburgh, UK Leaves of different species show wide variation in morphology and anatomy, usually associated

More information

DEVELOPMENTAL GENETICS OF ARABIDOPSIS THALIANA

DEVELOPMENTAL GENETICS OF ARABIDOPSIS THALIANA DEVELOPMENTAL GENETICS OF ARABIDOPSIS THALIANA CHASE BALLARD LINDA EAN HECTOR LOPEZ DR. JOANNA WERNER-FRACZEK IN COLLABORATION WITH DR. PATRICIA SPRINGER S LAB AT UCR AND ROBERT KOBLE PURPOSE OF RESEARCH

More information

** * * * Col-0 cau1 CAU1. Actin2 CAS. Actin2. Supplemental Figure 1. CAU1 affects calcium accumulation.

** * * * Col-0 cau1 CAU1. Actin2 CAS. Actin2. Supplemental Figure 1. CAU1 affects calcium accumulation. Ca 2+ ug g -1 DW Ca 2+ ug g -1 DW Ca 2+ ug g -1 DW Supplemental Data. Fu et al. Plant Cell. (213). 1.115/tpc.113.113886 A 5 4 3 * Col- cau1 B 4 3 2 Col- cau1 ** * * ** C 2 1 25 2 15 1 5 Shoots Roots *

More information

TEOSINTE BRANCHED1 Regulates Inflorescence Architecture and Development in Bread Wheat (Triticum aestivum L.)

TEOSINTE BRANCHED1 Regulates Inflorescence Architecture and Development in Bread Wheat (Triticum aestivum L.) Plant Cell Advance Publication. Published on February 14, 2018, doi:10.1105/tpc.17.00961 RESEARCH ARTICLE TEOSINTE BRANCHED1 Regulates Inflorescence Architecture and Development in Bread Wheat (Triticum

More information

Photoreceptor Regulation of Constans Protein in Photoperiodic Flowering

Photoreceptor Regulation of Constans Protein in Photoperiodic Flowering Photoreceptor Regulation of Constans Protein in Photoperiodic Flowering by Valverde et. Al Published in Science 2004 Presented by Boyana Grigorova CBMG 688R Feb. 12, 2007 Circadian Rhythms: The Clock Within

More information

AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2. thaliana. regulate senescence and floral organ abscission in Arabidopsis.

AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2. thaliana. regulate senescence and floral organ abscission in Arabidopsis. Research article 4563 AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana Christine M. Ellis 1, Punita Nagpal 1, Jeffery C. Young 3,

More information

DNA or RNA metabolism (1%) Signal transduction (2%) Development (2%) Other cellular processes (17%)

DNA or RNA metabolism (1%) Signal transduction (2%) Development (2%) Other cellular processes (17%) Fig. 35-24 Other metabolism (18%) DNA or RNA metabolism (1%) Signal transduction (2%) Development (2%) Unknown (24%) Energy pathways (3%) Cell division and organization (3%) Transport (4%) Transcription

More information

Control of cell and petal morphogenesis by R2R3 MYB transcription factors

Control of cell and petal morphogenesis by R2R3 MYB transcription factors RESEARCH ARTICLE 1691 Development 134, 1691-1701 (2007) doi:10.1242/dev.02836 Control of cell and petal morphogenesis by R2R3 MYB transcription factors Kim Baumann 1, Maria Perez-Rodriguez 1,2, Desmond

More information

75 Development of floral organ identity: stories from the MADS house Günter Theißen Recent studies on AGAMOUS-LIKE2-, DEFICIENS- and GLOBOSA-like MADS

75 Development of floral organ identity: stories from the MADS house Günter Theißen Recent studies on AGAMOUS-LIKE2-, DEFICIENS- and GLOBOSA-like MADS 75 Development of floral organ identity: stories from the MADS house Günter Theißen Recent studies on AGAMOUS-LIKE2-, DEFICIENS- and GLOBOSA-like MADS-box genes in diverse seed plant species have provided

More information

Supporting Online Material for

Supporting Online Material for Supporting Online Material for Synchronization of the flowering transition by the tomato TERMINATING FLOWER gene. Cora A. MacAlister 1, Soon Ju Park 1, Ke Jiang 1, Fabien Marcel 2, Abdelhafid Bendahmane

More information

Ethylene is critical to the maintenance of primary root growth and Fe. homeostasis under Fe stress in Arabidopsis

Ethylene is critical to the maintenance of primary root growth and Fe. homeostasis under Fe stress in Arabidopsis Ethylene is critical to the maintenance of primary root growth and Fe homeostasis under Fe stress in Arabidopsis Guangjie Li, Weifeng Xu, Herbert J. Kronzucker, Weiming Shi * Supplementary Data Supplementary

More information

Slovene Plant Gene Bank (SPGB) and Genetic Resources Programme

Slovene Plant Gene Bank (SPGB) and Genetic Resources Programme Slovene Plant Gene Bank (SPGB) and Genetic Resources Programme Second Meeting of the ECPGR Working Group on Leafy Vegetables 8 9 October, Ljubljana, Slovenia Vladimir MEGLIČ, Jelka ŠUŠTAR VOZLIČ Slovene

More information

Basal angiosperms, and plant breeding systems. Angiosperm phylogeny

Basal angiosperms, and plant breeding systems. Angiosperm phylogeny Basal angiosperms, and plant breeding systems Angiosperm phylogeny Soltis et al., 2011 Ranunculaceae' Monocots' Magnoliids' ANITA'grade' Basal angiosperms Angiosperm phylogeny A N A ANITA grade Amborella

More information

Characterisation of abiotic stress inducible plant promoters and bacterial genes for osmotolerance using transgenic approach

Characterisation of abiotic stress inducible plant promoters and bacterial genes for osmotolerance using transgenic approach Characterisation of abiotic stress inducible plant promoters and bacterial genes for osmotolerance using transgenic approach ABSTRACT SUBMITTED TO JAMIA MILLIA ISLAMIA NEW DELHI IN PARTIAL FULFILMENT OF

More information

Genome-wide analysis of TCP family in tobacco

Genome-wide analysis of TCP family in tobacco Genome-wide analysis of TCP family in tobacco L. Chen 1,2, Y.Q. Chen 3, A.M. Ding 1, H. Chen 1,2, F. Xia 1,2, W.F. Wang 1,2 and Y.H. Sun 1 1 Key Laboratory for Tobacco Gene Resources, Tobacco Research

More information

Basal angiosperms, and plant breeding systems Today s lecture

Basal angiosperms, and plant breeding systems Today s lecture Basal angiosperms, and plant breeding systems Today s lecture Nymphaeaceae Magnoliaceae Ranunculaceae Video Breeding systems Class exercise Angiosperm phylogeny Soltis et al., 2011 Ranunculaceae' Monocots'

More information